pycom03g18810

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000128
Physical Location & Seq
Forward (+)
19670993 .. 19679282
8290 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g18810.10

Sequence Viewer

Length: 2784 bp
ATGACAAAGCATACACATTTCAAGTTTAAAATGGTATTAAGTGGGAAATTAGGCCATAAGTTACACCACTTCAATTTCAATATTGCATTAAGTGGGAAATTAGGCCATAAGTTACACCACTTCAATTTCAATATTGCATTAAGTGGGAAAATTAGGCAATGGTGCTTGGAAAGGAAAAAAATATTTTGTGGTGGTGATTCATTCTCAAAGCCTATAAATAGGCTTCTCCATCAAGGTATCAACTTTGAAACTCTAAAGCTTTCAACATCCATTGGTGCCACAACCACTTCTCAACATGCCGCTGCAAAGTTGGTACTGCTAAGCAAGCAAGAGCAGCATCAAAGGCGCGAGTCGGTCATCCACCTGACCTTGATGGGGGCACCAAAGCATGCTATTGAGGCACACAAGATGACACCCCAAAATGGCCAATGGGGTGCTTCATCAGCACTATGGATGTCTGAAGGAAAGTCATGTCTATTGGTTGCACAAGTCATGACCATCGGCGTCACCTCTGTTGAAGAACAACTGGCTCAAATGAGCAAAGCAATTGCAAAGCTTACACAGACTGAGCCTCCAGTGGAGAAAGTCGAAGAGAAGCTGAAGCTAGACCAAGCAACGGCGTTCATGGAATCTCTCTCTATCCAGCAGCTACAGGAGATGATCGCAAGCACTGTCAAGACACAGTACGAAGGAAGCTCGCATGACTCCGTACTGTACTCAAAGCCTTACTCCAAGAAGATTGATGCTTTGAAGATGCCAAGGGGTTATCAGCCCCCAAAATTCATGCAGTTCGATGGAAAAGGCAACCCGAAGCAACATGTCGCCCATTTCATTGAAACTTGCAACAATGCTGGGACAGAGGGAGACTACCTTGTCAAACAGTTCGTACGTTCGCTGAAAAGTAATGCTTTTGACTGGTACACCGACCTCGAACCCGAGTCTATCAACAGTTGGGACCAGCTAGAAAGGGAATTCCTCAACCGTTTCTACAGCACTCGTCGTACTGTAAGCATGCTAGAGCTGACCAGTACGAAACAGTGGAGAGATGAACCTGTCATCAACTACATAAATAGATGGCGCTCCTTAAGTCTGGATTGTAAAGATCGGCTTTCTGAAACCTCTGCCATTGAGATGTGCGTTCAAGGCATGCAGTGGGGACTACACTACATCCTTCAAGGCATCAAACCACGAACATTTGAGGAGTTAGCCACCCGCGCCCATGATATGGAGTTAAGCATCACCCGTCATGGGAAGAAAGAACAGATCGCCGACTACAAGAATGACAAAGTTTTGGGGCCAAAGGTGGATAAGGCTGCGTGGAAACCCACCAAGGAAGCAATGACGGTCAACACAACTCCAGTCAAAACCCATACACGAGGCAAGGCGATTCAAACCGAAGCTTTTCGTGATCAAGAGATACGTAGACGCACTTTGAAGGAGCTTGAGGAGAAGACTTATCCATTCCCCGACTCTGACGTGATTGCCATGTTGAAAGACTTGCTTGACAAAAAGGTGATCAACCTACCTGAGTGCAAACGGCCGGAAGAGATGAACCGTACTGACAGTCCAAGGTACTGTGGATTCCACCGCTTCATTGGTCATCCGACGGAAAAGTGCTTTGTGCTAAAAGATCTCATCATGAAGTTGGCTCAGAAAGGGATCATCGAGCTAGATCTTAATGATGTGGTGAAGTCAAACTATACCACCGTCACTTCTGGCTCTTTGAACTCAAAATCTTCACCTCAACCGCTGGGGGCATGCTCCAAAACCATGTCAGTCACGTCAAGTGAAGTTGAAGGATGGACTCATGTCACTCCGAAGAAAATGCACAAGAAACATAGGTCTCCTCCACAAGTTCACCAATCGGAAAGGGGGCAAAGCAGCTACCGTCAACCTTCAAAGCTACATGAAAGTGTTGAGGATGAGGAAGTTATGACACAAAGATCGTCCGTTGCCATCACAATGCGCGATTTCTTCCCCAAAGACTTCTTCAATCACTCGTTCCATTCAACTTTCAAGCAAATTCCGAAGGATCAAGAAAGCTCTCTTCGTTCTTCGTTAAATCCTCTTTCAAGATCAAGCCCCGACGCCCCCAACGGCCCTTTGGATCAACAACCTCAACAAATCCACACATCCAATCGTTCTTCAAGATTAAGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACCTTCAAGATCAAGCCCAAAAGCCCTTGAAGAAATCCACACAACCATTATTCAAGATCAAGCCCCGACGGCCCTTGAAGAAAGTCAACAACCTCAACAAATCCACACATCCAATCGTTCTTCAAGATTAAGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACCTTCAAGATCAAGCCCAAAAGCCCTTGAAGAAATCCACACAACCATTATTCAAGATCAAGCCCCGACGGCCCTTGAAGAAAGTCAACAACCTCAACAAATCCACACATCCAATCGTTCTTCAAGATTAAGCCCAAAAACCCTTGAAGATCCGCTCATCCATCAACCTTTAAGATCAAGCCCAAAAGCCCTTGAAGAAATCCACACAACCATTATTCAAGATCAAGCCCCGACGGCCCTTGAAGAAAGTGTTCATCCGTTCATCAACTGTTCATCCTTAGATCAAGCCCCGACGCAGAGGACCAAATTTGAGAGAGATCGTAACCCCAAAATCATAAACACAAAAATATTATTTTGTACACGTTTATTCTGGTTTCTTGTTTCAAGGAATCTTTCGTGTTCACAGAAACTTATCATTTCTGATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

928

Amino Acids

105.49

Weight (kDa)

9.16

Isoelectric Point (pI)

58.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 872
AccB1I GGYRCC 2 cut(s) 275, 379
AccB7I CCANNNNNTGG 1 cut(s) 1225
AccBSI CCGCTC 3 cut(s) 2179, 2344, 2509
AccI GTMKAC 1 cut(s) 1423
AccII CGCG 3 cut(s) 348, 1215, 1968
AciI CCGC 7 cut(s) 300, 1213, 1588, 1748, 2177, 2342, 2507
AclWI GGATC 6 cut(s) 1667, 2040, 2115, 2168, 2333, 2498
AcoI YGGCCR 2 cut(s) 424, 1538
AcsI RAATTY 4 cut(s) 779, 971, 2022, 2660
AcuI CTGAAG 2 cut(s) 480, 620
AcyI GRCGYC 2 cut(s) 504, 2088
AfiI CCNNNNNNNGG 5 cut(s) 375, 422, 616, 1225, 1248
AflII CTTAAG 1 cut(s) 1084
AflIII ACRYGT 2 cut(s) 817, 2714
AjiI CACGTC 2 cut(s) 1477, 1782
AjuI GAANNNNNNNTTGG 2 cut(s) 1973, 2005
Alw26I GTCTC 2 cut(s) 858, 1848
AlwI GGATC 6 cut(s) 1667, 2040, 2115, 2168, 2333, 2498
Ama87I CYCGRG 1 cut(s) 935
AoxI GGCC 9 cut(s) 52, 103, 424, 1295, 1538, 2098, 2259, 2424, 2589
ApeKI GCWGC 5 cut(s) 302, 334, 646, 1313, 1881
ApoI RAATTY 4 cut(s) 779, 971, 2022, 2660
