Rroxscaffold_1G00054550

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000096
Physical Location & Seq
Reverse (-)
75929997 .. 75933143
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00054550.1

Sequence Viewer

Length: 2010 bp
ATGCTTGCATTATGTGTGACATTATGGATCATCTCTATTATTTCTAGTCATGTGCCAAAAGCCAAAAGGCAAAACCTCCCAAAATCTGAAGGTTTTTGCTTCTTGCTTAATGGGACTGCTCGGTACCAACCAGAGACTCAGAAAGATGGTGATCCGGTGGTGCTTTACTCAGCTTCAGAGACCGCCAATAGCAGTGTGTTAGCTACCCTTTTGGATTCTGGCAACTTTGTCCTAGAAGAGGTGAGCTCTGATGGATCAGTGAAAAGGGTTTTGTGGCAAAGTTTTGATTATCCAGGAGATGTGCTTCTGCCAGGTATGAAATTAGGGATTAATCATAGTAATGGCCACAACTGGTCACTTTCATCGTGGTTTACTGAGAAAAGTGCAATGCCAGGATCTTTCACACTTGATTGGGACCCTGAGGGACATGAATTGAAAATTAGGCGACGAGGGGTAGTTTATTGGAGTAGTGGAGTCTTTAGAGATGGGAGTTTTGAAAATATTAAGCAGAAGAGGTATACTTTTAGCATTGTTTCAAATCAGAATGAAGATTATTTCAGTTACTCTGTTGTAGATCAAAATGCTAAACCACAATGGCTCCTAACCACAATAGGGAGACTATATGACTTTGATGGATCACTGGATATTGCAACAGCGGATTCCTGTTATGGGTATAACACTGACGGAGGATGCCAGATTTGGGACCAACCAACTGAGTGCAGGCATTTTGGTGATGTATTTGAGCAAGGAAATGGGTACTTTAATCCGACAGGTCCTAGTGGTTCAAATGTAAAATCTACCAGTGATTCAAACACAAGTCTAAGCATAACTGATTGTAAGGCTGCTTGTTGGGAAAATTGTGACTGTCAAGGGTTCATGTTTCTGTTTGCTAATCAGACTGGATGTCGATTTTGGACTGGAAACTTGAAGTTCATTGGAGACAGCGCAGGCTATAGTTCAAGTGTTGTTTATTTTTTAACAAAAATCTCAGCCAGCAGCCGCTCACATAAGTGGATATGGATTGGTGTTGCTACTGTCACTGCTCTATTGGAGGGAGAAAAAAAAAAGATTGATGAGAAAAAATTGCTTCCCTTAAGGGGATCTGATATATCAACTGATGTCCATGGGATTCAAAATGATGGATCCATGGGACATGATTTAAGAGCATTTAGCTATGAATCTGTCATGACTGCTACAGACTACTTCTCCTTACAAAACAAGCTAGGAGAAGGGGGCTTTGGACCTGTTTATAAGGGAAAATTGTTGTCAGGGCGAGAAGTAGCTGTAAAGAGGCTTTCAAGTTGTTCGGGGCAAGGAGAAGTACAGTTTAAGAATGAATTGATTCTCATATCTGAACTCCAACATACTAATCTTGTTCAGCTTTTCGGATTTTGCATTCATGGTGAAGAGAGGATGCTAATTTACGAGTATATGCCAAACAAAGATCTGGACTACATATTATTTGATTCAACCAGACGCATGCTACTGGATTGGAAGAAACGTTTCAATATAATTGAAGGAATCGCCCAAGGATTGCTTTACTTGCACAATGGTTACATGTCTCCTGAGTATGCTATGCAGGGAATTTTTTCTGGAAAATCTGATGTATTCAGTTTTGGAGTGTTGATGCTCGAAATCATAAGTGGTAGGAAAAACAACAGGTTTCACAGTGCTCATCGCTCGCTCAATTTAGTAGGATATGCGTGGGAATTATGGCAAGAAGGTGCAGGACTAGAACTGATGGACACAACACTAAGTGATTCGTGTGTGGAAAATCAATTTTTAAGATGCACCCATGTTGGTCTACTAAGTGTCGAAGAAGATGCAGAACTTCGGCCTACCATGTCAGATGCCATATCTATGTTGACAAATGAAAGCTTGCCTTTACCTATACCAATAAGACCAGTATATTTTCCAGTAAGGCATTCGGCTGGAGTTGACATAAGAGGAAACAAATCCGAAATTATATCAGCAAATGGCCTGTCCAGCTCCCTTGTTATAGGACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

669

Amino Acids

74.63

Weight (kDa)

5.6

