RLG00000032818

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19368084 .. 19369460
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032818

Sequence Viewer

Length: 333 bp
ATGGCTTTTACATTGGGACTGGTGTTTATGACTGATGAGCCCGATCCAAAAGATTTCAGCCAAAAAGATGGTGATCCAGTGGTGCTTTACTCAGCTTCAGAGACCGCCAATAGCAGTGTATTAGCTACTCTTTTGGATTCTGGCAACTTTGTCCTAGAAGAGGTGAGCTCTGATGGATCAGTGAAAATGGTTTTGCGGCAAAGTTTTGATTATCCAGGAGATGTGCTTCTGCCAGTAATGGCCACAACTGGTCACTTTCATCGTGGTTTACTGAGAAAAGTGCAATGCCAGGATCTTTCACACTTGATTGGGACCCTGAGGGACATGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.04

Weight (kDa)

4.6

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 29 - 90 7e-11 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 105, 196
AclWI GGATC 4 cut(s) 38, 68, 184, 300
AcoI YGGCCR 1 cut(s) 240
AcuI CTGAAG 1 cut(s) 81
AfiI CCNNNNNNNGG 1 cut(s) 160
AjnI CCWGG 2 cut(s) 214, 288
AluBI AGCT 3 cut(s) 95, 125, 168
AluI AGCT 3 cut(s) 95, 125, 168
Alw21I GWGCWC 1 cut(s) 170
Alw26I GTCTC 1 cut(s) 95
AlwI GGATC 4 cut(s) 38, 68, 184, 300
AoxI GGCC 1 cut(s) 240
AspS9I GGNCC 1 cut(s) 312
AsuHPI GGTGA 2 cut(s) 83, 175
AvaII GGWCC 1 cut(s) 312
AxyI CCTNAGG 1 cut(s) 317
BalI TGGCCA 1 cut(s) 242
BanII GRGCYC 2 cut(s) 42, 170
Bbv12I GWGCWC 1 cut(s) 170
BccI CCATC 2 cut(s) 62, 167
BciT130I CCWGG 2 cut(s) 216, 290
BcoDI GTCTC 1 cut(s) 95
BfaI CTAG 1 cut(s) 155
BisI GCNGC 1 cut(s) 197
BlsI GCNGC 1 cut(s) 198
Bme1390I CCNGG 2 cut(s) 216, 290
Bme18I GGWCC 1 cut(s) 312
BmgT120I GGNCC 1 cut(s) 312
BmiI GGNNCC 2 cut(s) 313, 314
BmrFI CCNGG 2 cut(s) 216, 290
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BsaBI GATNNNNATC 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 95
Bsc4I CCNNNNNNNGG 1 cut(s) 160
Bse1I ACTGG 4 cut(s) 24, 77, 233, 253
Bse21I CCTNAGG 1 cut(s) 317
Bse3DI GCAATG 1 cut(s) 290
Bse8I GATNNNNATC 1 cut(s) 72
BseBI CCWGG 2 cut(s) 216, 290
BseJI GATNNNNATC 1 cut(s) 72
BseLI CCNNNNNNNGG 1 cut(s) 160
BseMI GCAATG 1 cut(s) 290
BseMII CTCAG 3 cut(s) 105, 263, 308
BseNI ACTGG 4 cut(s) 24, 77, 233, 253
BshFI GGCC 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 170
BslFI GGGAC 2 cut(s) 30, 325
BslI CCNNNNNNNGG 1 cut(s) 160
BsmAI GTCTC 1 cut(s) 95
BsmFI GGGAC 2 cut(s) 30, 325
BsnI GGCC 1 cut(s) 242
Bso31I GGTCTC 1 cut(s) 95
Bsp1286I GDGCHC 2 cut(s) 42, 170
Bsp143I GATC 4 cut(s) 43, 73, 176, 292
BspACI CCGC 2 cut(s) 105, 196
BspANI GGCC 1 cut(s) 242
BspCNI CTCAG 3 cut(s) 104, 264, 309
BspLI GGNNCC 2 cut(s) 313, 314
BspPI GGATC 4 cut(s) 38, 68, 184, 300
BspTNI GGTCTC 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 290
BsrI ACTGG 4 cut(s) 24, 77, 233, 253
BssMI GATC 4 cut(s) 43, 73, 176, 292
Bst2UI CCWGG 2 cut(s) 216, 290
Bst6I CTCTTC 1 cut(s) 153
BstDEI CTNAG 3 cut(s) 91, 272, 317
BstENI CCTNNNNNAGG 1 cut(s) 158
BstKTI GATC 4 cut(s) 46, 76, 179, 295
BstMAI GTCTC 1 cut(s) 95
BstMBI GATC 4 cut(s) 43, 73, 176, 292
BstNI CCWGG 2 cut(s) 216, 290
BstSCI CCNGG 2 cut(s) 214, 288
BstX2I RGATCY 1 cut(s) 292
BstXI CCANNNNNNTGG 1 cut(s) 68
BstYI RGATCY 1 cut(s) 292
