FvH4_3g15120

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
9365362 .. 9369116
3755 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15120.t1

Sequence Viewer

Length: 2583 bp
ATGGTTAATGTGATGGTCATGTTTGCTGGTTTTCAAGATCATCAGAAGAGAGCCAAGCACCTTCTGATCATTAACCATGAGTTTAGGTTTGATCCATTCTTAATTTTCTTCCTGATCACTCTTTCATGCTTGTGGAGTTGTCATGTTGCTTCTGCAGCAGACAATATTGGGGACACACTCAAAATTGGTGACACTCTCAATTCCTCAAGTGCTCTAGTTTCTGCCTCCGGGAAGTTTACTTTGCTTTTCTTGCCAAACGGTTCAAGTTCCAACTACAGGTATCTAAATATCAGGCGGCAAAATGTAGCTGGTGCGAATAAGGCGTGGGTTGCCAACCGAGACTCACCTGTTTTATACCCTTTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAGATCATTACAAACAACAAAGGTGGCAGTGGCGATCCTCCTATAGTCCTTGGCTCTGCACCAATAAGTAGTAGTAATGTTGTGGCTACTCTGTTCGATTCTGGCAATTTTATCCTACAAGAGCTGAATTCTGACGGATCAACGAAGCAGATATGGTGGCAAAGTTTCGATCATCCGACGGACACATTTTTACCAGGCATGAAGTTAGGTGTCAACCGTAGCAATGGGCATATTTGGTCTCTTACGTCATGGACGTCTGCTTACTATCCACCGGCAGGAGCTTTCACCCTAGATTGGGATCCAACTGCCCGCCAATTGGAAATTCGGAGACAAGGGGTGGTTTACTGGAGGAGTGGAAACTATAGTGCTACAAGCAACAGATTCCAAAACATTATACCTAATGCAAAGGTTAGCTTCAAGTTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACACTTCTGAAGATGGTGGTGCATATGAGTTACCAGAATGGGTTCTAAATTATGATGGGAAGCTTTATAATTTTTATGGATTGGGAATTGATATTGCAAGAGCAGATCAGTGTGGAGGCTATGACACAGATGGAATAGGGTGCCAGACAAATGGCCGGCCAACTACTTGTACGACAGATTTTGGCAGTCCATTTGAGCCAAAAAAAGGTTACTTTCAACCAATCACCTCGAATTCAACTTCAAGGTGCCCTTACTCGCTCAACTTTGTATCAAATGGAAGTTACAGTGGTACTGGTATTGACTGTAAGAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGATAATCAGACTGGATGCCGTTTTTGGAGTGTGGGCTGTAAATTTGTTGAAGACAGCACTCGACCTGGAAATGCAAGCAGTTTGGTTTTAACAAAGCTAATGCCAACAGTAAAATCACCACCACCAATGTCAGCACCAAGCAAAAGTCGTGCAACGCGTAAATGGATTTGGATAGGGGTTGCTCTTAGTGTTGCTCTAGTGGTAATGGCGTTTTCCATCTTGTGCTATCTACAACAAAGAAGAAGAAAATCTAAACTTTCAGCTGAGGGTAAGATCGACCAGAACAACTTCCTGAACTTCAGGAATTCTAAGAGGCCGACTGATTTGCCTGGACTTCAAAATGATGGAAAGATGGGACATGATTTGAGTGTTTTTAGCTATGAATCTGTAATCTCTGCCACAATGAACTTCGCTGAAGAAAATAAGCTTGGAGAAGGGGGTTTTGGACCTGTTTATAAGGGGAAATTAGCAACGGGACAAGAAGTAGCTGTGAAAAGGCTTTCAAAATGTTCAGGGCAAGGAACATTAGAATTTAAGAATGAATTGATCCTCATATATGAACTTCAACATACAAACCTTGTTCAGCTTTTTGGATTTTGCATTCACGGTGAAGAGAAGATATTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATCCAATCAAAGGTGTATTTCTAGATTGGAGCAAGCGTTTCAGCATAATTGAAGGAATCGCTCAAGGATTGCTTTATCTGCACAAATTCTCCAGAAAAAGAGTAATTCATAGAGATCTAAAAGCTAGTAATGTATTACTTGATGCAAATATGAACCCCAAAATTTCGGATTTTGGTATGGCAAGGATTTTCTCCATTAATGAACTGGAAGCGAATACTAGTAGAATTGTTGGGACACGTGGTTACATGCCTCCTGAGTACGCGATGGAAGGAATTTTCTCTACTAAATCCGATGTCTACAGTTTCGGAGTGTTGGTGCTTGAAATCATAAGTGGTAGGAGGAACAATAGCTTCTACAATGATGTTCGTGCCATCAACTTAGCAGGATATGCTTGGGAGTTATGGAAAGAAGGCTTAGGAACACAACTAATGGATCCAACACTAGCTGACTCGTGTACTAACAAAGATAAACTGTTAAGATGCATCAATGTTGCTCTTCTATGCGTGGAGGATAGTGCAGCGAATCGACCTACCATGTCAGATGTGCTCTCCGGGTTGACAAATGAAAGCTCACCATTACCTGCCCCTACAAAGCCAGCATTTTCTACAGATAGATATGCGGTCACGAGTAGTATAGTTGAAGAGGAACCACGTATTTTATCTGTAAATGATCTGACTATTTCCGATTGTGATGGACGTTAA

Protein Analysis

861

Amino Acids

95.51

Weight (kDa)

7.43

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 216 5.8e-25 D-mannose binding lectin
Pkinase PF00069 542 - 742 1.9e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 544 - 754 3.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 924, 1668
AatII GACGTC 1 cut(s) 653
Acc36I ACCTGC 1 cut(s) 2470
AccB1I GGYRCC 2 cut(s) 996, 1101
AccI GTMKAC 1 cut(s) 2178
AccII CGCG 2 cut(s) 1369, 2144
AciI CCGC 3 cut(s) 295, 706, 2501
AclWI GGATC 9 cut(s) 86, 425, 541, 689, 702, 1753, 1877, 2309, 2322
AcoI YGGCCR 2 cut(s) 1009, 1013
AcsI RAATTY 9 cut(s) 523, 717, 1087, 1253, 1516, 1742, 1967, 2043, 2154
AcuI CTGAAG 3 cut(s) 885, 1495, 1647
AcvI CACGTG 1 cut(s) 2120
AcyI GRCGYC 1 cut(s) 650
AfaI GTAC 5 cut(s) 1027, 1147, 1847, 2141, 2338
AfiI CCNNNNNNNGG 7 cut(s) 276, 671, 690, 691, 712, 1061, 1892
AflIII ACRYGT 2 cut(s) 1367, 2117
AhlI ACTAGT 1 cut(s) 2099
AjnI CCWGG 3 cut(s) 589, 1276, 1540
AjuI GAANNNNNNNTTGG 6 cut(s) 702, 734, 1623, 1638, 1655, 1670
Alw21I GWGCWC 2 cut(s) 214, 2430
Alw26I GTCTC 3 cut(s) 333, 639, 718
AlwI GGATC 9 cut(s) 86, 425, 541, 689, 702, 1753, 1877, 2309, 2322
AoxI GGCC 3 cut(s) 1009, 1013, 1526
ApeKI GCWGC 2 cut(s) 155, 2399
ApoI RAATTY 9 cut(s) 523, 717, 1087, 1253, 1516, 1742, 1967, 2043, 2154
ArsI GACNNNNNNTTYG 2 cut(s) 1193, 1225
AseI ATTAAT 1 cut(s) 2079
Asp700I GAANNNNTTC 2 cut(s) 897, 1499
AspS9I GGNCC 1 cut(s) 1658
AsuC2I CCSGG 2 cut(s) 229, 2434
