pycom11g02350

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2021698 .. 2029251
7554 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g02350.3

Sequence Viewer

Length: 6876 bp
ATGAATGAAGCAATCGCAAGGCTCACACGGACTGTGGAAGAGAAGGACTTGCAGATTGCCGCACTTGTCAACCAACTAGATGCGCTGCCCGACGTGAAAGTCGACCCAAATATTGGCCTATTAAAGAAAGAAGACGACGAAGAAGAGGAGCCACCAGTGGAGAAAGTTGAAGAGAAGTTGAAGCTAGACCAATCAACGGCATTCATGGGATCGCTCTCTATCCAGCAGCTACAGGAGATGATCGCAAGCACTGTCAAGACACAGTACGAAGGAAGCTCGCATGACTCCGTACTGTACTCAAAGCCTTACTCCAAGAAGATTGATGCTTTGAAGATGCCAAGGGGTTATCAGCCCCCAAAATTCATGCAGTTCGATGGAAAAGGCAACCCGAAGCAACATGTCGCCCATTTCATTGAAACTTGCAACAATGCTGGGACAGAGGGAGACTACCTCGTCAAACAGTTCGTGCGTTCGCTGAAAAGTAACGCTTTTGACTGGTACACTGACCTCGAACCTGAGTCTATCAACAGTTGGGACCAGCTAGAAAGGGAATTCCTCAACCGTTTCTACAATGTGCGTTCAAGGCATCTGAGTATCGCTAATCATGGGAAAAATGAGCCAATTACTAACTTCAATAAGGAGAAAGTATTCGCCCCAAATGTAGACAAGACCGGGAAGAAGCCCGCTAAGGAAGCTTTCACCGTCAACACTACCCCCATCAAGACCTCTTCAGCGCCCATCAAGACCTCCTCAGCGCCCATCAAGACCTCCTCAACGCCCATCAAGATCTCCTCCAAGAAGAAAGCGAAGGAGATAAAGACAAGTGAGCCTTCTCGCACCCAAGACAGATACAAGAGCACCTTGAGAGAGTTGGAACAGAAAACGTACCCTTTTCCTGACTCTGACATGGCTGCCATGTTAGATGACTTGCTGGAAAAAAAGGTGATTGAGCTACCCGAATGCAAGCGTCCTGAAGAAATGAATCGCACAAACGATCCTAGGTACTGCAAGTACCATCGTATTGTGAGCCATCCTGTTGGCAAGTGCTTCGTTCTCAAAGAACTCATCATGAAGCTAGCACAACAAGGGCAAATTGAGCTCGACCTTGAGGACACGGCCGCAACGCATACCACTACAATTGCGTTTGGATCGTTTAATCCTGTGCCTCTCCAAATGACACCTGACCGTTCCCGTGAATGCTTAAGTTGCACGGCACCTCCTACACAACCATCACTGGAGAGAAGCGACCAAGATACACATGCTGATGATGAAGAAGGATGGATATTGGTAACCTACAAAAAGACAAGGAAACCAAGACCACAAGTCATACAGCCAAAGGTGGAACAAAGAAGAAATCACCACGGCCGTAACAATGCGAAGCCTAGAAGAAACATAAAGCATAATAAAACAACATATGCTAGGGAACCTATGGAGCAGGAGCCACGCATTCCCGTTTCTTTACGTGAGTACTTCCCGAATGACTTTTTCCAACAGTGCACTACCGTGGCCTGTCACATGGTTGAAGTAGAAATAGAAGAGCCCTCAAAAGGCAAAGCTATCGCCACTGAGGTAGAAAAGACCCTTACACCTGGAGAAGGTCTGCCAACACACTTTAGCATCGAGGAAGCGCTACCATTGCCAAAAAAGATGCGAAGAGCACTAGCAGCAGTCTTGGCAGGTCCCGACGACCACGAAGTGCAAGAAAGTAACGACGAAGGCTCGAAGCTTCAGCCACATGAATGTGCCACATGTTGTGCCACCCATGACGTAATTAACTTCACTGACGAAGACCTACTGTTGGGATCAAAGCCTCACAACCGTCATCTCTTCGTCTCCGGGTACATAAAGGAATACAAAGTCAACCGCATGCTTGTGGATGGTGGGTCGGCCATAAACATCATGCCAAAATCAACAATGACCATAATCGGCATCAAGGTGAATGAACTATCCCTGAGCCGTCTGTTGATCCAGGGTTTTAACCAAGGAGGACAAAGGGCGATAAGCATGATCCGAGTAGAGATGACCATGGGTGAGCTCAAATCAAGCACGATATTCCACGTGATTGATGCAAGAACTTCCTATAGCTTGCTCTTAGGAAGACCTTGGATCCACGCAAATGGGGTAGTGCCGTCCACCCTTCATCAATGCCTAAAATTTTACCGAGAAGGAGTGAAGGTGATCCAAGGTGATACCAAACCGTTCACCGAAGCTGAATCACACTTTGCAGATGCCAAGTTCTACATGGATGAAGAGACGGTACCCGAAGCCCTTCCGGAAGAGATCAAATCCACGGGCAGAGCAGCACCTAAAAAGCAGGAGTGGCAAGCCATGCCTAAAAAGCAAAAAGAGCAGGCCGTGCCATCTTCAAGCAAAGACGATGACGAGCTTGCTAAACCTGCAACAACCAAAGGGAGTAGGATGCCGTCAGAAGGACCGAACGCACCCATATTCCGGTATATCCCAATGTCAAGAAGAAAGAATGGTCAATCTCCATTCGAAACTAGAAAAGCCGATACACAGTGGCACACGGATAATGTGAACTTGCTCAAGACAAATGCAGTTTTGCCTTTGACACAGCTCGGGGGTGCTAAGGTCGCAAGACTACCACAAGGCTTCATAAAAGCTCTACCAAAGAAGGTGGAATCAAGCTTTCTTCCAACCAAGAGGACCGAGGAAGGTTTCGACCCTAACGCCTACAAACTCATGTCAAAGGCCGGGTACGACTTCACTTCTTCTGCAGTGGCTGGAAAGAAGGTTTCAAACACTGTCAATGACGAAGAACGTAACCTCACCAAAACTCAAAAGAAGTTGAAGGAGCATGGTTACGGAGTTGACAATAACAAAGCCGGACTTGGTTTCACACCAAATGCACCTGTGATGATTTCAAGCCAAGTGAAAAACACTAGCACTCAATATGTCAGCATGAGCATTGAACAAGATCAAGAAGAGCCTAAACCCTCCCCTCGGACGTCGGTCTTCGATAGGATGAGCCATTCAAGCTTCAGAACTTCAGTGTTTAATCGCATTGGTGGTCAAGATCGATCCTCTGTCTTCAAGAGACTTAACGCGCCGACATCCCAAAGCTCTGTTTTTGAAAGGTTGTTAAAGCTTAAGAAACAAAGCAACACAGTTATCTTTCCTCTGCGACGATCAGCTTCAGAAAGATTTGAAGATAATGAGAAACCTTTTGGAAAGAGGAAGACAACCCCAAAGGCAGAAAAGCTCGATGGGTTAGGAGAAAATGACGACCTTCGAAAACGTGAAGATGAAGGATGGATTCATGTCACTCCGAAGAAACTGCACGAGAAACATATATCTTGTCCACAAGTTCACCAATCGGAAAGGGGGAGGGAAAGCAGCTTTCGCCAACCTCCAGAACAATGTGAAAGTGTTGGAGATAATGAAATTTCGACACAAAGATCGTCCATCCCCATCACAATGTGTGACCTCTTCCCAGAAGACTTCTTCAATTACTCGGTCAAGGCTCCTTCCTATGAAGATTGCGAGGAACGCCTCTCCCAGAACACCAGACAATCCTTATGCCAACAAGCTCGAGAAGACAGCACTGAAGAGGAGATCCAAGATGTTTTCCACATCACGGTTCAAGAAGGTGAAGAAGACGAAATCCCCGAGGAAGATGTCACTGCTGCGCCACCACAGCTCAAAGATGGGGAGCAAGCCACGGTCGATGATCTCAAGGAACTCAACTTAGGTACAAGCAAGGAACCAAAGCCTATCTTTGTAAGTGCATTATTAAGTACAGATGAGATAAAGGAGTATTATCAGCTGTTGTTAGAGTACAAAGACGTCTTTGCCTGGACCTACAAAGAAATGCCCGGCCTAGACCCTATCATCGCTGTTCATCATCTTGCGGTCAGGCTTGGAACACGACCGATAAAGCAAACTCAAAGACGCTATCGATCTGAGCTTATCCCACAAATCGAGGTCGAGATTGACAAGCTAATCGAAGCAGGCTTTATTCAAGAAGTGCAATACCCCAAGTGGATCTCCAACATCGTCATTGTCCTTAAGAAATCAGGACAAATACGTGTTTGCGTAGACTTCCGGGACCTCAACGATGCTTGCCCAAAGGATGACTTCCCCTTGCCAATCATTGAAATCATGGTGGATGCAACCACTGGCCATGAGGCATTATCATTCATGGATGGCTCTTCTGGGTACAATCAAATTCGCATGGCCCTCGAAGACGAGGAACTAACAGCCTTTCGTACTCCAAAAGGTATCTACTGCTACAAGGTAATGCCCTTTGGTCTAAAGAACGCTGGAGCTACGTATCAACGCGCAATGCAGAAAATCTTCAATGACATGCTACACAAAAACGTAGAATGTTACGTTGATGATGTGGTGGTTAAGACGAAGAAAAGATCAGACCACTTGAAGGATCTGCGAATAGTGTTCGAAAGGCTGCGAAAATACAACCTCAAGATGAACCCGTTAAAGTGTGCGTTTGGCGTCACCTCTGGAAAATTCCTCGGCTTCATCGTCAAGCACCGTGGCATTGAAGTAGACCAATCAAAGATCAAGGCCATTCAAAGCATGCCCGAGCTAAGAAACCTGCACGAGCTGAAAAGTCTACAAGGACGGCTAGCCTTCATCAGACGCTTCATCTCCAACCTCGCAGGGCGTTGTCAACCGTTTAGTCGCCTTATGAAGAAAGATGTTCCATTCGTATGGGACAAAGCATGCCATAATGCTTTTGAAAGCATAAAGAAATATTTGTCAAGTCCACCTGTCCTGGGGGCACCTATGCCCGGGAAACCACTCATATTGTATATTGCTGCTCAGGAAAGTTCAATCGGAGCACTCTTGGCGCAAGAGAATGAATCCCAAAAGGAAGGAGCACTTTACTACCTTAGTCGAACTCTCACCGGCGCTGAGTTGAACTATTCCCCAATAGAAAAGATGTGCCTCGCTTTGGTGTTTGCCATCCAGAAACTCAGACATTACATGCATGCTTACACCATCCACTTGGTTGCTAAAGCCGACCCTGTCAAATACGTTATGACTAAGCCAGTCTTGACAGGGCGACTCGCTAAATGGGCTTTGCTTCTTAATCAATACGAGATCATCTACGTCCCAGCTAAAGCCATCAAGGGACAAGCGCTAGCAGACTTCCTGGCCGATCATCCAATCCCGGCTGATTGGAAAATCTCAGACGACTTGCCTGACGAGGAGGTGTTCTACATCGACATCTTCCCGACATGGACGATGTTCTTCGACGGATCCGCACGAGCAGATGGAGCGGGGGCAGGAGTAGTATTCATGTCACCACAAAGGCACATACTACCTTACTCCTTCCAACTGAATGAGCTATGCTCCAACAATGTTGCTGAGTACCAAGCATTGATCATCAGGCTCCAAATGGCGATCAACATGGAAATCACAGCTCTTGAGGTATATGGCGATTCCAAGCTCATAATCAACCAACTCTTAACTGAATATGAGGTGAGGAAAGATGATCTCGTCCCATACTTCCGGCTAGCGACCCAACTGCTACAAAAGTTCGAAGCTGTGACACTAGAACATGTGCCAAGAAAGGAAAATCAAATGGCAGACGCTCTCGCCAATCTAGCCTCGAGTATGACACTAGGAAAAGATGAAGTTGCAGACGTGCCAGTTTGCCAAAGATGGGTGATTCCGCTCGTTAATGAAATGTCACTAGATGATACAAATGTCATCTCAGTACTTCCAGTCGATGCTGAAGAGTGGAGACAGCCGCTGATCGACTACTTAGAGCACGGAAAGCTTCCAGATGATCTTAGACACCGTTCCGAAGTACGTCGACGAGCACCTCGCTTCCTTTACTACAAAGGAACACTCTACCGACGCTCTTTTGAAGGACTGCTCCTGAGATGCCTAGGTGAGGAAGAAGTTAATCAAGCCATGGAAGAAGCACATTCAGGTGTGTGTGGGGCACATCAATCTGGACCAAAGCTACATTTCCAGCTTAAAAGAATGGGTTACTACTGGCCGAGCATGGTGAAGGACTGCCTGGAACACGCCAAAAGGTGCCAAGCCTGCCAATTCCACGCCAACTTCATACATCAACCGCCTGAACCATTACACCCTACAGTTGCTTCATGGCCGTTCGACGCATGGGGATTGGACGTTGTAGGACCAATTACGCCAAAGTCATCTGCAGGGGAAGCTTACATCCTAGCTGCAACAGATTACTTCTCCAAGTGGGCTGAAGCCATACCTTTAAGGGAAGTAAAAAAGGAAACTGTTGTTCGTTTCATCAAGGAGCATATCATCCACCGATATGGGGTGCCTCGCTACATTATCACTGACAACGGAAAGCAGTTCTCCAACCGACTCGTGGACGAGCTTTGTGACAAATACAAGTTCAAGCAGCACAAGTCTTCCATGTATCATGCGCCAGCCAACGGCCTCGCGGAAGCATTCAACAAGACGCTGTGCAACCTCCTGAAAAAGGTAATCGGCCGAACAAAGAGAGACTGGCATGAAAGAATAAGTGAAGCACTTTGGGCATATAGGACTACACATAGGACTCCTACCCAAGCTACACCTTATTCTCCCGTATATGGCGTAGAAGCTGTTCTACCGCTCGAAAGTCAAATTCCCTCACTAAGGATGGCTATACAAGAAGGCTTGACTGATGAAGAAAATGCAAAGTTGCGCCTTCAGGAGTTGGAAGCACTGGATGAGAGGAGGCTCGAAGCTCAACAACACTTGGAATGCTACCAAGCACGGTTATCCAAGGCATTCAACAAGAAAGTCCGCCCAAGGTCTTTCCAAGCCGGATCGATCTCGTGCTGGCATTGCGTAGGCCTATCATTACAACTCATAAGACAAAAAGCAAGTTCACATCAAAATGGGATGGACTCTACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2292

Amino Acids

260.36

Weight (kDa)

7.92

Isoelectric Point (pI)

49.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 98, 452
AatII GACGTC 2 cut(s) 2972, 3810
Acc36I ACCTGC 3 cut(s) 1667, 2404, 4584
Acc65I GGTACC 1 cut(s) 2257
AccB1I GGYRCC 5 cut(s) 1213, 2257, 4762, 6030, 6289
AccB7I CCANNNNNTGG 1 cut(s) 113
AccBSI CCGCTC 3 cut(s) 5264, 5662, 6589
AccI GTMKAC 6 cut(s) 102, 663, 4059, 4527, 4594, 5803
AccII CGCG 3 cut(s) 3068, 4302, 6416
AccIII TCCGGA 1 cut(s) 2272
AcoI YGGCCR 8 cut(s) 1116, 1363, 1887, 4141, 5139, 5990, 6104, 6463
AcsI RAATTY 7 cut(s) 359, 551, 2153, 3405, 4188, 4487, 6600
AcvI CACGTG 1 cut(s) 2059
AcyI GRCGYC 3 cut(s) 2969, 3807, 4473
AdeI CACNNNGTG 2 cut(s) 1696, 3441
AfeI AGCGCT 2 cut(s) 1629, 5124
AflII CTTAAG 3 cut(s) 1201, 3110, 4028
