MD05G1227200.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
36095424 .. 36106867
11444 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1227200.v1.1.491

Sequence Viewer

Length: 1992 bp
ATGGCTATCATCAACTTAGTTTTCCTGATCATTTTTGCATGCCTGTGGAGTTCCCATGATGGAAGAGACACGCTGAAACAAGGTGATACTCTCAATTCCTCAAGTTCCTTGCTTTCTAGCTATCATCACGGAGATTCTGCAACTGCAAATGGAGCATGGATTGGCAACCGAGACTCGCCTGTTTTATACCCTTCATCCCCACTACTTACATTGGACTTCAACAATACATTGAAGATTTCCCAAACAGATGAAGATCAAGATCCTATTGTGGTTTGTTCGGCTCCACATACTAGTAATAGTAATACTAGTGTTGTGGCTACCCTTTTGGATTCTGGCAATCTTGTCGTACTACAACAGGTGAATTCTGTGGACGGATCGATGAACCGGGTATTTCTGCGGCAAAGTTTTGATTATCCCATTGATACCTTTCTTCCTGGTATGAAATTAGGTGTGAACCATAGGAACGGCCACATTTGGTCTCTTTCATCATGGTTGGGTATCTTCATCCCAGCTCCTGGGCCTTTCACCCTTGATTGGGACCCCAACCAAGGGCATCTGAAACTGAGGCGAAAAGGGGTTATTTTTTGGACTAGCGGAGTCTTAAAATCAGATGGGAGATTTGAATATATATTATCCGATGATTCCATGATGAAATATAGATTTAGCTTTGTTTCAAATGAAAATGAAGACTACGTTACTTACACTGCTGCAGAAGGTGGCTCTCCACAAGAGTTGGTGTTGTACCCCTTTGGGTCACTGTATGAGTATCGTGTACAACTTGATGTTGCACAAGCAGAAAAATGTGATGGCTATAACACTGAGGGAGGGTGCGTGAAAAAGGACCGCCCGAGTGAATGTATGAAAGAATTTGGTGGTGAATTTGAGCTCAAAAATGGTTCTTTTGAACCAAGCAATATCACTAATACATCACGAGACCCCTACTGGTTTGACTGTCAGTTCGTTGAAAACATCACCGGCTCGGGTACTACAAATGGTAGTTTTGTTTTGCCAAGAAAATCAAGCACGCCAATAAAACCTTCATCACAAAATTTTATCCCACGTAAGCTATGGATTGTCATTGCTATTCCCACTGCTCTACTTGTAGCGTTGAGTTGCATCTTGTATCAACTAAAAAGAAGAAAATTTTCACTTTCAGATGATAACGGGAGAAAGATTCAGAATGAATCAGAATCGCTTTACTTCATGAGATCTAACAGACGTGGTGATCATGGTGGTGGGTTTCGAAATTATGGAAAGATGGGGAATTCTGAATTAAGTGTATTTTGCTACGCATCTGTCTTGGCTGCCACTTGCAACTTCTCTGAAGAAAACAAGCTCGGGCAAGGGGGCTTTGCGCCTGTTTATAAGGGAAAATTGGTGACGGGAAGAGAGATGGCAGTAAAGAGGCTTTCAAAATGTTCAGGACAAGGAACATTGGAGTTTAAAAATGAATTAATGCTCATATCTGAACTCCAACATACGAACCTTGTTCAGCTCTTGGGATTTTGCATTCATGGTGAAGAGAGGATGCTGATATATGAGTACATGCCAAACAAAAGTTTGGACAACTTTTTATTTGATTCTACCAGAGCTCTACTAGATTGGAAGAAGCGTTTCAGTATAATTGAAGGAATTGCTCAAGGATTGCTTTACTTGCACGAATACTCGAGATTGAGAGTAATTCATAGAGATTTGAAAACTAGTAACATACTGCTCGATGAAAATATTAACCCCAAAATATCAGATTTTGGTATAGCCAGGATATTCACCGATAATGAATTGGAAGCAAATACTGGTAGGATTGTTGGGACGCGGAAAAACAACAGCTTCTATAGTGATGAGCGTGTGCTAAATTTAGTAGAATATGGCTGGTTGTCTGTGTTGATAAGAACTTCAGTGCGGACTTTGCTGACATATGGCTGGTTGAGTAGCATGTATCCAGTACCAGCTTTCAAAGCCATTAACCATGGGTGTGCATGCTGGAGCATTTAA

Protein Analysis

664

Amino Acids

74.52

Weight (kDa)

6.69

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 53 - 164 3.1e-21 D-mannose binding lectin
