pycom01g03260

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2557564 .. 2564623
7060 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g03260.31

Sequence Viewer

Length: 5583 bp
ATGATGTGCATGTGTGAGAATGCATGTGGAATTAAGAGGAGTATGGAAGTGTTTAAAGGGCTAGGGTTTAAGTACATAGAATGGAGCCATTGTTTTGTGTCTTCAAGTGCATACAAGGCCTTCAAATTCGTCCATTCTCTTGGCTCCATGGATAAGCTATCCAATCCATGCCCAAAAATGCTCCAAATGGCCTCAAAATGCACTTTCTTGCTCCCTAGGCCCTTAGAACCTGAAAACACACAAAAGAAAACAAGCCATTTAAGTCGCATGAATATGCTCCTATCAGTAGGCTTGGTAGTTTTTAAGGTCAACAGTTTGGCATGCCTAGTGGGACATAATGCTAAAACTACGAAGTCCATGACCATTGAGACACAGTCGGTAAAGAAGAAAATAGTCATGGGAAAGTCAACGACTAGTCTTCCACCTCATGCTGCCATGACACCTGAAGCCACAAGTGCTACATGCCGAGAAAAGGAAGCTAATCTTGGCGGCCAGCCCCGTGATGCAGAAATCCCTATCAAAACAACAAAAGGCTTTTTTGTTGAAAGATTAGTGGAAGATTGTGATGAAAACGGTGGTGAGGCCTTTGATCCACCATCTTGGTCGTTTCTTCGACGACGATTTGAAGAGCAATCTCGGCAATTCGAACAAATATTTAGCCGAAAGATAAAAAGCATACTCGAAGAGACGTGCGATAATAGTGCTATACATACCAGGTTGCTCAAACTACTGGTTAATAAAGCCCATGAAGGTGGACCCGTCGATCGTTCACGACAACCTATGCTTAAGAATAATCCACTGCCAGCGATACAAGCTGAGATAGGATCTGCTCAGGTCAAAATGATTAACTTGGAGAAAAATGGAGAATCAACCAACAGATCGAATGAATTTGAGATTAATTTGGTCCTACAAAAGGGGCTGAAGTTTCCGAAATTCATTCACCCATATCCAACATTCGTAGAAAAGTTCAAGTACCCCAAGGGATTCAAAATTCCAGACTTTAACCTTTTCACTAGAGAGTCATCCCTATTGTCGTTAGAACACGTGGCTCGATTCACTGCCCAATATGGGGATGTTAATAGTGATTTCCATAAGCTTCGACTGTTCAATTTCTTGTTAATCGGCTCAGCATTTATGTGGTATATAAACCTTCCACCCAACTCTATCCAAAGTTGGGAAGAACTAGTCGAGAAATTTCATGAAGAATTCTATCAACCAGGGATGGACGTGTTAGTATCTTCTTTGGCCAGGATGGTTCAAGCTTCTGACGAGTCGCCGATGGTGCCGAGTACCTCTCCTGGAAGTCGAACATGTACGAACTGGCTCAACATATCGAGCAATATGATTATTTGCTCTGAGGAGAAAAGATCTCAAAGTCCCCATCTCGAGGAACGATCTATAAGAACCCTACAGTCAGTTATGCATCGACCGAAAATGAAGAATCCTAAATACATATGCAAAACATTAGTTCATCCTAACTCTAAGGATGCCAAAACCCGCTCGGCCTCTGAAGAAGCTACCATCAAAACATCGAAAGTTTATACTTTTGACATCTTCGAACAATTATTGCTTGCGAAAATTGTCAAGCTTCGGCCAGGGCATAACATTCCTAAGGCTGATGATTTAAAAGGAAAGACATTGCCATTGAAAGCTAGATCGACAAATAATTCGAAGAAGCAAATAAGCGTTAAAACCGATCCTTTCCCTATGATGACAGTAAGCATGGTAGATGCTCATCTACCTAGGGATAAAGGAAAAGGAAAGGTCGAGTTCGTTCCAATTGATTTATTTTCAAATAAGCCACCCAAAGATTTGACGGGACTAGCTATTGTTGAATCAATGTCGGACTCCAGTGCAAAGGAAACTAATAAGCTAATGCCAAAAAAAAAGCCACGCCGGGTCGAAATACCTCACCAAGTGCCTATAGCTGCGGTAACATCCCAAAAGGTGCTTGGTACAGGCCAACGCCATAAAGTTTTTGATAGGCTTGGCCTTCAAGTACAAGATAACAAGCTATCTTCAGCCAGACGACGTCTTGATTTTGACGCGTCGTTTTACAATGATGATTATTATGTGCGCAACTTTGGCGATAATGCACAAACCAGTGCATCTTCAAACCTCCTAAGCCATGTGATCAGCGTTAGAATACCTACAACTCCCCTACCCGTATATATACTGCATTGTTTAAATCACATAAACATCACCACCAAAGAATGGACTGAAATAAAAGCTTACCTCAAGCATTTCTGGAAGCAGGTTGATAAGTTATATGGAATCTCCACCCACCATTCCTTAGTAAAGCTTTGGAATAAATTTGAGAGTTTCACAAGAAGCATTCGGCAAATGATTTATACGGCTTGCCGAAAGCGTGCCAAGATACTCTTGATCTCATTTGAACTAGGGATGAAAGCTAGGTTCCAGCATATACGAGAAGCTCGAGTTCTTGGCTTTGAGGTAGATCAATATACTAATATGGACGCTCGTTTTGAAGTCTTTTTAACTATCTCTCTCTTCGGCCTTACAGTCGATGAAAAAGAACAAGTAACACGATTAGATGCTTACCTTGACATGAGAGATGCCTACATCACATATCATGAGCAAACTCTAAATGTACCGCATGAACATACCCCAGCACCAGTCGAAGAAGATCAAGTAGATATTGCCCATTCACTGGATACCTTGCCCGAAGGTCCAGAGGAAAAAGATCACGACCCAATAGTTCATTCGATCCTCTACAACATGGAAATCAGCATGGTCCATATATTACCCGCCGAGTTCCAACCAACCACATCCCAACCAAATTTCCTGGATGGCAACGTGGTTGCCGAGGAAGCCATGCAAGTCGATTTTGTGGCCACCGAAGAGGTTGAGCTGGCAATAAAAGAAGATAAACTCAAAGCAGATCTTGATGAATTGTTTCCTCACTCTTCATCAATTAATCTCCATCATTTGAAGCCGTTATATGTTACGGCTCATATTGAAGGAGATTCAGTCTTTAAAATTTTCGTCGAGTGTGGAACAACGACCAGCATCATGCCCGTCACTATCATGAAGGCATTACATCATTCCAACAACGAACTTATTCCATCAGGGGTCACCATGAGCAATTTTGTCGGTGACAAATCCCAAACCAAGGGAATGCTTCCATTGGAGGTAAATATTAGAGGTCGTAATCACATGACCACATTTTTCATAGTCGATTCAAAGATCGATTGCATCCCCTCGTTATTATATCAAGTCCTCATTTTCTGGGACGGCAAATCGGTCGTGGTTCATCCGATCGACAATCAGTCGTTCAAAGCTAATATGATTCAGACTTGCTATTATGACGATCACCTCGACTACATCACCTTACAAGGTTTTAACGAGGAAGGACGACTGTTCACCAGGATTCGGCGAGACTTGGGTTGGCCGACCTTATTGCCGATCCTGATGTCTGATACCAAACAAGACAGGTGCTGGGTTATGGTTTTATCCACCATGGAACGACTGTTGGCCTATTGGCATGCTATTTCCAACTGCCCAGACCGAGCTCGAAGACAGTTAGCCCTAAGTGAAGGACCCTTTAGAGAAATAAATGTTAGAACGGCTGAAGACTCGCGACCTTTATTTATTAGTGCTTTGTTACCCCAGCCTGTGAAAACCGAGCTTTGTAATTTACTCAAGGAATTTAAGGATTGTTTTGCTTGGAGTTACCTGAAATGCCTGTTGAATTTGGCAACCCCTATAGATGAATATACAATGCCAATTTCAGATTTGTTAATCTATGCAGCAGTAAACCACGAGATGTTATCCTTCATGGATCGCCATGCCAGTTACAATCAAATTTTCATTGTTAAGGTCGATGTCCACAAAACTGCTTTTCGTTGCCCATGGGCACTTGGGACTTACGAATGGGTCGTCATGCCGTTCGGCCCTAAAAACGCCGGTGCCACATACCAACGCACTATGAATACTATTTTTCATGATTTAATTGGCACCGTCATTGAGGTATGTATTAATGATATTTGGCAAGCTTTCCTTCGTATGCGCCAACATAACCTTAAAATGAACCCTGCTAAGTGCACATTTGGTGTGTCGGTAGGCAACTTATTGGGTTTCCTTGTCAATCATCGTGGTATCGAGGTGGACACAAATAAAGCTCGAATGATCATTGATGCTCCACCCCCGACAACCAAGAAGCAATTACAATCATTACTCGGTAAAATCAATTTCCTCCGCCGTTTCATTTCTAATTCGGTAGGGAAAATGAAAGCTTTCTCCATGCACTTGAAACTTAAGGATTCTAACAAATTCAAATGGCATGAGGAGCACCAAGATGCCTTCACACAAATTAAGGTATCCCTCACTACCCCACTTGTGTTTGTGCCACCTCTACGCAATAAACCATTCAAGTTGTATATATTGGCCGTCGAGGAATCTGTCTTCTTGCACAAGATAATGACACGAGATAGGAACCTGCCATTTTTTATCTTAGCCAGAATCTTAACTACGACATTACATGCTCCATTATATTATGCAAGTCATTGCTCAAACAAACGTTATTCGCTATATGCTTACTCGTCTGATAGTGAAAGCCCGAATTGGAAAATAGACAATGGCACTATAAGTGATGGTCGATTTCTTAGCCCAACATCCCTCCCAATGCTGTTTTGGGGGCAACGACGTCAAAATTGGTATGGTGGAACACACATGATAATTATTAGACAATGTATTTTGACGGCTTTAGTACTTCGACCTCGGCTGATGTTGCGATCGTCATCCAATCCCCAGATTACTACTGATGACGAAGCCCTTATCATCTGCCTTAGCGCCCTTCATGACTTGAGGGCATCCTGCGTGCACGTCCTTGGCAATTCAGATTGTAGTCTGGCGCCCTATCACATGGTTGTCAGCTATTTGGCCGAATCGTTTGACGCAGACGAATTGCCTCAAATAGCCTTCGGAGCACAACTCCTAGGGGGCAAGCTAGACCGGCAACAAGTTTTCCAGCACGACCACGTGATCTGTACACGAGTTATGTCCCTACCTTCATTTACCGGACGGCTGGAGAAGGTTACAAATTACGTAATGTACAAGAATGAGTTATACCAAAAGGGTGAAGATGGTCTGTTGTTATTATGTCTTGGCCCGGAAGAGGTAGCTCAAACAACACAGAGGTACATGAAGGAATATGTGTGGCGCATCAATCCGGACGCAAAACGTGTTGGTTATTGCATTGAATATGCGCAAAGGTGTGTACAATGTCAAATCCATGGGCCTATACAGATAGTCCCAGGCATGGATGTAATCGACAAGGTCGCGCCGTCTTCCAAATCAGCAAAGCATGCATGGATACTCGTAGCAACTGACTACTTCACCAAGCAGGTCGAGGTGAAATTTTACGCTGAATTAACGTCTAAAGAAGTTTGTAAGTTTGTGGAAGAAAACATTGTAACCAGATTCGCGACAGGTTTAGAGAATACATTACCACAGGCAAATGGACAGGCCGAAACAAGTAATAAAGTTTTAATTGGTATCCTCAAAAAAATGATAAAAGAAAAGCCTGGGATGTGGCATTTGAAGTTAAACGAGGCATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1861

Amino Acids

212.18

Weight (kDa)

8.82

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 2035, 4669