AflIII ACRYGT 4 cut(s) 397, 1748, 4048, 5545
AhdI GACNNNNNGTC 1 cut(s) 1322
AjiI CACGTC 2 cut(s) 94, 5632
AjnI CCWGG 6 cut(s) 1588, 1968, 3815, 4755, 5136, 6012
AleI CACNNNNGTG 1 cut(s) 1502
Alw21I GWGCWC 9 cut(s) 860, 1101, 1499, 1660, 2037, 4825, 4864, 5760, 5812
Alw26I GTCTC 6 cut(s) 438, 1837, 2246, 3052, 5725, 6471
Alw44I GTGCAC 1 cut(s) 1495
AlwNI CAGNNNCTG 2 cut(s) 2744, 5740
Ama87I CYCGRG 6 cut(s) 2579, 3552, 3629, 4562, 4772, 5596
Aor13HI TCCGGA 1 cut(s) 2272
Aor51HI AGCGCT 2 cut(s) 1629, 5124
ApaLI GTGCAC 1 cut(s) 1495
ApoI RAATTY 7 cut(s) 359, 551, 2153, 3405, 4188, 4487, 6600
Asp700I GAANNNNTTC 4 cut(s) 647, 2268, 4316, 6579
Asp718I GGTACC 1 cut(s) 2257
AspA2I CCTAGG 2 cut(s) 998, 5878
AspS9I GGNCC 9 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 4198, 5948, 6137
AsuC2I CCSGG 8 cut(s) 673, 1837, 2716, 3837, 4067, 4773, 4774, 5156
AsuII TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
AsuNHI GCTAGC 4 cut(s) 1075, 4606, 5125, 5500
AvaI CYCGRG 6 cut(s) 2579, 3552, 3629, 4562, 4772, 5596
AvaII GGWCC 8 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 5948, 6137
AvrII CCTAGG 2 cut(s) 998, 5878
BaeGI GKGCMC 3 cut(s) 1499, 4765, 5938
BaeI ACNNNNGTAYC 2 cut(s) 5679, 5712
BalI TGGCCA 1 cut(s) 4143
BamHI GGATCC 2 cut(s) 2106, 5243
BanI GGYRCC 5 cut(s) 1213, 2257, 4762, 6030, 6289
BanII GRGCYC 3 cut(s) 1101, 1542, 2037
BarI GAAGNNNNNNTAC 4 cut(s) 2241, 2273, 6567, 6599
BauI CACGAG 5 cut(s) 3302, 4580, 5250, 6338, 6793
BbrPI CACGTG 1 cut(s) 2059
Bbv12I GWGCWC 9 cut(s) 860, 1101, 1499, 1660, 2037, 4825, 4864, 5760, 5812
BbvCI CCTCAGC 1 cut(s) 751
BciT130I CCWGG 6 cut(s) 1590, 1970, 3817, 4757, 5138, 6014
BclI TGATCA 1 cut(s) 5367
BcnI CCSGG 8 cut(s) 673, 1837, 2716, 3837, 4067, 4773, 4774, 5156
BcoDI GTCTC 6 cut(s) 438, 1837, 2246, 3052, 5725, 6471
BfmI CTRYAG 5 cut(s) 230, 2080, 2736, 6090, 6159
BfoI RGCGCY 5 cut(s) 737, 758, 1631, 4896, 5126
BfrI CTTAAG 3 cut(s) 1201, 3110, 4028
BfuAI ACCTGC 3 cut(s) 1667, 2404, 4584
BglII AGATCT 1 cut(s) 786
BlnI CCTAGG 2 cut(s) 998, 5878
BmcAI AGTACT 2 cut(s) 1469, 5706
Bme18I GGWCC 8 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 5948, 6137
BmeRI GACNNNNNGTC 1 cut(s) 1322
BmeT110I CYCGRG 6 cut(s) 2579, 3552, 3629, 4562, 4772, 5596
BmgBI CACGTC 2 cut(s) 94, 5632
BmgT120I GGNCC 9 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 4198, 5948, 6137
BmtI GCTAGC 4 cut(s) 1079, 4610, 5129, 5504
BoxI GACNNNNGTC 1 cut(s) 2972
BplI GAGNNNNNCTC 4 cut(s) 435, 467, 5321, 5353
BpmI CTGGAG 4 cut(s) 1256, 1611, 3357, 4305
Bpu10I CCTNAGC 5 cut(s) 687, 751, 1952, 2589, 4803
Bpu14I TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
