pycom13g28040

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
24057598 .. 24062938
5341 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g28040.7

Sequence Viewer

Length: 4899 bp
ATGCTTAGGTACATTTGTAGGGAAGCTAGTTGTCTAGTTCTACATGCTAACTTCATACATAATCACCCCCTGACAACCCTTTCAAGCTTATCCAAACTGATTGTGGGGCATGGCACTGCCCATATTATGTTATCCAATGGTACTGAATTCTTCCATAAAGGAAGCCTCATACTCACTCCGTTCCAAAAGAATGAATATAGCCAGAAGCGTTTTCTAGAGAAAATGGAACGCCTTCGGAATGGATTAAAACCATCCAGGCCTACTATGTGGTTGGCCAAAAGTTTGTGCACCGTTGTTTGGGCCCAAAATATTATTGTTGGGCCGAGCAACAGGATGTGCTCGGCCCAAGGTGATGGCAAATACTATGGGCCGAATAATAAATCTTGGGCCAGATGGCAGGGTCGGCCAAATCCTATCCTAAGTGGCTCGGATAAAGAGAAAAGGTCGAAGAAGTCCTGGTGCGACCAGGATTCTCGACCGGTAAGGAATAAAGCCTCGAAAAGAAGGAGAATTCAGAATCCCAGTGAGAGTAGGTTGGTTCGAATTAGAATCGAAATGGGACAAGGACTCCTAATCCAAATCAGAATACGAACTGGTTTCAAGGAATGGGCAGCATACAATTGCCCTGCGCAAAACCTCTCAAACACCTTGAGATTTTTCCTTTTCTTTTCCTGCCGACACACCTTCAGTTTGGATAAACAGCACTGTGGAAGCACCCGGCGAGCATCTTCAGTTTGGATAAACAGCACTGCTGCCGCAGAATCAGCCGACCGAAAAGCACCTTCAATTTGGATAAACAGCACTGCGTCGAGGTCGACCGGTTATCTATCTAAGTCTCGGCCGAGAAGGGTTCTCGAACCTTTGTTGGCAGAGGTCACCTTCCTAGCCTTTTCGGACGCCGAGTTATTTTATGATTGGATTCTCGCAAGTAGGTTTCAGGGTTCGGCATTCCGACGGCCGAACTACGTTTACCATCAAGACATACATCACGTTCGAGTACCTGTGCCCGTACAGTTTGGTCTCAATTCGACGTGCTTATACTCTTACGAATATCATCACATAGTAGCCTTGTCTTCAGGCTGTAAAACTCAGAGACCGAGAGCGTTCCTTCCTCGGTCGCAATCACAAGATAGAAGTCAACGACGTGCTCCAAGCGACATCAACAAATTTTACTCCTCGACCGAGCTCGGCCGACGAGTTGGCACGCCCCGCATTCAACCGAAGGACGTAGTTAGCTTACTAGTTACTCGGCCTACGCGCCACTGGGACCTTTGTGCTAAACCTTCGGAGTTCATGACCATTGAGACACGGGCTACGAAGCAGAAAACAACCATGGAAAGTCAACGACTGACTTGCCAGTGCAAGGCCTTGGGCAGGATTTACACTCTACAAAAAATCCGATCGATAGTTGCGCCGCCCGAGGCCACAAGTGTAACACGCCGAGAGAGTGAAATCTGTCTCGGCGGGCAACCTTACAACCCAGCAGTACCGAATCAAACAGCTGGAATGTTCATGGTGGGGAAGGAACAATATCGTCAGGTCGAGCAGTCGATTGGTCAGAAAATGAATGATTTGCTAGACGCAATACGTAGTAACAGTGATACACAGACCAGAATGCTTGAACTACTGGTTAGTAAAGCCTTCGAAGATGGCCAGGTCGGCCCACCTCGGCAGCTCCCGACGAATGTGCCCATACCAGCCGAGAGAGGGCCCGCCCGGCCGCAACCAATCACCTTAGAAAGAAGAGGTGGACCGGGAAATAGATTCGAGGGACCAAGCCAGGGAGAAGAAGCCGCTTCCATAAACGTGACCGAAGTCCAGAGAATGATTGATTCGGCCCTAAAGAAAGGACCGAAGTTTCCAAAATTCATTCATCCATACCCGGCTTATGTGGAAAGGTTTGAATACCCACGAGGATTTAAGATCCCTGATTTCAGCCTCTTCGCCGGGGAATCGTCTTTATCCTCATTAGAACATGTGGCTTGGTTCACAGCACAGTGTGGAGACGTCAATAGCGACTTCTACAAATTACGGATGTTTAACTTTTCACTGACAGGCTCAAGTTGGGAAGAGTTAGCCGAAAAGTTCCATGAGCAATTTTATCGGCCAGGGATGGAGATGTCTGTATCATCGTTGGCCAGGATGGCTCAGGCATCCGACGAATCTCCAATGGAATACCTAACAAGGTTTAAGTCGGCCAAGAATTGGTGCCGAGTACCACTCCCCGAAGTGGAATTCGTCAGGATTGCCCTCAACGGATTAGACGTGGAATACAAAAAGAAGTTCCTGGGGGCAAACATCCGAGATATGTACGAACTTGCTCAACACGTTGAGCAATATGATTATCTGCTCCGAGAAGAAAAGATATCGAAGTCACCATCTCGGGGAACGCTGTATAAGAATCCCACGGTTAGCTACGCATCGGCCGAAAGTGAAGACCCTCAGTATGCTAGCGTAGATGCGGCCGAGATAGTAATCGACAAACCCTATGTTTGCAAGGCCTTGGCGCAGGTGAATTCCAAAGACACCAAAACCCGTTTGGCTGCCGAGGAAATGAGTAAGTCATCGAAAGTATACACTTTCGATATCACCAAAGCTGATGCAATCTTCGATCAATTATTGGCATCAAAAATCATCAAGCTTCGGCCGGGACATAATATCCCTAAGGCCGATGAATTAAAAGGAAAGATATACTGCAAGTATCATAATTCTAATAAGCATGCAACCAATAATTGTGTTGGGTTCCGAGACACAATTCAAAGTTGGATCGAGAAAGGAAAGTTGAAATTTCCGGAAAAGCAGATGGCGGTTGACGTCAATCCCTTCCCTTCAACAACAATCGGTATGGTGGATGTTCATATTCTTAAAAACAAAGGGAAGGCCGAATACGTCCCGGTGCAGCATATCCGTCAACGGAATGGCCGAACAAGATTAAAGCTTGATTTGTTTTCAAATGCACCACCTGTGGAACAATCAGGGCCACCCGCCGATGATCCTATGACGATCGATCAATGTAAAACACCAGTTGACCCTAGGAAGAAGACATCCTCAACATTCTCCACGGCCCCTGTAACATCACCGAAGGGACTTGGTAACGGTCCACGACGCCAAGTGTTTGATCGACTCGGCCCACAAGTACGGCCGAAAAACCGGACCTCGATCAGACGGCGTCTGGATTTCGACGCACCTTTCTACAATGAGGATTATTACTCACGCAATACCAACAGTTCGGGCTCACCAGCCGATCGCAAAACTTTCAAACCACCAAGGACATCCGATCAACGCTGGTACAGTTACAATTCTCCAACTGGCTTATATACGGCGCTATCCAAATCCCAAAAACGTCGTCGTCAGCGGATAGATTGTATGGCTCGGCGACGAGAAGAACAGGCCAGCCCGGCCAACCAGTGGCAACCAAAGAAGGCCGTGGAAGACATTAGCGAACGGCCAACCCCGACTATCATGACCGAGTTAGCCGAAGGGAAGAAAGTAGCAGCTACCGGTTTCGAAACCACCATTGAGGAATCTGAGAAACGTATTAAGATCCTTCTCCGGCCTGGGGAAACGAGAGCTCGTCTAGAGTACTTTAGACAAGAGGCCGAAAAGAGACTTTCTCCGTTACCACCGCGCGAGCCGTTTATTAAAATACGGCGTAACTTACATCCTCCATTCCTCGGTGAATCCTTGGAATACATGCTAGAGTTTCATAAGAAATACTCCGCCAATGACTTGTACGGATTACCCAAGGCGTGTCAGGAAGCCCTCGACCTAGCTTTAACTTGCCCTGATGCCGAGCAAATTATCCAGAAAACTTCCGACCCAGCAATTAAAGCTAGGTTCCAACATATACAGGAGGCTCGGGTCCTTGGTTTTGAGGTCGATCCCTATACAGACATCGACACCGCCGAATTACCCTTTTCGCTTGAAGGCCTCCAGCATTTACGCTATCATTTCGAAGTTTTCTCGGCTGTATCACTTTTCGGCCTCACGGCCGACGAAGAACAACGGATAACACGGTTGGATACATATCTAGACACGAGGAACGCCCGTATTGCCTATGAAGAACGAGCCCGTGTAGCCAAGGACCAACGTAAATCTTCGGCAGTCAACATCGTCGAGGGAAATAGCCCACCCGCACTCGATTTGGTTCCCACGTCTCAGATACCGGTTCATACCGAGGAACTCAAAAGTTTGATCGAGGATGTTCCGTCGACTGCTACGGGGGTCAGTTCTGCAGAAGACGACGACCACAATCCAATGGGCCCCTCGGTCCTCGAACATATGGAGATCAGTATGGTCCACGTCCTACCAGCTGAAATCCAACCGAGTACCCACCAGTCGAATTTCTTGGACGGAGACGTAGTTGCCGAGGAGGCAACACAAGTAGACTTCGTCGTAAACGACGACGATAGAGAACACCGAAGCGGGGACAACCTTAAGACAGCGTTGGCCGAGCTATTTCCCCACTCCCCCTCGGTTAATCTCCAACACCTGAAGCCGTTGTATGTCACGGCTCACATCGAAGGATTTCCCATTTCTAAGGTGTTCGTCGACTGTGGTGCCACAGTCAACATTATGCCAATCTCCGTCATGAAAGCTTTACGCCGTTCTGATAGTGAACTCATTCCATCAGGGATCACTATGAGCAGCTTCGTTGGTGATAAGTCTCAGACCAAAGGAGTACTCCCGTTGGAAGTTAGCATTGCCGGTCGTCAACACATGACGGCTTTCTTTGTCATTGATTCCAAGACCGATTATAACGCATTACTTGGTCGCGACTGGATCCACCAAACCAATTGCATTCCGTCATCACTCTACCAAGTCCTCATCTTTTGGGATGGCCAATCGGTCGTGGTCCACCCAGCCGATAACCAGCCATTTGAAACCAACATGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1633

Amino Acids

184.96

Weight (kDa)

9.22

Isoelectric Point (pI)

53.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4758
AarI CACCTGC 1 cut(s) 2500
AatII GACGTC 2 cut(s) 2010, 2817
Acc16I TGCGCA 1 cut(s) 630
Acc36I ACCTGC 1 cut(s) 2500
AccB1I GGYRCC 2 cut(s) 2208, 4559
AccB7I CCANNNNNTGG 2 cut(s) 2205, 3408
AccI GTMKAC 5 cut(s) 815, 2574, 4211, 4386, 4551
AccII CGCG 4 cut(s) 1258, 3628, 3630, 4776
AccIII TCCGGA 1 cut(s) 2791
AclWI GGATC 8 cut(s) 1918, 2774, 2987, 3538, 3875, 4643, 4777, 4790
AcsI RAATTY 8 cut(s) 146, 510, 1166, 1865, 2234, 2515, 2786, 4342
AcuI CTGAAG 4 cut(s) 670, 714, 1059, 4514
AcyI GRCGYC 5 cut(s) 897, 2007, 2814, 3106, 3169
AdeI CACNNNGTG 1 cut(s) 2000
AflII CTTAAG 1 cut(s) 4436
AflIII ACRYGT 2 cut(s) 1975, 2326
AgeI ACCGGT 4 cut(s) 478, 818, 3500, 4165
AhlI ACTAGT 1 cut(s) 1240
AjiI CACGTC 5 cut(s) 1032, 1145, 2266, 4155, 4303
AjnI CCWGG 9 cut(s) 254, 455, 465, 1653, 1779, 2107, 2138, 2286, 3556
Alw21I GWGCWC 5 cut(s) 290, 341, 1150, 1188, 3574
Alw44I GTGCAC 1 cut(s) 286
AlwI GGATC 8 cut(s) 1918, 2774, 2987, 3538, 3875, 4643, 4777, 4790
Ama87I CYCGRG 3 cut(s) 1418, 2382, 3858
Aor13HI TCCGGA 1 cut(s) 2791
ApaI GGGCCC 3 cut(s) 304, 1713, 4265
ApaLI GTGCAC 1 cut(s) 286
ApeKI GCWGC 7 cut(s) 611, 752, 1672, 2543, 2899, 3494, 4647
ApoI RAATTY 8 cut(s) 146, 510, 1166, 1865, 2234, 2515, 2786, 4342
ArsI GACNNNNNNTTYG 2 cut(s) 3331, 3363
AsiGI ACCGGT 4 cut(s) 478, 818, 3500, 4165
Asp700I GAANNNNTTC 3 cut(s) 231, 4527, 4623
AspA2I CCTAGG 1 cut(s) 3032
AspLEI GCGC 6 cut(s) 631, 1260, 1414, 2509, 3325, 3630
AsuC2I CCSGG 8 cut(s) 718, 1717, 1755, 1883, 1948, 2649, 2894, 3398
AsuII TTCGAA 4 cut(s) 541, 1644, 3507, 3954
AsuNHI GCTAGC 1 cut(s) 2450
AvaI CYCGRG 3 cut(s) 1418, 2382, 3858
AvrII CCTAGG 1 cut(s) 3032
AxyI CCTNAGG 1 cut(s) 2664
BaeGI GKGCMC 6 cut(s) 290, 304, 1008, 1692, 1713, 4265
BaeI ACNNNNGTAYC 1 cut(s) 34