Acc16I TGCGCA 2 cut(s) 2078, 5229
Acc36I ACCTGC 3 cut(s) 2245, 4467, 5356
AccB1I GGYRCC 4 cut(s) 1282, 3929, 3977, 4873
AccB7I CCANNNNNTGG 2 cut(s) 2214, 2671
AccBSI CCGCTC 1 cut(s) 1500
AccII CGCG 4 cut(s) 2048, 3601, 5303, 5447
AccIII TCCGGA 1 cut(s) 5191
AciI CCGC 6 cut(s) 489, 1498, 1931, 2615, 2769, 4219
AclI AACGTT 1 cut(s) 4540
AclWI GGATC 6 cut(s) 584, 832, 1691, 2722, 3421, 3810
AcoI YGGCCR 7 cut(s) 490, 1245, 1592, 2853, 3410, 4407, 4902
AcuI CTGAAG 5 cut(s) 465, 941, 1530, 2004, 3612
AcvI CACGTG 2 cut(s) 1045, 5002
AcyI GRCGYC 3 cut(s) 2032, 4666, 4874
AdeI CACNNNGTG 1 cut(s) 1918
AflII CTTAAG 2 cut(s) 785, 4277
AflIII ACRYGT 5 cut(s) 1042, 1227, 1310, 2046, 5203
AhdI GACNNNNNGTC 1 cut(s) 3289
AhlI ACTAGT 2 cut(s) 413, 1183
AjiI CACGTC 3 cut(s) 690, 1228, 4846
AjnI CCWGG 9 cut(s) 713, 1216, 1247, 1297, 1594, 2805, 3386, 5275, 5545
AjuI GAANNNNNNNTTGG 4 cut(s) 468, 500, 2707, 2739
Alw21I GWGCWC 5 cut(s) 3535, 4067, 4314, 4845, 4951
Alw26I GTCTC 3 cut(s) 362, 680, 3393
Alw44I GTGCAC 2 cut(s) 4063, 4841
AlwI GGATC 6 cut(s) 584, 832, 1691, 2722, 3421, 3810
AlwNI CAGNNNCTG 1 cut(s) 3459
Ama87I CYCGRG 2 cut(s) 1385, 2436
Aor13HI TCCGGA 1 cut(s) 5191
ApaLI GTGCAC 2 cut(s) 4063, 4841
ApeKI GCWGC 3 cut(s) 431, 1928, 3770
ArsI GACNNNNNNTTYG 6 cut(s) 1651, 1683, 2468, 2500, 3885, 3917
AseI ATTAAT 3 cut(s) 897, 2937, 3999
Asp700I GAANNNNTTC 3 cut(s) 2916, 3081, 4256
AspA2I CCTAGG 3 cut(s) 215, 1742, 4957
AspLEI GCGC 7 cut(s) 2079, 4032, 4814, 4876, 5184, 5230, 5305
AspS9I GGNCC 9 cut(s) 219, 755, 904, 2690, 2755, 3560, 3914, 5129, 5258
AsuC2I CCSGG 2 cut(s) 1898, 5132
AsuII TTCGAA 3 cut(s) 645, 1557, 1670
AvaI CYCGRG 2 cut(s) 1385, 2436
AvaII GGWCC 5 cut(s) 755, 904, 2690, 2755, 3560
AvrII CCTAGG 3 cut(s) 215, 1742, 4957
AxyI CCTNAGG 1 cut(s) 1611
BaeGI GKGCMC 3 cut(s) 3880, 4067, 4845
BalI TGGCCA 2 cut(s) 1247, 2855
BanI GGYRCC 4 cut(s) 1282, 3929, 3977, 4873
BanII GRGCYC 1 cut(s) 3535
BauI CACGAG 3 cut(s) 3782, 4446, 5013
BbrPI CACGTG 2 cut(s) 1045, 5002