Asp700I GAANNNNTTC 2 cut(s) 1401, 2604
AspLEI GCGC 4 cut(s) 348, 1080, 1217, 1968
AspS9I GGNCC 7 cut(s) 955, 1295, 2099, 2260, 2425, 2590, 2655
AsuHPI GGTGA 7 cut(s) 206, 499, 1231, 1525, 1699, 1731, 1850
AvaI CYCGRG 1 cut(s) 935
AvaII GGWCC 2 cut(s) 955, 2655
BaeGI GKGCMC 1 cut(s) 382
BalI TGGCCA 1 cut(s) 426
BanI GGYRCC 2 cut(s) 275, 379
BauI CACGAG 1 cut(s) 1374
BbsI GAAGAC 1 cut(s) 1457
BbvI GCAGC 5 cut(s) 289, 346, 658, 1300, 1893
BceAI ACGGC 6 cut(s) 633, 1553, 2113, 2274, 2439, 2604
BcgI CGANNNNNNTGC 2 cut(s) 1807, 1841
BclI TGATCA 2 cut(s) 1408, 1515
BcoDI GTCTC 2 cut(s) 858, 1848
BfaI CTAG 4 cut(s) 605, 962, 1016, 1670
BfmI CTRYAG 2 cut(s) 650, 988
BfoI RGCGCY 1 cut(s) 1081
BfrI CTTAAG 1 cut(s) 1084
BglI GCCNNNNNGGC 3 cut(s) 2258, 2423, 2588
BglII AGATCT 2 cut(s) 1630, 1672
BisI GCNGC 6 cut(s) 300, 303, 335, 647, 1314, 1882
BlpI GCTNAGC 1 cut(s) 320
BlsI GCNGC 6 cut(s) 301, 304, 336, 648, 1315, 1883
Bme18I GGWCC 2 cut(s) 955, 2655
BmeT110I CYCGRG 1 cut(s) 935
BmgBI CACGTC 2 cut(s) 1477, 1782
BmgT120I GGNCC 7 cut(s) 955, 1295, 2099, 2260, 2425, 2590, 2655
BmiI GGNNCC 4 cut(s) 277, 381, 956, 1296
BmsI GCATC 6 cut(s) 346, 733, 744, 1188, 1245, 2767
BoxI GACNNNNGTC 1 cut(s) 1808
BpiI GAAGAC 1 cut(s) 1457
BpmI CTGGAG 2 cut(s) 558, 1341
Bpu1102I GCTNAGC 1 cut(s) 320
BpuEI CTTGAG 1 cut(s) 1463
BsaAI YACGTR 1 cut(s) 1421
BsaHI GRCGYC 2 cut(s) 504, 2088
BsaI GGTCTC 1 cut(s) 1848
BsaJI CCNNGG 3 cut(s) 758, 1329, 1568
BsaXI ACNNNNNCTCC 2 cut(s) 556, 586
Bsc4I CCNNNNNNNGG 5 cut(s) 375, 422, 616, 1225, 1248
Bse1I ACTGG 5 cut(s) 531, 575, 920, 1026, 1358
Bse3DI GCAATG 2 cut(s) 164, 1344
BseDI CCNNGG 3 cut(s) 758, 1329, 1568
BseLI CCNNNNNNNGG 5 cut(s) 375, 422, 616, 1225, 1248
BseMI GCAATG 2 cut(s) 164, 1344
BseMII CTCAG 3 cut(s) 558, 1518, 1664
BseNI ACTGG 5 cut(s) 531, 575, 920, 1026, 1358
BseRI GAGGAG 3 cut(s) 1214, 1460, 1836
BseSI GKGCMC 1 cut(s) 382
BseX3I CGGCCG 1 cut(s) 1538
BseXI GCAGC 5 cut(s) 289, 346, 658, 1300, 1893
BseYI CCCAGC 2 cut(s) 851, 1750
Bsh1236I CGCG 3 cut(s) 348, 1215, 1968
