Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006827.1

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Reverse (-)

35172 .. 37990

Gene Structure 2819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006827.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

atggttaatgtgatgatcatgcttgctggttttcaagaacatcaggagaaagaaaagtatcttctgatcatcaaccatggttttaggtttgatcaactcttaattttcttcctgatcattctttcaagctcgtggaattgtcatgttgctgctgcagcagacaatattggggacacactcaaaataggcgacactctcaattcctcaagcgctttagtttccaccactgggaagttcactttgctttttttgcccctcagttcaagttccaactacagctatctatatattaggcggtacaatgtaagtggtgcgaatagggcttgggttggcaaccgagactcgcctgttctatacccttttggagttcttaccttggactccaacaacacattaaaaatcattacaaacaatgaaagtggtggcggcgatcctcctatggtgcttggctccgtgccaaaaagtagtagtaatgttgtggctactctgttggattctggcaattttatcctaaaagagttgaactccagacaagtggccggccaactacttgtatggcagatttcggcagtccatttgtgccaaaaaaaggttattttcaaccaatcacctcgagttcaacttcaagatgcccatactcgctcaactttgtatcaaatggaagtcacagtggtactagtattgactgtaacaatacttgtttgcaaaactgtgactgccttggattcgactttctatttgataatcagacaggatgccgattttggagtgtggactgtgaattcgttgaagaccgcactcaacctggcatgggagctgtggaaagaaggcgcagggctacaactaatggatccaacactagctgattcatctactaacgaagatcaactgttaagatgcgttcaagttggccttctatgcgtggaggatagtgcagcgaatcgacctaccatgtcagatgtgctctccgcgttgacaaatgaaagctcacgattacctgcacctacaaagccagcattttctacagataggcatgcggtcaccagtagtatagttgaaaaggagccacaaattttttctgtaaatgatctgaccatttctgattgtgatggacgttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

372

Amino Acids

40.87

Weight (kDa)

5.54

Isoelectric Point (pI)

