Rh4BG160700

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
28928383 .. 28943638
15256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG160700.1

Sequence Viewer

Length: 687 bp
ATGGCCAGTAGTCTCAAGTTAATATTCGTGATAGTCTTATCAAGCTTCTGGAATTGTCATGCTGCTGCAAGCAGGGACACGCTAAAACCAGGGGCTTTTACCCTTGATTGGGACCCTGAGGGACATGAATTGAAAATTAAGCGACGAGGGGTGGTTTACTGGTCTAGTGGAGTCTTCAGAAATATGAAGAGATTTCAATTCATTCTACCGCATGGATCGAAGCACCTCAGGTACAACTTTAGCTTTGTCTCAAATGAGAATGAAGACTACTTCACTTATACTAGGATATTAGATGATGATGATGATCAAAGTGATGAAGTATCAGAATGGGTGCTAACATCATTGGGACGACTATTGGACTTGACATCAGAAGTTTATATTGCACTAGCAGATAACTTTTATGGCTATAACACTACTGATGATGGGTGCCAACCGTGGCGGCAACCAAGTTGCAGGCATTTGGACAATACATTTGAGACTGGATGCAAGTTTTGGAACGGAACCTGGGAGTTCACTCAAGGCCTCTCTGGTTATAGTAGTTCAACTAATCTCTATTTTCTAACAACAAAAATATCTCCCAGTGGCTTGGGAGTTGTGGAAACAAGGTTCATGGCTAGAATTAATGGATTCAACTACGCTAGGCGATTCCTTTGTAAGAGAACAGCTGTTAAGATGCCTCCAAGTTAG

Protein Analysis

228

Amino Acids

26.28

Weight (kDa)

