pycom17g27310
ERF Family

Transducin WD40 repeat-like superfamily protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
25559784 .. 25561403
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g27310.1

Sequence Viewer

Length: 1008 bp
ATGAGCCATTCAAGCTCCAGAATTTCAGTGCTTAATCGCATTGGTAGTCAAGACCGAACCTCTGTCTTCAAGAGGCTTAACACGCCAACATCCCAAAGCTCTGTTTTTGAAAGGTTGTTAAAGCCTAAGAAACAAAGCAACACAGCTATCTCTCCTCTGCGACGATCAGCTTCGGAAAGATTTGAAGATAATGAGAAGCCTTTTGGAAAGAGGAAGACAACACCAAAGGAAGAAAAGTTCGATGGGTTAGCAGAAAAAGGCGACGTTCGAAGCTTGATTCCTTCAAGGATGAAGCGCCAAGCAATCCTAGAGGTCGACACAAAAGGACCACTGAAGGTAAGGAGGCACATCATCGTCCACACTGGCAAATCTTCATGCCAACAAACCCAAGAGAACGGCACTGAAGATGAAATCCCTAAGAAAGATGTCACTTCTGGCTCTTTCGACTCAAAGTCTTCACCTCGACTGTTGGGGGCATGCTCCAAGTCAAGTGAAATTGAAGGATGGACTCATGTCACTCCGAAGAAACTGCACGAGAAACATATGTCTTCTCCACAAGTGCACCAATCAGAAAGGAGGGAAAGCAGCTTTCGCCAACCTCCAAAGCAATGTGAAAATGTTGAAGATAAGAAAATTTCAACACAAAGATCGTTCATGCGGGATCTTTTCTTCCTCGAAGACTTATTCAATTTCTCGATCAAGGCTCCTTGCTATGAAGATTGTGAGGAATGCATTTCGAAGATCGCTTCGAAGAAATTGGACAAGCAACAACCATCTTGTCCACAAGTTTATCAGTCGAAAAGGGGGCAAAACAGCTCTTGTCAACCTCCAGAACAATGTGAAAGTGTTGGAGATAATAAAATTTCGACACAAAAATCGTCCATCCCCATCACAATGTTCGACCTCTTCCCAGAAGACTTCTTCAATTACTTGGCCAAGGCTCCTTCCTATGAAGATTGCGAGGAACGCCTCTCCCAAGATCGATCGTTGAGGATGATGAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

336

Amino Acids

38.3

Weight (kDa)

9.18

Isoelectric Point (pI)