AsuHPI GGTGA 7 cut(s) 200, 336, 673, 1072, 1320, 1832, 2445
AvaII GGWCC 1 cut(s) 1658
BaeGI GKGCMC 1 cut(s) 1106
BamHI GGATCC 2 cut(s) 694, 2314
BanI GGYRCC 2 cut(s) 996, 1101
BauI CACGAG 2 cut(s) 2332, 2506
BbrPI CACGTG 1 cut(s) 2120
BbsI GAAGAC 2 cut(s) 849, 1269
Bbv12I GWGCWC 2 cut(s) 214, 2430
BbvCI CCTCAGC 1 cut(s) 1476
BbvI GCAGC 2 cut(s) 167, 2411
BceAI ACGGC 1 cut(s) 1215
BcgI CGANNNNNNTGC 2 cut(s) 1519, 1553
BciT130I CCWGG 3 cut(s) 591, 1278, 1542
BclI TGATCA 2 cut(s) 66, 114
BcnI CCSGG 2 cut(s) 229, 2434
BcoDI GTCTC 3 cut(s) 333, 639, 718
BcuI ACTAGT 1 cut(s) 2099
BfaI CTAG 7 cut(s) 215, 686, 1409, 1904, 2007, 2100, 2324
BfmI CTRYAG 6 cut(s) 153, 274, 438, 757, 2179, 2487
BfuAI ACCTGC 1 cut(s) 2470
BglII AGATCT 1 cut(s) 1996
BisI GCNGC 3 cut(s) 156, 296, 2400
BlsI GCNGC 3 cut(s) 157, 297, 2401
Bme1390I CCNGG 5 cut(s) 229, 591, 1278, 1542, 2434
Bme18I GGWCC 1 cut(s) 1658
BmgT120I GGNCC 1 cut(s) 1658
BmiI GGNNCC 5 cut(s) 696, 998, 1103, 2316, 2529
BmrFI CCNGG 5 cut(s) 229, 591, 1278, 1542, 2434
BmsI GCATC 4 cut(s) 1217, 2014, 2351, 2373
BpiI GAAGAC 2 cut(s) 849, 1269
BpmI CTGGAG 2 cut(s) 763, 1957
Bpu10I CCTNAGC 2 cut(s) 1476, 2296
BpuEI CTTGAG 2 cut(s) 190, 1929
BpuMI CCSGG 2 cut(s) 229, 2434
BsaAI YACGTR 2 cut(s) 2120, 2534
BsaBI GATNNNNATC 1 cut(s) 693
BsaHI GRCGYC 1 cut(s) 650
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 3 cut(s) 375, 445, 1192
BsaXI ACNNNNNCTCC 6 cut(s) 1903, 1933, 1955, 1985, 2181, 2211
Bsc4I CCNNNNNNNGG 7 cut(s) 276, 671, 690, 691, 712, 1061, 1892
Bse118I RCCGGY 2 cut(s) 667, 1011
Bse1I ACTGG 4 cut(s) 746, 1153, 1228, 2091
Bse3DI GCAATG 1 cut(s) 625
Bse8I GATNNNNATC 1 cut(s) 693
BseBI CCWGG 3 cut(s) 591, 1278, 1542
BseDI CCNNGG 3 cut(s) 375, 445, 1192
BseGI GGATG 2 cut(s) 568, 1232
BseJI GATNNNNATC 1 cut(s) 693
BseLI CCNNNNNNNGG 7 cut(s) 276, 671, 690, 691, 712, 1061, 1892
BseMI GCAATG 1 cut(s) 625
BseMII CTCAG 2 cut(s) 1467, 2127
BseNI ACTGG 4 cut(s) 746, 1153, 1228, 2091
BseRI GAGGAG 1 cut(s) 760
BseSI GKGCMC 1 cut(s) 1106
BseXI GCAGC 2 cut(s) 167, 2411
BsgI GTGCAG 3 cut(s) 438, 1946, 2418
Bsh1236I CGCG 2 cut(s) 1369, 2144