Bsh1285I CGRYCG 1 cut(s) 1541
BshFI GGCC 9 cut(s) 54, 105, 426, 1297, 1540, 2100, 2261, 2426, 2591
BshNI GGYRCC 2 cut(s) 275, 379
BsiEI CGRYCG 1 cut(s) 1541
BsiHKCI CYCGRG 1 cut(s) 935
BsiSI CCGG 1 cut(s) 1541
BsiWI CGTACG 1 cut(s) 886
BslFI GGGAC 3 cut(s) 868, 968, 1170
BslI CCNNNNNNNGG 5 cut(s) 375, 422, 616, 1225, 1248
BsmAI GTCTC 2 cut(s) 858, 1848
BsmFI GGGAC 3 cut(s) 868, 968, 1170
BsnI GGCC 9 cut(s) 54, 105, 426, 1297, 1540, 2100, 2261, 2426, 2591
Bso31I GGTCTC 1 cut(s) 1848
BsoBI CYCGRG 1 cut(s) 935
Bsp1286I GDGCHC 1 cut(s) 382
Bsp1407I TGTACA 1 cut(s) 2711
Bsp1720I GCTNAGC 1 cut(s) 320
BspACI CCGC 7 cut(s) 300, 1213, 1588, 1748, 2177, 2342, 2507
BspANI GGCC 9 cut(s) 54, 105, 426, 1297, 1540, 2100, 2261, 2426, 2591
BspCNI CTCAG 3 cut(s) 559, 1519, 1663
BspFNI CGCG 3 cut(s) 348, 1215, 1968
BspHI TCATGA 2 cut(s) 492, 1638
BspLI GGNNCC 4 cut(s) 277, 381, 956, 1296
BspPI GGATC 6 cut(s) 1667, 2040, 2115, 2168, 2333, 2498
BspT107I GGYRCC 2 cut(s) 275, 379
BspTI CTTAAG 1 cut(s) 1084
BspTNI GGTCTC 1 cut(s) 1848
BsrBI CCGCTC 3 cut(s) 2179, 2344, 2509
BsrDI GCAATG 2 cut(s) 164, 1344
BsrGI TGTACA 1 cut(s) 2711
BsrI ACTGG 5 cut(s) 531, 575, 920, 1026, 1358
BssECI CCNNGG 3 cut(s) 758, 1329, 1568
BssNI GRCGYC 2 cut(s) 504, 2088
BssSI CACGAG 1 cut(s) 1374
BssT1I CCWWGG 3 cut(s) 758, 1329, 1568
Bst2BI CACGAG 1 cut(s) 1374
Bst6I CTCTTC 3 cut(s) 585, 1539, 2052
BstACI GRCGYC 2 cut(s) 504, 2088
BstAFI CTTAAG 1 cut(s) 1084
BstAUI TGTACA 1 cut(s) 2711
BstBAI YACGTR 1 cut(s) 1421
BstC8I GCNNGC 7 cut(s) 326, 390, 667, 698, 1013, 1148, 1759
BstDEI CTNAG 5 cut(s) 320, 567, 1527, 1650, 2632
BstFNI CGCG 3 cut(s) 348, 1215, 1968
BstH2I RGCGCY 1 cut(s) 1081
BstHHI GCGC 4 cut(s) 348, 1080, 1217, 1968
BstMAI GTCTC 2 cut(s) 858, 1848
BstMCI CGRYCG 1 cut(s) 1541
BstNSI RCATGY 6 cut(s) 299, 392, 821, 1015, 1150, 1761
BstPAI GACNNNNGTC 1 cut(s) 1808
BstSFI CTRYAG 2 cut(s) 650, 988
BstSLI GKGCMC 1 cut(s) 382
BstSNI TACGTA 1 cut(s) 1421
BstUI CGCG 3 cut(s) 348, 1215, 1968
BstV1I GCAGC 5 cut(s) 289, 346, 658, 1300, 1893
BstV2I GAAGAC 1 cut(s) 1457
