Rh5AG178900

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000096
Physical Location & Seq
Forward (+)
20158283 .. 20166767
8485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG178900.1

Sequence Viewer

Length: 1281 bp
ATGGAGGATCAATCCAATGAGACTGATGATCAAGAGATATCTACCCAGCCACATGGCAGTACAGATACTGCATTCATGGTACAAGGCTTCTGGACTTGTCATGGTGCAGCTGCACTGTTCATTGGAGACACGCTTAATCCAGGGGAGGCCCTCAATTCCTCGAGCTTTATGGTCTCCGCTTCGGGGGAGTTCACGTTGGGTTTCAACTCCGGCTACCTCATTCTGAGGTGCAAGAACTATACGGTTTGGGTTGCCAACCTGCACACTCCTATTTCAGACCCTTCGTCGGCGCTTCTCACCTTGGACAAGAACACAACTGTCCTGCAAATTACCCTGAAAGGCAAGAATCATATCGTTCTTTACTCCGCTTTTGATGATTATAGTACCAATAATGTTGTGGCTACCCTGTTAGATTCTGGCAATTTAGTCCTACGAGAGGTGAATCAGAACGTTTCAAACTCTCCGTTGTGGCAAAGCTTTGATGGTCCTAATGTGGCTCTTAGGCCGGGGATGAAATTAGGTTTTGATGATGGTCTAACCGGCAACACTATGTCGATTTGGAGTTGGCGGGAAAGTCAGAACAGCCCGGGGCCAGGGTCTTTCAGCCTTTATTGGGATTCAGGCCAATTGCAAGTTAGAAGAAACGGGGATCTTTGGTGGACCGGCGAATATTACAAGATGACTGATTTCATCACGGAATCAAAGGTCTACAATTTTAGCGTGGTTTCATATGAGAATGGAGACTACTTCAGTTACACAGTCGTTGGTAATCCAAATAGCAGATCCGCCTGGGTGCTAGACACAGGCGGGAAGCTTTATGATGTTTACTATAACATTTCTATTGCGTCACCAGGTGACTGTGATGGCTATAACACCGATGGCTATAACACCGATGGCTATATCCCCGATAGTGGTGGGACGTGCCAGAGATGGAGTGGCCGGGCCACTCTTTATTGTCCTGTGGCAACATCCTATGGTGCATATATTCAGCAGATAGAAGGGCGCTCCTTTAGACCAATCAGTATGAACATGTCTAGCAATTCAACCTGGGAGGAGACAAATTCAAGTCGATATGGGATTGATGAATGTATGGCTACTTGTTGGATGGACTGTGACTGCCTTGGCTTCGAATTTCTCTTTGATAATCAGACTGGATGTCGATTTTGGAGTGTAAAGTATTCTCAGGTCCTTGAAGATCCGGATAGTTCTGAAACTAAATATATTATAACAGGACTAGCCCCTACGTATAAACCGCAATCTCGAAGAAACATAATTGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr

Protein Analysis

426

Amino Acids

47.42

Weight (kDa)

4.45

Isoelectric Point (pI)