71.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 315
AciI CCGC 1 cut(s) 658
AclWI GGATC 1 cut(s) 669
AcoI YGGCCR 1 cut(s) 933
AcsI RAATTY 3 cut(s) 21, 633, 861
AcuI CTGAAG 2 cut(s) 353, 423
AhdI GACNNNNNGTC 1 cut(s) 451
AloI GAACNNNNNNTCC 2 cut(s) 221, 253
AluBI AGCT 7 cut(s) 15, 99, 146, 170, 273, 588, 816
AluI AGCT 7 cut(s) 15, 99, 146, 170, 273, 588, 816
Alw21I GWGCWC 1 cut(s) 564
Alw44I GTGCAC 1 cut(s) 560
AlwI GGATC 1 cut(s) 669
AoxI GGCC 1 cut(s) 933
ApaLI GTGCAC 1 cut(s) 560
ApeKI GCWGC 1 cut(s) 585
ApoI RAATTY 3 cut(s) 21, 633, 861
AspLEI GCGC 1 cut(s) 297
AspS9I GGNCC 1 cut(s) 326
AsuHPI GGTGA 1 cut(s) 450
AsuII TTCGAA 3 cut(s) 268, 737, 749
AvaII GGWCC 1 cut(s) 326
BaeGI GKGCMC 1 cut(s) 564
BalI TGGCCA 1 cut(s) 935
BauI CACGAG 1 cut(s) 533
BbsI GAAGAC 6 cut(s) 58, 221, 447, 540, 684, 921
Bbv12I GWGCWC 1 cut(s) 564
BbvI GCAGC 1 cut(s) 597
BccI CCATC 5 cut(s) 236, 498, 781, 890, 896
BceAI ACGGC 1 cut(s) 412
BcgI CGANNNNNNTGC 2 cut(s) 511, 545
BfaI CTAG 1 cut(s) 308
BfoI RGCGCY 1 cut(s) 298
BisI GCNGC 1 cut(s) 586
BlsI GCNGC 1 cut(s) 587
Bme18I GGWCC 1 cut(s) 326
BmeRI GACNNNNNGTC 1 cut(s) 451
BmgT120I GGNCC 1 cut(s) 326
BmiI GGNNCC 2 cut(s) 705, 942
BoxI GACNNNNGTC 1 cut(s) 512
BpiI GAAGAC 6 cut(s) 58, 221, 447, 540, 684, 921
BpmI CTGGAG 1 cut(s) 813
Bpu14I TTCGAA 3 cut(s) 268, 737, 749
Bsa29I ATCGAT 1 cut(s) 982
BsaJI CCNNGG 1 cut(s) 936
Bse1I ACTGG 1 cut(s) 367
Bse3DI GCAATG 1 cut(s) 614
BseCI ATCGAT 1 cut(s) 982
BseDI CCNNGG 1 cut(s) 936
BseGI GGATG 5 cut(s) 89, 294, 509, 882, 999
BseMI GCAATG 1 cut(s) 614
BseNI ACTGG 1 cut(s) 367
BseRI GAGGAG 1 cut(s) 144
BseSI GKGCMC 1 cut(s) 564
BseXI GCAGC 1 cut(s) 597
BsgI GTGCAG 1 cut(s) 515
Bsh1285I CGRYCG 1 cut(s) 986
BshFI GGCC 1 cut(s) 935
BshVI ATCGAT 1 cut(s) 982
BsiEI CGRYCG 1 cut(s) 986
BsiHKAI GWGCWC 1 cut(s) 564
BsmI GAATGC 1 cut(s) 734
BsnI GGCC 1 cut(s) 935
Bsp119I TTCGAA 3 cut(s) 268, 737, 749
Bsp1286I GDGCHC 1 cut(s) 564
Bsp143I GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
BspACI CCGC 1 cut(s) 658
BspANI GGCC 1 cut(s) 935
BspDI ATCGAT 1 cut(s) 982
BspLI GGNNCC 2 cut(s) 705, 942
BspPI GGATC 1 cut(s) 669
BspT104I TTCGAA 3 cut(s) 268, 737, 749
BsrDI GCAATG 1 cut(s) 614
BsrI ACTGG 1 cut(s) 367
BssECI CCNNGG 1 cut(s) 936
BssMI GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
BssSI CACGAG 1 cut(s) 533
BssT1I CCWWGG 1 cut(s) 936
Bst2BI CACGAG 1 cut(s) 533
Bst4CI ACNGT 1 cut(s) 468
Bst6I CTCTTC 1 cut(s) 911
BstBI TTCGAA 3 cut(s) 268, 737, 749
BstC8I GCNNGC 1 cut(s) 478
BstDEI CTNAG 2 cut(s) 126, 417
