FvH4_3g26703

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000128
Physical Location & Seq
Reverse (-)
19857029 .. 19859799
2771 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26703.t1

Sequence Viewer

Length: 1833 bp
ATGTCTCAACTCGGCATCAATATCGACGAGTTATCTAAAAGTCGTCTCATGATCCAAGGTTTTAACCAAGGAGGGCAAAGAGCAATAGACATGGTTCAGCTAGACATGGTTATTAGCAAATTGAAGTCAAACACTTTGTTCCACGTGATCGATGCAAAGACTTCATACAACATATTGTTAGGGCGACCATGGGTTCATGAAAATGGTGTCGTACCTTCAACTCTGCATCAATGCTTCAAGTTCTATCGCGGAGGTGTGAAAACAGTGGTAGGTGATACCAAGCCATTCACCGAAGCTGAGTCTAACTCCGCGGATTCCAAGTTCTATCCGGATGAGGAATCGGTAATAGAAGTTCTTTCGATTGAAGTACCCTCAATAGGGAAGGCTACCGAGCTACAAAAGTCCAATCCAGCTGTCCCAGTCCTTCGATATGTGCCAAAGTCCAAGCGCAAGGAAGGAGAGTCTCCATTTGTGGGAGCAAAGCGGCAAGTAAGTCCTCGGAGGTTGGGTGAAGATGACATAAAATTATTGAAGGAAGAGTCGATATTGCCATTGACGAAGTTGAACGACCAAACTCTGACCAAGCAACCATTGAAAGGATTTGTCAAACCAGTCCAAGGAAGGGTAGAGCACGGGCCTTTACCGGAGAAAAGAACAAATGAAGGGTTTGACCCCAATGCTTACAAATTGTTGGCAAAGGCTGGATTCAACTTTGGTTCGTTGAGTAAAGAGGATGATCAAGTTGTGAGCAAAAAAGCACATGAGCTCAATGAGTCTCAAAAGAAGTTAAGAGAACAGGGAAAAACAAGTGATTTGGCTAAGCCGGGTCTTGGTTTTGTCCCAAGCAAGCCAATCAAAATCTCAGGCAAAAGAAAAGCGGAGAAGGCAAGCATGCAGTACATAAGCATTGAAGAAGTAGAAGATGAAACTCCACAAACCCAATTCGTCTCCCGCACTTCAGCGTTCAATCGCATCTGCCCAAGTTCTCGAAGTACTAGTACTGAATCAACAAGCAGAGTTTCGGTGTTTGAGAGTGTTGATAGGTCAATAAGTCGAAGCTCAGTCTTCAATCGTCTCAACACCTCAGCTACACGAACTTTTGTGTTTAAAAGGTTGTCATCGTCAAACGAAGAAAACAAACAGGTGGAGCCAACTCCTCGAAAGTCAGCACTTGAGAGGATCCAAGCTCCTAAAGAACAACAAAGGAGCAAAAGAAAAGAAGAAGTGAATTCGACTGACCAACTTAAAGTGAAGCAACATACCATCATACTCACTGGTCAAGACAAAGAAGGTGATGGTACTAGTGACGATAAGGGTGATATCGTTCAAAGTGATTATCACATCACAGTAGCGGAAGTGGAGGCTTATGAAGAGGATGACCATGAGGGCTCAGAATATGAAGTGGAGGCAGCTCCTCCAGAACTTGAAGATGGGGTGAAAGCTACAGTTGATGAACTTAAGGAGCTCAATTTGGGGACAGAGGAGGACCCAAGACCAATATTTGTGAGCGCATCACTAAGTCCCCAAGAAGAGAAGGAGTACTATGACTTGTTGCTCGAATATAAGGATGTCTTCGCTTGGACTTACAAAGAAATGCCAGGTCTTGACCCTAAGAAGAATGTGCCTTTCGAGTGGGATGAAGCATGTCACAACACTTTCAAAAGCATTAAAAAGTACTTGGCTAATCCTCCGGTGTTGGGTACACCCATTCCTGGGAAACCTCTTATCCTCTACATCGCAGCTCAAGAAAGATCACTTGGAGCCCTTCTAGCTCAAGAAAATGAAGAAAAGAGGGAGATAGCCTTGTACTATTTAAGTCGAACTCTCCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

611

Amino Acids

68.47

Weight (kDa)

5.94

Isoelectric Point (pI)