37.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1006
AccII	CGCG	1 cut(s)	971
AciI	CCGC	5 cut(s)	295, 426, 795, 969, 1037
AclWI	GGATC	3 cut(s)	425, 845, 858
AcoI	YGGCCR	2 cut(s)	537, 541
AcsI	RAATTY	2 cut(s)	781, 1071
AfaI	GTAC	2 cut(s)	299, 675
AfeI	AGCGCT	1 cut(s)	211
AfiI	CCNNNNNNNGG	3 cut(s)	228, 589, 811
AhlI	ACTAGT	1 cut(s)	676
AjnI	CCWGG	1 cut(s)	804
AluBI	AGCT	5 cut(s)	129, 279, 817, 863, 987
AluI	AGCT	5 cut(s)	129, 279, 817, 863, 987
Alw21I	GWGCWC	1 cut(s)	966
Alw26I	GTCTC	1 cut(s)	333
AlwI	GGATC	3 cut(s)	425, 845, 858
Ama87I	CYCGRG	1 cut(s)	612
Aor51HI	AGCGCT	1 cut(s)	211
AoxI	GGCC	3 cut(s)	537, 541, 910
ApeKI	GCWGC	4 cut(s)	149, 152, 155, 935
ApoI	RAATTY	2 cut(s)	781, 1071
ArsI	GACNNNNNNTTYG	4 cut(s)	721, 753, 766, 798
AspLEI	GCGC	2 cut(s)	212, 833
AsuHPI	GGTGA	2 cut(s)	600, 1033
AvaI	CYCGRG	1 cut(s)	612
BamHI	GGATCC	1 cut(s)	850
BauI	CACGAG	1 cut(s)	130
BbsI	GAAGAC	1 cut(s)	797
Bbv12I	GWGCWC	1 cut(s)	966
BbvI	GCAGC	4 cut(s)	136, 139, 167, 947
BccI	CCATC	1 cut(s)	1103
BciT130I	CCWGG	1 cut(s)	806
BclI	TGATCA	4 cut(s)	15, 66, 91, 114
BcoDI	GTCTC	1 cut(s)	333
BcuI	ACTAGT	1 cut(s)	676
BfaI	CTAG	2 cut(s)	677, 860
BfmI	CTRYAG	3 cut(s)	153, 274, 1023
BfoI	RGCGCY	1 cut(s)	213
BfuAI	ACCTGC	1 cut(s)	1006
BisI	GCNGC	5 cut(s)	150, 153, 156, 427, 936
BlsI	GCNGC	5 cut(s)	151, 154, 157, 428, 937
Bme1390I	CCNGG	1 cut(s)	806
BmeT110I	CYCGRG	1 cut(s)	612
BmiI	GGNNCC	3 cut(s)	451, 852, 1065
BmrFI	CCNGG	1 cut(s)	806
BmrI	ACTGGG	1 cut(s)	237
BmsI	GCATC	3 cut(s)	619, 745, 887
BmuI	ACTGGG	1 cut(s)	237
BpiI	GAAGAC	1 cut(s)	797
BplI	GAGNNNNNCTC	2 cut(s)	509, 541
BpmI	CTGGAG	1 cut(s)	511
BpuEI	CTTGAG	1 cut(s)	190
BsaJI	CCNNGG	3 cut(s)	76, 375, 720
Bsc4I	CCNNNNNNNGG	3 cut(s)	228, 589, 811
Bse118I	RCCGGY	1 cut(s)	539
Bse1I	ACTGG	2 cut(s)	232, 1044
BseBI	CCWGG	1 cut(s)	806
BseDI	CCNNGG	3 cut(s)	76, 375, 720
BseGI	GGATG	1 cut(s)	760
BseLI	CCNNNNNNNGG	3 cut(s)	228, 589, 811
BseMII	CTCAG	1 cut(s)	271
BseNI	ACTGG	2 cut(s)	232, 1044
BseXI	GCAGC	4 cut(s)	136, 139, 167, 947
BsgI	GTGCAG	2 cut(s)	954, 984
Bsh1236I	CGCG	1 cut(s)	971
BshFI	GGCC	3 cut(s)	539, 543, 912
BsiHKAI	GWGCWC	1 cut(s)	966
BsiHKCI	CYCGRG	1 cut(s)	612
BsiSI	CCGG	1 cut(s)	540
BslFI	GGGAC	1 cut(s)	185
BslI	CCNNNNNNNGG	3 cut(s)	228, 589, 811
BsmAI	GTCTC	1 cut(s)	333
BsmFI	GGGAC	1 cut(s)	185
BsnI	GGCC	3 cut(s)	539, 543, 912
BsoBI	CYCGRG	1 cut(s)	612
Bsp1286I	GDGCHC	1 cut(s)	966
Bsp143I	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
Bsp19I	CCATGG	1 cut(s)	76
BspACI	CCGC	5 cut(s)	295, 426, 795, 969, 1037
BspANI	GGCC	3 cut(s)	539, 543, 912
BspCNI	CTCAG	1 cut(s)	270
BspFNI	CGCG	1 cut(s)	971
BspLI	GGNNCC	3 cut(s)	451, 852, 1065
BspMAI	CTGCAG	1 cut(s)	157
BspMI	ACCTGC	1 cut(s)	1006
BspPI	GGATC	3 cut(s)	425, 845, 858
BsrFI	RCCGGY	1 cut(s)	539
BsrI	ACTGG	2 cut(s)	232, 1044
BssAI	RCCGGY	1 cut(s)	539
BssECI	CCNNGG	3 cut(s)	76, 375, 720
BssMI	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
BssSI	CACGAG	1 cut(s)	130
BssT1I	CCWWGG	3 cut(s)	76, 375, 720
Bst2BI	CACGAG	1 cut(s)	130
Bst2UI	CCWGG	1 cut(s)	806