BstF5I GGATG 5 cut(s) 89, 294, 509, 882, 999
BstH2I RGCGCY 1 cut(s) 298
BstHHI GCGC 1 cut(s) 297
BstKTI GATC 7 cut(s) 167, 650, 664, 699, 744, 982, 986
BstMBI GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
BstMCI CGRYCG 1 cut(s) 986
BstMWI GCNNNNNNNGC 4 cut(s) 12, 82, 591, 966
BstNSI RCATGY 1 cut(s) 480
BstPAI GACNNNNGTC 1 cut(s) 512
BstSLI GKGCMC 1 cut(s) 564
BstV1I GCAGC 1 cut(s) 597
BstV2I GAAGAC 6 cut(s) 58, 221, 447, 540, 684, 921
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
Bsu15I ATCGAT 1 cut(s) 982
BsuRI GGCC 1 cut(s) 935
BsuTUI ATCGAT 1 cut(s) 982
BtsCI GGATG 5 cut(s) 89, 294, 509, 882, 999
BtsIMutI CAGTG 4 cut(s) 33, 329, 360, 399
Cac8I GCNNGC 1 cut(s) 478
CfoI GCGC 1 cut(s) 297
Cfr13I GGNCC 1 cut(s) 326
ClaI ATCGAT 1 cut(s) 982
CviAII CATG 4 cut(s) 375, 477, 512, 655
DdeI CTNAG 2 cut(s) 126, 417
DpnI GATC 7 cut(s) 166, 649, 663, 698, 743, 981, 985
DpnII GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
DriI GACNNNNNGTC 1 cut(s) 451
EaeI YGGCCR 1 cut(s) 933
Eam1104I CTCTTC 1 cut(s) 911
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 1 cut(s) 911
Eco130I CCWWGG 1 cut(s) 936
Eco47I GGWCC 1 cut(s) 326
Eco57I CTGAAG 2 cut(s) 353, 423
EcoT14I CCWWGG 1 cut(s) 936
EcoT22I ATGCAT 1 cut(s) 734
ErhI CCWWGG 1 cut(s) 936
FaeI CATG 4 cut(s) 378, 480, 515, 658
FaiI YATR 9 cut(s) 376, 478, 513, 543, 545, 656, 714, 951, 1006
FatI CATG 4 cut(s) 374, 476, 511, 654
FauI CCCGC 1 cut(s) 651
FauNDI CATATG 1 cut(s) 543
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 1 cut(s) 586
FokI GGATG 4 cut(s) 76, 301, 516, 869
Fsp4HI GCNGC 1 cut(s) 586
FspBI CTAG 1 cut(s) 308
GlaI GCGC 1 cut(s) 296
GluI GCNGC 1 cut(s) 586
GsuI CTGGAG 1 cut(s) 813
HaeII RGCGCY 1 cut(s) 298
HaeIII GGCC 1 cut(s) 935
HhaI GCGC 1 cut(s) 297
Hin1II CATG 4 cut(s) 378, 480, 515, 658
Hin6I GCGC 1 cut(s) 295
HinP1I GCGC 1 cut(s) 295
HincII GTYRAC 2 cut(s) 316, 824
HindII GTYRAC 2 cut(s) 316, 824
HindIII AAGCTT 1 cut(s) 271
HinfI GANTC 3 cut(s) 277, 446, 508
HphI GGTGA 1 cut(s) 450
Hpy166II GTNNAC 5 cut(s) 316, 358, 562, 782, 824
Hpy188I TCNGA 3 cut(s) 175, 522, 571
Hpy188III TCNNGA 5 cut(s) 18, 50, 70, 694, 830
Hpy8I GTNNAC 5 cut(s) 316, 358, 562, 782, 824
Hpy99I CGWCG 2 cut(s) 165, 266
HpyAV CCTTC 4 cut(s) 291, 328, 494, 954
HpyCH4III ACNGT 1 cut(s) 468
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 3 cut(s) 532, 562, 732
HpyF10VI GCNNNNNNNGC 4 cut(s) 12, 82, 591, 966
HpyF3I CTNAG 2 cut(s) 126, 417
HpySE526I ACGT 1 cut(s) 264
Hsp92II CATG 4 cut(s) 378, 480, 515, 658
HspAI GCGC 1 cut(s) 295
