FvH4_3g15150

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
9411398 .. 9413113
1716 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15150.t1

Sequence Viewer

Length: 645 bp
ATGGCAGTGGTGTTCATACGATGCCGGCAGAAGTCTGGGGTCACCGGAAAAGAGTTGAAATATAAGGACGATGCGGATAAAAAATGGATCGGTCGTGGTGCACCATTGTTCATTGGGGACACGCTTAGGGCAAGGGAGGCTCTCAATTCCTCGAGCTTTATGGTCTCCGCTTCGGGAGAGTTCACGTTGGGTTTCTACTCCGATTACCTCACAGTAAGGTCTAACAACTACACGATCTGGGTTGCCAATCGGTTCTCACCGATTAACGACACTTCGTCGGCACTTCTCACGTTGGACAAGAACAAAACTGTCCTGAAAATAACGGACACAGGCAATATTCTCATCATGCTTTACTCCGCTCAGTCGTTTATTAGTACCAATGTCGTGGCTACCCTGACGGATTCTGGCAATTTAGTCCTACAAGACGTGGATCAGAATGTTTCAAACTCTCCTAAACAAATGAGGGTGCTGTGGCAAAGCATTGATGAACCTAATGTGGCTCTTATGCCGGAGATGAAATTAAAAAATAGTGGTGAGATATACTCTTGGCAGGAAAGTCGGAACACCCCGGGGGTAGGGTGTTTCAGCCTTGTATGGGATTCTGACCAGGGGCGTAGCTACGTTGGGTCGAGAGGGTTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

215

Amino Acids

23.81

Weight (kDa)

