Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Forward (+)

75045605 .. 75048217

Gene Structure 2613 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00053840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGTTAATGTGATGATCATGTTTGCTGGTTTTCAAGATCATCAGGAGAAAGCAAAGTACCGTCTGATCATTAACCATGGGTTTAGGTTTAATCAACTCTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGAGTTGTTGTGTTGCTGCTGCAGCAGACAATATTCGGGACACACTCAAAATTGGCGACAGTCTCAATTCCTCAAGTGCTTTGGTTTCTGCCTCTGGGAAGTTCACTTTGCTTTTCTTGCCAAACGGTTCGAGTTCCAACTACAGCTATCTATATATTAGGCGGTACAATGTAAGTGGTGCGAATAAGGCTTGGGTTGGGAACCGAGACTCACCTGTTTTATACCCACTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAAATCATTACAAACAACGAAGGTGGCGGTGGCGATCCTCCTATAGTGCTTGGCTCCGCGCCAAAGAGTAGTAGTAATGTTGCGGCTACTCTGTCGGATTCTGGCAATTTTATCCTACAAGAGCTGAACTCCGATGGATCAATGAAGAAGGTGTGGTGGCAAAGCTTTGATTATCCAACAGACACCTTTTTACCAGGCATGAAGTTGGGTGTCAATCATAGCAATGGGCACATCTGGTCTCTTACATCATGGACATCCGCTTACTACCCACCGGCGGGGCCTTTCACTCTAGATTGGGACCCAACTGCCCGCCAAATGGAAATTCGGAGAGAAGGGGTGGTTTATTGGAGAAGCGGAAACTATAGTGCTACTACCAACAGATTCCAAAACATTTTGCCGAATGCAAAGGTTAGCTTCAAATTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACAGTTCTGAAGATGGTGCATATGAGTCACCAGAATGGTTTCTAAATTTCGATGGGAGGCTTTCTAATTATTATGGAGCGGGAATTGATATTGCACGAGCAGATCAGTGTGGCGGCTACAGCACAGATGAACTAGGGTGCCAGACAAGTGGCCGGCCAACTACTTGTATGGCAGATTTCGGCAGTCCATTTGTGCCAAAAAAAGGTTATTTTCAACCAGTCACCTCGAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAACGGAAGTTACAGTGGTACTAGTATTGATTGTAAGAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGATAATCAGACAGGATGCCGATTTTGGAGTGTGGACTGTGAATTCGTTGAAGACCGCACTCAACCTGGTAATGCAAGCAGTTTGGTTTTAACAAAGCTAATGCCAACAGCAAAATCACCAGCGCCAAAGTCACCGCCAAGCAAAAGTGGTGAGGGTGAGATCGACCAGAATGAATTGCTGAACTTCAGGAATTCTAAGAGGCCTACTGATTTGAATGGACTTCAAAATGTTGGAAAGACGGGCCATGATTTGAGCATATTTAGCTATGCATCTGTGATGGCTGCCACAATCAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGCGGCTTTGGACCTGTCTATAAGGGGAAATTGGCAACGGGAGAAGAAGTAGCTGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACATTAGAGTTTAAGAATGAATTGATCCTCATATATGAACTTCAACACACAAACCTTGTTCAGCTTTTTGGATTTTGCATTCACGGTGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATTCAGTCAGAGGTGTTTTTCTAGATTGGAGCAAGCGTTTCAGTATAATTGAAGGAATTGCTCAAGGATTGCTTTATTTGCACAAATTCTCAAGAACAAGAGTAATTCATAGAGATTTAAAAGCCAGTAACGTACTACTTGATGAAAATATGAAACCCAAAATTTCAGATTTTGGTATGGCTAGGATTTTCTCCATTAATGAACTGGAAGCAAATACTAGTAGGATTGTTGGGACACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

