Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Reverse (-)

40991788 .. 40993529

Gene Structure 1742 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG161200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGTGATGGTTAAGATTATATTTTTCGTCATTTTGGTGTTCCTTGTGGACATGAGGTTGTATTCAAACATGGCCAGTGGTCTCAAGTTAATATTCTTGATAGTCTTATCAAGCCTGTGGAGTTGCCATGCTGCTGCAAGCAGGGATACGCTGAAACCAGGTGACACTCTCAATTCGTCCAGTTTCTTAGTTTCTTCAAATGGCAAGTTTACTTTTGGCTTCGTTGTGTTTGACCACTTTGACAAAACCAACTCCAACTCCTCCTACCTTAGTATCCGTTGGGAGAACAGTCCGAATGGCGCTTGGATTGCCAACCGAGACGCGCCTATTTTGTACCCTTCAGGTGTTCTTACCCTGGACAAGAACAAAACCTTAAAAATTACACACACAGGGGGTGATCCTCTGGTCCTCTACTCAGCTGCTGCTTCAGAAATTACCTACAGTAGTAACCCTAGTACTTTTGTGGCTACCCTGTTGGATTCGGGCAATTTTATCCTACAAGAGGTGAACTCAGATGGATCAACGAAGCAACTGCTGTGGCAAAGTTTCGATTATCCTGGGGACACCCTTTTGCCAGGTATGAAGTTAGGTGTTAAACATACAACTGGTCACATTTGGTCGCTTTCATCATGGTTAACCGAGAACAGCCCTGAGCGAGGGGCTTTTACCCTTGATTGGGAACCTGAGGGACATGAATTGAAAATTAAGCGACGAGGGGTGGTTTACTGGTCTAGTGGAGTCTTCAGAAATAAGAGATTTCAATTCATTCTACCGCAGGGATCGAAGCACCTCAGGTACAACTTTAGCTTTGTCTCAAATGAGAATGAAGACTACTTCACTTATACTAGGATATTAGATGATGATGATCATGATCAAAGTGATGAAGTATCAGAATGGGTGCTAACATCATTGGGACGACTATTGGACTTGAGATCAGAAGTTGATATTGCACGAGCAGATAACTGTTATGGCTATAACACTCCTAATGATGGGTGCCAAACATGGCGGCAACCAAGTTGCAGGCATTTGGACAATACATTTGAGGAAGGAAATGGTTATTTTGATACAACCACCATCTCTAATGCAACAACAAGTAGTGATCCGAATACAAGTCTCAGCACTAGTGATTGTAAGGCTGCTTGTTGGGAAAATTGTGACTGTGTTGGATTCAACTTTCTATTTGATAATCAGACTGGATGCAAGTTTTGGAAGGGAAACTGGGAGTTCACTCAAGGCCTCTCTGGTTATAGTAGTTCAACTAATCTCTATTTTCTAACAACAAAAATATCTCCCAGTGGTGCAAACAAGAGGCTTCGTCCCATCATTATCGTTGCTGTAGTTGGTATAGTGGTTCTTTTACTGCTTTGCATCGTCTGGTTTGGTTTAAGAAGGAAATCTGCAATTTCAGGTAGACAATTCTTTAACCACAACTTAATTATTAGTGTGAACCTGTTAGGTAGACTGAATTTAAGATCTTTGGCAACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

496

Amino Acids

55.68

Weight (kDa)

6.37

Isoelectric Point (pI)