Bst4CI	ACNGT	5 cut(s)	670, 688, 712, 778, 891
BstC8I	GCNNGC	4 cut(s)	24, 541, 1014, 1035
BstDEI	CTNAG	1 cut(s)	257
BstDSI	CCRYGG	1 cut(s)	76
BstEII	GGTNACC	1 cut(s)	1039
BstF5I	GGATG	1 cut(s)	760
BstFNI	CGCG	1 cut(s)	971
BstH2I	RGCGCY	1 cut(s)	213
BstHHI	GCGC	2 cut(s)	212, 833
BstKTI	GATC	8 cut(s)	18, 69, 94, 117, 433, 853, 886, 1090
BstMAI	GTCTC	1 cut(s)	333
BstMBI	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
BstMWI	GCNNNNNNNGC	4 cut(s)	155, 250, 320, 918
BstNI	CCWGG	1 cut(s)	806
BstNSI	RCATGY	1 cut(s)	1037
BstPI	GGTNACC	1 cut(s)	1039
BstSCI	CCNGG	1 cut(s)	804
BstSFI	CTRYAG	3 cut(s)	153, 274, 1023
BstUI	CGCG	1 cut(s)	971
BstV1I	GCAGC	4 cut(s)	136, 139, 167, 947
BstV2I	GAAGAC	1 cut(s)	797
BstX2I	RGATCY	1 cut(s)	850
BstXI	CCANNNNNNTGG	1 cut(s)	535
BstYI	RGATCY	1 cut(s)	850
BsuRI	GGCC	3 cut(s)	539, 543, 912
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	1 cut(s)	760
BtsIMutI	CAGTG	2 cut(s)	225, 675
BveI	ACCTGC	1 cut(s)	1006
Cac8I	GCNNGC	4 cut(s)	24, 541, 1014, 1035
CfoI	GCGC	2 cut(s)	212, 833
Cfr10I	RCCGGY	1 cut(s)	539
Csp6I	GTAC	2 cut(s)	298, 674
CspCI	CAANNNNNGTGG	4 cut(s)	289, 324, 400, 435
CviAII	CATG	6 cut(s)	19, 77, 143, 810, 952, 1034
CviQI	GTAC	2 cut(s)	298, 674
DdeI	CTNAG	1 cut(s)	257
DpnI	GATC	8 cut(s)	17, 68, 93, 116, 432, 852, 885, 1089
DpnII	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
EaeI	YGGCCR	2 cut(s)	537, 541
Eco130I	CCWWGG	3 cut(s)	76, 375, 720
Eco47III	AGCGCT	1 cut(s)	211
Eco88I	CYCGRG	1 cut(s)	612
Eco91I	GGTNACC	1 cut(s)	1039
EcoO65I	GGTNACC	1 cut(s)	1039
EcoRI	GAATTC	1 cut(s)	781
EcoRII	CCWGG	1 cut(s)	804
EcoT14I	CCWWGG	3 cut(s)	76, 375, 720
ErhI	CCWWGG	3 cut(s)	76, 375, 720
FaeI	CATG	6 cut(s)	22, 80, 146, 813, 955, 1037
FalI	AAGNNNNNCTT	2 cut(s)	897, 929
FaqI	GGGAC	1 cut(s)	185
FatI	CATG	6 cut(s)	18, 76, 142, 809, 951, 1033
FbaI	TGATCA	4 cut(s)	15, 66, 91, 114
Fnu4HI	GCNGC	5 cut(s)	150, 153, 156, 427, 936
FokI	GGATG	1 cut(s)	767
FseI	GGCCGGCC	1 cut(s)	543
Fsp4HI	GCNGC	5 cut(s)	150, 153, 156, 427, 936
FspBI	CTAG	2 cut(s)	677, 860
GlaI	GCGC	2 cut(s)	211, 832
GluI	GCNGC	5 cut(s)	150, 153, 156, 427, 936
GsuI	CTGGAG	1 cut(s)	511
HaeII	RGCGCY	1 cut(s)	213
HaeIII	GGCC	3 cut(s)	539, 543, 912
HapII	CCGG	1 cut(s)	540
HhaI	GCGC	2 cut(s)	212, 833
Hin1II	CATG	6 cut(s)	22, 80, 146, 813, 955, 1037
Hin6I	GCGC	2 cut(s)	210, 831
HinP1I	GCGC	2 cut(s)	210, 831
HincII	GTYRAC	1 cut(s)	975
HindII	GTYRAC	1 cut(s)	975
HinfI	GANTC	6 cut(s)	341, 380, 494, 725, 866, 940
HpaII	CCGG	1 cut(s)	540
HphI	GGTGA	2 cut(s)	600, 1033
Hpy166II	GTNNAC	3 cut(s)	237, 774, 975
Hpy188I	TCNGA	5 cut(s)	66, 749, 958, 1092, 1102
Hpy188III	TCNNGA	6 cut(s)	35, 44, 112, 528, 626, 990
Hpy8I	GTNNAC	3 cut(s)	237, 774, 975
HpyAV	CCTTC	2 cut(s)	821, 923
HpyCH4III	ACNGT	5 cut(s)	670, 688, 712, 778, 891
HpyCH4IV	ACGT	1 cut(s)	1114
HpyCH4V	TGCA	4 cut(s)	155, 705, 935, 1001
HpyF10VI	GCNNNNNNNGC	4 cut(s)	155, 250, 320, 918
HpyF3I	CTNAG	1 cut(s)	257
HpySE526I	ACGT	1 cut(s)	1114
Hsp92II	CATG	6 cut(s)	22, 80, 146, 813, 955, 1037
HspAI	GCGC	2 cut(s)	210, 831
KroI	GCCGGC	1 cut(s)	539
KroNI	GCCGGC	1 cut(s)	541