668

Amino Acids

74.17

Weight (kDa)

6.2

Isoelectric Point (pI)

36.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	109 - 216	1.2e-23	D-mannose binding lectin
Pkinase	PF00069	503 - 667	5e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	505 - 653	2e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	993
AccBSI	CCGCTC	1 cut(s)	935
AccII	CGCG	1 cut(s)	455
AclWI	GGATC	3 cut(s)	425, 541, 1636
AcoI	YGGCCR	2 cut(s)	1006, 1010
AcsI	RAATTY	7 cut(s)	717, 815, 901, 1250, 1399, 1850, 1926
AcuI	CTGAAG	3 cut(s)	885, 1378, 1530
AfaI	GTAC	5 cut(s)	59, 299, 1144, 1730, 1899
AfiI	CCNNNNNNNGG	4 cut(s)	670, 671, 712, 1058
AhlI	ACTAGT	2 cut(s)	1145, 1982
AjnI	CCWGG	2 cut(s)	589, 1273
AjuI	GAANNNNNNNTTGG	6 cut(s)	702, 734, 1506, 1521, 1538, 1553
Alw26I	GTCTC	3 cut(s)	200, 333, 639
AlwI	GGATC	3 cut(s)	425, 541, 1636
Ama87I	CYCGRG	1 cut(s)	1081
AoxI	GGCC	5 cut(s)	674, 1006, 1010, 1409, 1450
ApeKI	GCWGC	4 cut(s)	149, 152, 155, 1490
ApoI	RAATTY	7 cut(s)	717, 815, 901, 1250, 1399, 1850, 1926
ArsI	GACNNNNNNTTYG	4 cut(s)	1190, 1222, 1235, 1267
AseI	ATTAAT	1 cut(s)	1962
Asp700I	GAANNNNTTC	1 cut(s)	894
AspLEI	GCGC	2 cut(s)	457, 1333
AspS9I	GGNCC	4 cut(s)	674, 694, 1450, 1541
AsuHPI	GGTGA	8 cut(s)	336, 876, 1069, 1317, 1332, 1370, 1376, 1715
AvaI	CYCGRG	1 cut(s)	1081
AvaII	GGWCC	2 cut(s)	694, 1541
BaeGI	GKGCMC	1 cut(s)	627
BanI	GGYRCC	1 cut(s)	993
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	2 cut(s)	849, 1266
BbvI	GCAGC	4 cut(s)	136, 139, 167, 1477
BccI	CCATC	4 cut(s)	524, 863, 902, 1480
BciT130I	CCWGG	2 cut(s)	591, 1275
BclI	TGATCA	3 cut(s)	15, 66, 114
BcoDI	GTCTC	3 cut(s)	200, 333, 639
BcuI	ACTAGT	2 cut(s)	1145, 1982
BfaI	CTAG	6 cut(s)	686, 989, 1146, 1787, 1947, 1983
BfmI	CTRYAG	5 cut(s)	153, 274, 438, 757, 973
BfoI	RGCGCY	1 cut(s)	1334
BisI	GCNGC	7 cut(s)	150, 153, 156, 480, 970, 1491, 1534
BlsI	GCNGC	7 cut(s)	151, 154, 157, 481, 971, 1492, 1535
Bme1390I	CCNGG	2 cut(s)	591, 1275
Bme18I	GGWCC	2 cut(s)	694, 1541
BmeT110I	CYCGRG	1 cut(s)	1081
BmgT120I	GGNCC	4 cut(s)	674, 694, 1450, 1541
BmiI	GGNNCC	6 cut(s)	335, 451, 675, 695, 696, 995
BmrFI	CCNGG	2 cut(s)	591, 1275
BmsI	GCATC	3 cut(s)	1088, 1214, 1487
BpiI	GAAGAC	2 cut(s)	849, 1266
BplI	GAGNNNNNCTC	2 cut(s)	509, 541
BpuEI	CTTGAG	3 cut(s)	190, 1812, 1840
BsaI	GGTCTC	1 cut(s)	639
BsaJI	CCNNGG	3 cut(s)	76, 375, 1189
BsaXI	ACNNNNNCTCC	6 cut(s)	127, 157, 1563, 1593, 1786, 1816