Pkinase PF00069 441 - 604 9.5e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 443 - 594 1.2e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1365
AccB7I CCANNNNNTGG 1 cut(s) 515
AccII CGCG 1 cut(s) 1813
AciI CCGC 5 cut(s) 397, 594, 844, 1813, 1900
AclWI GGATC 2 cut(s) 254, 382
AcoI YGGCCR 1 cut(s) 466
AcsI RAATTY 7 cut(s) 361, 866, 878, 1048, 1142, 1264, 1852
AcuI CTGAAG 2 cut(s) 1344, 1878
AfaI GTAC 6 cut(s) 348, 743, 774, 985, 1544, 1944
AfiI CCNNNNNNNGG 5 cut(s) 515, 534, 535, 548, 549
AhlI ACTAGT 3 cut(s) 290, 305, 1700
AjiI CACGTC 1 cut(s) 1220
AjnI CCWGG 3 cut(s) 433, 514, 1757
AjuI GAANNNNNNNTTGG 2 cut(s) 1021, 1053
Alw21I GWGCWC 2 cut(s) 888, 1594
Alw26I GTCTC 4 cut(s) 60, 165, 483, 927
AlwI GGATC 2 cut(s) 254, 382
AlwNI CAGNNNCTG 1 cut(s) 515
Ama87I CYCGRG 4 cut(s) 847, 979, 1337, 1666
AoxI GGCC 2 cut(s) 466, 518
ApeKI GCWGC 2 cut(s) 707, 1304
ApoI RAATTY 7 cut(s) 361, 866, 878, 1048, 1142, 1264, 1852
ArsI GACNNNNNNTTYG 2 cut(s) 941, 973
AseI ATTAAT 1 cut(s) 1454
Asp700I GAANNNNTTC 2 cut(s) 1144, 1613
AspLEI GCGC 1 cut(s) 1357
AspS9I GGNCC 3 cut(s) 518, 538, 841
AsuC2I CCSGG 1 cut(s) 386
AsuHPI GGTGA 9 cut(s) 95, 370, 517, 887, 964, 1235, 1390, 1529, 1759
AsuII TTCGAA 1 cut(s) 1243
AvaI CYCGRG 4 cut(s) 847, 979, 1337, 1666
AvaII GGWCC 2 cut(s) 538, 841
BanII GRGCYC 2 cut(s) 888, 1594
BauI CACGAG 1 cut(s) 930
BbsI GAAGAC 1 cut(s) 693
Bbv12I GWGCWC 2 cut(s) 888, 1594
BbvI GCAGC 2 cut(s) 694, 1291
BccI CCATC 5 cut(s) 53, 605, 800, 1252, 1387
BceAI ACGGC 1 cut(s) 481
BcgI CGANNNNNNTGC 2 cut(s) 325, 359
BciT130I CCWGG 3 cut(s) 435, 516, 1759
BciVI GTATCC 1 cut(s) 1947
BclI TGATCA 2 cut(s) 27, 1225
BcnI CCSGG 1 cut(s) 386
BcoDI GTCTC 4 cut(s) 60, 165, 483, 927
BcuI ACTAGT 3 cut(s) 290, 305, 1700
BfaI CTAG 6 cut(s) 117, 291, 306, 591, 1598, 1701
BfmI CTRYAG 2 cut(s) 708, 1831
BfuI GTATCC 1 cut(s) 1947
BglII AGATCT 1 cut(s) 1208
BisI GCNGC 3 cut(s) 398, 708, 1305
BlsI GCNGC 3 cut(s) 399, 709, 1306
Bme1390I CCNGG 4 cut(s) 386, 435, 516, 1759
Bme18I GGWCC 2 cut(s) 538, 841
BmeT110I CYCGRG 4 cut(s) 847, 979, 1337, 1666
BmgBI CACGTC 1 cut(s) 1220
BmgT120I GGNCC 3 cut(s) 518, 538, 841
BmiI GGNNCC 3 cut(s) 282, 539, 540
BmrFI CCNGG 4 cut(s) 386, 435, 516, 1759
BmsI GCATC 4 cut(s) 562, 1125, 1301, 1518
BpiI GAAGAC 1 cut(s) 693
Bpu14I TTCGAA 1 cut(s) 1243
BpuEI CTTGAG 2 cut(s) 85, 1623
BpuMI CCSGG 1 cut(s) 386
Bsa29I ATCGAT 1 cut(s) 377
BsaAI YACGTR 1 cut(s) 1061