51.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 545 - 610 3.8e-11 RNase H-like domain found in reverse transcriptase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 249, 311
AccIII TCCGGA 1 cut(s) 328
AciI CCGC 7 cut(s) 249, 309, 311, 484, 878, 952, 1352
AclWI GGATC 3 cut(s) 46, 1174, 1187
AcsI RAATTY 1 cut(s) 1228
AcuI CTGAAG 1 cut(s) 942
AcvI CACGTG 1 cut(s) 145
AflII CTTAAG 1 cut(s) 1457
AhlI ACTAGT 2 cut(s) 995, 1301
AjnI CCWGG 2 cut(s) 1597, 1711
AjuI GAANNNNNNNTTGG 2 cut(s) 1740, 1772
AloI GAACNNNNNNTCC 2 cut(s) 305, 337
Alw21I GWGCWC 3 cut(s) 633, 768, 1467
Alw26I GTCTC 6 cut(s) 9, 50, 468, 780, 952, 1079
AlwI GGATC 3 cut(s) 46, 1174, 1187
Aor13HI TCCGGA 1 cut(s) 328
AoxI GGCC 1 cut(s) 635
ApeKI GCWGC 2 cut(s) 1409, 1739
ApoI RAATTY 1 cut(s) 1228
AspLEI GCGC 2 cut(s) 450, 1511
AspS9I GGNCC 2 cut(s) 635, 1486
AsuC2I CCSGG 1 cut(s) 825
AsuHPI GGTGA 6 cut(s) 280, 284, 521, 1304, 1328, 1447
AvaII GGWCC 1 cut(s) 1486
BamHI GGATCC 1 cut(s) 1179
BanII GRGCYC 4 cut(s) 768, 1391, 1467, 1765
BarI GAAGNNNNNNTAC 2 cut(s) 982, 1014
BbrPI CACGTG 1 cut(s) 145
BbsI GAAGAC 2 cut(s) 1057, 1564
Bbv12I GWGCWC 3 cut(s) 633, 768, 1467
BbvCI CCTCAGC 1 cut(s) 1084
BbvI GCAGC 2 cut(s) 1421, 1751
BccI CCATC 3 cut(s) 1271, 1289, 1424
BcgI CGANNNNNNTGC 2 cut(s) 4, 38
BciT130I CCWGG 2 cut(s) 1599, 1713
BclI TGATCA 1 cut(s) 736
BcnI CCSGG 1 cut(s) 825
BcoDI GTCTC 6 cut(s) 9, 50, 468, 780, 952, 1079
BcuI ACTAGT 2 cut(s) 995, 1301
BfaI CTAG 4 cut(s) 101, 996, 1302, 1769
BfmI CTRYAG 1 cut(s) 1443
BfrI CTTAAG 1 cut(s) 1457
BisI GCNGC 3 cut(s) 485, 1410, 1740
BlpI GCTNAGC 1 cut(s) 819
BlsI GCNGC 3 cut(s) 486, 1411, 1741
BmcAI AGTACT 4 cut(s) 994, 1000, 1541, 1676
Bme1390I CCNGG 3 cut(s) 825, 1599, 1713
Bme18I GGWCC 1 cut(s) 1486
BmgT120I GGNCC 2 cut(s) 635, 1486
BmiI GGNNCC 4 cut(s) 1149, 1181, 1488, 1762
BmrFI CCNGG 3 cut(s) 825, 1599, 1713
BmrI ACTGGG 1 cut(s) 413
BmsI GCATC 5 cut(s) 24, 142, 235, 981, 1520
BmuI ACTGGG 1 cut(s) 413
BpiI GAAGAC 2 cut(s) 1057, 1564
BplI GAGNNNNNCTC 2 cut(s) 290, 322
BpmI CTGGAG 1 cut(s) 1401
Bpu10I CCTNAGC 1 cut(s) 1084
Bpu1102I GCTNAGC 1 cut(s) 819
BpuEI CTTGAG 3 cut(s) 1193, 1728, 1758
BpuMI CCSGG 1 cut(s) 825
Bsa29I ATCGAT 1 cut(s) 150
BsaAI YACGTR 1 cut(s) 145