BstX2I RGATCY 5 cut(s) 1630, 1672, 2173, 2338, 2503
BstYI RGATCY 5 cut(s) 1630, 1672, 2173, 2338, 2503
BstZI CGGCCG 1 cut(s) 1538
BsuRI GGCC 9 cut(s) 54, 105, 426, 1297, 1540, 2100, 2261, 2426, 2591
BtrI CACGTC 2 cut(s) 1477, 1782
BtsI GCAGTG 1 cut(s) 1157
BtsIMutI CAGTG 4 cut(s) 582, 669, 1043, 1157
Cac8I GCNNGC 7 cut(s) 326, 390, 667, 698, 1013, 1148, 1759
CciI TCATGA 2 cut(s) 492, 1638
CfoI GCGC 4 cut(s) 348, 1080, 1217, 1968
Cfr13I GGNCC 7 cut(s) 955, 1295, 2099, 2260, 2425, 2590, 2655
CseI GACGC 4 cut(s) 493, 1434, 2096, 2656
DdeI CTNAG 5 cut(s) 320, 567, 1527, 1650, 2632
DraI TTTAAA 1 cut(s) 28
DrdI GACNNNNNNGTC 1 cut(s) 872
DseDI GACNNNNNNGTC 1 cut(s) 872
EaeI YGGCCR 2 cut(s) 424, 1538
EagI CGGCCG 1 cut(s) 1538
Eam1104I CTCTTC 3 cut(s) 585, 1539, 2052
EarI CTCTTC 3 cut(s) 585, 1539, 2052
EclXI CGGCCG 1 cut(s) 1538
Eco105I TACGTA 1 cut(s) 1421
Eco130I CCWWGG 3 cut(s) 758, 1329, 1568
Eco31I GGTCTC 1 cut(s) 1848
Eco47I GGWCC 2 cut(s) 955, 2655
Eco52I CGGCCG 1 cut(s) 1538
Eco57I CTGAAG 2 cut(s) 480, 620
Eco88I CYCGRG 1 cut(s) 935
EcoRI GAATTC 1 cut(s) 971
EcoT14I CCWWGG 3 cut(s) 758, 1329, 1568
EcoT22I ATGCAT 1 cut(s) 2782
ErhI CCWWGG 3 cut(s) 758, 1329, 1568
FalI AAGNNNNNCTT 6 cut(s) 892, 924, 1092, 1124, 1485, 1517
FaqI GGGAC 3 cut(s) 868, 968, 1170
FauI CCCGC 1 cut(s) 1220
FbaI TGATCA 2 cut(s) 1408, 1515
FblI GTMKAC 1 cut(s) 1423
Fnu4HI GCNGC 6 cut(s) 300, 303, 335, 647, 1314, 1882
Fsp4HI GCNGC 6 cut(s) 300, 303, 335, 647, 1314, 1882
FspBI CTAG 4 cut(s) 605, 962, 1016, 1670
GlaI GCGC 4 cut(s) 347, 1079, 1216, 1967
GluI GCNGC 6 cut(s) 300, 303, 335, 647, 1314, 1882
GsaI CCCAGC 2 cut(s) 855, 1754
GsuI CTGGAG 2 cut(s) 558, 1341
HaeII RGCGCY 1 cut(s) 1081
HaeIII GGCC 9 cut(s) 54, 105, 426, 1297, 1540, 2100, 2261, 2426, 2591
HapII CCGG 1 cut(s) 1541
HgaI GACGC 4 cut(s) 493, 1434, 2096, 2656
HhaI GCGC 4 cut(s) 348, 1080, 1217, 1968
Hin1I GRCGYC 2 cut(s) 504, 2088
Hin6I GCGC 4 cut(s) 346, 1078, 1215, 1966
HinP1I GCGC 4 cut(s) 346, 1078, 1215, 1966
HincII GTYRAC 4 cut(s) 1348, 1892, 2276, 2441
