FvH4_3g26704

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000128
Physical Location & Seq
Reverse (-)
19859898 .. 19861823
1926 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26704.t1

Sequence Viewer

Length: 1281 bp
ATGCAAGTCATGGTGACAGGCGCGTCCACCATTGAAGAGCAAATAGCCAATCTGATGGGAGCGGTTGAGAAGCTTACCAAAACGGTGGAAGAAAAAGACATGCAAATTGCCGAGCTTTATAGCAGGCTCGAAAATCAAGATGAAGAAAAGAAGGAAAAAGGTAAGAAAGAGTCCATGAGTGACCAACGAAAAGATAAAGCTTTCAGCAGCAAGGTTGACAAGGTTGTGAAAAGGCCTACAAAGGAGTCGATGACTGTGAATGTTGCTCCAATCAAAATCTCCACACGAGACAAGAGGGAGGTTAAGAAAGCAGAACCAACTCAAACCTACGAGAGGAGGAAGCGCTCATTGATTGAGTTGGAGCAAAAGACTTACCCGTTCCTAGATTCTGACGTAGCAGGCATGTTGGAGGATTTGCTTGGGAACAAGGTGATAGAACTTCCAGAGTGCAAACATCCAGAAGAAATGCATCTAGTCAACGACCCGAAGTATTGCAAGTTTCATCGCGTCATTAGCCACCTAGTCAAGAAGTGCTTTGTTTTGAAGGATTTGATCATGAAACTCGCCAAACAAGGAAGAATCGAGCTTGATGTTGATGAGGTTGCTGAGGTCAATTGCACTACCATTTCATTTGGCTCTTTTGAGCCAGTTCAAGTACCTTCTATGCTAATGAAAGCGCCATACCATTTCTCAAAGGAGGCTTGCAATGATAAAAAATTAGAGGAAGTGAAGCCAATCCAGCAAGTGAACCTCCCTCCTAAAGTTGCCTTATGCGACGATGACGAAGGATGGATACTCGTCACTCGAAGAAAAGCACGCAAAAGTGTGTTGTCAAGTCCACCACCCTTGCGGCCTAATCGCAAACAACCACATGAGAGTCATCGATGGCTCGAGAAGAATGAGACAAGGTGTATAAAGGAGGAGATCACTCCTTGTGTACAGAAGTCCCTCAATCAAAACCCGCCAACAAAGTGCATGCCTAAGGCGCGAATGGGTCTGAGAGCTAGCTCAATGATAACAAGTTATGAAGGTGGTTCCAAATATTATGAGAAGGTTGAAGAAAATGAAGTGTTTAAACAATTGGAAGACTTACCTCCAAAATTTAGCCTCTCTAACCTGTTGCAGCTGCCCAACTCGGCAAGACGTGCGTTAGTCCAATTGCTGCTTGATGTGGGCAAGCATTCTTCGAACATCAATGAATGCACGACATGCGTAGCATGTTGCGACGCCATTCACTTCACGGATGAAGATTTACAATTGGGTTCAAAGCCGCACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Asp_protease_2 Retrotrans_gag

Protein Analysis

427

Amino Acids

48.67

Weight (kDa)

8.41

Isoelectric Point (pI)