BshFI GGCC 3 cut(s) 1011, 1015, 1528
BshNI GGYRCC 2 cut(s) 996, 1101
BsiHKAI GWGCWC 2 cut(s) 214, 2430
BsiSI CCGG 4 cut(s) 228, 668, 1012, 2433
BslFI GGGAC 4 cut(s) 185, 1581, 1701, 2128
BslI CCNNNNNNNGG 7 cut(s) 276, 671, 690, 691, 712, 1061, 1892
BsmAI GTCTC 3 cut(s) 333, 639, 718
BsmFI GGGAC 4 cut(s) 185, 1581, 1701, 2128
BsmI GAATGC 1 cut(s) 1812
BsnI GGCC 3 cut(s) 1011, 1015, 1528
Bso31I GGTCTC 1 cut(s) 639
Bsp1286I GDGCHC 3 cut(s) 214, 1106, 2430
BspACI CCGC 3 cut(s) 295, 706, 2501
BspANI GGCC 3 cut(s) 1011, 1015, 1528
BspCNI CTCAG 2 cut(s) 1468, 2128
BspFNI CGCG 2 cut(s) 1369, 2144
BspLI GGNNCC 5 cut(s) 696, 998, 1103, 2316, 2529
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 1 cut(s) 2470
BspPI GGATC 9 cut(s) 86, 425, 541, 689, 702, 1753, 1877, 2309, 2322
BspQI GCTCTTC 1 cut(s) 2382
BspT107I GGYRCC 2 cut(s) 996, 1101
BspTNI GGTCTC 1 cut(s) 639
BsrDI GCAATG 1 cut(s) 625
BsrFI RCCGGY 2 cut(s) 667, 1011
BsrI ACTGG 4 cut(s) 746, 1153, 1228, 2091
BssAI RCCGGY 2 cut(s) 667, 1011
BssECI CCNNGG 3 cut(s) 375, 445, 1192
BssNI GRCGYC 1 cut(s) 650
BssSI CACGAG 2 cut(s) 2332, 2506
BssT1I CCWWGG 3 cut(s) 375, 445, 1192
Bst2BI CACGAG 2 cut(s) 2332, 2506
Bst2UI CCWGG 3 cut(s) 591, 1278, 1542
Bst4CI ACNGT 9 cut(s) 260, 614, 1142, 1160, 1184, 1321, 1820, 2183, 2355
Bst6I CTCTTC 4 cut(s) 41, 1818, 2382, 2517
BstACI GRCGYC 1 cut(s) 650
BstAPI GCANNNNNTGC 1 cut(s) 2270
BstBAI YACGTR 2 cut(s) 2120, 2534
BstC8I GCNNGC 5 cut(s) 706, 1013, 1288, 1916, 2478
BstDEI CTNAG 6 cut(s) 1397, 1476, 1521, 2136, 2260, 2296
BstF5I GGATG 2 cut(s) 568, 1232
BstFNI CGCG 2 cut(s) 1369, 2144
BstMAI GTCTC 3 cut(s) 333, 639, 718
BstMWI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 329, 1960, 2270
BstNI CCWGG 3 cut(s) 591, 1278, 1542
BstNSI RCATGY 2 cut(s) 1852, 2131
BstSCI CCNGG 5 cut(s) 227, 589, 1276, 1540, 2432
BstSFI CTRYAG 6 cut(s) 153, 274, 438, 757, 2179, 2487
BstSLI GKGCMC 1 cut(s) 1106
BstUI CGCG 2 cut(s) 1369, 2144
BstV1I GCAGC 2 cut(s) 167, 2411
BstV2I GAAGAC 2 cut(s) 849, 1269
BstX2I RGATCY 3 cut(s) 694, 1996, 2314
BstXI CCANNNNNNTGG 1 cut(s) 1007
BstYI RGATCY 3 cut(s) 694, 1996, 2314
BsuRI GGCC 3 cut(s) 1011, 1015, 1528