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 55 - 123 3.5e-18 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 403 - 517 3.4e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 403 - 517 4.3e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 519 - 552 3.3e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1251
Acc65I GGTACC 1 cut(s) 123
AccB1I GGYRCC 1 cut(s) 123
AccBSI CCGCTC 1 cut(s) 1002
AccI GTMKAC 2 cut(s) 518, 1804
AciI CCGC 3 cut(s) 183, 656, 1000
AclI AACGTT 1 cut(s) 1501
AclWI GGATC 8 cut(s) 35, 146, 262, 403, 643, 1108, 1137, 1150
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 1 cut(s) 1584
AcuI CTGAAG 2 cut(s) 108, 159
AdeI CACNNNGTG 1 cut(s) 1757
AfaI GTAC 3 cut(s) 125, 758, 1323
AfiI CCNNNNNNNGG 5 cut(s) 238, 612, 669, 700, 1097
AflII CTTAAG 1 cut(s) 1093
AflIII ACRYGT 1 cut(s) 1557
AhdI GACNNNNNGTC 1 cut(s) 903
AjnI CCWGG 3 cut(s) 292, 310, 391
AjuI GAANNNNNNNTTGG 2 cut(s) 1221, 1253
AleI CACNNNNGTG 1 cut(s) 1009
AluBI AGCT 9 cut(s) 173, 203, 246, 1173, 1222, 1283, 1381, 1878, 1989
AluI AGCT 9 cut(s) 173, 203, 246, 1173, 1222, 1283, 1381, 1878, 1989
Alw21I GWGCWC 2 cut(s) 248, 1675
Alw26I GTCTC 5 cut(s) 128, 173, 610, 933, 1566
AlwI GGATC 8 cut(s) 35, 146, 262, 403, 643, 1108, 1137, 1150
AoxI GGCC 3 cut(s) 343, 1835, 1978
ApeKI GCWGC 2 cut(s) 842, 996
ApoI RAATTY 1 cut(s) 1584
ArsI GACNNNNNNTTYG 2 cut(s) 1967, 1999
AseI ATTAAT 1 cut(s) 330
Asp700I GAANNNNTTC 3 cut(s) 1341, 1502, 1588
Asp718I GGTACC 1 cut(s) 123
AspLEI GCGC 1 cut(s) 947
AspS9I GGNCC 4 cut(s) 415, 703, 773, 1241
AsuHPI GGTGA 4 cut(s) 161, 253, 743, 1415
AvaII GGWCC 4 cut(s) 415, 703, 773, 1241
AxyI CCTNAGG 1 cut(s) 420
BalI TGGCCA 1 cut(s) 345
BamHI GGATCC 1 cut(s) 1142
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 1 cut(s) 248
Bbv12I GWGCWC 2 cut(s) 248, 1675
BbvI GCAGC 2 cut(s) 829, 1008
BccI CCATC 6 cut(s) 140, 245, 479, 626, 1133, 1735
BcgI CGANNNNNNTGC 2 cut(s) 1805, 1839
BciT130I CCWGG 3 cut(s) 294, 312, 393
BcoDI GTCTC 5 cut(s) 128, 173, 610, 933, 1566
BfaI CTAG 5 cut(s) 45, 233, 777, 1223, 1733
BfmI CTRYAG 2 cut(s) 952, 1194
BfrI CTTAAG 1 cut(s) 1093
BglII AGATCT 1 cut(s) 1444
BisI GCNGC 3 cut(s) 843, 997, 1000
BlsI GCNGC 3 cut(s) 844, 998, 1001
Bme1390I CCNGG 3 cut(s) 294, 312, 393
Bme18I GGWCC 4 cut(s) 415, 703, 773, 1241
BmeRI GACNNNNNGTC 1 cut(s) 903
BmgT120I GGNCC 4 cut(s) 415, 703, 773, 1241
BmiI GGNNCC 6 cut(s) 125, 416, 417, 599, 704, 1144