Bsc4I	CCNNNNNNNGG	4 cut(s)	670, 671, 712, 1058
Bse118I	RCCGGY	2 cut(s)	667, 1008
Bse1I	ACTGG	3 cut(s)	1073, 1890, 1974
Bse3DI	GCAATG	1 cut(s)	625
BseBI	CCWGG	2 cut(s)	591, 1275
BseDI	CCNNGG	3 cut(s)	76, 375, 1189
BseGI	GGATG	3 cut(s)	650, 1229, 1719
BseLI	CCNNNNNNNGG	4 cut(s)	670, 671, 712, 1058
BseMI	GCAATG	1 cut(s)	625
BseNI	ACTGG	3 cut(s)	1073, 1890, 1974
BseSI	GKGCMC	1 cut(s)	627
BseXI	GCAGC	4 cut(s)	136, 139, 167, 1477
Bsh1236I	CGCG	1 cut(s)	455
BshFI	GGCC	5 cut(s)	676, 1008, 1012, 1411, 1452
BshNI	GGYRCC	1 cut(s)	993
BsiHKCI	CYCGRG	1 cut(s)	1081
BsiSI	CCGG	2 cut(s)	668, 1009
BslFI	GGGAC	2 cut(s)	185, 707
BslI	CCNNNNNNNGG	4 cut(s)	670, 671, 712, 1058
BsmAI	GTCTC	3 cut(s)	200, 333, 639
BsmFI	GGGAC	2 cut(s)	185, 707
BsmI	GAATGC	2 cut(s)	802, 1695
BsnI	GGCC	5 cut(s)	676, 1008, 1012, 1411, 1452
Bso31I	GGTCTC	1 cut(s)	639
BsoBI	CYCGRG	1 cut(s)	1081
Bsp1286I	GDGCHC	1 cut(s)	627
Bsp143I	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
Bsp19I	CCATGG	1 cut(s)	76
BspANI	GGCC	5 cut(s)	676, 1008, 1012, 1411, 1452
BspFNI	CGCG	1 cut(s)	455
BspLI	GGNNCC	6 cut(s)	335, 451, 675, 695, 696, 995
BspMAI	CTGCAG	1 cut(s)	157
BspPI	GGATC	3 cut(s)	425, 541, 1636
BspT107I	GGYRCC	1 cut(s)	993
BspTNI	GGTCTC	1 cut(s)	639
BsrBI	CCGCTC	1 cut(s)	935
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	2 cut(s)	667, 1008
BsrI	ACTGG	3 cut(s)	1073, 1890, 1974
BssAI	RCCGGY	2 cut(s)	667, 1008
BssECI	CCNNGG	3 cut(s)	76, 375, 1189
BssMI	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	3 cut(s)	76, 375, 1189
Bst2BI	CACGAG	1 cut(s)	951
Bst2UI	CCWGG	2 cut(s)	591, 1275
Bst4CI	ACNGT	9 cut(s)	62, 194, 260, 860, 1139, 1181, 1247, 1703, 2004
Bst6I	CTCTTC	2 cut(s)	1583, 1701
BstC8I	GCNNGC	4 cut(s)	706, 1010, 1285, 1799
BstDEI	CTNAG	1 cut(s)	1404
BstDSI	CCRYGG	1 cut(s)	76
BstF5I	GGATG	3 cut(s)	650, 1229, 1719
BstFNI	CGCG	1 cut(s)	455
BstH2I	RGCGCY	1 cut(s)	1334
BstHHI	GCGC	2 cut(s)	457, 1333
BstKTI	GATC	9 cut(s)	18, 40, 69, 117, 433, 536, 961, 1371, 1644
BstMAI	GTCTC	3 cut(s)	200, 333, 639
BstMBI	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
BstMWI	GCNNNNNNNGC	6 cut(s)	155, 250, 320, 975, 1470, 1843
BstNI	CCWGG	2 cut(s)	591, 1275
BstNSI	RCATGY	1 cut(s)	1735
BstSCI	CCNGG	2 cut(s)	589, 1273
BstSFI	CTRYAG	5 cut(s)	153, 274, 438, 757, 973
BstSLI	GKGCMC	1 cut(s)	627
BstUI	CGCG	1 cut(s)	455
BstV1I	GCAGC	4 cut(s)	136, 139, 167, 1477