BalI TGGCCA 4 cut(s) 275, 1653, 2138, 4842
BamHI GGATCC 1 cut(s) 4782
BanI GGYRCC 2 cut(s) 2208, 4559
BanII GRGCYC 7 cut(s) 304, 1188, 1713, 3236, 3574, 4072, 4265
BarI GAAGNNNNNNTAC 2 cut(s) 2870, 2902
BauI CACGAG 2 cut(s) 1911, 4036
BbsI GAAGAC 5 cut(s) 1065, 2442, 3047, 3438, 4245
Bbv12I GWGCWC 5 cut(s) 290, 341, 1150, 1188, 3574
BbvI GCAGC 7 cut(s) 623, 739, 1684, 2530, 2911, 3506, 4659
BcgI CGANNNNNNTGC 8 cut(s) 1335, 1369, 1669, 1703, 2084, 2118, 4541, 4575
BciT130I CCWGG 9 cut(s) 256, 457, 467, 1655, 1781, 2109, 2140, 2288, 3558
BciVI GTATCC 1 cut(s) 4015
BcnI CCSGG 8 cut(s) 718, 1717, 1755, 1883, 1948, 2649, 2894, 3398
BcuI ACTAGT 1 cut(s) 1240
BfmI CTRYAG 1 cut(s) 4233
BfoI RGCGCY 1 cut(s) 3326
BfrI CTTAAG 1 cut(s) 4436
BfuAI ACCTGC 1 cut(s) 2500
BfuI GTATCC 1 cut(s) 4015
BglI GCCNNNNNGGC 5 cut(s) 1659, 1717, 2144, 3398, 4373
BlnI CCTAGG 1 cut(s) 3032
BmcAI AGTACT 2 cut(s) 3584, 4683
BmeT110I CYCGRG 3 cut(s) 1418, 2382, 3858
BmgBI CACGTC 5 cut(s) 1032, 1145, 2266, 4155, 4303
BmrI ACTGGG 2 cut(s) 516, 1273
BmsI GCATC 7 cut(s) 734, 2162, 2429, 2449, 2590, 2633, 3778
BmtI GCTAGC 1 cut(s) 2454
BmuI ACTGGG 2 cut(s) 516, 1273
BoxI GACNNNNGTC 1 cut(s) 1814
BpiI GAAGAC 5 cut(s) 1065, 2442, 3047, 3438, 4245
BplI GAGNNNNNCTC 4 cut(s) 2205, 2237, 3598, 3630
BpmI CTGGAG 1 cut(s) 3917
Bpu10I CCTNAGC 2 cut(s) 5, 2148
Bpu14I TTCGAA 4 cut(s) 541, 1644, 3507, 3954
BpuEI CTTGAG 2 cut(s) 670, 2044
BpuMI CCSGG 8 cut(s) 718, 1717, 1755, 1883, 1948, 2649, 2894, 3398
Bsa29I ATCGAT 2 cut(s) 1403, 3006
BsaAI YACGTR 1 cut(s) 1589
BsaBI GATNNNNATC 2 cut(s) 2474, 4026
BsaHI GRCGYC 5 cut(s) 897, 2007, 2814, 3106, 3169
BsaI GGTCTC 2 cut(s) 1025, 1087
BsaWI WCCGGW 6 cut(s) 478, 818, 2791, 3150, 3500, 4165
BsaXI ACNNNNNCTCC 4 cut(s) 552, 582, 4347, 4377
Bse118I RCCGGY 5 cut(s) 478, 818, 3500, 4165, 4706
Bse21I CCTNAGG 1 cut(s) 2664
Bse3DI GCAATG 1 cut(s) 4701
Bse8I GATNNNNATC 2 cut(s) 2474, 4026
BseAI TCCGGA 1 cut(s) 2791
BseBI CCWGG 9 cut(s) 256, 457, 467, 1655, 1781, 2109, 2140, 2288, 3558
BseCI ATCGAT 2 cut(s) 1403, 3006
BseJI GATNNNNATC 2 cut(s) 2474, 4026
BseMI GCAATG 1 cut(s) 4701
BseMII CTCAG 6 cut(s) 1103, 2162, 2456, 3519, 4172, 4682
BseRI GAGGAG 2 cut(s) 1165, 4385
BseSI GKGCMC 6 cut(s) 290, 304, 1008, 1692, 1713, 4265
BseX3I CGGCCG 9 cut(s) 839, 956, 1189, 1718, 2424, 2463, 2645, 3140, 3990
BseXI GCAGC 7 cut(s) 623, 739, 1684, 2530, 2911, 3506, 4659