BmrFI CCNGG 3 cut(s) 294, 312, 393
BmsI GCATC 6 cut(s) 680, 1404, 1617, 1778, 1813, 1840
BplI GAGNNNNNCTC 2 cut(s) 230, 262
BpmI CTGGAG 1 cut(s) 1953
BsaBI GATNNNNATC 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 173
BsaJI CCNNGG 3 cut(s) 1123, 1146, 1528
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 4 cut(s) 582, 612, 1190, 1220
Bsc4I CCNNNNNNNGG 5 cut(s) 238, 612, 669, 700, 1097
Bse1I ACTGG 8 cut(s) 356, 645, 801, 904, 922, 1491, 1904, 1916
Bse21I CCTNAGG 1 cut(s) 420
Bse3DI GCAATG 1 cut(s) 393
Bse8I GATNNNNATC 1 cut(s) 150
BseBI CCWGG 3 cut(s) 294, 312, 393
BseDI CCNNGG 3 cut(s) 1123, 1146, 1528
BseGI GGATG 3 cut(s) 695, 908, 1419
BseJI GATNNNNATC 1 cut(s) 150
BseLI CCNNNNNNNGG 5 cut(s) 238, 612, 669, 700, 1097
BseMI GCAATG 1 cut(s) 393
BseMII CTCAG 7 cut(s) 152, 183, 366, 411, 705, 1002, 1557
BseNI ACTGG 8 cut(s) 356, 645, 801, 904, 922, 1491, 1904, 1916
BseXI GCAGC 2 cut(s) 829, 1008
BsgI GTGCAG 2 cut(s) 739, 1746
BshFI GGCC 3 cut(s) 345, 1837, 1980
BshNI GGYRCC 1 cut(s) 123
BsiHKAI GWGCWC 2 cut(s) 248, 1675
BsiSI CCGG 1 cut(s) 155
BslFI GGGAC 5 cut(s) 127, 428, 438, 716, 1164
BslI CCNNNNNNNGG 5 cut(s) 238, 612, 669, 700, 1097
BsmAI GTCTC 5 cut(s) 128, 173, 610, 933, 1566
BsmFI GGGAC 5 cut(s) 127, 428, 438, 716, 1164
BsmI GAATGC 2 cut(s) 1395, 1924
BsnI GGCC 3 cut(s) 345, 1837, 1980
Bso31I GGTCTC 1 cut(s) 173
Bsp1286I GDGCHC 2 cut(s) 248, 1675
Bsp143I GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
Bsp19I CCATGG 2 cut(s) 1123, 1146
BspACI CCGC 3 cut(s) 183, 656, 1000
BspANI GGCC 3 cut(s) 345, 1837, 1980
BspCNI CTCAG 7 cut(s) 151, 182, 367, 412, 706, 1001, 1558
BspHI TCATGA 1 cut(s) 1185
BspLI GGNNCC 6 cut(s) 125, 416, 417, 599, 704, 1144
BspPI GGATC 8 cut(s) 35, 146, 262, 403, 643, 1108, 1137, 1150
BspT107I GGYRCC 1 cut(s) 123
BspTI CTTAAG 1 cut(s) 1093
BspTNI GGTCTC 1 cut(s) 173
BsrBI CCGCTC 1 cut(s) 1002
BsrDI GCAATG 1 cut(s) 393
BsrI ACTGG 8 cut(s) 356, 645, 801, 904, 922, 1491, 1904, 1916
BssECI CCNNGG 3 cut(s) 1123, 1146, 1528
BssMI GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
BssNAI GTATAC 1 cut(s) 519
BssT1I CCWWGG 3 cut(s) 1123, 1146, 1528
Bst1107I GTATAC 1 cut(s) 519
Bst2UI CCWGG 3 cut(s) 294, 312, 393
Bst4CI ACNGT 4 cut(s) 866, 1036, 1326, 1670
Bst6I CTCTTC 3 cut(s) 231, 506, 1401
BstAFI CTTAAG 1 cut(s) 1093
BstC8I GCNNGC 7 cut(s) 6, 722, 949, 994, 1481, 1682, 1880
BstDSI CCRYGG 2 cut(s) 1123, 1146