Ksp22I	TGATCA	4 cut(s)	15, 66, 91, 114
Kzo9I	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
LmnI	GCTCC	3 cut(s)	455, 814, 1063
Lsp1109I	GCAGC	4 cut(s)	136, 139, 167, 947
LweI	GCATC	3 cut(s)	619, 745, 887
MaeI	CTAG	2 cut(s)	677, 860
MaeII	ACGT	1 cut(s)	1114
MaeIII	GTNAC	4 cut(s)	664, 688, 712, 1039
MalI	GATC	8 cut(s)	17, 68, 93, 116, 432, 852, 885, 1089
MboI	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
MboII	GAAGA	4 cut(s)	53, 100, 802, 893
MflI	RGATCY	1 cut(s)	850
MhlI	GDGCHC	1 cut(s)	966
MluCI	AATT	6 cut(s)	102, 136, 199, 502, 781, 1071
MlyI	GAGTC	2 cut(s)	335, 374
MmeI	TCCRAC	4 cut(s)	294, 408, 471, 878
MnlI	CCTC	5 cut(s)	214, 266, 444, 621, 919
MroNI	GCCGGC	1 cut(s)	539
MseI	TTAA	5 cut(s)	6, 101, 395, 893, 1117
MspI	CCGG	1 cut(s)	540
MspR9I	CCNGG	1 cut(s)	806
MvaI	CCWGG	1 cut(s)	806
MvnI	CGCG	1 cut(s)	971
MwoI	GCNNNNNNNGC	4 cut(s)	155, 250, 320, 918
NaeI	GCCGGC	1 cut(s)	541
NcoI	CCATGG	1 cut(s)	76
NdeII	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
NgoMIV	GCCGGC	1 cut(s)	539
NlaIII	CATG	6 cut(s)	22, 80, 146, 813, 955, 1037
NlaIV	GGNNCC	3 cut(s)	451, 852, 1065
NmuCI	GTSAC	3 cut(s)	664, 712, 1039
NspI	RCATGY	1 cut(s)	1037
PaeI	GCATGC	1 cut(s)	1037
PaeR7I	CTCGAG	1 cut(s)	612
PdiI	GCCGGC	1 cut(s)	541
PfeI	GAWTC	4 cut(s)	494, 725, 866, 940
PkrI	GCNGC	5 cut(s)	151, 154, 157, 428, 937
PleI	GAGTC	2 cut(s)	335, 374
PpsI	GAGTC	2 cut(s)	335, 374
Psp6I	CCWGG	1 cut(s)	804
PspEI	GGTNACC	1 cut(s)	1039
PspGI	CCWGG	1 cut(s)	804
PspN4I	GGNNCC	3 cut(s)	451, 852, 1065
PspXI	VCTCGAGB	1 cut(s)	612
PstI	CTGCAG	1 cut(s)	157
PsuI	RGATCY	1 cut(s)	850
RigI	GGCCGGCC	1 cut(s)	543
RsaI	GTAC	2 cut(s)	299, 675
RsaNI	GTAC	2 cut(s)	298, 674
SaqAI	TTAA	5 cut(s)	6, 101, 395, 893, 1117
SatI	GCNGC	5 cut(s)	150, 153, 156, 427, 936
Sau3AI	GATC	8 cut(s)	15, 66, 91, 114, 430, 850, 883, 1087
SchI	GAGTC	2 cut(s)	335, 374
ScrFI	CCNGG	1 cut(s)	806
SduI	GDGCHC	1 cut(s)	966
SfaNI	GCATC	3 cut(s)	619, 745, 887
SfcI	CTRYAG	3 cut(s)	153, 274, 1023
Sfr274I	CTCGAG	1 cut(s)	612
SlaI	CTCGAG	1 cut(s)	612
SmlI	CTYRAG	2 cut(s)	205, 612
SmoI	CTYRAG	2 cut(s)	205, 612
SpeI	ACTAGT	1 cut(s)	676
SphI	GCATGC	1 cut(s)	1037
Sse9I	AATT	6 cut(s)	102, 136, 199, 502, 781, 1071
SsiI	CCGC	5 cut(s)	295, 426, 795, 969, 1037
SspI	AATATT	1 cut(s)	166
SspMI	CTAG	2 cut(s)	677, 860
StyD4I	CCNGG	1 cut(s)	804
StyI	CCWWGG	3 cut(s)	76, 375, 720
TaaI	ACNGT	5 cut(s)	670, 688, 712, 778, 891
TaiI	ACGT	1 cut(s)	1117
TaqI	TCGA	3 cut(s)	613, 728, 943
TasI	AATT	6 cut(s)	102, 136, 199, 502, 781, 1071
TauI	GCSGC	1 cut(s)	429
TfiI	GAWTC	4 cut(s)	494, 725, 866, 940
Tru1I	TTAA	5 cut(s)	6, 101, 395, 893, 1117
Tru9I	TTAA	5 cut(s)	6, 101, 395, 893, 1117
TscAI	CASTG	2 cut(s)	232, 675
TseFI	GTSAC	3 cut(s)	664, 712, 1039
TseI	GCWGC	4 cut(s)	149, 152, 155, 935
Tsp45I	GTSAC	3 cut(s)	664, 712, 1039
TspDTI	ATGAA	3 cut(s)	429, 858, 996
TspGWI	ACGGA	1 cut(s)	442
TspRI	CASTG	2 cut(s)	232, 675
XapI	RAATTY	2 cut(s)	781, 1071
XceI	RCATGY	1 cut(s)	1037
XhoI	CTCGAG	1 cut(s)	612
XspI	CTAG	2 cut(s)	677, 860

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.