BpuEI CTTGAG 6 cut(s) 883, 1127, 2531, 3680, 4427, 5432
BpuMI CCSGG 8 cut(s) 673, 1837, 2716, 3837, 4067, 4773, 4774, 5156
Bsa29I ATCGAT 3 cut(s) 3040, 3919, 6788
BsaAI YACGTR 5 cut(s) 1463, 2059, 4049, 4293, 6873
BsaHI GRCGYC 3 cut(s) 2969, 3807, 4473
BsaWI WCCGGW 2 cut(s) 2272, 2451
BsaXI ACNNNNNCTCC 4 cut(s) 1201, 1231, 2160, 2190
Bse118I RCCGGY 1 cut(s) 4889
Bse3DI GCAATG 3 cut(s) 1634, 4311, 6802
BseAI TCCGGA 1 cut(s) 2272
BseBI CCWGG 6 cut(s) 1590, 1970, 3817, 4757, 5138, 6014
BseCI ATCGAT 3 cut(s) 3040, 3919, 6788
BseMI GCAATG 3 cut(s) 1634, 4311, 6802
BseRI GAGGAG 7 cut(s) 161, 739, 760, 781, 3587, 5207, 6706
BseSI GKGCMC 3 cut(s) 1499, 4765, 5938
BseX3I CGGCCG 3 cut(s) 1116, 1363, 6463
BseYI CCCAGC 2 cut(s) 431, 5098
BsgI GTGCAG 2 cut(s) 3284, 4562
Bsh1236I CGCG 3 cut(s) 3068, 4302, 6416
Bsh1285I CGRYCG 5 cut(s) 1119, 1366, 3687, 3893, 6466
BshNI GGYRCC 5 cut(s) 1213, 2257, 4762, 6030, 6289
BshVI ATCGAT 3 cut(s) 3040, 3919, 6788
BsiEI CGRYCG 5 cut(s) 1119, 1366, 3687, 3893, 6466
BsiHKAI GWGCWC 9 cut(s) 860, 1101, 1499, 1660, 2037, 4825, 4864, 5760, 5812
BsiHKCI CYCGRG 6 cut(s) 2579, 3552, 3629, 4562, 4772, 5596
BslFI GGGAC 8 cut(s) 448, 548, 1665, 4082, 4709, 5081, 5130, 5471
BsmAI GTCTC 6 cut(s) 438, 1837, 2246, 3052, 5725, 6471
BsmBI CGTCTC 2 cut(s) 1837, 2246
BsmFI GGGAC 8 cut(s) 448, 548, 1665, 4082, 4709, 5081, 5130, 5471
BsmI GAATGC 7 cut(s) 200, 965, 1202, 1446, 6422, 6725, 6746
BsoBI CYCGRG 6 cut(s) 2579, 3552, 3629, 4562, 4772, 5596
Bsp119I TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
Bsp13I TCCGGA 1 cut(s) 2272
Bsp19I CCATGG 2 cut(s) 2025, 5904
BspDI ATCGAT 3 cut(s) 3040, 3919, 6788
BspEI TCCGGA 1 cut(s) 2272
BspFNI CGCG 3 cut(s) 3068, 4302, 6416
BspHI TCATGA 1 cut(s) 1068
BspMAI CTGCAG 2 cut(s) 2740, 6163
BspMI ACCTGC 3 cut(s) 1667, 2404, 4584
BspOI GCTAGC 4 cut(s) 1079, 4610, 5129, 5504
BspQI GCTCTTC 4 cut(s) 1530, 1648, 2940, 4177
BspT104I TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
BspT107I GGYRCC 5 cut(s) 1213, 2257, 4762, 6030, 6289
BspTI CTTAAG 3 cut(s) 1201, 3110, 4028
BsrBI CCGCTC 3 cut(s) 5264, 5662, 6589
BsrDI GCAATG 3 cut(s) 1634, 4311, 6802
BsrFI RCCGGY 1 cut(s) 4889
BssAI RCCGGY 1 cut(s) 4889
BssNI GRCGYC 3 cut(s) 2969, 3807, 4473
BssSI CACGAG 5 cut(s) 3302, 4580, 5250, 6338, 6793
Bst2BI CACGAG 5 cut(s) 3302, 4580, 5250, 6338, 6793
Bst2UI CCWGG 6 cut(s) 1590, 1970, 3817, 4757, 5138, 6014
BstACI GRCGYC 3 cut(s) 2969, 3807, 4473
BstAFI CTTAAG 3 cut(s) 1201, 3110, 4028
BstAPI GCANNNNNTGC 2 cut(s) 2329, 2356
BstBAI YACGTR 5 cut(s) 1463, 2059, 4049, 4293, 6873
BstBI TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