HindII GTYRAC 4 cut(s) 1348, 1892, 2276, 2441
HindIII AAGCTT 3 cut(s) 257, 554, 1398
HpaII CCGG 1 cut(s) 1541
HphI GGTGA 7 cut(s) 206, 499, 1231, 1525, 1699, 1731, 1850
Hpy166II GTNNAC 9 cut(s) 921, 1348, 1424, 1858, 1892, 2276, 2441, 2714, 2756
Hpy188I TCNGA 9 cut(s) 460, 1114, 1474, 1605, 1653, 1818, 1867, 2028, 2776
Hpy8I GTNNAC 9 cut(s) 921, 1348, 1424, 1858, 1892, 2276, 2441, 2714, 2756
Hpy99I CGWCG 7 cut(s) 1002, 1609, 2090, 2260, 2425, 2590, 2650
HpyAV CCTTC 9 cut(s) 455, 683, 1181, 1429, 1790, 1905, 2023, 2202, 2367
HpyCH4IV ACGT 5 cut(s) 889, 1420, 1476, 1781, 2716
HpyF3I CTNAG 5 cut(s) 320, 567, 1527, 1650, 2632
HpySE526I ACGT 5 cut(s) 889, 1420, 1476, 1781, 2716
Hsp92I GRCGYC 2 cut(s) 504, 2088
HspAI GCGC 4 cut(s) 346, 1078, 1215, 1966
Ksp22I TGATCA 2 cut(s) 1408, 1515
LmnI GCTCC 3 cut(s) 1085, 1438, 1766
Lsp1109I GCAGC 5 cut(s) 289, 346, 658, 1300, 1893
LweI GCATC 6 cut(s) 346, 733, 744, 1188, 1245, 2767
MaeI CTAG 4 cut(s) 605, 962, 1016, 1670
MaeII ACGT 5 cut(s) 889, 1420, 1476, 1781, 2716
MaeIII GTNAC 7 cut(s) 60, 111, 505, 1708, 1777, 1810, 2675
MbiI CCGCTC 3 cut(s) 2179, 2344, 2509
MfeI CAATTG 1 cut(s) 546
MflI RGATCY 5 cut(s) 1630, 1672, 2173, 2338, 2503
MhlI GDGCHC 1 cut(s) 382
MlsI TGGCCA 1 cut(s) 426
MluNI TGGCCA 1 cut(s) 426
MlyI GAGTC 5 cut(s) 359, 698, 947, 1463, 1798
MmeI TCCRAC 1 cut(s) 1628
Mox20I TGGCCA 1 cut(s) 426
Mph1103I ATGCAT 1 cut(s) 2782
MroXI GAANNNNTTC 2 cut(s) 1401, 2604
MscI TGGCCA 1 cut(s) 426
MslI CAYNNNNRTG 3 cut(s) 1130, 1911, 1961
Msp20I TGGCCA 1 cut(s) 426
MspA1I CMGCKG 2 cut(s) 302, 1750
MspCI CTTAAG 1 cut(s) 1084
MspI CCGG 1 cut(s) 1541
MunI CAATTG 1 cut(s) 546
MvnI CGCG 3 cut(s) 348, 1215, 1968
NlaIV GGNNCC 4 cut(s) 277, 381, 956, 1296
NmuCI GTSAC 4 cut(s) 505, 1708, 1777, 1810
NsiI ATGCAT 1 cut(s) 2782
NspI RCATGY 6 cut(s) 299, 392, 821, 1015, 1150, 1761
PaeI GCATGC 4 cut(s) 392, 1015, 1150, 1761
PagI TCATGA 2 cut(s) 492, 1638
PciI ACATGT 1 cut(s) 817
PdmI GAANNNNTTC 2 cut(s) 1401, 2604
PfeI GAWTC 5 cut(s) 197, 629, 1387, 1581, 2743
Pfl23II CGTACG 1 cut(s) 886