6.95

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 426
AciI CCGC 2 cut(s) 209, 439
AclWI GGATC 1 cut(s) 223
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 160
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 2 cut(s) 108, 109
AgsI TTSAA 4 cut(s) 133, 197, 543, 631
AjnI CCWGG 2 cut(s) 88, 503
AloI GAACNNNNNNTCC 2 cut(s) 590, 622
AluBI AGCT 3 cut(s) 45, 243, 665
AluI AGCT 3 cut(s) 45, 243, 665
Alw26I GTCTC 3 cut(s) 17, 253, 470
AlwI GGATC 1 cut(s) 223
AoxI GGCC 2 cut(s) 3, 520
ApeKI GCWGC 2 cut(s) 62, 65
ArsI GACNNNNNNTTYG 2 cut(s) 455, 487
AseI ATTAAT 1 cut(s) 621
AspS9I GGNCC 1 cut(s) 112
AvaII GGWCC 1 cut(s) 112
AxyI CCTNAGG 2 cut(s) 117, 227
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 426
BbsI GAAGAC 2 cut(s) 166, 270
BbvI GCAGC 2 cut(s) 49, 52
BccI CCATC 1 cut(s) 416
BciT130I CCWGG 2 cut(s) 90, 505
BclI TGATCA 1 cut(s) 304
BcoDI GTCTC 3 cut(s) 17, 253, 470
BfaI CTAG 5 cut(s) 165, 282, 386, 615, 639
BisI GCNGC 3 cut(s) 63, 66, 440
BlsI GCNGC 3 cut(s) 64, 67, 441
Bme1390I CCNGG 2 cut(s) 90, 505
Bme18I GGWCC 1 cut(s) 112
BmgT120I GGNCC 1 cut(s) 112
BmiI GGNNCC 4 cut(s) 113, 114, 428, 502
BmrFI CCNGG 2 cut(s) 90, 505
BmrI ACTGGG 1 cut(s) 573
BmsI GCATC 2 cut(s) 473, 663
BmuI ACTGGG 1 cut(s) 573
BpiI GAAGAC 2 cut(s) 166, 270
BpuEI CTTGAG 1 cut(s) 501
BsaBI GATNNNNATC 1 cut(s) 303
BsaJI CCNNGG 3 cut(s) 89, 434, 504
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 109
Bse1I ACTGG 4 cut(s) 6, 164, 484, 579
Bse21I CCTNAGG 2 cut(s) 117, 227
Bse8I GATNNNNATC 1 cut(s) 303
BseBI CCWGG 2 cut(s) 90, 505
BseDI CCNNGG 3 cut(s) 89, 434, 504
BseGI GGATG 1 cut(s) 488
BseJI GATNNNNATC 1 cut(s) 303
BseLI CCNNNNNNNGG 2 cut(s) 108, 109
BseMII CTCAG 2 cut(s) 108, 241
BseNI ACTGG 4 cut(s) 6, 164, 484, 579
BseXI GCAGC 2 cut(s) 49, 52
BshFI GGCC 2 cut(s) 5, 522
BshNI GGYRCC 1 cut(s) 426
BslFI GGGAC 4 cut(s) 89, 125, 135, 360
BslI CCNNNNNNNGG 2 cut(s) 108, 109
BsmAI GTCTC 3 cut(s) 17, 253, 470
BsmFI GGGAC 4 cut(s) 89, 125, 135, 360
BsnI GGCC 2 cut(s) 5, 522
Bsp143I GATC 2 cut(s) 215, 304
BspACI CCGC 2 cut(s) 209, 439
BspANI GGCC 2 cut(s) 5, 522
BspCNI CTCAG 2 cut(s) 109, 240
BspLI GGNNCC 4 cut(s) 113, 114, 428, 502
BspPI GGATC 1 cut(s) 223
BspT107I GGYRCC 1 cut(s) 426
BsrI ACTGG 4 cut(s) 6, 164, 484, 579
BssECI CCNNGG 3 cut(s) 89, 434, 504
BssMI GATC 2 cut(s) 215, 304
Bst2UI CCWGG 2 cut(s) 90, 505
Bst4CI ACNGT 1 cut(s) 435
Bst6I CTCTTC 1 cut(s) 182
BstC8I GCNNGC 2 cut(s) 70, 455
BstDEI CTNAG 2 cut(s) 117, 227
BstDSI CCRYGG 1 cut(s) 434
BstF5I GGATG 1 cut(s) 488
BstKTI GATC 2 cut(s) 218, 307
BstMAI GTCTC 3 cut(s) 17, 253, 470
BstMBI GATC 2 cut(s) 215, 304
BstNI CCWGG 2 cut(s) 90, 505
BstSCI CCNGG 2 cut(s) 88, 503
BstV1I GCAGC 2 cut(s) 49, 52
BstV2I GAAGAC 2 cut(s) 166, 270
BstXI CCANNNNNNTGG 1 cut(s) 586
Bsu36I CCTNAGG 2 cut(s) 117, 227
BsuRI GGCC 2 cut(s) 5, 522
BtgI CCRYGG 1 cut(s) 434
BtsCI GGATG 1 cut(s) 488
BtsIMutI CAGTG 1 cut(s) 586
Cac8I GCNNGC 2 cut(s) 70, 455
Cfr13I GGNCC 1 cut(s) 112
Csp6I GTAC 1 cut(s) 232
CviAII CATG 4 cut(s) 59, 125, 212, 610
CviJI RGCY 9 cut(s) 5, 45, 95, 243, 405, 522, 585, 614, 665
CviKI_1 RGCY 9 cut(s) 5, 45, 95, 243, 405, 522, 585, 614, 665
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 2 cut(s) 117, 227
DpnI GATC 2 cut(s) 217, 306
DpnII GATC 2 cut(s) 215, 304