BsaJI CCNNGG 7 cut(s) 55, 67, 188, 309, 497, 616, 1712
BsaWI WCCGGW 3 cut(s) 328, 643, 1690
BsaXI ACNNNNNCTCC 2 cut(s) 493, 523
Bse1I ACTGG 3 cut(s) 419, 611, 1279
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 2 cut(s) 1599, 1713
BseCI ATCGAT 1 cut(s) 150
BseDI CCNNGG 7 cut(s) 55, 67, 188, 309, 497, 616, 1712
BseGI GGATG 5 cut(s) 337, 739, 1381, 1573, 1642
BseMII CTCAG 5 cut(s) 288, 876, 1074, 1098, 1404
BseNI ACTGG 3 cut(s) 419, 611, 1279
BseRI GAGGAG 3 cut(s) 1146, 1404, 1496
BseXI GCAGC 2 cut(s) 1421, 1751
Bsh1236I CGCG 2 cut(s) 249, 311
BshFI GGCC 1 cut(s) 637
BshVI ATCGAT 1 cut(s) 150
BsiHKAI GWGCWC 3 cut(s) 633, 768, 1467
BsiSI CCGG 4 cut(s) 329, 644, 824, 1691
BslFI GGGAC 4 cut(s) 401, 824, 1489, 1506
BsmAI GTCTC 6 cut(s) 9, 50, 468, 780, 952, 1079
BsmBI CGTCTC 3 cut(s) 50, 952, 1079
BsmFI GGGAC 4 cut(s) 401, 824, 1489, 1506
BsnI GGCC 1 cut(s) 637
Bsp1286I GDGCHC 5 cut(s) 633, 768, 1391, 1467, 1765
Bsp13I TCCGGA 1 cut(s) 328
Bsp143I GATC 5 cut(s) 51, 147, 736, 1179, 1751
Bsp1720I GCTNAGC 1 cut(s) 819
Bsp19I CCATGG 1 cut(s) 188
BspACI CCGC 7 cut(s) 249, 309, 311, 484, 878, 952, 1352
BspANI GGCC 1 cut(s) 637
BspCNI CTCAG 5 cut(s) 289, 875, 1073, 1097, 1403
BspDI ATCGAT 1 cut(s) 150
BspEI TCCGGA 1 cut(s) 328
BspFNI CGCG 2 cut(s) 249, 311
BspHI TCATGA 2 cut(s) 48, 196
BspLI GGNNCC 4 cut(s) 1149, 1181, 1488, 1762
BspPI GGATC 3 cut(s) 46, 1174, 1187
BspTI CTTAAG 1 cut(s) 1457
BsrI ACTGG 3 cut(s) 419, 611, 1279
BssECI CCNNGG 7 cut(s) 55, 67, 188, 309, 497, 616, 1712
BssMI GATC 5 cut(s) 51, 147, 736, 1179, 1751
BssT1I CCWWGG 4 cut(s) 55, 67, 188, 616
Bst2UI CCWGG 2 cut(s) 1599, 1713
Bst4CI ACNGT 3 cut(s) 265, 1348, 1447
Bst6I CTCTTC 3 cut(s) 531, 1365, 1524
BstAFI CTTAAG 1 cut(s) 1457
BstBAI YACGTR 1 cut(s) 145
BstC8I GCNNGC 3 cut(s) 848, 889, 893
BstDEI CTNAG 8 cut(s) 297, 819, 862, 1060, 1084, 1390, 1517, 1611
BstDSI CCRYGG 2 cut(s) 188, 309
BstF5I GGATG 5 cut(s) 337, 739, 1381, 1573, 1642
BstFNI CGCG 2 cut(s) 249, 311
BstHHI GCGC 2 cut(s) 450, 1511
BstKTI GATC 5 cut(s) 54, 150, 739, 1182, 1754
BstMAI GTCTC 6 cut(s) 9, 50, 468, 780, 952, 1079
BstMBI GATC 5 cut(s) 51, 147, 736, 1179, 1751
BstMWI GCNNNNNNNGC 2 cut(s) 884, 1769
BstNI CCWGG 2 cut(s) 1599, 1713
BstNSI RCATGY 2 cut(s) 895, 1647