PflMI CCANNNNNTGG 1 cut(s) 1225
PkrI GCNGC 6 cut(s) 301, 304, 336, 648, 1315, 1883
PleI GAGTC 5 cut(s) 358, 698, 946, 1463, 1798
PpsI GAGTC 5 cut(s) 358, 698, 946, 1463, 1798
Ppu21I YACGTR 1 cut(s) 1421
PscI ACATGT 1 cut(s) 817
PshAI GACNNNNGTC 1 cut(s) 1808
PspFI CCCAGC 2 cut(s) 851, 1750
PspLI CGTACG 1 cut(s) 886
PspN4I GGNNCC 4 cut(s) 277, 381, 956, 1296
PspPI GGNCC 7 cut(s) 955, 1295, 2099, 2260, 2425, 2590, 2655
PsuI RGATCY 5 cut(s) 1630, 1672, 2173, 2338, 2503
RseI CAYNNNNRTG 3 cut(s) 1130, 1911, 1961
SatI GCNGC 6 cut(s) 300, 303, 335, 647, 1314, 1882
Sau96I GGNCC 7 cut(s) 955, 1295, 2099, 2260, 2425, 2590, 2655
SchI GAGTC 5 cut(s) 359, 698, 947, 1463, 1798
SduI GDGCHC 1 cut(s) 382
SfaNI GCATC 6 cut(s) 346, 733, 744, 1188, 1245, 2767
SfcI CTRYAG 2 cut(s) 650, 988
SinI GGWCC 2 cut(s) 955, 2655
SmiMI CAYNNNNRTG 3 cut(s) 1130, 1911, 1961
SmlI CTYRAG 2 cut(s) 1084, 1442
SmoI CTYRAG 2 cut(s) 1084, 1442
SnaBI TACGTA 1 cut(s) 1421
SphI GCATGC 4 cut(s) 392, 1015, 1150, 1761
SsiI CCGC 7 cut(s) 300, 1213, 1588, 1748, 2177, 2342, 2507
SspI AATATT 4 cut(s) 82, 133, 183, 2703
SspMI CTAG 4 cut(s) 605, 962, 1016, 1670
StyI CCWWGG 3 cut(s) 758, 1329, 1568
TaiI ACGT 5 cut(s) 892, 1423, 1479, 1784, 2719
TaqI TCGA 4 cut(s) 588, 792, 930, 1665
TaqII GACCGA 1 cut(s) 343
TatI WGTACW 2 cut(s) 714, 2711
TauI GCSGC 1 cut(s) 302
TfiI GAWTC 5 cut(s) 197, 629, 1387, 1581, 2743
TscAI CASTG 4 cut(s) 582, 676, 1043, 1157
TseFI GTSAC 4 cut(s) 505, 1708, 1777, 1810
TseI GCWGC 5 cut(s) 302, 334, 646, 1313, 1881
Tsp45I GTSAC 4 cut(s) 505, 1708, 1777, 1810
TspGWI ACGGA 4 cut(s) 697, 1622, 1939, 2601
TspRI CASTG 4 cut(s) 582, 676, 1043, 1157
Van91I CCANNNNNTGG 1 cut(s) 1225
Vha464I CTTAAG 1 cut(s) 1084
VpaK11BI GGWCC 2 cut(s) 955, 2655
XapI RAATTY 4 cut(s) 779, 971, 2022, 2660
XceI RCATGY 6 cut(s) 299, 392, 821, 1015, 1150, 1761
XcmI CCANNNNNNNNNTGG 2 cut(s) 1592, 2101
XmiI GTMKAC 1 cut(s) 1423
XmnI GAANNNNTTC 2 cut(s) 1401, 2604
XspI CTAG 4 cut(s) 605, 962, 1016, 1670
Zsp2I ATGCAT 1 cut(s) 2782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.