36.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	102 - 211	3.5e-25	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	993
AccI	GTMKAC	2 cut(s)	1411, 1459
AccII	CGCG	1 cut(s)	323
AciI	CCGC	2 cut(s)	773, 1006
AclWI	GGATC	4 cut(s)	392, 526, 787, 1094
AcoI	YGGCCR	1 cut(s)	72
AcsI	RAATTY	1 cut(s)	1465
AcuI	CTGAAG	3 cut(s)	324, 411, 727
AfaI	GTAC	3 cut(s)	335, 457, 797
AfiI	CCNNNNNNNGG	5 cut(s)	502, 656, 675, 676, 989
AgsI	TTSAA	6 cut(s)	66, 198, 700, 761, 1171, 1257
AhlI	ACTAGT	1 cut(s)	1121
AjnI	CCWGG	4 cut(s)	157, 354, 556, 574
AluBI	AGCT	2 cut(s)	419, 807
AluI	AGCT	2 cut(s)	419, 807
Alw26I	GTCTC	4 cut(s)	86, 312, 817, 1118
AlwI	GGATC	4 cut(s)	392, 526, 787, 1094
AlwNI	CAGNNNCTG	1 cut(s)	422
AoxI	GGCC	2 cut(s)	72, 1234
ApeKI	GCWGC	5 cut(s)	131, 134, 419, 422, 1136
ApoI	RAATTY	1 cut(s)	1465
ArsI	GACNNNNNNTTYG	2 cut(s)	1022, 1054
AspLEI	GCGC	2 cut(s)	302, 325
AspS9I	GGNCC	1 cut(s)	406
AsuHPI	GGTGA	4 cut(s)	16, 173, 407, 517
AvaII	GGWCC	1 cut(s)	406
AxyI	CCTNAGG	2 cut(s)	684, 791
BaeI	ACNNNNGTAYC	2 cut(s)	256, 289
BalI	TGGCCA	1 cut(s)	74
BanI	GGYRCC	1 cut(s)	993
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	2 cut(s)	733, 834
BbvI	GCAGC	5 cut(s)	118, 121, 406, 409, 1123
BccI	CCATC	4 cut(s)	509, 983, 1082, 1328
BcgI	CGANNNNNNTGC	2 cut(s)	514, 548
BciT130I	CCWGG	4 cut(s)	159, 356, 558, 576
BciVI	GTATCC	2 cut(s)	139, 284
BclI	TGATCA	2 cut(s)	865, 871
BcoDI	GTCTC	4 cut(s)	86, 312, 817, 1118
BcuI	ACTAGT	1 cut(s)	1121
BfaI	CTAG	4 cut(s)	453, 732, 846, 1122
BfmI	CTRYAG	2 cut(s)	439, 1335
BfoI	RGCGCY	1 cut(s)	303
BfuI	GTATCC	2 cut(s)	139, 284
BglII	AGATCT	1 cut(s)	1472
BisI	GCNGC	6 cut(s)	132, 135, 420, 423, 1007, 1137
BlsI	GCNGC	6 cut(s)	133, 136, 421, 424, 1008, 1138
BmcAI	AGTACT	1 cut(s)	457
Bme1390I	CCNGG	4 cut(s)	159, 356, 558, 576
Bme18I	GGWCC	1 cut(s)	406
BmgT120I	GGNCC	1 cut(s)	406
BmiI	GGNNCC	2 cut(s)	681, 995
BmrFI	CCNGG	4 cut(s)	159, 356, 558, 576
BmrI	ACTGGG	2 cut(s)	1228, 1287
BmsI	GCATC	2 cut(s)	1187, 1377
BmuI	ACTGGG	2 cut(s)	1228, 1287
BpiI	GAAGAC	2 cut(s)	733, 834
BplI	GAGNNNNNCTC	2 cut(s)	494, 526
Bpu10I	CCTNAGC	1 cut(s)	651
BpuEI	CTTGAG	3 cut(s)	68, 949, 1215
BsaBI	GATNNNNATC	2 cut(s)	864, 870
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	2 cut(s)	354, 557
BsaXI	ACNNNNNCTCC	2 cut(s)	242, 272
Bsc4I	CCNNNNNNNGG	5 cut(s)	502, 656, 675, 676, 989
Bse1I	ACTGG	7 cut(s)	75, 180, 610, 731, 1198, 1223, 1293
Bse21I	CCTNAGG	2 cut(s)	684, 791
Bse8I	GATNNNNATC	2 cut(s)	864, 870