8.48

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 78 - 177 5.7e-17 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 359
AciI CCGC 3 cut(s) 74, 168, 357
AclWI GGATC 2 cut(s) 95, 438
AfaI GTAC 1 cut(s) 376
AfiI CCNNNNNNNGG 2 cut(s) 575, 595
AgsI TTSAA 3 cut(s) 58, 444, 640
AhdI GACNNNNNGTC 1 cut(s) 274
AjiI CACGTC 1 cut(s) 427
AjnI CCWGG 1 cut(s) 606
AluBI AGCT 2 cut(s) 156, 618
AluI AGCT 2 cut(s) 156, 618
Alw21I GWGCWC 1 cut(s) 103
Alw26I GTCTC 1 cut(s) 169
Alw44I GTGCAC 1 cut(s) 99
AlwI GGATC 2 cut(s) 95, 438
Ama87I CYCGRG 2 cut(s) 151, 568
ApaLI GTGCAC 1 cut(s) 99
AsuC2I CCSGG 2 cut(s) 569, 570
AsuHPI GGTGA 3 cut(s) 34, 249, 545
AvaI CYCGRG 2 cut(s) 151, 568
BaeGI GKGCMC 1 cut(s) 103
Bbv12I GWGCWC 1 cut(s) 103
BcgI CGANNNNNNTGC 2 cut(s) 539, 573
BciT130I CCWGG 1 cut(s) 608
BcnI CCSGG 2 cut(s) 569, 570
BcoDI GTCTC 1 cut(s) 169
Bme1390I CCNGG 3 cut(s) 569, 570, 608
BmeRI GACNNNNNGTC 1 cut(s) 274
BmeT110I CYCGRG 2 cut(s) 151, 568
BmgBI CACGTC 1 cut(s) 427
BmrFI CCNGG 3 cut(s) 569, 570, 608
BmsI GCATC 2 cut(s) 11, 61
BplI GAGNNNNNCTC 2 cut(s) 527, 559
Bpu10I CCTNAGC 1 cut(s) 125
BpuMI CCSGG 2 cut(s) 569, 570
BsaI GGTCTC 1 cut(s) 169
BsaJI CCNNGG 4 cut(s) 567, 568, 569, 607
BsaWI WCCGGW 1 cut(s) 44
Bsc4I CCNNNNNNNGG 2 cut(s) 575, 595
Bse118I RCCGGY 1 cut(s) 24
BseBI CCWGG 1 cut(s) 608
BseDI CCNNGG 4 cut(s) 567, 568, 569, 607
BseLI CCNNNNNNNGG 2 cut(s) 575, 595
BseMII CTCAG 1 cut(s) 374
BseSI GKGCMC 1 cut(s) 103
Bsh1285I CGRYCG 1 cut(s) 94
BsiEI CGRYCG 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 103
BsiHKCI CYCGRG 2 cut(s) 151, 568
BsiSI CCGG 4 cut(s) 25, 45, 509, 569
BslFI GGGAC 1 cut(s) 131
BslI CCNNNNNNNGG 2 cut(s) 575, 595
BsmAI GTCTC 1 cut(s) 169
BsmFI GGGAC 1 cut(s) 131
Bso31I GGTCTC 1 cut(s) 169
BsoBI CYCGRG 2 cut(s) 151, 568
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 3 cut(s) 87, 234, 430
BspACI CCGC 3 cut(s) 74, 168, 357
BspCNI CTCAG 1 cut(s) 373
BspPI GGATC 2 cut(s) 95, 438
BspTNI GGTCTC 1 cut(s) 169
BsrBI CCGCTC 1 cut(s) 359
BsrFI RCCGGY 1 cut(s) 24
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 4 cut(s) 567, 568, 569, 607
BssMI GATC 3 cut(s) 87, 234, 430
Bst2UI CCWGG 1 cut(s) 608
Bst4CI ACNGT 2 cut(s) 214, 310
BstC8I GCNNGC 1 cut(s) 26
BstDEI CTNAG 2 cut(s) 125, 360
BstEII GGTNACC 1 cut(s) 40
BstKTI GATC 3 cut(s) 90, 237, 433
BstMAI GTCTC 1 cut(s) 169
BstMBI GATC 3 cut(s) 87, 234, 430
BstMCI CGRYCG 1 cut(s) 94
BstMWI GCNNNNNNNGC 1 cut(s) 137
BstNI CCWGG 1 cut(s) 608
BstPI GGTNACC 1 cut(s) 40
BstSCI CCNGG 3 cut(s) 567, 568, 606
BstSLI GKGCMC 1 cut(s) 103
BstXI CCANNNNNNTGG 1 cut(s) 385
BtrI CACGTC 1 cut(s) 427
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 1 cut(s) 12
Cac8I GCNNGC 1 cut(s) 26
Cfr10I RCCGGY 1 cut(s) 24
Cfr9I CCCGGG 1 cut(s) 568
Csp6I GTAC 1 cut(s) 375
CviAII CATG 1 cut(s) 346
CviJI RGCY 6 cut(s) 140, 156, 389, 500, 588, 618
CviKI_1 RGCY 6 cut(s) 140, 156, 389, 500, 588, 618
CviQI GTAC 1 cut(s) 375
DdeI CTNAG 2 cut(s) 125, 360
DpnI GATC 3 cut(s) 89, 236, 432