BstDSI CCRYGG 7 cut(s) 1360, 1503, 2025, 2289, 3681, 4513, 5904
BstEII GGTNACC 1 cut(s) 1288
BstENI CCTNNNNNAGG 4 cut(s) 1593, 5882, 6452, 6610
BstFNI CGCG 3 cut(s) 3068, 4302, 6416
BstH2I RGCGCY 5 cut(s) 737, 758, 1631, 4896, 5126
BstMAI GTCTC 6 cut(s) 438, 1837, 2246, 3052, 5725, 6471
BstMCI CGRYCG 5 cut(s) 1119, 1366, 3687, 3893, 6466
BstNI CCWGG 6 cut(s) 1590, 1970, 3817, 4757, 5138, 6014
BstPAI GACNNNNGTC 1 cut(s) 2972
BstPI GGTNACC 1 cut(s) 1288
BstSFI CTRYAG 5 cut(s) 230, 2080, 2736, 6090, 6159
BstSLI GKGCMC 3 cut(s) 1499, 4765, 5938
BstSNI TACGTA 2 cut(s) 4293, 6873
BstUI CGCG 3 cut(s) 3068, 4302, 6416
BstX2I RGATCY 6 cut(s) 786, 2106, 3576, 4005, 4402, 5243
BstXI CCANNNNNNTGG 5 cut(s) 1037, 2117, 4692, 4990, 6284
BstYI RGATCY 6 cut(s) 786, 2106, 3576, 4005, 4402, 5243
BstZI CGGCCG 3 cut(s) 1116, 1363, 6463
Bsu15I ATCGAT 3 cut(s) 3040, 3919, 6788
BsuTUI ATCGAT 3 cut(s) 3040, 3919, 6788
BtgI CCRYGG 7 cut(s) 1360, 1503, 2025, 2289, 3681, 4513, 5904
BtgZI GCGATG 1 cut(s) 3838
BtrI CACGTC 2 cut(s) 94, 5632
BtsI GCAGTG 2 cut(s) 2745, 3642
BveI ACCTGC 3 cut(s) 1667, 2404, 4584
CaiI CAGNNNCTG 2 cut(s) 2744, 5740
CciI TCATGA 1 cut(s) 1068
Cfr10I RCCGGY 1 cut(s) 4889
Cfr13I GGNCC 9 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 4198, 5948, 6137
Cfr9I CCCGGG 1 cut(s) 4772
ClaI ATCGAT 3 cut(s) 3040, 3919, 6788
CseI GACGC 8 cut(s) 956, 3921, 4462, 4629, 5585, 5856, 6122, 6442
CspCI CAANNNNNGTGG 8 cut(s) 1120, 1155, 2619, 2654, 4495, 4530, 4770, 4805
DraIII CACNNNGTG 2 cut(s) 1696, 3441
DrdI GACNNNNNNGTC 2 cut(s) 98, 452
DriI GACNNNNNGTC 1 cut(s) 1322
DseDI GACNNNNNNGTC 2 cut(s) 98, 452
EaeI YGGCCR 8 cut(s) 1116, 1363, 1887, 4141, 5139, 5990, 6104, 6463
EagI CGGCCG 3 cut(s) 1116, 1363, 6463
Eam1105I GACNNNNNGTC 1 cut(s) 1322
EciI GGCGGA 1 cut(s) 6752
Ecl136II GAGCTC 2 cut(s) 1099, 2035
EclXI CGGCCG 3 cut(s) 1116, 1363, 6463
Eco105I TACGTA 2 cut(s) 4293, 6873
Eco147I AGGCCT 1 cut(s) 6813
Eco24I GRGCYC 3 cut(s) 1101, 1542, 2037
Eco47I GGWCC 8 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 5948, 6137
Eco47III AGCGCT 2 cut(s) 1629, 5124
Eco52I CGGCCG 3 cut(s) 1116, 1363, 6463
Eco53kI GAGCTC 2 cut(s) 1099, 2035
Eco72I CACGTG 1 cut(s) 2059
Eco88I CYCGRG 6 cut(s) 2579, 3552, 3629, 4562, 4772, 5596
Eco91I GGTNACC 1 cut(s) 1288
EcoICRI GAGCTC 2 cut(s) 1099, 2035
EcoNI CCTNNNNNAGG 4 cut(s) 1593, 5882, 6452, 6610
EcoO109I RGGNCCY 2 cut(s) 1679, 4069
EcoO65I GGTNACC 1 cut(s) 1288
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 6 cut(s) 1588, 1968, 3815, 4755, 5136, 6012
EcoT22I ATGCAT 1 cut(s) 4974
EcoT38I GRGCYC 3 cut(s) 1101, 1542, 2037
Esp3I CGTCTC 2 cut(s) 1837, 2246