BsaBI GATNNNNATC 2 cut(s) 252, 258
BsaI GGTCTC 2 cut(s) 483, 927
BsaJI CCNNGG 3 cut(s) 515, 547, 1966
BsaXI ACNNNNNCTCC 2 cut(s) 816, 846
Bsc4I CCNNNNNNNGG 5 cut(s) 515, 534, 535, 548, 549
Bse118I RCCGGY 1 cut(s) 974
Bse1I ACTGG 3 cut(s) 947, 1798, 1940
Bse3DI GCAATG 1 cut(s) 1077
Bse8I GATNNNNATC 2 cut(s) 252, 258
BseBI CCWGG 3 cut(s) 435, 516, 1759
BseCI ATCGAT 1 cut(s) 377
BseDI CCNNGG 3 cut(s) 515, 547, 1966
BseGI GGATG 3 cut(s) 194, 504, 1533
BseJI GATNNNNATC 2 cut(s) 252, 258
BseLI CCNNNNNNNGG 5 cut(s) 515, 534, 535, 548, 549
BseMI GCAATG 1 cut(s) 1077
BseMII CTCAG 2 cut(s) 554, 810
BseNI ACTGG 3 cut(s) 947, 1798, 1940
BseXI GCAGC 2 cut(s) 694, 1291
BseYI CCCAGC 1 cut(s) 508
Bsh1236I CGCG 1 cut(s) 1813
BshFI GGCC 2 cut(s) 468, 520
BshVI ATCGAT 1 cut(s) 377
BsiHKAI GWGCWC 2 cut(s) 888, 1594
BsiHKCI CYCGRG 4 cut(s) 847, 979, 1337, 1666
BsiSI CCGG 2 cut(s) 385, 975
BslFI GGGAC 2 cut(s) 551, 1822
BslI CCNNNNNNNGG 5 cut(s) 515, 534, 535, 548, 549
BsmAI GTCTC 4 cut(s) 60, 165, 483, 927
BsmFI GGGAC 2 cut(s) 551, 1822
BsmI GAATGC 1 cut(s) 1509
BsnI GGCC 2 cut(s) 468, 520
Bso31I GGTCTC 2 cut(s) 483, 927
BsoBI CYCGRG 4 cut(s) 847, 979, 1337, 1666
Bsp119I TTCGAA 1 cut(s) 1243
Bsp1286I GDGCHC 2 cut(s) 888, 1594
Bsp1407I TGTACA 1 cut(s) 772
Bsp143I GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
Bsp19I CCATGG 1 cut(s) 1966
BspACI CCGC 5 cut(s) 397, 594, 844, 1813, 1900
BspANI GGCC 2 cut(s) 468, 520
BspCNI CTCAG 2 cut(s) 555, 811
BspDI ATCGAT 1 cut(s) 377
BspFNI CGCG 1 cut(s) 1813
BspHI TCATGA 1 cut(s) 1203
BspLI GGNNCC 3 cut(s) 282, 539, 540
BspMAI CTGCAG 1 cut(s) 712
BspPI GGATC 2 cut(s) 254, 382
BspT104I TTCGAA 1 cut(s) 1243
BspTNI GGTCTC 2 cut(s) 483, 927
BsrDI GCAATG 1 cut(s) 1077
BsrFI RCCGGY 1 cut(s) 974
BsrGI TGTACA 1 cut(s) 772
BsrI ACTGG 3 cut(s) 947, 1798, 1940
BssAI RCCGGY 1 cut(s) 974
BssECI CCNNGG 3 cut(s) 515, 547, 1966
BssMI GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
BssSI CACGAG 1 cut(s) 930
BssT1I CCWWGG 2 cut(s) 547, 1966
Bst2BI CACGAG 1 cut(s) 930
Bst2UI CCWGG 3 cut(s) 435, 516, 1759
Bst4CI ACNGT 2 cut(s) 759, 953
Bst6I CTCTTC 3 cut(s) 58, 1381, 1515
BstAUI TGTACA 1 cut(s) 772
BstBAI YACGTR 1 cut(s) 1061
BstBI TTCGAA 1 cut(s) 1243
BstC8I GCNNGC 3 cut(s) 40, 1025, 1978
BstDEI CTNAG 3 cut(s) 16, 563, 819
BstDSI CCRYGG 1 cut(s) 1966
BstF5I GGATG 3 cut(s) 194, 504, 1533
BstFNI CGCG 1 cut(s) 1813