BseBI	CCWGG	4 cut(s)	159, 356, 558, 576
BseDI	CCNNGG	2 cut(s)	354, 557
BseGI	GGATG	1 cut(s)	1202
BseJI	GATNNNNATC	2 cut(s)	864, 870
BseLI	CCNNNNNNNGG	5 cut(s)	502, 656, 675, 676, 989
BseMII	CTCAG	6 cut(s)	429, 525, 642, 675, 805, 1129
BseNI	ACTGG	7 cut(s)	75, 180, 610, 731, 1198, 1223, 1293
BseRI	GAGGAG	1 cut(s)	250
BseXI	GCAGC	5 cut(s)	118, 121, 406, 409, 1123
Bsh1236I	CGCG	1 cut(s)	323
BshFI	GGCC	2 cut(s)	74, 1236
BshNI	GGYRCC	1 cut(s)	993
BslFI	GGGAC	4 cut(s)	575, 702, 927, 1302
BslI	CCNNNNNNNGG	5 cut(s)	502, 656, 675, 676, 989
BsmAI	GTCTC	4 cut(s)	86, 312, 817, 1118
BsmBI	CGTCTC	1 cut(s)	312
BsmFI	GGGAC	4 cut(s)	575, 702, 927, 1302
BsnI	GGCC	2 cut(s)	74, 1236
Bso31I	GGTCTC	1 cut(s)	86
Bsp143I	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
BspACI	CCGC	2 cut(s)	773, 1006
BspANI	GGCC	2 cut(s)	74, 1236
BspCNI	CTCAG	6 cut(s)	428, 524, 643, 676, 804, 1128
BspFNI	CGCG	1 cut(s)	323
BspHI	TCATGA	1 cut(s)	868
BspLI	GGNNCC	2 cut(s)	681, 995
BspPI	GGATC	4 cut(s)	392, 526, 787, 1094
BspT107I	GGYRCC	1 cut(s)	993
BspTNI	GGTCTC	1 cut(s)	86
BsrI	ACTGG	7 cut(s)	75, 180, 610, 731, 1198, 1223, 1293
BssECI	CCNNGG	2 cut(s)	354, 557
BssMI	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
BssSI	CACGAG	1 cut(s)	951
Bst2BI	CACGAG	1 cut(s)	951
Bst2UI	CCWGG	4 cut(s)	159, 356, 558, 576
Bst4CI	ACNGT	4 cut(s)	290, 443, 965, 1160
BstC8I	GCNNGC	2 cut(s)	139, 1022
BstDEI	CTNAG	8 cut(s)	187, 269, 415, 511, 651, 684, 791, 1115
BstENI	CCTNNNNNAGG	2 cut(s)	500, 654
BstF5I	GGATG	1 cut(s)	1202
BstFNI	CGCG	1 cut(s)	323
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	2 cut(s)	302, 325
BstKTI	GATC	8 cut(s)	400, 521, 782, 868, 874, 935, 1102, 1475
BstMAI	GTCTC	4 cut(s)	86, 312, 817, 1118
BstMBI	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
BstMWI	GCNNNNNNNGC	1 cut(s)	308
BstNI	CCWGG	4 cut(s)	159, 356, 558, 576
BstSCI	CCNGG	4 cut(s)	157, 354, 556, 574
BstSFI	CTRYAG	2 cut(s)	439, 1335
BstUI	CGCG	1 cut(s)	323
BstV1I	GCAGC	5 cut(s)	118, 121, 406, 409, 1123
BstV2I	GAAGAC	2 cut(s)	733, 834
BstX2I	RGATCY	1 cut(s)	1472
BstYI	RGATCY	1 cut(s)	1472
Bsu36I	CCTNAGG	2 cut(s)	684, 791
BsuI	GTATCC	2 cut(s)	139, 284
BsuRI	GGCC	2 cut(s)	74, 1236
BtsCI	GGATG	1 cut(s)	1202
BtsIMutI	CAGTG	2 cut(s)	82, 1300
Cac8I	GCNNGC	2 cut(s)	139, 1022
CaiI	CAGNNNCTG	1 cut(s)	422
CciI	TCATGA	1 cut(s)	868
CfoI	GCGC	2 cut(s)	302, 325
Cfr13I	GGNCC	1 cut(s)	406
CseI	GACGC	1 cut(s)	329
CsiI	ACCWGGT	1 cut(s)	157
Csp6I	GTAC	3 cut(s)	334, 456, 796