BstV2I	GAAGAC	2 cut(s)	849, 1266
BstXI	CCANNNNNNTGG	1 cut(s)	1004
BsuRI	GGCC	5 cut(s)	676, 1008, 1012, 1411, 1452
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	3 cut(s)	650, 1229, 1719
BtsIMutI	CAGTG	2 cut(s)	968, 1144
Cac8I	GCNNGC	4 cut(s)	706, 1010, 1285, 1799
CfoI	GCGC	2 cut(s)	457, 1333
Cfr10I	RCCGGY	2 cut(s)	667, 1008
Cfr13I	GGNCC	4 cut(s)	674, 694, 1450, 1541
CsiI	ACCWGGT	1 cut(s)	1273
Csp6I	GTAC	5 cut(s)	58, 298, 1143, 1729, 1898
CspCI	CAANNNNNGTGG	4 cut(s)	289, 324, 400, 435
CviAII	CATG	6 cut(s)	19, 77, 595, 645, 1454, 1732
CviQI	GTAC	5 cut(s)	58, 298, 1143, 1729, 1898
DdeI	CTNAG	1 cut(s)	1404
DpnI	GATC	9 cut(s)	17, 39, 68, 116, 432, 535, 960, 1370, 1643
DpnII	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
DraI	TTTAAA	1 cut(s)	1884
EaeI	YGGCCR	2 cut(s)	1006, 1010
Eam1104I	CTCTTC	2 cut(s)	1583, 1701
EarI	CTCTTC	2 cut(s)	1583, 1701
Eco130I	CCWWGG	3 cut(s)	76, 375, 1189
Eco147I	AGGCCT	1 cut(s)	1411
Eco31I	GGTCTC	1 cut(s)	639
Eco47I	GGWCC	2 cut(s)	694, 1541
Eco57I	CTGAAG	3 cut(s)	885, 1378, 1530
Eco88I	CYCGRG	1 cut(s)	1081
EcoO109I	RGGNCCY	2 cut(s)	674, 694
EcoRI	GAATTC	2 cut(s)	1250, 1399
EcoRII	CCWGG	2 cut(s)	589, 1273
EcoT14I	CCWWGG	3 cut(s)	76, 375, 1189
EcoT22I	ATGCAT	1 cut(s)	1480
ErhI	CCWWGG	3 cut(s)	76, 375, 1189
FaeI	CATG	6 cut(s)	22, 80, 598, 648, 1457, 1735
FalI	AAGNNNNNCTT	4 cut(s)	794, 826, 1821, 1853
FaqI	GGGAC	2 cut(s)	185, 707
FatI	CATG	6 cut(s)	18, 76, 594, 644, 1453, 1731
FauI	CCCGC	3 cut(s)	664, 713, 928
FauNDI	CATATG	1 cut(s)	877
FbaI	TGATCA	3 cut(s)	15, 66, 114
Fnu4HI	GCNGC	7 cut(s)	150, 153, 156, 480, 970, 1491, 1534
FokI	GGATG	3 cut(s)	637, 1236, 1726
FseI	GGCCGGCC	1 cut(s)	1012
Fsp4HI	GCNGC	7 cut(s)	150, 153, 156, 480, 970, 1491, 1534
FspBI	CTAG	6 cut(s)	686, 989, 1146, 1787, 1947, 1983
GlaI	GCGC	2 cut(s)	456, 1332
GluI	GCNGC	7 cut(s)	150, 153, 156, 480, 970, 1491, 1534
HaeII	RGCGCY	1 cut(s)	1334
HaeIII	GGCC	5 cut(s)	676, 1008, 1012, 1411, 1452
HapII	CCGG	2 cut(s)	668, 1009
HhaI	GCGC	2 cut(s)	457, 1333
Hin1II	CATG	6 cut(s)	22, 80, 598, 648, 1457, 1735
Hin6I	GCGC	2 cut(s)	455, 1331
HinP1I	GCGC	2 cut(s)	455, 1331
HindIII	AAGCTT	3 cut(s)	127, 559, 1520
HinfI	GANTC	7 cut(s)	341, 380, 494, 777, 881, 1194, 1766
HpaII	CCGG	2 cut(s)	668, 1009
HphI	GGTGA	8 cut(s)	336, 876, 1069, 1317, 1332, 1370, 1376, 1715
Hpy166II	GTNNAC	2 cut(s)	237, 1243
Hpy188I	TCNGA	8 cut(s)	66, 493, 529, 723, 865, 1218, 1775, 1933