56.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 22
AccBSI CCGCTC 1 cut(s) 62
AccII CGCG 3 cut(s) 23, 507, 988
AciI CCGC 4 cut(s) 62, 850, 962, 1271
AcsI RAATTY 1 cut(s) 1100
AcyI GRCGYC 1 cut(s) 1227
AfaI GTAC 2 cut(s) 657, 939
AfeI AGCGCT 1 cut(s) 344
AfiI CCNNNNNNNGG 1 cut(s) 333
AgsI TTSAA 5 cut(s) 35, 544, 653, 1058, 1266
AjiI CACGTC 1 cut(s) 1145
AluBI AGCT 7 cut(s) 73, 115, 200, 586, 1004, 1008, 1126
AluI AGCT 7 cut(s) 73, 115, 200, 586, 1004, 1008, 1126
Alw26I GTCTC 2 cut(s) 282, 896
Ama87I CYCGRG 1 cut(s) 890
Aor51HI AGCGCT 1 cut(s) 344
AoxI GGCC 2 cut(s) 233, 851
ApeKI GCWGC 4 cut(s) 207, 1123, 1126, 1162
ApoI RAATTY 1 cut(s) 1100
AspLEI GCGC 4 cut(s) 23, 345, 679, 988
AsuHPI GGTGA 2 cut(s) 25, 442
AsuII TTCGAA 1 cut(s) 1187
AsuNHI GCTAGC 1 cut(s) 1004
AvaI CYCGRG 1 cut(s) 890
AxyI CCTNAGG 1 cut(s) 981
BarI GAAGNNNNNNTAC 2 cut(s) 777, 809
BauI CACGAG 1 cut(s) 285
BbsI GAAGAC 1 cut(s) 1092
BbvCI CCTCAGC 1 cut(s) 606
BbvI GCAGC 4 cut(s) 219, 1113, 1135, 1149
BccI CCATC 3 cut(s) 49, 783, 879
BciVI GTATCC 1 cut(s) 786
BclI TGATCA 1 cut(s) 552
BcoDI GTCTC 2 cut(s) 282, 896
BfaI CTAG 4 cut(s) 383, 473, 521, 1005
BfoI RGCGCY 2 cut(s) 346, 680
BfuI GTATCC 1 cut(s) 786
BisI GCNGC 6 cut(s) 208, 851, 1124, 1127, 1163, 1271
BlsI GCNGC 6 cut(s) 209, 852, 1125, 1128, 1164, 1272
BmeT110I CYCGRG 1 cut(s) 890
BmgBI CACGTC 1 cut(s) 1145
BmiI GGNNCC 1 cut(s) 1036
BmsI GCATC 1 cut(s) 478
BmtI GCTAGC 1 cut(s) 1008
BpiI GAAGAC 1 cut(s) 1092
Bpu10I CCTNAGC 1 cut(s) 606
Bpu14I TTCGAA 1 cut(s) 1187
Bsa29I ATCGAT 1 cut(s) 883
BsaHI GRCGYC 1 cut(s) 1227
Bsc4I CCNNNNNNNGG 1 cut(s) 333
Bse1I ACTGG 1 cut(s) 647
Bse21I CCTNAGG 1 cut(s) 981
Bse3DI GCAATG 1 cut(s) 712
BseCI ATCGAT 1 cut(s) 883
BseGI GGATG 3 cut(s) 454, 794, 1249
BseLI CCNNNNNNNGG 1 cut(s) 333
BseMI GCAATG 1 cut(s) 712
BseMII CTCAG 2 cut(s) 597, 989
BseNI ACTGG 1 cut(s) 647
BseRI GAGGAG 2 cut(s) 349, 935
BseXI GCAGC 4 cut(s) 219, 1113, 1135, 1149
Bsh1236I CGCG 3 cut(s) 23, 507, 988
BshFI GGCC 2 cut(s) 235, 853
BshVI ATCGAT 1 cut(s) 883
BsiHKCI CYCGRG 1 cut(s) 890
BslFI GGGAC 1 cut(s) 931
BslI CCNNNNNNNGG 1 cut(s) 333
BsmAI GTCTC 2 cut(s) 282, 896
BsmFI GGGAC 1 cut(s) 931
BsmI GAATGC 2 cut(s) 1180, 1205
BsnI GGCC 2 cut(s) 235, 853
BsoBI CYCGRG 1 cut(s) 890
Bsp119I TTCGAA 1 cut(s) 1187
Bsp1407I TGTACA 1 cut(s) 937