BtgZI GCGATG 1 cut(s) 2159
BtsCI GGATG 2 cut(s) 568, 1232
BtsI GCAGTG 1 cut(s) 430
BtsIMutI CAGTG 3 cut(s) 430, 971, 1147
BveI ACCTGC 1 cut(s) 2470
Cac8I GCNNGC 5 cut(s) 706, 1013, 1288, 1916, 2478
Cfr10I RCCGGY 2 cut(s) 667, 1011
Cfr13I GGNCC 1 cut(s) 1658
Csp6I GTAC 5 cut(s) 1026, 1146, 1846, 2140, 2337
CspCI CAANNNNNGTGG 2 cut(s) 400, 435
CviQI GTAC 5 cut(s) 1026, 1146, 1846, 2140, 2337
DdeI CTNAG 6 cut(s) 1397, 1476, 1521, 2136, 2260, 2296
EaeI YGGCCR 2 cut(s) 1009, 1013
Eam1104I CTCTTC 4 cut(s) 41, 1818, 2382, 2517
EarI CTCTTC 4 cut(s) 41, 1818, 2382, 2517
Eco130I CCWWGG 3 cut(s) 375, 445, 1192
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 1 cut(s) 1658
Eco57I CTGAAG 3 cut(s) 885, 1495, 1647
Eco72I CACGTG 1 cut(s) 2120
EcoRI GAATTC 3 cut(s) 523, 1087, 1516
EcoRII CCWGG 3 cut(s) 589, 1276, 1540
EcoT14I CCWWGG 3 cut(s) 375, 445, 1192
EcoT22I ATGCAT 1 cut(s) 2366
ErhI CCWWGG 3 cut(s) 375, 445, 1192
FalI AAGNNNNNCTT 6 cut(s) 794, 826, 1090, 1122, 1938, 1970
FaqI GGGAC 4 cut(s) 185, 1581, 1701, 2128
FauI CCCGC 1 cut(s) 713
FauNDI CATATG 1 cut(s) 880
FbaI TGATCA 2 cut(s) 66, 114
FblI GTMKAC 1 cut(s) 2178
Fnu4HI GCNGC 3 cut(s) 156, 296, 2400
FokI GGATG 2 cut(s) 555, 1239
FseI GGCCGGCC 1 cut(s) 1015
Fsp4HI GCNGC 3 cut(s) 156, 296, 2400
FspBI CTAG 7 cut(s) 215, 686, 1409, 1904, 2007, 2100, 2324
GluI GCNGC 3 cut(s) 156, 296, 2400
GsuI CTGGAG 2 cut(s) 763, 1957
HaeIII GGCC 3 cut(s) 1011, 1015, 1528
HapII CCGG 4 cut(s) 228, 668, 1012, 2433
Hin1I GRCGYC 1 cut(s) 650
HincII GTYRAC 2 cut(s) 610, 2439
HindII GTYRAC 2 cut(s) 610, 2439
HindIII AAGCTT 2 cut(s) 917, 1637
HinfI GANTC 9 cut(s) 341, 380, 494, 777, 1197, 1595, 1938, 2330, 2404
HpaII CCGG 4 cut(s) 228, 668, 1012, 2433
HphI GGTGA 7 cut(s) 200, 336, 673, 1072, 1320, 1832, 2445
Hpy166II GTNNAC 6 cut(s) 237, 610, 739, 2179, 2337, 2439
Hpy188III TCNNGA 9 cut(s) 35, 112, 1504, 1513, 1865, 1904, 1974, 2135, 2506
Hpy8I GTNNAC 6 cut(s) 237, 610, 739, 2179, 2337, 2439
Hpy99I CGWCG 1 cut(s) 577
HpyAV CCTTC 5 cut(s) 71, 1640, 1928, 2144, 2285
HpyCH4III ACNGT 9 cut(s) 260, 614, 1142, 1160, 1184, 1321, 1820, 2183, 2355