Bsu36I CCTNAGG 1 cut(s) 317
BsuRI GGCC 1 cut(s) 242
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 3 cut(s) 84, 121, 186
Cfr13I GGNCC 1 cut(s) 312
CviAII CATG 1 cut(s) 325
CviJI RGCY 7 cut(s) 5, 40, 60, 95, 125, 168, 242
CviKI_1 RGCY 7 cut(s) 5, 40, 60, 95, 125, 168, 242
DdeI CTNAG 3 cut(s) 91, 272, 317
DpnI GATC 4 cut(s) 45, 75, 178, 294
DpnII GATC 4 cut(s) 43, 73, 176, 292
EaeI YGGCCR 1 cut(s) 240
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
Ecl136II GAGCTC 1 cut(s) 168
Eco24I GRGCYC 2 cut(s) 42, 170
Eco31I GGTCTC 1 cut(s) 95
Eco47I GGWCC 1 cut(s) 312
Eco53kI GAGCTC 1 cut(s) 168
Eco57I CTGAAG 1 cut(s) 81
Eco81I CCTNAGG 1 cut(s) 317
EcoICRI GAGCTC 1 cut(s) 168
EcoNI CCTNNNNNAGG 1 cut(s) 158
EcoO109I RGGNCCY 1 cut(s) 312
EcoRII CCWGG 2 cut(s) 214, 288
EcoT38I GRGCYC 2 cut(s) 42, 170
FaeI CATG 1 cut(s) 328
FaiI YATR 2 cut(s) 29, 326
FaqI GGGAC 2 cut(s) 30, 325
FatI CATG 1 cut(s) 324
Fnu4HI GCNGC 1 cut(s) 197
FriOI GRGCYC 2 cut(s) 42, 170
Fsp4HI GCNGC 1 cut(s) 197
FspBI CTAG 1 cut(s) 155
GluI GCNGC 1 cut(s) 197
HaeIII GGCC 1 cut(s) 242
Hin1II CATG 1 cut(s) 328
HinfI GANTC 1 cut(s) 137
HphI GGTGA 2 cut(s) 83, 175
Hpy166II GTNNAC 1 cut(s) 269
Hpy188I TCNGA 2 cut(s) 100, 172
Hpy8I GTNNAC 1 cut(s) 269
HpyCH4V TGCA 1 cut(s) 283
HpyF3I CTNAG 3 cut(s) 91, 272, 317
Hsp92II CATG 1 cut(s) 328
KflI GGGWCCC 1 cut(s) 312
Kzo9I GATC 4 cut(s) 43, 73, 176, 292
MaeI CTAG 1 cut(s) 155
MaeIII GTNAC 1 cut(s) 251
MalI GATC 4 cut(s) 45, 75, 178, 294
MboI GATC 4 cut(s) 43, 73, 176, 292
MboII GAAGA 1 cut(s) 170
MflI RGATCY 1 cut(s) 292
MhlI GDGCHC 2 cut(s) 42, 170
MlsI TGGCCA 1 cut(s) 242
MluCI AATT 1 cut(s) 328
MluNI TGGCCA 1 cut(s) 242
MnlI CCTC 2 cut(s) 154, 312
Mox20I TGGCCA 1 cut(s) 242
MscI TGGCCA 1 cut(s) 242
Msp20I TGGCCA 1 cut(s) 242
MspR9I CCNGG 2 cut(s) 216, 290
MvaI CCWGG 2 cut(s) 216, 290
NdeII GATC 4 cut(s) 43, 73, 176, 292
NlaIII CATG 1 cut(s) 328
NlaIV GGNNCC 2 cut(s) 313, 314
NmuCI GTSAC 1 cut(s) 251
PfeI GAWTC 1 cut(s) 137
PfoI TCCNGGA 1 cut(s) 214
PkrI GCNGC 1 cut(s) 198
PpuMI RGGWCCY 1 cut(s) 312
Psp124BI GAGCTC 1 cut(s) 170
Psp5II RGGWCCY 1 cut(s) 312
Psp6I CCWGG 2 cut(s) 214, 288
PspGI CCWGG 2 cut(s) 214, 288
PspN4I GGNNCC 2 cut(s) 313, 314
PspPI GGNCC 1 cut(s) 312
PspPPI RGGWCCY 1 cut(s) 312
PsuI RGATCY 1 cut(s) 292
SacI GAGCTC 1 cut(s) 170
SatI GCNGC 1 cut(s) 197
Sau3AI GATC 4 cut(s) 43, 73, 176, 292
Sau96I GGNCC 1 cut(s) 312
ScrFI CCNGG 2 cut(s) 216, 290
SduI GDGCHC 2 cut(s) 42, 170
SetI ASST 4 cut(s) 97, 127, 165, 170
SinI GGWCC 1 cut(s) 312
Sse9I AATT 1 cut(s) 328
SsiI CCGC 2 cut(s) 105, 196
SspMI CTAG 1 cut(s) 155
SstI GAGCTC 1 cut(s) 170
StyD4I CCNGG 2 cut(s) 214, 288
TasI AATT 1 cut(s) 328
TauI GCSGC 1 cut(s) 199
TfiI GAWTC 1 cut(s) 137
TscAI CASTG 3 cut(s) 84, 121, 186
TseFI GTSAC 1 cut(s) 251
Tsp45I GTSAC 1 cut(s) 251
TspDTI ATGAA 1 cut(s) 248
TspRI CASTG 3 cut(s) 84, 121, 186
VpaK11BI GGWCC 1 cut(s) 312
XagI CCTNNNNNAGG 1 cut(s) 158
XspI CTAG 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.