Hpy8I	GTNNAC	2 cut(s)	237, 1243
HpyAV	CCTTC	5 cut(s)	410, 538, 722, 1523, 1811
HpyCH4III	ACNGT	9 cut(s)	62, 194, 260, 860, 1139, 1181, 1247, 1703, 2004
HpyCH4IV	ACGT	1 cut(s)	1896
HpyCH4V	TGCA	9 cut(s)	155, 800, 875, 950, 1174, 1283, 1478, 1695, 1846
HpyF10VI	GCNNNNNNNGC	6 cut(s)	155, 250, 320, 975, 1470, 1843
HpyF3I	CTNAG	1 cut(s)	1404
HpySE526I	ACGT	1 cut(s)	1896
Hsp92II	CATG	6 cut(s)	22, 80, 598, 648, 1457, 1735
HspAI	GCGC	2 cut(s)	455, 1331
KflI	GGGWCCC	1 cut(s)	694
KroI	GCCGGC	1 cut(s)	1008
KroNI	GCCGGC	1 cut(s)	1010
Ksp22I	TGATCA	3 cut(s)	15, 66, 114
Kzo9I	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
LmnI	GCTCC	3 cut(s)	455, 932, 1794
Lsp1109I	GCAGC	4 cut(s)	136, 139, 167, 1477
LweI	GCATC	3 cut(s)	1088, 1214, 1487
MabI	ACCWGGT	1 cut(s)	1273
MaeI	CTAG	6 cut(s)	686, 989, 1146, 1787, 1947, 1983
MaeII	ACGT	1 cut(s)	1896
MaeIII	GTNAC	6 cut(s)	882, 1075, 1133, 1181, 1338, 1892
MalI	GATC	9 cut(s)	17, 39, 68, 116, 432, 535, 960, 1370, 1643
MbiI	CCGCTC	1 cut(s)	935
MboI	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
MboII	GAAGA	9 cut(s)	100, 553, 854, 878, 1271, 1523, 1586, 1600, 1718
MhlI	GDGCHC	1 cut(s)	627
MlyI	GAGTC	3 cut(s)	335, 374, 890
MmeI	TCCRAC	5 cut(s)	294, 408, 471, 596, 1420
Mph1103I	ATGCAT	1 cut(s)	1480
MroNI	GCCGGC	1 cut(s)	1008
MroXI	GAANNNNTTC	1 cut(s)	894
MseI	TTAA	9 cut(s)	6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
MslI	CAYNNNNRTG	2 cut(s)	618, 889
MspI	CCGG	2 cut(s)	668, 1009
MspR9I	CCNGG	2 cut(s)	591, 1275
Mva1269I	GAATGC	2 cut(s)	802, 1695
MvaI	CCWGG	2 cut(s)	591, 1275
MvnI	CGCG	1 cut(s)	455
MwoI	GCNNNNNNNGC	6 cut(s)	155, 250, 320, 975, 1470, 1843
NaeI	GCCGGC	1 cut(s)	1010
NcoI	CCATGG	1 cut(s)	76
NdeI	CATATG	1 cut(s)	877
NdeII	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
NgoMIV	GCCGGC	1 cut(s)	1008
NlaIII	CATG	6 cut(s)	22, 80, 598, 648, 1457, 1735
NlaIV	GGNNCC	6 cut(s)	335, 451, 675, 695, 696, 995
NmuCI	GTSAC	4 cut(s)	882, 1075, 1181, 1338
NsiI	ATGCAT	1 cut(s)	1480
NspI	RCATGY	1 cut(s)	1735
PaeR7I	CTCGAG	1 cut(s)	1081
PceI	AGGCCT	1 cut(s)	1411
PctI	GAATGC	2 cut(s)	802, 1695
PdiI	GCCGGC	1 cut(s)	1010
PdmI	GAANNNNTTC	1 cut(s)	894
PfeI	GAWTC	4 cut(s)	494, 777, 1194, 1766
PkrI	GCNGC	7 cut(s)	151, 154, 157, 481, 971, 1492, 1535
PleI	GAGTC	3 cut(s)	335, 374, 889
PpsI	GAGTC	3 cut(s)	335, 374, 889
PpuMI	RGGWCCY	1 cut(s)	694
PshBI	ATTAAT	1 cut(s)	1962