BstENI CCTNNNNNAGG 1 cut(s) 236
BstF5I GGATG 3 cut(s) 695, 908, 1419
BstHHI GCGC 1 cut(s) 947
BstKTI GATC 9 cut(s) 30, 154, 257, 398, 577, 638, 1103, 1145, 1447
BstMAI GTCTC 5 cut(s) 128, 173, 610, 933, 1566
BstMBI GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
BstMWI GCNNNNNNNGC 2 cut(s) 1543, 1986
BstNI CCWGG 3 cut(s) 294, 312, 393
BstNSI RCATGY 2 cut(s) 1483, 1561
BstSCI CCNGG 3 cut(s) 292, 310, 391
BstSFI CTRYAG 2 cut(s) 952, 1194
BstV1I GCAGC 2 cut(s) 829, 1008
BstX2I RGATCY 4 cut(s) 395, 1100, 1142, 1444
BstYI RGATCY 4 cut(s) 395, 1100, 1142, 1444
BstZ17I GTATAC 1 cut(s) 519
Bsu36I CCTNAGG 1 cut(s) 420
BsuRI GGCC 3 cut(s) 345, 1837, 1980
BtgI CCRYGG 2 cut(s) 1123, 1146
BtgZI GCGATG 1 cut(s) 1661
BtsCI GGATG 3 cut(s) 695, 908, 1419
BtsI GCAGTG 2 cut(s) 199, 1038
BtsIMutI CAGTG 7 cut(s) 199, 264, 638, 678, 808, 1038, 1675
Cac8I GCNNGC 7 cut(s) 6, 722, 949, 994, 1481, 1682, 1880
CciI TCATGA 1 cut(s) 1185
CfoI GCGC 1 cut(s) 947
Cfr13I GGNCC 4 cut(s) 415, 703, 773, 1241
CseI GACGC 1 cut(s) 1485
Csp6I GTAC 3 cut(s) 124, 757, 1322
CviQI GTAC 3 cut(s) 124, 757, 1322
DpnI GATC 9 cut(s) 29, 153, 256, 397, 576, 637, 1102, 1144, 1446
DpnII GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
DraIII CACNNNGTG 1 cut(s) 1757
DriI GACNNNNNGTC 1 cut(s) 903
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 3 cut(s) 231, 506, 1401
Eam1105I GACNNNNNGTC 1 cut(s) 903
EarI CTCTTC 3 cut(s) 231, 506, 1401
Ecl136II GAGCTC 1 cut(s) 246
Eco130I CCWWGG 3 cut(s) 1123, 1146, 1528
Eco24I GRGCYC 1 cut(s) 248
Eco31I GGTCTC 1 cut(s) 173
Eco47I GGWCC 4 cut(s) 415, 703, 773, 1241
Eco53kI GAGCTC 1 cut(s) 246
Eco57I CTGAAG 2 cut(s) 108, 159
Eco81I CCTNAGG 1 cut(s) 420
EcoICRI GAGCTC 1 cut(s) 246
EcoNI CCTNNNNNAGG 1 cut(s) 236
EcoO109I RGGNCCY 2 cut(s) 415, 773
EcoRII CCWGG 3 cut(s) 292, 310, 391
EcoT14I CCWWGG 3 cut(s) 1123, 1146, 1528
EcoT38I GRGCYC 1 cut(s) 248
ErhI CCWWGG 3 cut(s) 1123, 1146, 1528
FalI AAGNNNNNCTT 4 cut(s) 1521, 1553, 1867, 1899
FaqI GGGAC 5 cut(s) 127, 428, 438, 716, 1164
FblI GTMKAC 2 cut(s) 518, 1804
Fnu4HI GCNGC 3 cut(s) 843, 997, 1000
FokI GGATG 3 cut(s) 702, 915, 1426
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 3 cut(s) 843, 997, 1000
FspBI CTAG 5 cut(s) 45, 233, 777, 1223, 1733
GlaI GCGC 1 cut(s) 946
GluI GCNGC 3 cut(s) 843, 997, 1000
GsuI CTGGAG 1 cut(s) 1953
HaeIII GGCC 3 cut(s) 345, 1837, 1980
HapII CCGG 1 cut(s) 155