Bsp143I GATC 2 cut(s) 552, 924
BspACI CCGC 4 cut(s) 62, 850, 962, 1271
BspANI GGCC 2 cut(s) 235, 853
BspCNI CTCAG 2 cut(s) 598, 990
BspDI ATCGAT 1 cut(s) 883
BspFNI CGCG 3 cut(s) 23, 507, 988
BspHI TCATGA 1 cut(s) 555
BspLI GGNNCC 1 cut(s) 1036
BspOI GCTAGC 1 cut(s) 1008
BspQI GCTCTTC 1 cut(s) 30
BspT104I TTCGAA 1 cut(s) 1187
BsrBI CCGCTC 1 cut(s) 62
BsrDI GCAATG 1 cut(s) 712
BsrGI TGTACA 1 cut(s) 937
BsrI ACTGG 1 cut(s) 647
BssMI GATC 2 cut(s) 552, 924
BssNI GRCGYC 1 cut(s) 1227
BssSI CACGAG 1 cut(s) 285
Bst2BI CACGAG 1 cut(s) 285
Bst4CI ACNGT 2 cut(s) 85, 256
Bst6I CTCTTC 1 cut(s) 30
BstACI GRCGYC 1 cut(s) 1227
BstAPI GCANNNNNTGC 2 cut(s) 1145, 1209
BstAUI TGTACA 1 cut(s) 937
BstBI TTCGAA 1 cut(s) 1187
BstC8I GCNNGC 7 cut(s) 125, 400, 703, 817, 977, 1006, 1178
BstDEI CTNAG 3 cut(s) 606, 981, 998
BstENI CCTNNNNNAGG 1 cut(s) 331
BstF5I GGATG 3 cut(s) 454, 794, 1249
BstFNI CGCG 3 cut(s) 23, 507, 988
BstH2I RGCGCY 2 cut(s) 346, 680
BstHHI GCGC 4 cut(s) 23, 345, 679, 988
BstKTI GATC 2 cut(s) 555, 927
BstMAI GTCTC 2 cut(s) 282, 896
BstMBI GATC 2 cut(s) 552, 924
BstMWI GCNNNNNNNGC 5 cut(s) 513, 739, 985, 1145, 1209
BstNSI RCATGY 5 cut(s) 103, 406, 979, 1212, 1221
BstUI CGCG 3 cut(s) 23, 507, 988
BstV1I GCAGC 4 cut(s) 219, 1113, 1135, 1149
BstV2I GAAGAC 1 cut(s) 1092
BstXI CCANNNNNNTGG 2 cut(s) 55, 85
Bsu15I ATCGAT 1 cut(s) 883
Bsu36I CCTNAGG 1 cut(s) 981
BsuI GTATCC 1 cut(s) 786
BsuRI GGCC 2 cut(s) 235, 853
BsuTUI ATCGAT 1 cut(s) 883
BtgZI GCGATG 1 cut(s) 488
BtrI CACGTC 1 cut(s) 1145
BtsCI GGATG 3 cut(s) 454, 794, 1249
Cac8I GCNNGC 7 cut(s) 125, 400, 703, 817, 977, 1006, 1178
CciI TCATGA 1 cut(s) 555
CfoI GCGC 4 cut(s) 23, 345, 679, 988
ClaI ATCGAT 1 cut(s) 883
CseI GACGC 3 cut(s) 12, 496, 1235
Csp6I GTAC 2 cut(s) 656, 938
CspCI CAANNNNNGTGG 2 cut(s) 828, 863
CviAII CATG 9 cut(s) 10, 100, 175, 403, 556, 872, 976, 1209, 1218
CviQI GTAC 2 cut(s) 656, 938
DdeI CTNAG 3 cut(s) 606, 981, 998
DpnI GATC 2 cut(s) 554, 926
DpnII GATC 2 cut(s) 552, 924
DraI TTTAAA 1 cut(s) 1075
DrdI GACNNNNNNGTC 1 cut(s) 22
DseDI GACNNNNNNGTC 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
Eco147I AGGCCT 1 cut(s) 235
Eco47III AGCGCT 1 cut(s) 344
Eco81I CCTNAGG 1 cut(s) 981
Eco88I CYCGRG 1 cut(s) 890
EcoNI CCTNNNNNAGG 1 cut(s) 331
EcoT22I ATGCAT 1 cut(s) 471