42.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 81 - 190 2.1e-20 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1226
Acc36I ACCTGC 1 cut(s) 267
AccI GTMKAC 1 cut(s) 708
AccIII TCCGGA 1 cut(s) 1198
AciI CCGC 6 cut(s) 177, 366, 568, 786, 807, 1253
AclI AACGTT 1 cut(s) 450
AclWI GGATC 4 cut(s) 15, 657, 777, 1190
AcoI YGGCCR 1 cut(s) 937
AcsI RAATTY 2 cut(s) 1060, 1130
AcuI CTGAAG 1 cut(s) 733
AdeI CACNNNGTG 1 cut(s) 854
AfaI GTAC 3 cut(s) 61, 81, 385
AfiI CCNNNNNNNGG 6 cut(s) 183, 286, 436, 593, 613, 911
AflIII ACRYGT 1 cut(s) 1029
AgsI TTSAA 5 cut(s) 205, 456, 1044, 1065, 1193
AhdI GACNNNNNGTC 2 cut(s) 283, 1155
AjiI CACGTC 1 cut(s) 921
AjnI CCWGG 5 cut(s) 139, 592, 788, 850, 1046
AluBI AGCT 4 cut(s) 110, 165, 477, 814
AluI AGCT 4 cut(s) 110, 165, 477, 814
Alw26I GTCTC 5 cut(s) 14, 120, 178, 735, 1049
AlwI GGATC 4 cut(s) 15, 657, 777, 1190
AlwNI CAGNNNCTG 1 cut(s) 68
Ama87I CYCGRG 2 cut(s) 160, 586
Aor13HI TCCGGA 1 cut(s) 1198
AoxI GGCC 6 cut(s) 147, 503, 590, 622, 937, 942
ApeKI GCWGC 2 cut(s) 107, 110
ApoI RAATTY 2 cut(s) 1060, 1130
AspLEI GCGC 2 cut(s) 292, 1005
AspS9I GGNCC 6 cut(s) 148, 485, 590, 660, 942, 1186
AsuC2I CCSGG 4 cut(s) 507, 587, 588, 941
AsuHPI GGTGA 4 cut(s) 289, 451, 840, 866
AsuII TTCGAA 1 cut(s) 1128
AvaI CYCGRG 2 cut(s) 160, 586
AvaII GGWCC 3 cut(s) 485, 660, 1186
BbvI GCAGC 2 cut(s) 97, 119
BccI CCATC 7 cut(s) 476, 524, 857, 872, 887, 924, 1099
BciT130I CCWGG 5 cut(s) 141, 594, 790, 852, 1048
BclI TGATCA 1 cut(s) 28
BcnI CCSGG 4 cut(s) 507, 587, 588, 941
BcoDI GTCTC 5 cut(s) 14, 120, 178, 735, 1049
BfaI CTAG 3 cut(s) 797, 1035, 1235
BfoI RGCGCY 2 cut(s) 293, 1006
BfuAI ACCTGC 1 cut(s) 267
BisI GCNGC 2 cut(s) 108, 111
BlsI GCNGC 2 cut(s) 109, 112
Bme1390I CCNGG 9 cut(s) 141, 507, 587, 588, 594, 790, 852, 941, 1048
Bme18I GGWCC 3 cut(s) 485, 660, 1186
BmeRI GACNNNNNGTC 2 cut(s) 283, 1155
BmeT110I CYCGRG 2 cut(s) 160, 586
BmgBI CACGTC 1 cut(s) 921
BmgT120I GGNCC 6 cut(s) 148, 485, 590, 660, 942, 1186
BmiI GGNNCC 1 cut(s) 591
BmrFI CCNGG 9 cut(s) 141, 507, 587, 588, 594, 790, 852, 941, 1048
Bpu14I TTCGAA 1 cut(s) 1128
BpuMI CCSGG 4 cut(s) 507, 587, 588, 941
BsaAI YACGTR 1 cut(s) 1245
BsaI GGTCTC 1 cut(s) 178
BsaJI CCNNGG 9 cut(s) 140, 300, 506, 586, 587, 593, 789, 1047, 1120
BsaWI WCCGGW 1 cut(s) 1198
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 6 cut(s) 183, 286, 436, 593, 613, 911
Bse118I RCCGGY 2 cut(s) 539, 662
Bse1I ACTGG 1 cut(s) 1156
BseAI TCCGGA 1 cut(s) 1198
BseBI CCWGG 5 cut(s) 141, 594, 790, 852, 1048
BseDI CCNNGG 9 cut(s) 140, 300, 506, 586, 587, 593, 789, 1047, 1120
BseGI GGATG 4 cut(s) 516, 968, 1110, 1160
BseLI CCNNNNNNNGG 6 cut(s) 183, 286, 436, 593, 613, 911