Kzo9I GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
LmnI GCTCC 4 cut(s) 20, 485, 709, 946
LpnPI CCDG 5 cut(s) 31, 348, 420, 843, 924
Lsp1109I GCAGC 1 cut(s) 597
MaeI CTAG 1 cut(s) 308
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 2 cut(s) 427, 514
MalI GATC 7 cut(s) 166, 649, 663, 698, 743, 981, 985
MboI GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 1 cut(s) 564
MlsI TGGCCA 1 cut(s) 935
MluCI AATT 8 cut(s) 21, 495, 633, 688, 755, 861, 925, 1001
MluNI TGGCCA 1 cut(s) 935
MlyI GAGTC 2 cut(s) 440, 502
MmeI TCCRAC 1 cut(s) 829
Mox20I TGGCCA 1 cut(s) 935
Mph1103I ATGCAT 1 cut(s) 734
MscI TGGCCA 1 cut(s) 935
MseI TTAA 3 cut(s) 33, 78, 119
MslI CAYNNNNRTG 1 cut(s) 893
Msp20I TGGCCA 1 cut(s) 935
Mva1269I GAATGC 1 cut(s) 734
MwoI GCNNNNNNNGC 4 cut(s) 12, 82, 591, 966
NdeI CATATG 1 cut(s) 543
NdeII GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
NlaIII CATG 4 cut(s) 378, 480, 515, 658
NlaIV GGNNCC 2 cut(s) 705, 942
NmuCI GTSAC 2 cut(s) 427, 514
NsiI ATGCAT 1 cut(s) 734
NspI RCATGY 1 cut(s) 480
NspV TTCGAA 3 cut(s) 268, 737, 749
PaeI GCATGC 1 cut(s) 480
PctI GAATGC 1 cut(s) 734
PfeI GAWTC 1 cut(s) 277
PkrI GCNGC 1 cut(s) 587
Ple19I CGATCG 1 cut(s) 986
PleI GAGTC 2 cut(s) 440, 502
PpsI GAGTC 2 cut(s) 440, 502
PshAI GACNNNNGTC 1 cut(s) 512
PspN4I GGNNCC 2 cut(s) 705, 942
PspPI GGNCC 1 cut(s) 326
PsuI RGATCY 1 cut(s) 661
PvuI CGATCG 1 cut(s) 986
RseI CAYNNNNRTG 1 cut(s) 893
SalI GTCGAC 1 cut(s) 314
SaqAI TTAA 3 cut(s) 33, 78, 119
SatI GCNGC 1 cut(s) 586
Sau3AI GATC 7 cut(s) 164, 647, 661, 696, 741, 979, 983
Sau96I GGNCC 1 cut(s) 326
SchI GAGTC 2 cut(s) 440, 502
SduI GDGCHC 1 cut(s) 564
SfuI TTCGAA 3 cut(s) 268, 737, 749
SinI GGWCC 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 893
SphI GCATGC 1 cut(s) 480
Sse9I AATT 8 cut(s) 21, 495, 633, 688, 755, 861, 925, 1001
SsiI CCGC 1 cut(s) 658
SspMI CTAG 1 cut(s) 308
StyI CCWWGG 1 cut(s) 936
TaaI ACNGT 1 cut(s) 468
TaiI ACGT 1 cut(s) 267
TaqII GACCGA 1 cut(s) 69
TasI AATT 8 cut(s) 21, 495, 633, 688, 755, 861, 925, 1001
TfiI GAWTC 1 cut(s) 277
Tru1I TTAA 3 cut(s) 33, 78, 119
Tru9I TTAA 3 cut(s) 33, 78, 119
TscAI CASTG 4 cut(s) 33, 336, 367, 406
TseFI GTSAC 2 cut(s) 427, 514
TseI GCWGC 1 cut(s) 585
Tsp45I GTSAC 2 cut(s) 427, 514
TspDTI ATGAA 6 cut(s) 305, 363, 423, 643, 729, 966
TspRI CASTG 4 cut(s) 33, 336, 367, 406
VneI GTGCAC 1 cut(s) 560
VpaK11BI GGWCC 1 cut(s) 326
XapI RAATTY 3 cut(s) 21, 633, 861
XceI RCATGY 1 cut(s) 480
XmiI GTMKAC 1 cut(s) 315
XspI CTAG 1 cut(s) 308
Zsp2I ATGCAT 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.