BbsI GAAGAC 6 cut(s) 93, 410, 3544, 3600, 4417, 5301
Bbv12I GWGCWC 5 cut(s) 3535, 4067, 4314, 4845, 4951
BbvI GCAGC 3 cut(s) 418, 1915, 3782
BcgI CGANNNNNNTGC 8 cut(s) 683, 717, 3094, 3128, 3247, 3281, 3403, 3437
BciT130I CCWGG 9 cut(s) 715, 1218, 1249, 1299, 1596, 2807, 3388, 5277, 5547
BciVI GTATCC 4 cut(s) 2668, 4351, 5328, 5528
BclI TGATCA 2 cut(s) 2133, 4149
BcnI CCSGG 2 cut(s) 1898, 5132
BcoDI GTCTC 3 cut(s) 362, 680, 3393
BcuI ACTAGT 2 cut(s) 413, 1183
BfmI CTRYAG 3 cut(s) 1409, 1923, 3726
BfoI RGCGCY 2 cut(s) 4815, 4877
BfrI CTTAAG 2 cut(s) 785, 4277
BfuAI ACCTGC 3 cut(s) 2245, 4467, 5356
BfuI GTATCC 4 cut(s) 2668, 4351, 5328, 5528
BglII AGATCT 2 cut(s) 1367, 2902
BisI GCNGC 4 cut(s) 432, 490, 1929, 3771
BlnI CCTAGG 3 cut(s) 215, 1742, 4957
BlpI GCTNAGC 1 cut(s) 1126
BlsI GCNGC 4 cut(s) 433, 491, 1930, 3772
BmcAI AGTACT 1 cut(s) 4731
Bme18I GGWCC 5 cut(s) 755, 904, 2690, 2755, 3560
BmeRI GACNNNNNGTC 1 cut(s) 3289
BmeT110I CYCGRG 2 cut(s) 1385, 2436
BmgBI CACGTC 3 cut(s) 690, 1228, 4846
BmgT120I GGNCC 9 cut(s) 219, 755, 904, 2690, 2755, 3560, 3914, 5129, 5258
BpiI GAAGAC 6 cut(s) 93, 410, 3544, 3600, 4417, 5301
BplI GAGNNNNNCTC 4 cut(s) 1279, 1311, 4938, 4970
BpmI CTGGAG 2 cut(s) 1834, 5069
Bpu10I CCTNAGC 3 cut(s) 831, 2123, 4808
Bpu1102I GCTNAGC 1 cut(s) 1126
Bpu14I TTCGAA 3 cut(s) 645, 1557, 1670
BpuEI CTTGAG 3 cut(s) 2222, 3647, 4846
BpuMI CCSGG 2 cut(s) 1898, 5132
Bsa29I ATCGAT 1 cut(s) 3210
BsaAI YACGTR 3 cut(s) 1045, 5002, 5068
BsaBI GATNNNNATC 2 cut(s) 1734, 4759
BsaHI GRCGYC 3 cut(s) 2032, 4666, 4874
BsaWI WCCGGW 2 cut(s) 5039, 5191
BsaXI ACNNNNNCTCC 4 cut(s) 76, 106, 2976, 3006
Bse118I RCCGGY 2 cut(s) 3926, 4974
Bse1I ACTGG 7 cut(s) 735, 1325, 1851, 2103, 2636, 2676, 3813
Bse21I CCTNAGG 1 cut(s) 1611
Bse3DI GCAATG 2 cut(s) 1637, 4525
Bse8I GATNNNNATC 2 cut(s) 1734, 4759
BseAI TCCGGA 1 cut(s) 5191
BseBI CCWGG 9 cut(s) 715, 1218, 1249, 1299, 1596, 2807, 3388, 5277, 5547
BseCI ATCGAT 1 cut(s) 3210
BseJI GATNNNNATC 2 cut(s) 1734, 4759