BseMII CTCAG 2 cut(s) 215, 1196
BseNI ACTGG 1 cut(s) 1156
BseRI GAGGAG 1 cut(s) 1067
BseXI GCAGC 2 cut(s) 97, 119
BseYI CCCAGC 1 cut(s) 45
BsgI GTGCAG 3 cut(s) 96, 126, 245
BshFI GGCC 6 cut(s) 149, 505, 592, 624, 939, 944
BsiHKCI CYCGRG 2 cut(s) 160, 586
BsiSI CCGG 7 cut(s) 210, 506, 540, 587, 663, 940, 1199
BslFI GGGAC 1 cut(s) 931
BslI CCNNNNNNNGG 6 cut(s) 183, 286, 436, 593, 613, 911
BsmAI GTCTC 5 cut(s) 14, 120, 178, 735, 1049
BsmFI GGGAC 1 cut(s) 931
BsmI GAATGC 1 cut(s) 71
BsnI GGCC 6 cut(s) 149, 505, 592, 624, 939, 944
Bso31I GGTCTC 1 cut(s) 178
BsoBI CYCGRG 2 cut(s) 160, 586
Bsp119I TTCGAA 1 cut(s) 1128
Bsp13I TCCGGA 1 cut(s) 1198
Bsp143I GATC 5 cut(s) 7, 28, 649, 782, 1195
BspACI CCGC 6 cut(s) 177, 366, 568, 786, 807, 1253
BspANI GGCC 6 cut(s) 149, 505, 592, 624, 939, 944
BspCNI CTCAG 2 cut(s) 216, 1195
BspEI TCCGGA 1 cut(s) 1198
BspLI GGNNCC 1 cut(s) 591
BspMI ACCTGC 1 cut(s) 267
BspPI GGATC 4 cut(s) 15, 657, 777, 1190
BspT104I TTCGAA 1 cut(s) 1128
BspTNI GGTCTC 1 cut(s) 178
BsrFI RCCGGY 2 cut(s) 539, 662
BsrI ACTGG 1 cut(s) 1156
BssAI RCCGGY 2 cut(s) 539, 662
BssECI CCNNGG 9 cut(s) 140, 300, 506, 586, 587, 593, 789, 1047, 1120
BssMI GATC 5 cut(s) 7, 28, 649, 782, 1195
BssT1I CCWWGG 2 cut(s) 300, 1120
Bst2UI CCWGG 5 cut(s) 141, 594, 790, 852, 1048
Bst4CI ACNGT 6 cut(s) 117, 244, 319, 760, 860, 1112
BstBAI YACGTR 1 cut(s) 1245
BstBI TTCGAA 1 cut(s) 1128
BstDEI CTNAG 3 cut(s) 224, 500, 1182
BstENI CCTNNNNNAGG 1 cut(s) 434
BstF5I GGATG 4 cut(s) 516, 968, 1110, 1160
BstH2I RGCGCY 2 cut(s) 293, 1006
BstHHI GCGC 2 cut(s) 292, 1005
BstKTI GATC 5 cut(s) 10, 31, 652, 785, 1198
BstMAI GTCTC 5 cut(s) 14, 120, 178, 735, 1049
BstMBI GATC 5 cut(s) 7, 28, 649, 782, 1195
BstNI CCWGG 5 cut(s) 141, 594, 790, 852, 1048
BstNSI RCATGY 1 cut(s) 1033
BstSCI CCNGG 9 cut(s) 139, 505, 585, 586, 592, 788, 850, 939, 1046
BstSNI TACGTA 1 cut(s) 1245
BstV1I GCAGC 2 cut(s) 97, 119
BstX2I RGATCY 3 cut(s) 649, 782, 1195
BstXI CCANNNNNNTGG 1 cut(s) 53
BstYI RGATCY 3 cut(s) 649, 782, 1195
BsuRI GGCC 6 cut(s) 149, 505, 592, 624, 939, 944
BtrI CACGTC 1 cut(s) 921
BtsCI GGATG 4 cut(s) 516, 968, 1110, 1160
BtsIMutI CAGTG 1 cut(s) 113
BveI ACCTGC 1 cut(s) 267
CaiI CAGNNNCTG 1 cut(s) 68
CfoI GCGC 2 cut(s) 292, 1005
Cfr10I RCCGGY 2 cut(s) 539, 662
Cfr13I GGNCC 6 cut(s) 148, 485, 590, 660, 942, 1186
Cfr9I CCCGGG 1 cut(s) 586
CseI GACGC 1 cut(s) 834
CsiI ACCWGGT 1 cut(s) 850
Csp6I GTAC 3 cut(s) 60, 80, 384
CviAII CATG 4 cut(s) 53, 76, 101, 1030
CviQI GTAC 3 cut(s) 60, 80, 384
DdeI CTNAG 3 cut(s) 224, 500, 1182
DpnI GATC 5 cut(s) 9, 30, 651, 784, 1197
DpnII GATC 5 cut(s) 7, 28, 649, 782, 1195
DraIII CACNNNGTG 1 cut(s) 854
DriI GACNNNNNGTC 2 cut(s) 283, 1155