FaqI GGGAC 8 cut(s) 448, 548, 1665, 4082, 4709, 5081, 5130, 5471
FauI CCCGC 2 cut(s) 691, 5257
FauNDI CATATG 1 cut(s) 1414
FbaI TGATCA 1 cut(s) 5367
FblI GTMKAC 6 cut(s) 102, 663, 4059, 4527, 4594, 5803
FriOI GRGCYC 3 cut(s) 1101, 1542, 2037
GsaI CCCAGC 2 cut(s) 435, 5102
GsuI CTGGAG 4 cut(s) 1256, 1611, 3357, 4305
HaeII RGCGCY 5 cut(s) 737, 758, 1631, 4896, 5126
HgaI GACGC 8 cut(s) 956, 3921, 4462, 4629, 5585, 5856, 6122, 6442
Hin1I GRCGYC 3 cut(s) 2969, 3807, 4473
HincII GTYRAC 7 cut(s) 70, 103, 706, 1861, 2833, 4652, 5804
HindII GTYRAC 7 cut(s) 70, 103, 706, 1861, 2833, 4652, 5804
HindIII AAGCTT 7 cut(s) 693, 1724, 2647, 2998, 3107, 5765, 6168
Hsp92I GRCGYC 3 cut(s) 2969, 3807, 4473
Kpn2I TCCGGA 1 cut(s) 2272
KpnI GGTACC 1 cut(s) 2261
Ksp22I TGATCA 1 cut(s) 5367
LguI GCTCTTC 4 cut(s) 1530, 1648, 2940, 4177
MbiI CCGCTC 3 cut(s) 5264, 5662, 6589
MfeI CAATTG 1 cut(s) 1137
MflI RGATCY 6 cut(s) 786, 2106, 3576, 4005, 4402, 5243
MlsI TGGCCA 1 cut(s) 4143
MluNI TGGCCA 1 cut(s) 4143
MlyI GAGTC 7 cut(s) 278, 527, 893, 5043, 6330, 6526, 6860
Mox20I TGGCCA 1 cut(s) 4143
Mph1103I ATGCAT 1 cut(s) 4974
MroI TCCGGA 1 cut(s) 2272
MroXI GAANNNNTTC 4 cut(s) 647, 2268, 4316, 6579
MscI TGGCCA 1 cut(s) 4143
Msp20I TGGCCA 1 cut(s) 4143
MspA1I CMGCKG 2 cut(s) 3787, 5740
MspCI CTTAAG 3 cut(s) 1201, 3110, 4028
MunI CAATTG 1 cut(s) 1137
Mva1269I GAATGC 7 cut(s) 200, 965, 1202, 1446, 6422, 6725, 6746
MvaI CCWGG 6 cut(s) 1590, 1970, 3817, 4757, 5138, 6014
MvnI CGCG 3 cut(s) 3068, 4302, 6416
NciI CCSGG 8 cut(s) 673, 1837, 2716, 3837, 4067, 4773, 4774, 5156
NcoI CCATGG 2 cut(s) 2025, 5904
NdeI CATATG 1 cut(s) 1414
NheI GCTAGC 4 cut(s) 1075, 4606, 5125, 5500
NmeAIII GCCGAG 2 cut(s) 4473, 6018
NmuCI GTSAC 9 cut(s) 1511, 3283, 3443, 3640, 4474, 5286, 5533, 5676, 6353
NsiI ATGCAT 1 cut(s) 4974
NspV TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
OliI CACNNNNGTG 1 cut(s) 1502
PaeI GCATGC 4 cut(s) 1870, 4561, 4707, 4976
PaeR7I CTCGAG 2 cut(s) 3552, 5596
PagI TCATGA 1 cut(s) 1068
PceI AGGCCT 1 cut(s) 6813
PciI ACATGT 3 cut(s) 397, 1748, 5545
PciSI GCTCTTC 4 cut(s) 1530, 1648, 2940, 4177
PcsI WCGNNNNNNNCGW 3 cut(s) 99, 3627, 4500
PctI GAATGC 7 cut(s) 200, 965, 1202, 1446, 6422, 6725, 6746
PdmI GAANNNNTTC 4 cut(s) 647, 2268, 4316, 6579
PfeI GAWTC 7 cut(s) 982, 2213, 2642, 3277, 4844, 5426, 5656
PflFI GACNNNGTC 1 cut(s) 5009
PflMI CCANNNNNTGG 1 cut(s) 113
PfoI TCCNGGA 1 cut(s) 4065
PleI GAGTC 7 cut(s) 278, 526, 893, 5043, 6330, 6526, 6860
PmaCI CACGTG 1 cut(s) 2059
PmlI CACGTG 1 cut(s) 2059
PpsI GAGTC 7 cut(s) 278, 526, 893, 5043, 6330, 6526, 6860
Ppu21I YACGTR 5 cut(s) 1463, 2059, 4049, 4293, 6873
PpuMI RGGWCCY 2 cut(s) 1679, 4069