CspCI	CAANNNNNGTGG	2 cut(s)	518, 553
CviAII	CATG	7 cut(s)	52, 70, 128, 630, 692, 869, 1002
CviQI	GTAC	3 cut(s)	334, 456, 796
DdeI	CTNAG	8 cut(s)	187, 269, 415, 511, 651, 684, 791, 1115
DpnI	GATC	8 cut(s)	399, 520, 781, 867, 873, 934, 1101, 1474
DpnII	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
EaeI	YGGCCR	1 cut(s)	72
Eco147I	AGGCCT	1 cut(s)	1236
Eco31I	GGTCTC	1 cut(s)	86
Eco47I	GGWCC	1 cut(s)	406
Eco57I	CTGAAG	3 cut(s)	324, 411, 727
Eco81I	CCTNAGG	2 cut(s)	684, 791
EcoNI	CCTNNNNNAGG	2 cut(s)	500, 654
EcoRII	CCWGG	4 cut(s)	157, 354, 556, 574
Esp3I	CGTCTC	1 cut(s)	312
FaeI	CATG	7 cut(s)	55, 73, 131, 633, 695, 872, 1005
FaqI	GGGAC	4 cut(s)	575, 702, 927, 1302
FatI	CATG	7 cut(s)	51, 69, 127, 629, 691, 868, 1001
FbaI	TGATCA	2 cut(s)	865, 871
FblI	GTMKAC	2 cut(s)	1411, 1459
Fnu4HI	GCNGC	6 cut(s)	132, 135, 420, 423, 1007, 1137
FokI	GGATG	1 cut(s)	1209
Fsp4HI	GCNGC	6 cut(s)	132, 135, 420, 423, 1007, 1137
FspBI	CTAG	4 cut(s)	453, 732, 846, 1122
GlaI	GCGC	2 cut(s)	301, 324
GluI	GCNGC	6 cut(s)	132, 135, 420, 423, 1007, 1137
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	2 cut(s)	74, 1236
HgaI	GACGC	1 cut(s)	329
HhaI	GCGC	2 cut(s)	302, 325
Hin1II	CATG	7 cut(s)	55, 73, 131, 633, 695, 872, 1005
Hin6I	GCGC	2 cut(s)	300, 323
HinP1I	GCGC	2 cut(s)	300, 323
HincII	GTYRAC	1 cut(s)	636
HindII	GTYRAC	1 cut(s)	636
HinfI	GANTC	3 cut(s)	479, 738, 1167
HpaI	GTTAAC	1 cut(s)	636
HphI	GGTGA	4 cut(s)	16, 173, 407, 517
Hpy166II	GTNNAC	9 cut(s)	49, 210, 508, 636, 724, 1227, 1412, 1447, 1460
Hpy188I	TCNGA	8 cut(s)	294, 430, 514, 746, 892, 937, 1104, 1191
Hpy188III	TCNNGA	2 cut(s)	97, 869
Hpy8I	GTNNAC	9 cut(s)	49, 210, 508, 636, 724, 1227, 1412, 1447, 1460
Hpy99I	CGWCG	1 cut(s)	714
HpyAV	CCTTC	4 cut(s)	348, 1040, 1204, 1383
HpyCH4III	ACNGT	4 cut(s)	290, 443, 965, 1160
HpyCH4V	TGCA	8 cut(s)	137, 950, 1020, 1085, 1200, 1301, 1368, 1400
HpyF10VI	GCNNNNNNNGC	1 cut(s)	308
HpyF3I	CTNAG	8 cut(s)	187, 269, 415, 511, 651, 684, 791, 1115
Hsp92II	CATG	7 cut(s)	55, 73, 131, 633, 695, 872, 1005
HspAI	GCGC	2 cut(s)	300, 323
Ksp22I	TGATCA	2 cut(s)	865, 871
KspAI	GTTAAC	1 cut(s)	636
Kzo9I	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
Lsp1109I	GCAGC	5 cut(s)	118, 121, 406, 409, 1123
LweI	GCATC	2 cut(s)	1187, 1377
MabI	ACCWGGT	1 cut(s)	157
MaeI	CTAG	4 cut(s)	453, 732, 846, 1122
MaeIII	GTNAC	4 cut(s)	161, 446, 608, 1154
MalI	GATC	8 cut(s)	399, 520, 781, 867, 873, 934, 1101, 1474
MboI	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