BstHHI GCGC 1 cut(s) 1357
BstKTI GATC 6 cut(s) 30, 256, 262, 377, 1211, 1228
BstMAI GTCTC 4 cut(s) 60, 165, 483, 927
BstMBI GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
BstMWI GCNNNNNNNGC 4 cut(s) 152, 1654, 1906, 1955
BstNI CCWGG 3 cut(s) 435, 516, 1759
BstNSI RCATGY 4 cut(s) 42, 1549, 1936, 1980
BstSCI CCNGG 4 cut(s) 384, 433, 514, 1757
BstSFI CTRYAG 2 cut(s) 708, 1831
BstUI CGCG 1 cut(s) 1813
BstV1I GCAGC 2 cut(s) 694, 1291
BstV2I GAAGAC 1 cut(s) 693
BstX2I RGATCY 2 cut(s) 259, 1208
BstYI RGATCY 2 cut(s) 259, 1208
Bsu15I ATCGAT 1 cut(s) 377
BsuI GTATCC 1 cut(s) 1947
BsuRI GGCC 2 cut(s) 468, 520
BsuTUI ATCGAT 1 cut(s) 377
BtgI CCRYGG 1 cut(s) 1966
BtrI CACGTC 1 cut(s) 1220
BtsCI GGATG 3 cut(s) 194, 504, 1533
BtsI GCAGTG 2 cut(s) 702, 1089
BtsIMutI CAGTG 5 cut(s) 702, 755, 816, 1089, 1902
Cac8I GCNNGC 3 cut(s) 40, 1025, 1978
CaiI CAGNNNCTG 1 cut(s) 515
CciI TCATGA 1 cut(s) 1203
CfoI GCGC 1 cut(s) 1357
Cfr10I RCCGGY 1 cut(s) 974
Cfr13I GGNCC 3 cut(s) 518, 538, 841
ClaI ATCGAT 1 cut(s) 377
CseI GACGC 1 cut(s) 1819
Csp6I GTAC 6 cut(s) 347, 742, 773, 984, 1543, 1943
CspCI CAANNNNNGTGG 2 cut(s) 714, 749
CviQI GTAC 6 cut(s) 347, 742, 773, 984, 1543, 1943
DdeI CTNAG 3 cut(s) 16, 563, 819
DpnI GATC 6 cut(s) 29, 255, 261, 376, 1210, 1227
DpnII GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
DraI TTTAAA 1 cut(s) 1444
EaeI YGGCCR 1 cut(s) 466
Eam1104I CTCTTC 3 cut(s) 58, 1381, 1515
EarI CTCTTC 3 cut(s) 58, 1381, 1515
Ecl136II GAGCTC 2 cut(s) 886, 1592
Eco130I CCWWGG 2 cut(s) 547, 1966
Eco24I GRGCYC 2 cut(s) 888, 1594
Eco31I GGTCTC 2 cut(s) 483, 927
Eco47I GGWCC 2 cut(s) 538, 841
Eco53kI GAGCTC 2 cut(s) 886, 1592
Eco57I CTGAAG 2 cut(s) 1344, 1878
Eco88I CYCGRG 4 cut(s) 847, 979, 1337, 1666
EcoICRI GAGCTC 2 cut(s) 886, 1592
EcoO109I RGGNCCY 1 cut(s) 538
EcoRI GAATTC 2 cut(s) 361, 1264
EcoRII CCWGG 3 cut(s) 433, 514, 1757
EcoT14I CCWWGG 2 cut(s) 547, 1966
EcoT38I GRGCYC 2 cut(s) 888, 1594
ErhI CCWWGG 2 cut(s) 547, 1966
FalI AAGNNNNNCTT 2 cut(s) 1632, 1664
FaqI GGGAC 2 cut(s) 551, 1822
FauNDI CATATG 1 cut(s) 1915
FbaI TGATCA 2 cut(s) 27, 1225
Fnu4HI GCNGC 3 cut(s) 398, 708, 1305
FokI GGATG 3 cut(s) 181, 491, 1540
FriOI GRGCYC 2 cut(s) 888, 1594
Fsp4HI GCNGC 3 cut(s) 398, 708, 1305
FspBI CTAG 6 cut(s) 117, 291, 306, 591, 1598, 1701
GlaI GCGC 1 cut(s) 1356
GluI GCNGC 3 cut(s) 398, 708, 1305
GsaI CCCAGC 1 cut(s) 512
HaeIII GGCC 2 cut(s) 468, 520