PscI ACATGT 3 cut(s) 397, 1748, 5545
PshAI GACNNNNGTC 1 cut(s) 2972
Psp124BI GAGCTC 2 cut(s) 1101, 2037
Psp5II RGGWCCY 2 cut(s) 1679, 4069
Psp6I CCWGG 6 cut(s) 1588, 1968, 3815, 4755, 5136, 6012
PspCI CACGTG 1 cut(s) 2059
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 2 cut(s) 431, 5098
PspGI CCWGG 6 cut(s) 1588, 1968, 3815, 4755, 5136, 6012
PspPI GGNCC 9 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 4198, 5948, 6137
PspPPI RGGWCCY 2 cut(s) 1679, 4069
PspXI VCTCGAGB 1 cut(s) 5596
PsrI GAACNNNNNNTAC 2 cut(s) 6564, 6596
PstI CTGCAG 2 cut(s) 2740, 6163
PstNI CAGNNNCTG 2 cut(s) 2744, 5740
PsuI RGATCY 6 cut(s) 786, 2106, 3576, 4005, 4402, 5243
PsyI GACNNNGTC 1 cut(s) 5009
PvuII CAGCTG 1 cut(s) 3787
SacI GAGCTC 2 cut(s) 1101, 2037
SalI GTCGAC 2 cut(s) 101, 5802
SapI GCTCTTC 4 cut(s) 1530, 1648, 2940, 4177
Sau96I GGNCC 9 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 4198, 5948, 6137
ScaI AGTACT 2 cut(s) 1469, 5706
SchI GAGTC 7 cut(s) 278, 527, 893, 5043, 6330, 6526, 6860
SfcI CTRYAG 5 cut(s) 230, 2080, 2736, 6090, 6159
Sfr274I CTCGAG 2 cut(s) 3552, 5596
SfuI TTCGAA 4 cut(s) 2496, 3253, 4419, 5526
SgrAI CRCCGGYG 1 cut(s) 4889
SgrDI CGTCGACG 1 cut(s) 5802
SinI GGWCC 8 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 5948, 6137
SlaI CTCGAG 2 cut(s) 3552, 5596
SmaI CCCGGG 1 cut(s) 4774
SnaBI TACGTA 2 cut(s) 4293, 6873
SphI GCATGC 4 cut(s) 1870, 4561, 4707, 4976
SseBI AGGCCT 1 cut(s) 6813
SspI AATATT 2 cut(s) 112, 4736
SstI GAGCTC 2 cut(s) 1101, 2037
StuI AGGCCT 1 cut(s) 6813
TaqII GACCGA 5 cut(s) 2449, 2684, 2962, 3466, 3907
TatI WGTACW 5 cut(s) 294, 1467, 3758, 3798, 5704
TauI GCSGC 3 cut(s) 62, 1121, 5740
TfiI GAWTC 7 cut(s) 982, 2213, 2642, 3277, 4844, 5426, 5656
TseFI GTSAC 9 cut(s) 1511, 3283, 3443, 3640, 4474, 5286, 5533, 5676, 6353
Tsp45I GTSAC 9 cut(s) 1511, 3283, 3443, 3640, 4474, 5286, 5533, 5676, 6353
TspGWI ACGGA 7 cut(s) 43, 277, 2543, 2841, 5256, 5775, 6330
TspMI CCCGGG 1 cut(s) 4772
Tth111I GACNNNGTC 1 cut(s) 5009
Van91I CCANNNNNTGG 1 cut(s) 113
Vha464I CTTAAG 3 cut(s) 1201, 3110, 4028
VneI GTGCAC 1 cut(s) 1495
VpaK11BI GGWCC 8 cut(s) 535, 1679, 2432, 2667, 3819, 4069, 5948, 6137
XagI CCTNNNNNAGG 4 cut(s) 1593, 5882, 6452, 6610
XapI RAATTY 7 cut(s) 359, 551, 2153, 3405, 4188, 4487, 6600
XcmI CCANNNNNNNNNTGG 2 cut(s) 2239, 6337
XhoI CTCGAG 2 cut(s) 3552, 5596
XmaI CCCGGG 1 cut(s) 4772
XmaJI CCTAGG 2 cut(s) 998, 5878
XmiI GTMKAC 6 cut(s) 102, 663, 4059, 4527, 4594, 5803
XmnI GAANNNNTTC 4 cut(s) 647, 2268, 4316, 6579
ZraI GACGTC 2 cut(s) 2970, 3808
ZrmI AGTACT 2 cut(s) 1469, 5706
Zsp2I ATGCAT 1 cut(s) 4974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.