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 182
EarI CTCTTC 1 cut(s) 182
Eco147I AGGCCT 1 cut(s) 522
Eco47I GGWCC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 160
Eco81I CCTNAGG 2 cut(s) 117, 227
EcoO109I RGGNCCY 1 cut(s) 112
EcoRII CCWGG 2 cut(s) 88, 503
FaeI CATG 4 cut(s) 62, 128, 215, 613
FaqI GGGAC 4 cut(s) 89, 125, 135, 360
FatI CATG 4 cut(s) 58, 124, 211, 609
FbaI TGATCA 1 cut(s) 304
Fnu4HI GCNGC 3 cut(s) 63, 66, 440
FokI GGATG 1 cut(s) 495
Fsp4HI GCNGC 3 cut(s) 63, 66, 440
FspBI CTAG 5 cut(s) 165, 282, 386, 615, 639
GluI GCNGC 3 cut(s) 63, 66, 440
HaeIII GGCC 2 cut(s) 5, 522
Hin1II CATG 4 cut(s) 62, 128, 215, 613
HindIII AAGCTT 1 cut(s) 43
HinfI GANTC 3 cut(s) 171, 627, 645
Hpy166II GTNNAC 2 cut(s) 157, 513
Hpy188I TCNGA 3 cut(s) 179, 325, 370
Hpy188III TCNNGA 2 cut(s) 28, 49
Hpy8I GTNNAC 2 cut(s) 157, 513
Hpy99I CGWCG 1 cut(s) 147
HpyCH4III ACNGT 1 cut(s) 435
HpyCH4V TGCA 4 cut(s) 68, 383, 453, 486
HpyF3I CTNAG 2 cut(s) 117, 227
Hsp92II CATG 4 cut(s) 62, 128, 215, 613
KflI GGGWCCC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 2 cut(s) 215, 304
Lsp1109I GCAGC 2 cut(s) 49, 52
LweI GCATC 2 cut(s) 473, 663
MaeI CTAG 5 cut(s) 165, 282, 386, 615, 639
MalI GATC 2 cut(s) 217, 306
MboI GATC 2 cut(s) 215, 304
MboII GAAGA 3 cut(s) 166, 199, 275
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 52, 128, 135, 197, 618
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 180
MnlI CCTC 5 cut(s) 112, 140, 236, 533, 687
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 20, 138, 621, 669
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 665
MspR9I CCNGG 2 cut(s) 90, 505
MvaI CCWGG 2 cut(s) 90, 505
NdeII GATC 2 cut(s) 215, 304
NlaIII CATG 4 cut(s) 62, 128, 215, 613
NlaIV GGNNCC 4 cut(s) 113, 114, 428, 502
PceI AGGCCT 1 cut(s) 522
PfeI GAWTC 2 cut(s) 627, 645
PkrI GCNGC 3 cut(s) 64, 67, 441
PleI GAGTC 1 cut(s) 179
PpsI GAGTC 1 cut(s) 179
PpuMI RGGWCCY 1 cut(s) 112
PshBI ATTAAT 1 cut(s) 621
Psp5II RGGWCCY 1 cut(s) 112
Psp6I CCWGG 2 cut(s) 88, 503
PspGI CCWGG 2 cut(s) 88, 503
PspN4I GGNNCC 4 cut(s) 113, 114, 428, 502
PspPI GGNCC 1 cut(s) 112
PspPPI RGGWCCY 1 cut(s) 112
PvuII CAGCTG 1 cut(s) 665
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
SaqAI TTAA 4 cut(s) 20, 138, 621, 669
SatI GCNGC 3 cut(s) 63, 66, 440
Sau3AI GATC 2 cut(s) 215, 304
Sau96I GGNCC 1 cut(s) 112
SchI GAGTC 1 cut(s) 180
ScrFI CCNGG 2 cut(s) 90, 505
SetI ASST 7 cut(s) 47, 228, 233, 245, 506, 608, 667
SfaNI GCATC 2 cut(s) 473, 663
SinI GGWCC 1 cut(s) 112
SmlI CTYRAG 2 cut(s) 14, 516
SmoI CTYRAG 2 cut(s) 14, 516
Sse9I AATT 5 cut(s) 52, 128, 135, 197, 618
SseBI AGGCCT 1 cut(s) 522
SsiI CCGC 2 cut(s) 209, 439
SspI AATATT 1 cut(s) 24
SspMI CTAG 5 cut(s) 165, 282, 386, 615, 639
StuI AGGCCT 1 cut(s) 522
StyD4I CCNGG 2 cut(s) 88, 503
TaaI ACNGT 1 cut(s) 435
TaqI TCGA 1 cut(s) 218
TasI AATT 5 cut(s) 52, 128, 135, 197, 618
TauI GCSGC 1 cut(s) 442
TfiI GAWTC 2 cut(s) 627, 645
Tru1I TTAA 4 cut(s) 20, 138, 621, 669
Tru9I TTAA 4 cut(s) 20, 138, 621, 669
TscAI CASTG 1 cut(s) 586
TseI GCWGC 2 cut(s) 62, 65
TspDTI ATGAA 6 cut(s) 141, 190, 200, 276, 330, 598
TspGWI ACGGA 1 cut(s) 513
TspRI CASTG 1 cut(s) 586
VpaK11BI GGWCC 1 cut(s) 112
VspI ATTAAT 1 cut(s) 621
XspI CTAG 5 cut(s) 165, 282, 386, 615, 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.