HpyCH4IV ACGT 5 cut(s) 641, 650, 2119, 2533, 2578
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 329, 1960, 2270
HpyF3I CTNAG 6 cut(s) 1397, 1476, 1521, 2136, 2260, 2296
HpySE526I ACGT 5 cut(s) 641, 650, 2119, 2533, 2578
Hsp92I GRCGYC 1 cut(s) 650
KroI GCCGGC 1 cut(s) 1011
KroNI GCCGGC 1 cut(s) 1013
Ksp22I TGATCA 2 cut(s) 66, 114
LguI GCTCTTC 1 cut(s) 2382
LmnI GCTCC 2 cut(s) 674, 1911
Lsp1109I GCAGC 2 cut(s) 167, 2411
LweI GCATC 4 cut(s) 1217, 2014, 2351, 2373
MaeI CTAG 7 cut(s) 215, 686, 1409, 1904, 2007, 2100, 2324
MaeII ACGT 5 cut(s) 641, 650, 2119, 2533, 2578
MaeIII GTNAC 7 cut(s) 188, 885, 1064, 1136, 1184, 2123, 2503
MfeI CAATTG 1 cut(s) 710
MflI RGATCY 3 cut(s) 694, 1996, 2314
MhlI GDGCHC 3 cut(s) 214, 1106, 2430
MluI ACGCGT 1 cut(s) 1367
MlyI GAGTC 3 cut(s) 335, 374, 2324
MmeI TCCRAC 5 cut(s) 294, 408, 596, 722, 2342
Mph1103I ATGCAT 1 cut(s) 2366
MroNI GCCGGC 1 cut(s) 1011
MroXI GAANNNNTTC 2 cut(s) 897, 1499
MseI TTAA 9 cut(s) 6, 72, 101, 395, 1301, 1746, 2079, 2357, 2581
MslI CAYNNNNRTG 1 cut(s) 130
MspA1I CMGCKG 1 cut(s) 1475
MspI CCGG 4 cut(s) 228, 668, 1012, 2433
MspR9I CCNGG 5 cut(s) 229, 591, 1278, 1542, 2434
MunI CAATTG 1 cut(s) 710
Mva1269I GAATGC 1 cut(s) 1812
MvaI CCWGG 3 cut(s) 591, 1278, 1542
MvnI CGCG 2 cut(s) 1369, 2144
MwoI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 329, 1960, 2270
NaeI GCCGGC 1 cut(s) 1013
NciI CCSGG 2 cut(s) 229, 2434
NdeI CATATG 1 cut(s) 880
NgoMIV GCCGGC 1 cut(s) 1011
NlaIV GGNNCC 5 cut(s) 696, 998, 1103, 2316, 2529
NmuCI GTSAC 3 cut(s) 188, 1184, 2503
NsiI ATGCAT 1 cut(s) 2366
NspI RCATGY 2 cut(s) 1852, 2131
PciSI GCTCTTC 1 cut(s) 2382
PcsI WCGNNNNNNNCGW 2 cut(s) 647, 1366
PctI GAATGC 1 cut(s) 1812
PdiI GCCGGC 1 cut(s) 1013
PdmI GAANNNNTTC 2 cut(s) 897, 1499
PfeI GAWTC 6 cut(s) 494, 777, 1197, 1595, 1938, 2404
PfoI TCCNGGA 1 cut(s) 227
PkrI GCNGC 3 cut(s) 157, 297, 2401
PleI GAGTC 3 cut(s) 335, 374, 2324
PmaCI CACGTG 1 cut(s) 2120
PmlI CACGTG 1 cut(s) 2120
PpsI GAGTC 3 cut(s) 335, 374, 2324
Ppu21I YACGTR 2 cut(s) 2120, 2534
PshBI ATTAAT 1 cut(s) 2079
PsiI TTATAA 2 cut(s) 924, 1668
Psp6I CCWGG 3 cut(s) 589, 1276, 1540
PspCI CACGTG 1 cut(s) 2120