HgaI GACGC 1 cut(s) 1485
HhaI GCGC 1 cut(s) 947
Hin6I GCGC 1 cut(s) 945
HinP1I GCGC 1 cut(s) 945
HincII GTYRAC 2 cut(s) 1866, 1939
HindII GTYRAC 2 cut(s) 1866, 1939
HindIII AAGCTT 1 cut(s) 1876
HpaII CCGG 1 cut(s) 155
HphI GGTGA 4 cut(s) 161, 253, 743, 1415
Hpy166II GTNNAC 5 cut(s) 372, 519, 1805, 1866, 1939
Hpy188III TCNNGA 4 cut(s) 1186, 1448, 1565, 1593
Hpy8I GTNNAC 5 cut(s) 372, 519, 1805, 1866, 1939
Hpy99I CGWCG 1 cut(s) 450
HpyAV CCTTC 4 cut(s) 83, 1223, 1511, 1715
HpyCH4III ACNGT 4 cut(s) 866, 1036, 1326, 1670
HpyCH4IV ACGT 1 cut(s) 1501
HpyF10VI GCNNNNNNNGC 2 cut(s) 1543, 1986
HpySE526I ACGT 1 cut(s) 1501
HspAI GCGC 1 cut(s) 945
KflI GGGWCCC 1 cut(s) 415
KpnI GGTACC 1 cut(s) 127
Kzo9I GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
LmnI GCTCC 2 cut(s) 603, 1994
Lsp1109I GCAGC 2 cut(s) 829, 1008
LweI GCATC 6 cut(s) 680, 1404, 1617, 1778, 1813, 1840
MaeI CTAG 5 cut(s) 45, 233, 777, 1223, 1733
MaeII ACGT 1 cut(s) 1501
MaeIII GTNAC 6 cut(s) 16, 354, 560, 860, 1036, 1553
MalI GATC 9 cut(s) 29, 153, 256, 397, 576, 637, 1102, 1144, 1446
MbiI CCGCTC 1 cut(s) 1002
MboI GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
MboII GAAGA 7 cut(s) 248, 523, 560, 1418, 1507, 1829, 1832
MflI RGATCY 4 cut(s) 395, 1100, 1142, 1444
MhlI GDGCHC 2 cut(s) 248, 1675
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 2 cut(s) 130, 483
MmeI TCCRAC 2 cut(s) 791, 1384
Mox20I TGGCCA 1 cut(s) 345
MroXI GAANNNNTTC 3 cut(s) 1341, 1502, 1588
MscI TGGCCA 1 cut(s) 345
MseI TTAA 9 cut(s) 108, 330, 504, 762, 977, 1094, 1160, 1329, 1784
MslI CAYNNNNRTG 4 cut(s) 339, 729, 1009, 1859
Msp20I TGGCCA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 656
MspCI CTTAAG 1 cut(s) 1093
MspI CCGG 1 cut(s) 155
MspR9I CCNGG 3 cut(s) 294, 312, 393
Mva1269I GAATGC 2 cut(s) 1395, 1924
MvaI CCWGG 3 cut(s) 294, 312, 393
MwoI GCNNNNNNNGC 2 cut(s) 1543, 1986
NcoI CCATGG 2 cut(s) 1123, 1146
NdeII GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
NlaIV GGNNCC 6 cut(s) 125, 416, 417, 599, 704, 1144
NmuCI GTSAC 4 cut(s) 16, 354, 860, 1036
NspI RCATGY 2 cut(s) 1483, 1561
OliI CACNNNNGTG 1 cut(s) 1009
PaeI GCATGC 1 cut(s) 1483
PagI TCATGA 1 cut(s) 1185
PciI ACATGT 1 cut(s) 1557
PctI GAATGC 2 cut(s) 1395, 1924
PdmI GAANNNNTTC 3 cut(s) 1341, 1502, 1588
PfeI GAWTC 9 cut(s) 215, 659, 806, 1129, 1178, 1342, 1466, 1521, 1760
PfoI TCCNGGA 1 cut(s) 292
PkrI GCNGC 3 cut(s) 844, 998, 1001