FaeI CATG 9 cut(s) 13, 103, 178, 406, 559, 875, 979, 1212, 1221
FalI AAGNNNNNCTT 2 cut(s) 518, 550
FaqI GGGAC 1 cut(s) 931
FatI CATG 9 cut(s) 9, 99, 174, 402, 555, 871, 975, 1208, 1217
FauI CCCGC 1 cut(s) 969
FbaI TGATCA 1 cut(s) 552
Fnu4HI GCNGC 6 cut(s) 208, 851, 1124, 1127, 1163, 1271
FokI GGATG 3 cut(s) 441, 801, 1256
Fsp4HI GCNGC 6 cut(s) 208, 851, 1124, 1127, 1163, 1271
FspBI CTAG 4 cut(s) 383, 473, 521, 1005
GlaI GCGC 4 cut(s) 22, 344, 678, 987
GluI GCNGC 6 cut(s) 208, 851, 1124, 1127, 1163, 1271
HaeII RGCGCY 2 cut(s) 346, 680
HaeIII GGCC 2 cut(s) 235, 853
HgaI GACGC 3 cut(s) 12, 496, 1235
HhaI GCGC 4 cut(s) 23, 345, 679, 988
Hin1I GRCGYC 1 cut(s) 1227
Hin1II CATG 9 cut(s) 13, 103, 178, 406, 559, 875, 979, 1212, 1221
Hin6I GCGC 4 cut(s) 21, 343, 677, 986
HinP1I GCGC 4 cut(s) 21, 343, 677, 986
HincII GTYRAC 2 cut(s) 217, 478
HindII GTYRAC 2 cut(s) 217, 478
HindIII AAGCTT 2 cut(s) 71, 198
HinfI GANTC 5 cut(s) 170, 245, 386, 579, 877
HphI GGTGA 2 cut(s) 25, 442
Hpy166II GTNNAC 6 cut(s) 27, 217, 478, 748, 839, 938
Hpy188I TCNGA 3 cut(s) 54, 391, 999
Hpy188III TCNNGA 6 cut(s) 137, 443, 458, 526, 556, 892
Hpy8I GTNNAC 6 cut(s) 27, 217, 478, 748, 839, 938
Hpy99I CGWCG 2 cut(s) 779, 1229
HpyAV CCTTC 6 cut(s) 145, 538, 669, 779, 1022, 1045
HpyCH4III ACNGT 2 cut(s) 85, 256
HpyCH4IV ACGT 2 cut(s) 393, 1144
HpyF10VI GCNNNNNNNGC 5 cut(s) 513, 739, 985, 1145, 1209
HpyF3I CTNAG 3 cut(s) 606, 981, 998
HpySE526I ACGT 2 cut(s) 393, 1144
Hsp92I GRCGYC 1 cut(s) 1227
Hsp92II CATG 9 cut(s) 13, 103, 178, 406, 559, 875, 979, 1212, 1221
HspAI GCGC 4 cut(s) 21, 343, 677, 986
Ksp22I TGATCA 1 cut(s) 552
Kzo9I GATC 2 cut(s) 552, 924
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 3 cut(s) 59, 271, 361
LpnPI CCDG 8 cut(s) 3, 109, 384, 456, 471, 660, 752, 1130
Lsp1109I GCAGC 4 cut(s) 219, 1113, 1135, 1149
LweI GCATC 1 cut(s) 478
MaeI CTAG 4 cut(s) 383, 473, 521, 1005
MaeII ACGT 2 cut(s) 393, 1144
MaeIII GTNAC 3 cut(s) 13, 179, 799
MalI GATC 2 cut(s) 554, 926
MbiI CCGCTC 1 cut(s) 62
MboI GATC 2 cut(s) 552, 924
MfeI CAATTG 5 cut(s) 613, 1079, 1157, 1256, 1276
MluCI AATT 8 cut(s) 105, 613, 716, 1079, 1100, 1157, 1256, 1276
MlyI GAGTC 3 cut(s) 179, 254, 886
MmeI TCCRAC 2 cut(s) 339, 387
Mph1103I ATGCAT 1 cut(s) 471
MseI TTAA 2 cut(s) 303, 1074
MspA1I CMGCKG 1 cut(s) 1126
MssI GTTTAAAC 1 cut(s) 1075