Psp5II	RGGWCCY	1 cut(s)	694
Psp6I	CCWGG	2 cut(s)	589, 1273
PspGI	CCWGG	2 cut(s)	589, 1273
PspN4I	GGNNCC	6 cut(s)	335, 451, 675, 695, 696, 995
PspPI	GGNCC	4 cut(s)	674, 694, 1450, 1541
PspPPI	RGGWCCY	1 cut(s)	694
PspXI	VCTCGAGB	1 cut(s)	1081
PstI	CTGCAG	1 cut(s)	157
RigI	GGCCGGCC	1 cut(s)	1012
RsaI	GTAC	5 cut(s)	59, 299, 1144, 1730, 1899
RsaNI	GTAC	5 cut(s)	58, 298, 1143, 1729, 1898
RseI	CAYNNNNRTG	2 cut(s)	618, 889
SaqAI	TTAA	9 cut(s)	6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
SatI	GCNGC	7 cut(s)	150, 153, 156, 480, 970, 1491, 1534
Sau3AI	GATC	9 cut(s)	15, 37, 66, 114, 430, 533, 958, 1368, 1641
Sau96I	GGNCC	4 cut(s)	674, 694, 1450, 1541
SchI	GAGTC	3 cut(s)	335, 374, 890
ScrFI	CCNGG	2 cut(s)	591, 1275
SduI	GDGCHC	1 cut(s)	627
SexAI	ACCWGGT	1 cut(s)	1273
SfaNI	GCATC	3 cut(s)	1088, 1214, 1487
SfcI	CTRYAG	5 cut(s)	153, 274, 438, 757, 973
Sfr274I	CTCGAG	1 cut(s)	1081
SgrAI	CRCCGGYG	1 cut(s)	667
SinI	GGWCC	2 cut(s)	694, 1541
SlaI	CTCGAG	1 cut(s)	1081
SmiMI	CAYNNNNRTG	2 cut(s)	618, 889
SmlI	CTYRAG	4 cut(s)	205, 1081, 1827, 1855
SmoI	CTYRAG	4 cut(s)	205, 1081, 1827, 1855
SpeI	ACTAGT	2 cut(s)	1145, 1982
SseBI	AGGCCT	1 cut(s)	1411
SspI	AATATT	1 cut(s)	166
SspMI	CTAG	6 cut(s)	686, 989, 1146, 1787, 1947, 1983
StuI	AGGCCT	1 cut(s)	1411
StyD4I	CCNGG	2 cut(s)	589, 1273
StyI	CCWWGG	3 cut(s)	76, 375, 1189
TaaI	ACNGT	9 cut(s)	62, 194, 260, 860, 1139, 1181, 1247, 1703, 2004
TaiI	ACGT	1 cut(s)	1899
TaqI	TCGA	5 cut(s)	263, 906, 1082, 1197, 1371
TatI	WGTACW	1 cut(s)	1728
TauI	GCSGC	3 cut(s)	482, 972, 1536
TfiI	GAWTC	4 cut(s)	494, 777, 1194, 1766
Tru1I	TTAA	9 cut(s)	6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
Tru9I	TTAA	9 cut(s)	6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
TscAI	CASTG	2 cut(s)	968, 1144
TseFI	GTSAC	4 cut(s)	882, 1075, 1181, 1338
TseI	GCWGC	4 cut(s)	149, 152, 155, 1490
Tsp45I	GTSAC	4 cut(s)	882, 1075, 1181, 1338
TspGWI	ACGGA	1 cut(s)	1143
TspRI	CASTG	2 cut(s)	968, 1144
VpaK11BI	GGWCC	2 cut(s)	694, 1541
VspI	ATTAAT	1 cut(s)	1962
XapI	RAATTY	7 cut(s)	717, 815, 901, 1250, 1399, 1850, 1926
XbaI	TCTAGA	2 cut(s)	685, 1786
XceI	RCATGY	1 cut(s)	1735
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1966
XhoI	CTCGAG	1 cut(s)	1081
XmnI	GAANNNNTTC	1 cut(s)	894
XspI	CTAG	6 cut(s)	686, 989, 1146, 1787, 1947, 1983
Zsp2I	ATGCAT	1 cut(s)	1480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.