PleI GAGTC 2 cut(s) 130, 482
PpsI GAGTC 2 cut(s) 130, 482
PpuMI RGGWCCY 2 cut(s) 415, 773
PscI ACATGT 1 cut(s) 1557
PshBI ATTAAT 1 cut(s) 330
PsiI TTATAA 1 cut(s) 1251
Psp124BI GAGCTC 1 cut(s) 248
Psp1406I AACGTT 1 cut(s) 1501
Psp5II RGGWCCY 2 cut(s) 415, 773
Psp6I CCWGG 3 cut(s) 292, 310, 391
PspGI CCWGG 3 cut(s) 292, 310, 391
PspN4I GGNNCC 6 cut(s) 125, 416, 417, 599, 704, 1144
PspPI GGNCC 4 cut(s) 415, 703, 773, 1241
PspPPI RGGWCCY 2 cut(s) 415, 773
PsuI RGATCY 4 cut(s) 395, 1100, 1142, 1444
RsaI GTAC 3 cut(s) 125, 758, 1323
RsaNI GTAC 3 cut(s) 124, 757, 1322
RseI CAYNNNNRTG 4 cut(s) 339, 729, 1009, 1859
SacI GAGCTC 1 cut(s) 248
SaqAI TTAA 9 cut(s) 108, 330, 504, 762, 977, 1094, 1160, 1329, 1784
SatI GCNGC 3 cut(s) 843, 997, 1000
Sau3AI GATC 9 cut(s) 27, 151, 254, 395, 574, 635, 1100, 1142, 1444
Sau96I GGNCC 4 cut(s) 415, 703, 773, 1241
SchI GAGTC 2 cut(s) 130, 483
ScrFI CCNGG 3 cut(s) 294, 312, 393
SduI GDGCHC 2 cut(s) 248, 1675
SfaNI GCATC 6 cut(s) 680, 1404, 1617, 1778, 1813, 1840
SfcI CTRYAG 2 cut(s) 952, 1194
SinI GGWCC 4 cut(s) 415, 703, 773, 1241
SmiMI CAYNNNNRTG 4 cut(s) 339, 729, 1009, 1859
SmlI CTYRAG 1 cut(s) 1093
SmoI CTYRAG 1 cut(s) 1093
SphI GCATGC 1 cut(s) 1483
SsiI CCGC 3 cut(s) 183, 656, 1000
SspI AATATT 1 cut(s) 502
SspMI CTAG 5 cut(s) 45, 233, 777, 1223, 1733
SstI GAGCTC 1 cut(s) 248
StyD4I CCNGG 3 cut(s) 292, 310, 391
StyI CCWWGG 3 cut(s) 1123, 1146, 1528
TaaI ACNGT 4 cut(s) 866, 1036, 1326, 1670
TaiI ACGT 1 cut(s) 1504
TaqI TCGA 3 cut(s) 907, 1632, 1815
TatI WGTACW 1 cut(s) 1321
TauI GCSGC 1 cut(s) 1002
TfiI GAWTC 9 cut(s) 215, 659, 806, 1129, 1178, 1342, 1466, 1521, 1760
Tru1I TTAA 9 cut(s) 108, 330, 504, 762, 977, 1094, 1160, 1329, 1784
Tru9I TTAA 9 cut(s) 108, 330, 504, 762, 977, 1094, 1160, 1329, 1784
TscAI CASTG 7 cut(s) 199, 264, 645, 685, 808, 1045, 1675
TseFI GTSAC 4 cut(s) 16, 354, 860, 1036
TseI GCWGC 2 cut(s) 842, 996
Tsp45I GTSAC 4 cut(s) 16, 354, 860, 1036
TspGWI ACGGA 1 cut(s) 699
TspRI CASTG 7 cut(s) 199, 264, 645, 685, 808, 1045, 1675
Vha464I CTTAAG 1 cut(s) 1093
VpaK11BI GGWCC 4 cut(s) 415, 703, 773, 1241
VspI ATTAAT 1 cut(s) 330
XagI CCTNNNNNAGG 1 cut(s) 236
XapI RAATTY 1 cut(s) 1584
XceI RCATGY 2 cut(s) 1483, 1561
XmiI GTMKAC 2 cut(s) 518, 1804
XmnI GAANNNNTTC 3 cut(s) 1341, 1502, 1588
XspI CTAG 5 cut(s) 45, 233, 777, 1223, 1733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.