MboII	GAAGA	3 cut(s)	186, 733, 839
MflI	RGATCY	1 cut(s)	1472
MlsI	TGGCCA	1 cut(s)	74
MluNI	TGGCCA	1 cut(s)	74
MlyI	GAGTC	1 cut(s)	747
MmeI	TCCRAC	3 cut(s)	279, 456, 1144
Mox20I	TGGCCA	1 cut(s)	74
MscI	TGGCCA	1 cut(s)	74
MslI	CAYNNNNRTG	1 cut(s)	35
Msp20I	TGGCCA	1 cut(s)	74
MspA1I	CMGCKG	1 cut(s)	419
MspR9I	CCNGG	4 cut(s)	159, 356, 558, 576
MvaI	CCWGG	4 cut(s)	159, 356, 558, 576
MvnI	CGCG	1 cut(s)	323
MwoI	GCNNNNNNNGC	1 cut(s)	308
NdeII	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
NlaIII	CATG	7 cut(s)	55, 73, 131, 633, 695, 872, 1005
NlaIV	GGNNCC	2 cut(s)	681, 995
NmuCI	GTSAC	3 cut(s)	161, 608, 1154
PagI	TCATGA	1 cut(s)	868
PceI	AGGCCT	1 cut(s)	1236
PfeI	GAWTC	2 cut(s)	479, 1167
PkrI	GCNGC	6 cut(s)	133, 136, 421, 424, 1008, 1138
PleI	GAGTC	1 cut(s)	746
PpsI	GAGTC	1 cut(s)	746
Psp6I	CCWGG	4 cut(s)	157, 354, 556, 574
PspGI	CCWGG	4 cut(s)	157, 354, 556, 574
PspN4I	GGNNCC	2 cut(s)	681, 995
PspPI	GGNCC	1 cut(s)	406
PstNI	CAGNNNCTG	1 cut(s)	422
PsuI	RGATCY	1 cut(s)	1472
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	3 cut(s)	335, 457, 797
RsaNI	GTAC	3 cut(s)	334, 456, 796
RseI	CAYNNNNRTG	1 cut(s)	35
SatI	GCNGC	6 cut(s)	132, 135, 420, 423, 1007, 1137
Sau3AI	GATC	8 cut(s)	397, 518, 779, 865, 871, 932, 1099, 1472
Sau96I	GGNCC	1 cut(s)	406
ScaI	AGTACT	1 cut(s)	457
SchI	GAGTC	1 cut(s)	747
ScrFI	CCNGG	4 cut(s)	159, 356, 558, 576
SexAI	ACCWGGT	1 cut(s)	157
SfaNI	GCATC	2 cut(s)	1187, 1377
SfcI	CTRYAG	2 cut(s)	439, 1335
SinI	GGWCC	1 cut(s)	406
SmiMI	CAYNNNNRTG	1 cut(s)	35
SmlI	CTYRAG	3 cut(s)	83, 928, 1230
SmoI	CTYRAG	3 cut(s)	83, 928, 1230
SpeI	ACTAGT	1 cut(s)	1121
SseBI	AGGCCT	1 cut(s)	1236
SsiI	CCGC	2 cut(s)	773, 1006
SspI	AATATT	1 cut(s)	93
SspMI	CTAG	4 cut(s)	453, 732, 846, 1122
StuI	AGGCCT	1 cut(s)	1236
StyD4I	CCNGG	4 cut(s)	157, 354, 556, 574
TaaI	ACNGT	4 cut(s)	290, 443, 965, 1160
TaqI	TCGA	2 cut(s)	549, 782
TatI	WGTACW	1 cut(s)	455
TauI	GCSGC	1 cut(s)	1009
TfiI	GAWTC	2 cut(s)	479, 1167
TscAI	CASTG	2 cut(s)	82, 1300
TseFI	GTSAC	3 cut(s)	161, 608, 1154
TseI	GCWGC	5 cut(s)	131, 134, 419, 422, 1136
Tsp45I	GTSAC	3 cut(s)	161, 608, 1154
TspDTI	ATGAA	6 cut(s)	596, 615, 708, 754, 840, 897
TspGWI	ACGGA	1 cut(s)	266
TspRI	CASTG	2 cut(s)	82, 1300
VpaK11BI	GGWCC	1 cut(s)	406
XagI	CCTNNNNNAGG	2 cut(s)	500, 654
XapI	RAATTY	1 cut(s)	1465
XmiI	GTMKAC	2 cut(s)	1411, 1459
XspI	CTAG	4 cut(s)	453, 732, 846, 1122
ZrmI	AGTACT	1 cut(s)	457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.