HapII CCGG 2 cut(s) 385, 975
HgaI GACGC 1 cut(s) 1819
HhaI GCGC 1 cut(s) 1357
Hin6I GCGC 1 cut(s) 1355
HinP1I GCGC 1 cut(s) 1355
HinfI GANTC 9 cut(s) 134, 173, 329, 597, 641, 1174, 1184, 1190, 1580
HpaII CCGG 2 cut(s) 385, 975
HphI GGTGA 9 cut(s) 95, 370, 517, 887, 964, 1235, 1390, 1529, 1759
Hpy166II GTNNAC 3 cut(s) 370, 454, 773
Hpy188III TCNNGA 6 cut(s) 25, 257, 930, 1204, 1422, 1668
Hpy8I GTNNAC 3 cut(s) 370, 454, 773
HpyAV CCTTC 4 cut(s) 201, 707, 1047, 1622
HpyCH4III ACNGT 2 cut(s) 759, 953
HpyCH4IV ACGT 3 cut(s) 693, 1060, 1219
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 1654, 1906, 1955
HpyF3I CTNAG 3 cut(s) 16, 563, 819
HpySE526I ACGT 3 cut(s) 693, 1060, 1219
HspAI GCGC 1 cut(s) 1355
KflI GGGWCCC 1 cut(s) 538
Ksp22I TGATCA 2 cut(s) 27, 1225
Kzo9I GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
LmnI GCTCC 4 cut(s) 152, 286, 517, 1983
Lsp1109I GCAGC 2 cut(s) 694, 1291
LweI GCATC 4 cut(s) 562, 1125, 1301, 1518
MaeI CTAG 6 cut(s) 117, 291, 306, 591, 1598, 1701
MaeII ACGT 3 cut(s) 693, 1060, 1219
MaeIII GTNAC 4 cut(s) 694, 753, 1378, 1703
MalI GATC 6 cut(s) 29, 255, 261, 376, 1210, 1227
MboI GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
MflI RGATCY 2 cut(s) 259, 1208
MhlI GDGCHC 2 cut(s) 888, 1594
MlyI GAGTC 2 cut(s) 167, 606
MmeI TCCRAC 1 cut(s) 1498
MnlI CCTC 6 cut(s) 109, 558, 814, 818, 1398, 1518
MroXI GAANNNNTTC 2 cut(s) 1144, 1613
MseI TTAA 7 cut(s) 602, 1274, 1443, 1454, 1728, 1962, 1990
MslI CAYNNNNRTG 3 cut(s) 43, 1233, 1971
MspI CCGG 2 cut(s) 385, 975
MspR9I CCNGG 4 cut(s) 386, 435, 516, 1759
Mva1269I GAATGC 1 cut(s) 1509
MvaI CCWGG 3 cut(s) 435, 516, 1759
MvnI CGCG 1 cut(s) 1813
MwoI GCNNNNNNNGC 4 cut(s) 152, 1654, 1906, 1955
NciI CCSGG 1 cut(s) 386
NcoI CCATGG 1 cut(s) 1966
NdeI CATATG 1 cut(s) 1915
NdeII GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
NlaIV GGNNCC 3 cut(s) 282, 539, 540
NmuCI GTSAC 2 cut(s) 753, 1378
NspI RCATGY 4 cut(s) 42, 1549, 1936, 1980
NspV TTCGAA 1 cut(s) 1243
PaeI GCATGC 2 cut(s) 42, 1980
PaeR7I CTCGAG 1 cut(s) 1666
PagI TCATGA 1 cut(s) 1203
PctI GAATGC 1 cut(s) 1509
PdmI GAANNNNTTC 2 cut(s) 1144, 1613
PfeI GAWTC 7 cut(s) 134, 329, 641, 1174, 1184, 1190, 1580
PflMI CCANNNNNTGG 1 cut(s) 515
PkrI GCNGC 3 cut(s) 399, 709, 1306
PleI GAGTC 2 cut(s) 167, 605
PpsI GAGTC 2 cut(s) 167, 605
Ppu21I YACGTR 1 cut(s) 1061
PpuMI RGGWCCY 1 cut(s) 538
PshBI ATTAAT 1 cut(s) 1454