BstSCI CCNGG 3 cut(s) 823, 1597, 1711
BstSFI CTRYAG 1 cut(s) 1443
BstUI CGCG 2 cut(s) 249, 311
BstV1I GCAGC 2 cut(s) 1421, 1751
BstV2I GAAGAC 2 cut(s) 1057, 1564
BstX2I RGATCY 1 cut(s) 1179
BstYI RGATCY 1 cut(s) 1179
Bsu15I ATCGAT 1 cut(s) 150
BsuRI GGCC 1 cut(s) 637
BsuTUI ATCGAT 1 cut(s) 150
BtgI CCRYGG 2 cut(s) 188, 309
BtgZI GCGATG 1 cut(s) 1720
BtsCI GGATG 5 cut(s) 337, 739, 1381, 1573, 1642
BtsIMutI CAGTG 2 cut(s) 270, 1272
Cac8I GCNNGC 3 cut(s) 848, 889, 893
CciI TCATGA 2 cut(s) 48, 196
CfoI GCGC 2 cut(s) 450, 1511
Cfr13I GGNCC 2 cut(s) 635, 1486
Cfr42I CCGCGG 1 cut(s) 312
ClaI ATCGAT 1 cut(s) 150
CviAII CATG 9 cut(s) 49, 91, 106, 189, 197, 761, 892, 1382, 1644
DdeI CTNAG 8 cut(s) 297, 819, 862, 1060, 1084, 1390, 1517, 1611
DpnI GATC 5 cut(s) 53, 149, 738, 1181, 1753
DpnII GATC 5 cut(s) 51, 147, 736, 1179, 1751
DraI TTTAAA 1 cut(s) 1108
Eam1104I CTCTTC 3 cut(s) 531, 1365, 1524
EarI CTCTTC 3 cut(s) 531, 1365, 1524
Ecl136II GAGCTC 2 cut(s) 766, 1465
Eco130I CCWWGG 4 cut(s) 55, 67, 188, 616
Eco24I GRGCYC 4 cut(s) 768, 1391, 1467, 1765
Eco32I GATATC 1 cut(s) 1321
Eco47I GGWCC 1 cut(s) 1486
Eco53kI GAGCTC 2 cut(s) 766, 1465
Eco57I CTGAAG 1 cut(s) 942
Eco72I CACGTG 1 cut(s) 145
EcoICRI GAGCTC 2 cut(s) 766, 1465
EcoO109I RGGNCCY 1 cut(s) 1486
EcoRI GAATTC 1 cut(s) 1228
EcoRII CCWGG 2 cut(s) 1597, 1711
EcoRV GATATC 1 cut(s) 1321
EcoT14I CCWWGG 4 cut(s) 55, 67, 188, 616
EcoT38I GRGCYC 4 cut(s) 768, 1391, 1467, 1765
ErhI CCWWGG 4 cut(s) 55, 67, 188, 616
Esp3I CGTCTC 3 cut(s) 50, 952, 1079
FaeI CATG 9 cut(s) 52, 94, 109, 192, 200, 764, 895, 1385, 1647
FalI AAGNNNNNCTT 2 cut(s) 1556, 1588
FaqI GGGAC 4 cut(s) 401, 824, 1489, 1506
FatI CATG 9 cut(s) 48, 90, 105, 188, 196, 760, 891, 1381, 1643
FauI CCCGC 1 cut(s) 959
FbaI TGATCA 1 cut(s) 736
Fnu4HI GCNGC 3 cut(s) 485, 1410, 1740
FokI GGATG 5 cut(s) 344, 746, 1388, 1580, 1649
FriOI GRGCYC 4 cut(s) 768, 1391, 1467, 1765
Fsp4HI GCNGC 3 cut(s) 485, 1410, 1740
FspBI CTAG 4 cut(s) 101, 996, 1302, 1769
GlaI GCGC 2 cut(s) 449, 1510
GluI GCNGC 3 cut(s) 485, 1410, 1740
GsuI CTGGAG 1 cut(s) 1401
HaeIII GGCC 1 cut(s) 637
HapII CCGG 4 cut(s) 329, 644, 824, 1691
HhaI GCGC 2 cut(s) 450, 1511
Hin1II CATG 9 cut(s) 52, 94, 109, 192, 200, 764, 895, 1385, 1647