BseYI CCCAGC 3 cut(s) 1480, 3820, 4861
BsgI GTGCAG 1 cut(s) 2918
Bsh1236I CGCG 4 cut(s) 1258, 3628, 3630, 4776
BshNI GGYRCC 2 cut(s) 2208, 4559
BshTI ACCGGT 4 cut(s) 478, 818, 3500, 4165
BshVI ATCGAT 2 cut(s) 1403, 3006
BsiHKAI GWGCWC 5 cut(s) 290, 341, 1150, 1188, 3574
BsiHKCI CYCGRG 3 cut(s) 1418, 2382, 3858
BslFI GGGAC 7 cut(s) 573, 1280, 1785, 2664, 2876, 3099, 4442
BsmBI CGTCTC 3 cut(s) 1998, 4161, 4350
BsmFI GGGAC 7 cut(s) 573, 1280, 1785, 2664, 2876, 3099, 4442
BsmI GAATGC 4 cut(s) 947, 1212, 1620, 4800
Bso31I GGTCTC 2 cut(s) 1025, 1087
BsoBI CYCGRG 3 cut(s) 1418, 2382, 3858
Bsp119I TTCGAA 4 cut(s) 541, 1644, 3507, 3954
Bsp120I GGGCCC 3 cut(s) 300, 1709, 4261
Bsp13I TCCGGA 1 cut(s) 2791
Bsp19I CCATGG 1 cut(s) 1332
Bsp68I TCGCGA 1 cut(s) 4776
BspCNI CTCAG 6 cut(s) 1102, 2161, 2455, 3520, 4171, 4681
BspDI ATCGAT 2 cut(s) 1403, 3006
BspEI TCCGGA 1 cut(s) 2791
BspFNI CGCG 4 cut(s) 1258, 3628, 3630, 4776
BspHI TCATGA 3 cut(s) 1293, 3462, 4590
BspMAI CTGCAG 1 cut(s) 4237
BspMI ACCTGC 1 cut(s) 2500
BspOI GCTAGC 1 cut(s) 2454
BspPI GGATC 8 cut(s) 1918, 2774, 2987, 3538, 3875, 4643, 4777, 4790
BspT104I TTCGAA 4 cut(s) 541, 1644, 3507, 3954
BspT107I GGYRCC 2 cut(s) 2208, 4559
BspTI CTTAAG 1 cut(s) 4436
BspTNI GGTCTC 2 cut(s) 1025, 1087
BsrDI GCAATG 1 cut(s) 4701
BsrFI RCCGGY 5 cut(s) 478, 818, 3500, 4165, 4706
BssAI RCCGGY 5 cut(s) 478, 818, 3500, 4165, 4706
BssNAI GTATAC 1 cut(s) 2575
BssNI GRCGYC 5 cut(s) 897, 2007, 2814, 3106, 3169
BssSI CACGAG 2 cut(s) 1911, 4036
Bst1107I GTATAC 1 cut(s) 2575
Bst2BI CACGAG 2 cut(s) 1911, 4036
Bst2UI CCWGG 9 cut(s) 256, 457, 467, 1655, 1781, 2109, 2140, 2288, 3558
Bst6I CTCTTC 3 cut(s) 1738, 1946, 2064
BstACI GRCGYC 5 cut(s) 897, 2007, 2814, 3106, 3169
BstAFI CTTAAG 1 cut(s) 4436
BstBAI YACGTR 1 cut(s) 1589
BstBI TTCGAA 4 cut(s) 541, 1644, 3507, 3954
BstC8I GCNNGC 8 cut(s) 723, 1205, 1466, 1713, 2452, 2721, 3394, 3632
BstDSI CCRYGG 4 cut(s) 1332, 2406, 3060, 3426
BstEII GGTNACC 1 cut(s) 874
BstENI CCTNNNNNAGG 1 cut(s) 1372
BstFNI CGCG 4 cut(s) 1258, 3628, 3630, 4776
BstH2I RGCGCY 1 cut(s) 3326
BstHHI GCGC 6 cut(s) 631, 1260, 1414, 2509, 3325, 3630
BstNI CCWGG 9 cut(s) 256, 457, 467, 1655, 1781, 2109, 2140, 2288, 3558
BstNSI RCATGY 4 cut(s) 47, 1979, 2723, 3697
BstPAI GACNNNNGTC 1 cut(s) 1814
BstPI GGTNACC 1 cut(s) 874
BstSFI CTRYAG 1 cut(s) 4233