PspGI CCWGG 3 cut(s) 589, 1276, 1540
PspN4I GGNNCC 5 cut(s) 696, 998, 1103, 2316, 2529
PspPI GGNCC 1 cut(s) 1658
PstI CTGCAG 1 cut(s) 157
PsuI RGATCY 3 cut(s) 694, 1996, 2314
PvuII CAGCTG 1 cut(s) 1475
RigI GGCCGGCC 1 cut(s) 1015
RsaI GTAC 5 cut(s) 1027, 1147, 1847, 2141, 2338
RsaNI GTAC 5 cut(s) 1026, 1146, 1846, 2140, 2337
RseI CAYNNNNRTG 1 cut(s) 130
SapI GCTCTTC 1 cut(s) 2382
SaqAI TTAA 9 cut(s) 6, 72, 101, 395, 1301, 1746, 2079, 2357, 2581
SatI GCNGC 3 cut(s) 156, 296, 2400
Sau96I GGNCC 1 cut(s) 1658
SchI GAGTC 3 cut(s) 335, 374, 2324
ScrFI CCNGG 5 cut(s) 229, 591, 1278, 1542, 2434
SduI GDGCHC 3 cut(s) 214, 1106, 2430
SfaNI GCATC 4 cut(s) 1217, 2014, 2351, 2373
SfcI CTRYAG 6 cut(s) 153, 274, 438, 757, 2179, 2487
SinI GGWCC 1 cut(s) 1658
SmiMI CAYNNNNRTG 1 cut(s) 130
SmlI CTYRAG 2 cut(s) 205, 1944
SmoI CTYRAG 2 cut(s) 205, 1944
SpeI ACTAGT 1 cut(s) 2099
SsiI CCGC 3 cut(s) 295, 706, 2501
SspI AATATT 1 cut(s) 166
SspMI CTAG 7 cut(s) 215, 686, 1409, 1904, 2007, 2100, 2324
StyD4I CCNGG 5 cut(s) 227, 589, 1276, 1540, 2432
StyI CCWWGG 3 cut(s) 375, 445, 1192
TaaI ACNGT 9 cut(s) 260, 614, 1142, 1160, 1184, 1321, 1820, 2183, 2355
TaiI ACGT 5 cut(s) 644, 653, 2122, 2536, 2581
TaqI TCGA 7 cut(s) 492, 564, 1085, 1200, 1273, 1488, 2407
TatI WGTACW 2 cut(s) 1845, 2336
TauI GCSGC 1 cut(s) 298
TfiI GAWTC 6 cut(s) 494, 777, 1197, 1595, 1938, 2404
Tru1I TTAA 9 cut(s) 6, 72, 101, 395, 1301, 1746, 2079, 2357, 2581
Tru9I TTAA 9 cut(s) 6, 72, 101, 395, 1301, 1746, 2079, 2357, 2581
TscAI CASTG 3 cut(s) 430, 971, 1147
TseFI GTSAC 3 cut(s) 188, 1184, 2503
TseI GCWGC 2 cut(s) 155, 2399
Tsp45I GTSAC 3 cut(s) 188, 1184, 2503
TspGWI ACGGA 2 cut(s) 546, 590
TspRI CASTG 3 cut(s) 430, 971, 1147
VpaK11BI GGWCC 1 cut(s) 1658
VspI ATTAAT 1 cut(s) 2079
XapI RAATTY 9 cut(s) 523, 717, 1087, 1253, 1516, 1742, 1967, 2043, 2154
XbaI TCTAGA 1 cut(s) 1903
XceI RCATGY 2 cut(s) 1852, 2131
XcmI CCANNNNNNNNNTGG 1 cut(s) 2083
XmiI GTMKAC 1 cut(s) 2178
XmnI GAANNNNTTC 2 cut(s) 897, 1499
XspI CTAG 7 cut(s) 215, 686, 1409, 1904, 2007, 2100, 2324
ZraI GACGTC 1 cut(s) 651
Zsp2I ATGCAT 1 cut(s) 2366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.