Hin6I GCGC 2 cut(s) 448, 1509
HinP1I GCGC 2 cut(s) 448, 1509
HinfI GANTC 8 cut(s) 299, 314, 338, 461, 539, 705, 773, 1004
HpaII CCGG 4 cut(s) 329, 644, 824, 1691
HphI GGTGA 6 cut(s) 280, 284, 521, 1304, 1328, 1447
Hpy166II GTNNAC 1 cut(s) 1703
Hpy188I TCNGA 3 cut(s) 501, 579, 1393
Hpy188III TCNNGA 9 cut(s) 49, 197, 329, 987, 1280, 1418, 1604, 1745, 1775
Hpy8I GTNNAC 1 cut(s) 1703
Hpy99I CGWCG 1 cut(s) 29
HpyCH4III ACNGT 3 cut(s) 265, 1348, 1447
HpyCH4IV ACGT 1 cut(s) 144
HpyCH4V TGCA 3 cut(s) 155, 226, 895
HpyF10VI GCNNNNNNNGC 2 cut(s) 884, 1769
HpyF3I CTNAG 8 cut(s) 297, 819, 862, 1060, 1084, 1390, 1517, 1611
HpySE526I ACGT 1 cut(s) 144
Hsp92II CATG 9 cut(s) 52, 94, 109, 192, 200, 764, 895, 1385, 1647
HspAI GCGC 2 cut(s) 448, 1509
Kpn2I TCCGGA 1 cut(s) 328
Ksp22I TGATCA 1 cut(s) 736
KspI CCGCGG 1 cut(s) 312
Kzo9I GATC 5 cut(s) 51, 147, 736, 1179, 1751
LmnI GCTCC 7 cut(s) 476, 1147, 1192, 1206, 1417, 1462, 1760
Lsp1109I GCAGC 2 cut(s) 1421, 1751
LweI GCATC 5 cut(s) 24, 142, 235, 981, 1520
MaeI CTAG 4 cut(s) 101, 996, 1302, 1769
MaeII ACGT 1 cut(s) 144
MaeIII GTNAC 2 cut(s) 1304, 1646
MalI GATC 5 cut(s) 53, 149, 738, 1181, 1753
MboI GATC 5 cut(s) 51, 147, 736, 1179, 1751
MflI RGATCY 1 cut(s) 1179
MhlI GDGCHC 5 cut(s) 633, 768, 1391, 1467, 1765
MluCI AATT 6 cut(s) 119, 524, 686, 941, 1228, 1468
MlyI GAGTC 4 cut(s) 308, 470, 548, 782
MroI TCCGGA 1 cut(s) 328
MseI TTAA 7 cut(s) 63, 788, 1107, 1245, 1458, 1668, 1814
MslI CAYNNNNRTG 1 cut(s) 201
MspA1I CMGCKG 2 cut(s) 311, 413
MspCI CTTAAG 1 cut(s) 1457
MspI CCGG 4 cut(s) 329, 644, 824, 1691
MspR9I CCNGG 3 cut(s) 825, 1599, 1713
MvaI CCWGG 2 cut(s) 1599, 1713
MvnI CGCG 2 cut(s) 249, 311
MwoI GCNNNNNNNGC 2 cut(s) 884, 1769
NciI CCSGG 1 cut(s) 825
NcoI CCATGG 1 cut(s) 188
NdeII GATC 5 cut(s) 51, 147, 736, 1179, 1751
NlaIII CATG 9 cut(s) 52, 94, 109, 192, 200, 764, 895, 1385, 1647
NlaIV GGNNCC 4 cut(s) 1149, 1181, 1488, 1762
NmuCI GTSAC 2 cut(s) 1304, 1646
NspI RCATGY 2 cut(s) 895, 1647
PaeI GCATGC 1 cut(s) 895
PagI TCATGA 2 cut(s) 48, 196
PfeI GAWTC 4 cut(s) 314, 338, 705, 1004
PkrI GCNGC 3 cut(s) 486, 1411, 1741
PleI GAGTC 4 cut(s) 307, 469, 547, 781
PmaCI CACGTG 1 cut(s) 145
PmlI CACGTG 1 cut(s) 145