EaeI YGGCCR 1 cut(s) 937
Eam1105I GACNNNNNGTC 2 cut(s) 283, 1155
EciI GGCGGA 1 cut(s) 775
Eco105I TACGTA 1 cut(s) 1245
Eco130I CCWWGG 2 cut(s) 300, 1120
Eco31I GGTCTC 1 cut(s) 178
Eco32I GATATC 1 cut(s) 39
Eco47I GGWCC 3 cut(s) 485, 660, 1186
Eco57I CTGAAG 1 cut(s) 733
Eco88I CYCGRG 2 cut(s) 160, 586
EcoNI CCTNNNNNAGG 1 cut(s) 434
EcoO109I RGGNCCY 2 cut(s) 148, 1186
EcoRII CCWGG 5 cut(s) 139, 592, 788, 850, 1046
EcoRV GATATC 1 cut(s) 39
EcoT14I CCWWGG 2 cut(s) 300, 1120
ErhI CCWWGG 2 cut(s) 300, 1120
FaeI CATG 4 cut(s) 56, 79, 104, 1033
FaqI GGGAC 1 cut(s) 931
FatI CATG 4 cut(s) 52, 75, 100, 1029
FauI CCCGC 2 cut(s) 561, 800
FauNDI CATATG 1 cut(s) 730
FbaI TGATCA 1 cut(s) 28
FblI GTMKAC 1 cut(s) 708
Fnu4HI GCNGC 2 cut(s) 108, 111
FokI GGATG 4 cut(s) 523, 955, 1117, 1167
Fsp4HI GCNGC 2 cut(s) 108, 111
FspBI CTAG 3 cut(s) 797, 1035, 1235
GlaI GCGC 2 cut(s) 291, 1004
GluI GCNGC 2 cut(s) 108, 111
GsaI CCCAGC 1 cut(s) 49
HaeII RGCGCY 2 cut(s) 293, 1006
HaeIII GGCC 6 cut(s) 149, 505, 592, 624, 939, 944
HapII CCGG 7 cut(s) 210, 506, 540, 587, 663, 940, 1199
HgaI GACGC 1 cut(s) 834
HhaI GCGC 2 cut(s) 292, 1005
Hin1II CATG 4 cut(s) 56, 79, 104, 1033
Hin6I GCGC 2 cut(s) 290, 1003
HinP1I GCGC 2 cut(s) 290, 1003
HindIII AAGCTT 2 cut(s) 475, 812
HinfI GANTC 5 cut(s) 346, 413, 442, 617, 698
HpaII CCGG 7 cut(s) 210, 506, 540, 587, 663, 940, 1199
HphI GGTGA 4 cut(s) 289, 451, 840, 866
Hpy166II GTNNAC 4 cut(s) 192, 660, 709, 826
Hpy188I TCNGA 6 cut(s) 225, 277, 447, 579, 1149, 1210
Hpy188III TCNNGA 4 cut(s) 32, 91, 1199, 1260
Hpy8I GTNNAC 4 cut(s) 192, 660, 709, 826
Hpy99I CGWCG 1 cut(s) 289
HpyAV CCTTC 2 cut(s) 291, 992
HpyCH4III ACNGT 6 cut(s) 117, 244, 319, 760, 860, 1112
HpyCH4IV ACGT 4 cut(s) 194, 450, 920, 1244
HpyCH4V TGCA 8 cut(s) 71, 107, 113, 231, 262, 325, 631, 980
HpyF3I CTNAG 3 cut(s) 224, 500, 1182
HpySE526I ACGT 4 cut(s) 194, 450, 920, 1244
Hsp92II CATG 4 cut(s) 56, 79, 104, 1033
HspAI GCGC 2 cut(s) 290, 1003
Kpn2I TCCGGA 1 cut(s) 1198
Ksp22I TGATCA 1 cut(s) 28
Kzo9I GATC 5 cut(s) 7, 28, 649, 782, 1195
LmnI GCTCC 1 cut(s) 1010
Lsp1109I GCAGC 2 cut(s) 97, 119
MabI ACCWGGT 1 cut(s) 850
MaeI CTAG 3 cut(s) 797, 1035, 1235
MaeII ACGT 4 cut(s) 194, 450, 920, 1244
MaeIII GTNAC 4 cut(s) 752, 846, 854, 1112
MalI GATC 5 cut(s) 9, 30, 651, 784, 1197
MboI GATC 5 cut(s) 7, 28, 649, 782, 1195
MboII GAAGA 3 cut(s) 651, 1205, 1275
MfeI CAATTG 1 cut(s) 626
MflI RGATCY 3 cut(s) 649, 782, 1195
MmeI TCCRAC 1 cut(s) 1082
MnlI CCTC 7 cut(s) 139, 161, 169, 219, 227, 430, 1045
MroI TCCGGA 1 cut(s) 1198
MseI TTAA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 7 cut(s) 210, 506, 540, 587, 663, 940, 1199
MspR9I CCNGG 9 cut(s) 141, 507, 587, 588, 594, 790, 852, 941, 1048