BstSLI GKGCMC 6 cut(s) 290, 304, 1008, 1692, 1713, 4265
BstSNI TACGTA 1 cut(s) 1589
BstUI CGCG 4 cut(s) 1258, 3628, 3630, 4776
BstV1I GCAGC 7 cut(s) 623, 739, 1684, 2530, 2911, 3506, 4659
BstV2I GAAGAC 5 cut(s) 1065, 2442, 3047, 3438, 4245
BstX2I RGATCY 3 cut(s) 1923, 3543, 4782
BstXI CCANNNNNNTGG 1 cut(s) 353
BstYI RGATCY 3 cut(s) 1923, 3543, 4782
BstZ17I GTATAC 1 cut(s) 2575
BstZI CGGCCG 9 cut(s) 839, 956, 1189, 1718, 2424, 2463, 2645, 3140, 3990
Bsu15I ATCGAT 2 cut(s) 1403, 3006
Bsu36I CCTNAGG 1 cut(s) 2664
BsuI GTATCC 1 cut(s) 4015
BsuTUI ATCGAT 2 cut(s) 1403, 3006
BtgI CCRYGG 4 cut(s) 1332, 2406, 3060, 3426
BtrI CACGTC 5 cut(s) 1032, 1145, 2266, 4155, 4303
BtsI GCAGTG 3 cut(s) 114, 747, 801
BtuMI TCGCGA 1 cut(s) 4776
BveI ACCTGC 1 cut(s) 2500
Cac8I GCNNGC 8 cut(s) 723, 1205, 1466, 1713, 2452, 2721, 3394, 3632
CciI TCATGA 3 cut(s) 1293, 3462, 4590
CfoI GCGC 6 cut(s) 631, 1260, 1414, 2509, 3325, 3630
Cfr10I RCCGGY 5 cut(s) 478, 818, 3500, 4165, 4706
ClaI ATCGAT 2 cut(s) 1403, 3006
CseI GACGC 6 cut(s) 795, 905, 1589, 3114, 3158, 3191
CspAI ACCGGT 4 cut(s) 478, 818, 3500, 4165
DraIII CACNNNGTG 1 cut(s) 2000
EagI CGGCCG 9 cut(s) 839, 956, 1189, 1718, 2424, 2463, 2645, 3140, 3990
Eam1104I CTCTTC 3 cut(s) 1738, 1946, 2064
EarI CTCTTC 3 cut(s) 1738, 1946, 2064
EciI GGCGGA 1 cut(s) 3709
Ecl136II GAGCTC 2 cut(s) 1186, 3572
EclXI CGGCCG 9 cut(s) 839, 956, 1189, 1718, 2424, 2463, 2645, 3140, 3990
Eco105I TACGTA 1 cut(s) 1589
Eco147I AGGCCT 4 cut(s) 259, 1367, 2501, 3930
Eco24I GRGCYC 7 cut(s) 304, 1188, 1713, 3236, 3574, 4072, 4265
Eco31I GGTCTC 2 cut(s) 1025, 1087
Eco32I GATATC 2 cut(s) 2367, 2587
Eco52I CGGCCG 9 cut(s) 839, 956, 1189, 1718, 2424, 2463, 2645, 3140, 3990
Eco53kI GAGCTC 2 cut(s) 1186, 3572
Eco57I CTGAAG 4 cut(s) 670, 714, 1059, 4514
Eco81I CCTNAGG 1 cut(s) 2664
Eco88I CYCGRG 3 cut(s) 1418, 2382, 3858
Eco91I GGTNACC 1 cut(s) 874
EcoICRI GAGCTC 2 cut(s) 1186, 3572
EcoNI CCTNNNNNAGG 1 cut(s) 1372
EcoO109I RGGNCCY 4 cut(s) 1267, 1709, 3862, 4262
EcoO65I GGTNACC 1 cut(s) 874
EcoRI GAATTC 4 cut(s) 146, 510, 2234, 2515
EcoRII CCWGG 9 cut(s) 254, 455, 465, 1653, 1779, 2107, 2138, 2286, 3556
EcoRV GATATC 2 cut(s) 2367, 2587
EcoT38I GRGCYC 7 cut(s) 304, 1188, 1713, 3236, 3574, 4072, 4265
Esp3I CGTCTC 3 cut(s) 1998, 4161, 4350
FaqI GGGAC 7 cut(s) 573, 1280, 1785, 2664, 2876, 3099, 4442