PpsI GAGTC 4 cut(s) 307, 469, 547, 781
Ppu21I YACGTR 1 cut(s) 145
PpuMI RGGWCCY 1 cut(s) 1486
Psp124BI GAGCTC 2 cut(s) 768, 1467
Psp5II RGGWCCY 1 cut(s) 1486
Psp6I CCWGG 2 cut(s) 1597, 1711
PspCI CACGTG 1 cut(s) 145
PspGI CCWGG 2 cut(s) 1597, 1711
PspN4I GGNNCC 4 cut(s) 1149, 1181, 1488, 1762
PspPI GGNCC 2 cut(s) 635, 1486
PspPPI RGGWCCY 1 cut(s) 1486
PsrI GAACNNNNNNTAC 2 cut(s) 336, 368
PsuI RGATCY 1 cut(s) 1179
PvuII CAGCTG 1 cut(s) 413
RseI CAYNNNNRTG 1 cut(s) 201
SacI GAGCTC 2 cut(s) 768, 1467
SacII CCGCGG 1 cut(s) 312
SaqAI TTAA 7 cut(s) 63, 788, 1107, 1245, 1458, 1668, 1814
SatI GCNGC 3 cut(s) 485, 1410, 1740
Sau3AI GATC 5 cut(s) 51, 147, 736, 1179, 1751
Sau96I GGNCC 2 cut(s) 635, 1486
ScaI AGTACT 4 cut(s) 994, 1000, 1541, 1676
SchI GAGTC 4 cut(s) 308, 470, 548, 782
ScrFI CCNGG 3 cut(s) 825, 1599, 1713
SduI GDGCHC 5 cut(s) 633, 768, 1391, 1467, 1765
SfaNI GCATC 5 cut(s) 24, 142, 235, 981, 1520
SfcI CTRYAG 1 cut(s) 1443
Sfr303I CCGCGG 1 cut(s) 312
SgrBI CCGCGG 1 cut(s) 312
SinI GGWCC 1 cut(s) 1486
SmiMI CAYNNNNRTG 1 cut(s) 201
SmlI CTYRAG 4 cut(s) 1172, 1457, 1743, 1773
SmoI CTYRAG 4 cut(s) 1172, 1457, 1743, 1773
SpeI ACTAGT 2 cut(s) 995, 1301
SphI GCATGC 1 cut(s) 895
Sse9I AATT 6 cut(s) 119, 524, 686, 941, 1228, 1468
SsiI CCGC 7 cut(s) 249, 309, 311, 484, 878, 952, 1352
SspI AATATT 1 cut(s) 1500
SspMI CTAG 4 cut(s) 101, 996, 1302, 1769
SstI GAGCTC 2 cut(s) 768, 1467
StyD4I CCNGG 3 cut(s) 823, 1597, 1711
StyI CCWWGG 4 cut(s) 55, 67, 188, 616
TaaI ACNGT 3 cut(s) 265, 1348, 1447
TaiI ACGT 1 cut(s) 147
TasI AATT 6 cut(s) 119, 524, 686, 941, 1228, 1468
TatI WGTACW 6 cut(s) 897, 992, 998, 1539, 1674, 1806
TauI GCSGC 1 cut(s) 487
TfiI GAWTC 4 cut(s) 314, 338, 705, 1004
Tru1I TTAA 7 cut(s) 63, 788, 1107, 1245, 1458, 1668, 1814
Tru9I TTAA 7 cut(s) 63, 788, 1107, 1245, 1458, 1668, 1814
TscAI CASTG 2 cut(s) 270, 1279
TseFI GTSAC 2 cut(s) 1304, 1646
TseI GCWGC 2 cut(s) 1409, 1739
Tsp45I GTSAC 2 cut(s) 1304, 1646
TspRI CASTG 2 cut(s) 270, 1279
Vha464I CTTAAG 1 cut(s) 1457
VpaK11BI GGWCC 1 cut(s) 1486
XapI RAATTY 1 cut(s) 1228
XceI RCATGY 2 cut(s) 895, 1647
XspI CTAG 4 cut(s) 101, 996, 1302, 1769
ZrmI AGTACT 4 cut(s) 994, 1000, 1541, 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.