MunI CAATTG 5 cut(s) 613, 1079, 1157, 1256, 1276
Mva1269I GAATGC 2 cut(s) 1180, 1205
MvnI CGCG 3 cut(s) 23, 507, 988
MwoI GCNNNNNNNGC 5 cut(s) 513, 739, 985, 1145, 1209
NdeII GATC 2 cut(s) 552, 924
NheI GCTAGC 1 cut(s) 1004
NlaIII CATG 9 cut(s) 13, 103, 178, 406, 559, 875, 979, 1212, 1221
NlaIV GGNNCC 1 cut(s) 1036
NmeAIII GCCGAG 2 cut(s) 136, 1115
NmuCI GTSAC 3 cut(s) 13, 179, 799
NsiI ATGCAT 1 cut(s) 471
NspI RCATGY 5 cut(s) 103, 406, 979, 1212, 1221
NspV TTCGAA 1 cut(s) 1187
PaeI GCATGC 1 cut(s) 979
PaeR7I CTCGAG 1 cut(s) 890
PagI TCATGA 1 cut(s) 555
PceI AGGCCT 1 cut(s) 235
PciSI GCTCTTC 1 cut(s) 30
PctI GAATGC 2 cut(s) 1180, 1205
PfeI GAWTC 2 cut(s) 386, 579
PkrI GCNGC 6 cut(s) 209, 852, 1125, 1128, 1164, 1272
PleI GAGTC 3 cut(s) 178, 253, 885
PmeI GTTTAAAC 1 cut(s) 1075
PpsI GAGTC 3 cut(s) 178, 253, 885
PspN4I GGNNCC 1 cut(s) 1036
PvuII CAGCTG 1 cut(s) 1126
RsaI GTAC 2 cut(s) 657, 939
RsaNI GTAC 2 cut(s) 656, 938
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 2 cut(s) 303, 1074
SatI GCNGC 6 cut(s) 208, 851, 1124, 1127, 1163, 1271
Sau3AI GATC 2 cut(s) 552, 924
SchI GAGTC 3 cut(s) 179, 254, 886
SfaNI GCATC 1 cut(s) 478
Sfr274I CTCGAG 1 cut(s) 890
SfuI TTCGAA 1 cut(s) 1187
SlaI CTCGAG 1 cut(s) 890
SmlI CTYRAG 1 cut(s) 890
SmoI CTYRAG 1 cut(s) 890
SphI GCATGC 1 cut(s) 979
Sse9I AATT 8 cut(s) 105, 613, 716, 1079, 1100, 1157, 1256, 1276
SseBI AGGCCT 1 cut(s) 235
SsiI CCGC 4 cut(s) 62, 850, 962, 1271
SspI AATATT 1 cut(s) 1043
SspMI CTAG 4 cut(s) 383, 473, 521, 1005
StuI AGGCCT 1 cut(s) 235
TaaI ACNGT 2 cut(s) 85, 256
TaiI ACGT 2 cut(s) 396, 1147
TaqI TCGA 7 cut(s) 129, 248, 582, 805, 883, 891, 1187
TasI AATT 8 cut(s) 105, 613, 716, 1079, 1100, 1157, 1256, 1276
TatI WGTACW 1 cut(s) 937
TauI GCSGC 2 cut(s) 853, 1273
TfiI GAWTC 2 cut(s) 386, 579
Tru1I TTAA 2 cut(s) 303, 1074
Tru9I TTAA 2 cut(s) 303, 1074
TseFI GTSAC 3 cut(s) 13, 179, 799
TseI GCWGC 4 cut(s) 207, 1123, 1126, 1162
Tsp45I GTSAC 3 cut(s) 13, 179, 799
TspDTI ATGAA 9 cut(s) 156, 491, 572, 618, 686, 1041, 1080, 1212, 1260
TspGWI ACGGA 1 cut(s) 1256
XagI CCTNNNNNAGG 1 cut(s) 331
XapI RAATTY 1 cut(s) 1100
XceI RCATGY 5 cut(s) 103, 406, 979, 1212, 1221
XhoI CTCGAG 1 cut(s) 890
XspI CTAG 4 cut(s) 383, 473, 521, 1005
Zsp2I ATGCAT 1 cut(s) 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.