MunI CAATTG 1 cut(s) 626
Mva1269I GAATGC 1 cut(s) 71
MvaI CCWGG 5 cut(s) 141, 594, 790, 852, 1048
NciI CCSGG 4 cut(s) 507, 587, 588, 941
NdeI CATATG 1 cut(s) 730
NdeII GATC 5 cut(s) 7, 28, 649, 782, 1195
NlaIII CATG 4 cut(s) 56, 79, 104, 1033
NlaIV GGNNCC 1 cut(s) 591
NmuCI GTSAC 3 cut(s) 846, 854, 1112
NspI RCATGY 1 cut(s) 1033
NspV TTCGAA 1 cut(s) 1128
PaeR7I CTCGAG 1 cut(s) 160
PciI ACATGT 1 cut(s) 1029
PctI GAATGC 1 cut(s) 71
PfeI GAWTC 5 cut(s) 346, 413, 442, 617, 698
PkrI GCNGC 2 cut(s) 109, 112
Ppu21I YACGTR 1 cut(s) 1245
PpuMI RGGWCCY 1 cut(s) 1186
PscI ACATGT 1 cut(s) 1029
PsiI TTATAA 1 cut(s) 1226
Psp1406I AACGTT 1 cut(s) 450
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 5 cut(s) 139, 592, 788, 850, 1046
PspFI CCCAGC 1 cut(s) 45
PspGI CCWGG 5 cut(s) 139, 592, 788, 850, 1046
PspN4I GGNNCC 1 cut(s) 591
PspPI GGNCC 6 cut(s) 148, 485, 590, 660, 942, 1186
PspPPI RGGWCCY 1 cut(s) 1186
PspXI VCTCGAGB 1 cut(s) 160
PstNI CAGNNNCTG 1 cut(s) 68
PsuI RGATCY 3 cut(s) 649, 782, 1195
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 3 cut(s) 61, 81, 385
RsaNI GTAC 3 cut(s) 60, 80, 384
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 2 cut(s) 108, 111
Sau3AI GATC 5 cut(s) 7, 28, 649, 782, 1195
Sau96I GGNCC 6 cut(s) 148, 485, 590, 660, 942, 1186
ScrFI CCNGG 9 cut(s) 141, 507, 587, 588, 594, 790, 852, 941, 1048
SexAI ACCWGGT 1 cut(s) 850
Sfr274I CTCGAG 1 cut(s) 160
SfuI TTCGAA 1 cut(s) 1128
SinI GGWCC 3 cut(s) 485, 660, 1186
SlaI CTCGAG 1 cut(s) 160
SmaI CCCGGG 1 cut(s) 588
SmlI CTYRAG 1 cut(s) 160
SmoI CTYRAG 1 cut(s) 160
SnaBI TACGTA 1 cut(s) 1245
SsiI CCGC 6 cut(s) 177, 366, 568, 786, 807, 1253
SspI AATATT 1 cut(s) 671
SspMI CTAG 3 cut(s) 797, 1035, 1235
StyD4I CCNGG 9 cut(s) 139, 505, 585, 586, 592, 788, 850, 939, 1046
StyI CCWWGG 2 cut(s) 300, 1120
TaaI ACNGT 6 cut(s) 117, 244, 319, 760, 860, 1112
TaiI ACGT 4 cut(s) 197, 453, 923, 1247
TaqI TCGA 6 cut(s) 161, 554, 1069, 1128, 1159, 1261
TatI WGTACW 1 cut(s) 59
TfiI GAWTC 5 cut(s) 346, 413, 442, 617, 698
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TscAI CASTG 1 cut(s) 120
TseFI GTSAC 3 cut(s) 846, 854, 1112
TseI GCWGC 2 cut(s) 107, 110
Tsp45I GTSAC 3 cut(s) 846, 854, 1112
TspDTI ATGAA 7 cut(s) 64, 109, 527, 679, 717, 1040, 1098
TspGWI ACGGA 2 cut(s) 453, 710
TspMI CCCGGG 1 cut(s) 586
TspRI CASTG 1 cut(s) 120
VpaK11BI GGWCC 3 cut(s) 485, 660, 1186
XagI CCTNNNNNAGG 1 cut(s) 434
XapI RAATTY 2 cut(s) 1060, 1130
XceI RCATGY 1 cut(s) 1033
XcmI CCANNNNNNNNNTGG 2 cut(s) 394, 932
XhoI CTCGAG 1 cut(s) 160
XmaI CCCGGG 1 cut(s) 586
XmiI GTMKAC 1 cut(s) 708
XspI CTAG 3 cut(s) 797, 1035, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.