FauI CCCGC 6 cut(s) 1217, 1457, 1720, 2992, 4141, 4418
FauNDI CATATG 1 cut(s) 4281
FblI GTMKAC 5 cut(s) 815, 2574, 4211, 4386, 4551
FriOI GRGCYC 7 cut(s) 304, 1188, 1713, 3236, 3574, 4072, 4265
FspI TGCGCA 1 cut(s) 630
GlaI GCGC 6 cut(s) 630, 1259, 1413, 2508, 3324, 3629
GsaI CCCAGC 3 cut(s) 1484, 3824, 4865
GsuI CTGGAG 1 cut(s) 3917
HaeII RGCGCY 1 cut(s) 3326
HgaI GACGC 6 cut(s) 795, 905, 1589, 3114, 3158, 3191
HhaI GCGC 6 cut(s) 631, 1260, 1414, 2509, 3325, 3630
Hin1I GRCGYC 5 cut(s) 897, 2007, 2814, 3106, 3169
Hin6I GCGC 6 cut(s) 629, 1258, 1412, 2507, 3323, 3628
HinP1I GCGC 6 cut(s) 629, 1258, 1412, 2507, 3323, 3628
HindIII AAGCTT 4 cut(s) 85, 2639, 2936, 4596
Hsp92I GRCGYC 5 cut(s) 897, 2007, 2814, 3106, 3169
HspAI GCGC 6 cut(s) 629, 1258, 1412, 2507, 3323, 3628
Kpn2I TCCGGA 1 cut(s) 2791
LmnI GCTCC 3 cut(s) 1153, 1680, 2355
Lsp1109I GCAGC 7 cut(s) 623, 739, 1684, 2530, 2911, 3506, 4659
LweI GCATC 7 cut(s) 734, 2162, 2429, 2449, 2590, 2633, 3778
MfeI CAATTG 2 cut(s) 619, 4795
MflI RGATCY 3 cut(s) 1923, 3543, 4782
MlsI TGGCCA 4 cut(s) 275, 1653, 2138, 4842
MluNI TGGCCA 4 cut(s) 275, 1653, 2138, 4842
MlyI GAGTC 2 cut(s) 561, 3117
Mox20I TGGCCA 4 cut(s) 275, 1653, 2138, 4842
MroI TCCGGA 1 cut(s) 2791
MroXI GAANNNNTTC 3 cut(s) 231, 4527, 4623
MscI TGGCCA 4 cut(s) 275, 1653, 2138, 4842
MslI CAYNNNNRTG 1 cut(s) 1805
Msp20I TGGCCA 4 cut(s) 275, 1653, 2138, 4842
MspA1I CMGCKG 3 cut(s) 1502, 3355, 4313
MspCI CTTAAG 1 cut(s) 4436
MunI CAATTG 2 cut(s) 619, 4795
Mva1269I GAATGC 4 cut(s) 947, 1212, 1620, 4800
MvaI CCWGG 9 cut(s) 256, 457, 467, 1655, 1781, 2109, 2140, 2288, 3558
MvnI CGCG 4 cut(s) 1258, 3628, 3630, 4776
NciI CCSGG 8 cut(s) 718, 1717, 1755, 1883, 1948, 2649, 2894, 3398
NcoI CCATGG 1 cut(s) 1332
NdeI CATATG 1 cut(s) 4281
NheI GCTAGC 1 cut(s) 2450
NmuCI GTSAC 4 cut(s) 874, 1807, 2373, 4507
NruI TCGCGA 1 cut(s) 4776
NsbI TGCGCA 1 cut(s) 630
NspI RCATGY 4 cut(s) 47, 1979, 2723, 3697
NspV TTCGAA 4 cut(s) 541, 1644, 3507, 3954
PaeI GCATGC 1 cut(s) 2723
PagI TCATGA 3 cut(s) 1293, 3462, 4590
PaqCI CACCTGC 1 cut(s) 2500
PceI AGGCCT 4 cut(s) 259, 1367, 2501, 3930
PciI ACATGT 1 cut(s) 1975
PcsI WCGNNNNNNNCGW 8 cut(s) 2013, 2262, 2424, 2920, 3903, 4365, 4398, 4401
PctI GAATGC 4 cut(s) 947, 1212, 1620, 4800
PdmI GAANNNNTTC 3 cut(s) 231, 4527, 4623
PflFI GACNNNGTC 2 cut(s) 3168, 4391
PflMI CCANNNNNTGG 2 cut(s) 2205, 3408