PsiI TTATAA 1 cut(s) 1365
Psp124BI GAGCTC 2 cut(s) 888, 1594
Psp5II RGGWCCY 1 cut(s) 538
Psp6I CCWGG 3 cut(s) 433, 514, 1757
PspFI CCCAGC 1 cut(s) 508
PspGI CCWGG 3 cut(s) 433, 514, 1757
PspN4I GGNNCC 3 cut(s) 282, 539, 540
PspPI GGNCC 3 cut(s) 518, 538, 841
PspPPI RGGWCCY 1 cut(s) 538
PstI CTGCAG 1 cut(s) 712
PstNI CAGNNNCTG 1 cut(s) 515
PsuI RGATCY 2 cut(s) 259, 1208
RsaI GTAC 6 cut(s) 348, 743, 774, 985, 1544, 1944
RsaNI GTAC 6 cut(s) 347, 742, 773, 984, 1543, 1943
RseI CAYNNNNRTG 3 cut(s) 43, 1233, 1971
SacI GAGCTC 2 cut(s) 888, 1594
SaqAI TTAA 7 cut(s) 602, 1274, 1443, 1454, 1728, 1962, 1990
SatI GCNGC 3 cut(s) 398, 708, 1305
Sau3AI GATC 6 cut(s) 27, 253, 259, 374, 1208, 1225
Sau96I GGNCC 3 cut(s) 518, 538, 841
SchI GAGTC 2 cut(s) 167, 606
ScrFI CCNGG 4 cut(s) 386, 435, 516, 1759
SduI GDGCHC 2 cut(s) 888, 1594
SfaNI GCATC 4 cut(s) 562, 1125, 1301, 1518
SfcI CTRYAG 2 cut(s) 708, 1831
Sfr274I CTCGAG 1 cut(s) 1666
SfuI TTCGAA 1 cut(s) 1243
SinI GGWCC 2 cut(s) 538, 841
SlaI CTCGAG 1 cut(s) 1666
SmiMI CAYNNNNRTG 3 cut(s) 43, 1233, 1971
SmlI CTYRAG 3 cut(s) 100, 1638, 1666
SmoI CTYRAG 3 cut(s) 100, 1638, 1666
SpeI ACTAGT 3 cut(s) 290, 305, 1700
SphI GCATGC 2 cut(s) 42, 1980
SsiI CCGC 5 cut(s) 397, 594, 844, 1813, 1900
SspI AATATT 1 cut(s) 1726
SspMI CTAG 6 cut(s) 117, 291, 306, 591, 1598, 1701
SstI GAGCTC 2 cut(s) 888, 1594
StyD4I CCNGG 4 cut(s) 384, 433, 514, 1757
StyI CCWWGG 2 cut(s) 547, 1966
TaaI ACNGT 2 cut(s) 759, 953
TaiI ACGT 3 cut(s) 696, 1063, 1222
TaqI TCGA 4 cut(s) 377, 1243, 1667, 1716
TatI WGTACW 2 cut(s) 772, 1542
TauI GCSGC 1 cut(s) 400
TfiI GAWTC 7 cut(s) 134, 329, 641, 1174, 1184, 1190, 1580
Tru1I TTAA 7 cut(s) 602, 1274, 1443, 1454, 1728, 1962, 1990
Tru9I TTAA 7 cut(s) 602, 1274, 1443, 1454, 1728, 1962, 1990
TscAI CASTG 5 cut(s) 709, 762, 823, 1096, 1902
TseFI GTSAC 2 cut(s) 753, 1378
TseI GCWGC 2 cut(s) 707, 1304
Tsp45I GTSAC 2 cut(s) 753, 1378
TspGWI ACGGA 2 cut(s) 144, 387
TspRI CASTG 5 cut(s) 709, 762, 823, 1096, 1902
Van91I CCANNNNNTGG 1 cut(s) 515
VpaK11BI GGWCC 2 cut(s) 538, 841
VspI ATTAAT 1 cut(s) 1454
XapI RAATTY 7 cut(s) 361, 866, 878, 1048, 1142, 1264, 1852
XceI RCATGY 4 cut(s) 42, 1549, 1936, 1980
XcmI CCANNNNNNNNNTGG 1 cut(s) 1065
XhoI CTCGAG 1 cut(s) 1666
XmnI GAANNNNTTC 2 cut(s) 1144, 1613
XspI CTAG 6 cut(s) 117, 291, 306, 591, 1598, 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.