DpnII GATC 3 cut(s) 87, 234, 430
DriI GACNNNNNGTC 1 cut(s) 274
Eam1105I GACNNNNNGTC 1 cut(s) 274
Eco31I GGTCTC 1 cut(s) 169
Eco88I CYCGRG 2 cut(s) 151, 568
Eco91I GGTNACC 1 cut(s) 40
EcoO65I GGTNACC 1 cut(s) 40
EcoRII CCWGG 1 cut(s) 606
FaeI CATG 1 cut(s) 349
FaiI YATR 7 cut(s) 17, 63, 161, 347, 506, 541, 595
FaqI GGGAC 1 cut(s) 131
FatI CATG 1 cut(s) 345
HapII CCGG 4 cut(s) 25, 45, 509, 569
Hin1II CATG 1 cut(s) 349
HinfI GANTC 2 cut(s) 401, 599
HpaII CCGG 4 cut(s) 25, 45, 509, 569
HphI GGTGA 3 cut(s) 34, 249, 545
Hpy166II GTNNAC 2 cut(s) 101, 183
Hpy188I TCNGA 4 cut(s) 202, 435, 561, 604
Hpy188III TCNNGA 3 cut(s) 174, 313, 630
Hpy8I GTNNAC 2 cut(s) 101, 183
Hpy99I CGWCG 1 cut(s) 280
HpyCH4III ACNGT 2 cut(s) 214, 310
HpyCH4IV ACGT 4 cut(s) 185, 290, 426, 621
HpyCH4V TGCA 1 cut(s) 101
HpyF10VI GCNNNNNNNGC 1 cut(s) 137
HpyF3I CTNAG 2 cut(s) 125, 360
HpySE526I ACGT 4 cut(s) 185, 290, 426, 621
Hsp92II CATG 1 cut(s) 349
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
Kzo9I GATC 3 cut(s) 87, 234, 430
LweI GCATC 2 cut(s) 11, 61
MaeII ACGT 4 cut(s) 185, 290, 426, 621
MaeIII GTNAC 1 cut(s) 40
MalI GATC 3 cut(s) 89, 236, 432
MbiI CCGCTC 1 cut(s) 359
MboI GATC 3 cut(s) 87, 234, 430
MfeI CAATTG 1 cut(s) 640
MhlI GDGCHC 1 cut(s) 103
MluCI AATT 4 cut(s) 145, 409, 518, 640
MmeI TCCRAC 2 cut(s) 273, 539
MnlI CCTC 5 cut(s) 130, 160, 218, 456, 626
MroNI GCCGGC 1 cut(s) 24
MseI TTAA 2 cut(s) 264, 521
MspI CCGG 4 cut(s) 25, 45, 509, 569
MspR9I CCNGG 3 cut(s) 569, 570, 608
MunI CAATTG 1 cut(s) 640
MvaI CCWGG 1 cut(s) 608
MwoI GCNNNNNNNGC 1 cut(s) 137
NaeI GCCGGC 1 cut(s) 26
NciI CCSGG 2 cut(s) 569, 570
NdeII GATC 3 cut(s) 87, 234, 430
NgoMIV GCCGGC 1 cut(s) 24
NlaIII CATG 1 cut(s) 349
NmuCI GTSAC 1 cut(s) 40
PaeR7I CTCGAG 1 cut(s) 151
PdiI GCCGGC 1 cut(s) 26
PfeI GAWTC 2 cut(s) 401, 599
Psp6I CCWGG 1 cut(s) 606
PspEI GGTNACC 1 cut(s) 40
PspGI CCWGG 1 cut(s) 606
PspXI VCTCGAGB 1 cut(s) 151
RsaI GTAC 1 cut(s) 376
RsaNI GTAC 1 cut(s) 375
SaqAI TTAA 2 cut(s) 264, 521
Sau3AI GATC 3 cut(s) 87, 234, 430
ScrFI CCNGG 3 cut(s) 569, 570, 608
SduI GDGCHC 1 cut(s) 103
SetI ASST 9 cut(s) 158, 188, 210, 221, 293, 429, 493, 620, 624
SfaNI GCATC 2 cut(s) 11, 61
Sfr274I CTCGAG 1 cut(s) 151
SlaI CTCGAG 1 cut(s) 151
SmaI CCCGGG 1 cut(s) 570
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
Sse9I AATT 4 cut(s) 145, 409, 518, 640
SsiI CCGC 3 cut(s) 74, 168, 357
SspI AATATT 1 cut(s) 337
StyD4I CCNGG 3 cut(s) 567, 568, 606
TaaI ACNGT 2 cut(s) 214, 310
TaiI ACGT 4 cut(s) 188, 293, 429, 624
TaqI TCGA 2 cut(s) 152, 629
TaqII GACCGA 1 cut(s) 80
TasI AATT 4 cut(s) 145, 409, 518, 640
TfiI GAWTC 2 cut(s) 401, 599
Tru1I TTAA 2 cut(s) 264, 521
Tru9I TTAA 2 cut(s) 264, 521
TscAI CASTG 1 cut(s) 12
TseFI GTSAC 1 cut(s) 40
Tsp45I GTSAC 1 cut(s) 40
TspDTI ATGAA 4 cut(s) 4, 100, 501, 530
TspGWI ACGGA 2 cut(s) 338, 413
TspMI CCCGGG 1 cut(s) 568
TspRI CASTG 1 cut(s) 12
VneI GTGCAC 1 cut(s) 99
XhoI CTCGAG 1 cut(s) 151
XmaI CCCGGG 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.