PinAI ACCGGT 4 cut(s) 478, 818, 3500, 4165
Ple19I CGATCG 3 cut(s) 1403, 3006, 3247
PleI GAGTC 2 cut(s) 561, 3117
PpsI GAGTC 2 cut(s) 561, 3117
Ppu21I YACGTR 1 cut(s) 1589
PpuMI RGGWCCY 2 cut(s) 1267, 3862
PscI ACATGT 1 cut(s) 1975
PshAI GACNNNNGTC 1 cut(s) 1814
PsiI TTATAA 1 cut(s) 4758
Psp124BI GAGCTC 2 cut(s) 1188, 3574
Psp5II RGGWCCY 2 cut(s) 1267, 3862
Psp6I CCWGG 9 cut(s) 254, 455, 465, 1653, 1779, 2107, 2138, 2286, 3556
PspEI GGTNACC 1 cut(s) 874
PspFI CCCAGC 3 cut(s) 1480, 3820, 4861
PspGI CCWGG 9 cut(s) 254, 455, 465, 1653, 1779, 2107, 2138, 2286, 3556
PspOMI GGGCCC 3 cut(s) 300, 1709, 4261
PspPPI RGGWCCY 2 cut(s) 1267, 3862
PsrI GAACNNNNNNTAC 2 cut(s) 953, 985
PstI CTGCAG 1 cut(s) 4237
PsuI RGATCY 3 cut(s) 1923, 3543, 4782
PsyI GACNNNGTC 2 cut(s) 3168, 4391
PvuI CGATCG 3 cut(s) 1403, 3006, 3247
PvuII CAGCTG 2 cut(s) 1502, 4313
RruI TCGCGA 1 cut(s) 4776
RseI CAYNNNNRTG 1 cut(s) 1805
SacI GAGCTC 2 cut(s) 1188, 3574
SalI GTCGAC 3 cut(s) 814, 4210, 4550
ScaI AGTACT 2 cut(s) 3584, 4683
SchI GAGTC 2 cut(s) 561, 3117
SfaNI GCATC 7 cut(s) 734, 2162, 2429, 2449, 2590, 2633, 3778
SfcI CTRYAG 1 cut(s) 4233
SfiI GGCCNNNNNGGCC 3 cut(s) 1659, 1717, 3398
SfuI TTCGAA 4 cut(s) 541, 1644, 3507, 3954
SmiMI CAYNNNNRTG 1 cut(s) 1805
SmlI CTYRAG 3 cut(s) 649, 2059, 4436
SmoI CTYRAG 3 cut(s) 649, 2059, 4436
SnaBI TACGTA 1 cut(s) 1589
SpeI ACTAGT 1 cut(s) 1240
SphI GCATGC 1 cut(s) 2723
SseBI AGGCCT 4 cut(s) 259, 1367, 2501, 3930
SspI AATATT 1 cut(s) 310
SstI GAGCTC 2 cut(s) 1188, 3574
StuI AGGCCT 4 cut(s) 259, 1367, 2501, 3930
TatI WGTACW 2 cut(s) 3582, 4681
TauI GCSGC 5 cut(s) 758, 1417, 1723, 1796, 2465
TseFI GTSAC 4 cut(s) 874, 1807, 2373, 4507
TseI GCWGC 7 cut(s) 611, 752, 1672, 2543, 2899, 3494, 4647
Tsp45I GTSAC 4 cut(s) 874, 1807, 2373, 4507
Tth111I GACNNNGTC 2 cut(s) 3168, 4391
Van91I CCANNNNNTGG 2 cut(s) 2205, 3408
Vha464I CTTAAG 1 cut(s) 4436
VneI GTGCAC 1 cut(s) 286
XagI CCTNNNNNAGG 1 cut(s) 1372
XapI RAATTY 8 cut(s) 146, 510, 1166, 1865, 2234, 2515, 2786, 4342
XbaI TCTAGA 3 cut(s) 214, 3577, 4030
XceI RCATGY 4 cut(s) 47, 1979, 2723, 3697
XcmI CCANNNNNNNNNTGG 2 cut(s) 100, 2536
XmaJI CCTAGG 1 cut(s) 3032
XmiI GTMKAC 5 cut(s) 815, 2574, 4211, 4386, 4551
XmnI GAANNNNTTC 3 cut(s) 231, 4527, 4623
ZraI GACGTC 2 cut(s) 2008, 2815
ZrmI AGTACT 2 cut(s) 3584, 4683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.