BseMI GCAATG 2 cut(s) 1637, 4525
BseMII CTCAG 4 cut(s) 807, 845, 1140, 1347
BseNI ACTGG 7 cut(s) 735, 1325, 1851, 2103, 2636, 2676, 3813
BseRI GAGGAG 3 cut(s) 52, 1373, 4322
BseSI GKGCMC 3 cut(s) 3880, 4067, 4845
BseXI GCAGC 3 cut(s) 418, 1915, 3782
BseYI CCCAGC 3 cut(s) 2629, 3459, 3630
Bsh1236I CGCG 4 cut(s) 2048, 3601, 5303, 5447
Bsh1285I CGRYCG 5 cut(s) 766, 1430, 3267, 3282, 4757
BshNI GGYRCC 4 cut(s) 1282, 3929, 3977, 4873
BshVI ATCGAT 1 cut(s) 3210
BsiEI CGRYCG 5 cut(s) 766, 1430, 3267, 3282, 4757
BsiHKAI GWGCWC 5 cut(s) 3535, 4067, 4314, 4845, 4951
BsiHKCI CYCGRG 2 cut(s) 1385, 2436
BsiSI CCGG 6 cut(s) 1897, 3927, 4975, 5040, 5132, 5192
BslFI GGGAC 7 cut(s) 345, 1362, 1833, 3266, 3898, 5008, 5258
BsmAI GTCTC 3 cut(s) 362, 680, 3393
BsmBI CGTCTC 1 cut(s) 680
BsmFI GGGAC 7 cut(s) 345, 1362, 1833, 3266, 3898, 5008, 5258
BsmI GAATGC 3 cut(s) 25, 2334, 3144
BsoBI CYCGRG 2 cut(s) 1385, 2436
Bsp119I TTCGAA 3 cut(s) 645, 1557, 1670
Bsp1286I GDGCHC 6 cut(s) 3535, 3880, 4067, 4314, 4845, 4951
Bsp13I TCCGGA 1 cut(s) 5191
Bsp1407I TGTACA 3 cut(s) 5009, 5073, 5239
Bsp1720I GCTNAGC 1 cut(s) 1126
Bsp19I CCATGG 4 cut(s) 147, 3480, 3872, 5254
Bsp68I TCGCGA 2 cut(s) 3601, 5447
BspACI CCGC 6 cut(s) 489, 1498, 1931, 2615, 2769, 4219
BspCNI CTCAG 4 cut(s) 808, 844, 1139, 1348
BspDI ATCGAT 1 cut(s) 3210
BspEI TCCGGA 1 cut(s) 5191
BspFNI CGCG 4 cut(s) 2048, 3601, 5303, 5447
BspHI TCATGA 5 cut(s) 1198, 2593, 3048, 3964, 4819
BspMI ACCTGC 3 cut(s) 2245, 4467, 5356
BspPI GGATC 6 cut(s) 584, 832, 1691, 2722, 3421, 3810
BspQI GCTCTTC 1 cut(s) 621
BspT104I TTCGAA 3 cut(s) 645, 1557, 1670
BspT107I GGYRCC 4 cut(s) 1282, 3929, 3977, 4873
BspTI CTTAAG 2 cut(s) 785, 4277
BsrBI CCGCTC 1 cut(s) 1500
BsrDI GCAATG 2 cut(s) 1637, 4525
BsrFI RCCGGY 2 cut(s) 3926, 4974
BsrGI TGTACA 3 cut(s) 5009, 5073, 5239
BsrI ACTGG 7 cut(s) 735, 1325, 1851, 2103, 2636, 2676, 3813
BssAI RCCGGY 2 cut(s) 3926, 4974
BssNI GRCGYC 3 cut(s) 2032, 4666, 4874
BssSI CACGAG 3 cut(s) 3782, 4446, 5013
Bst2BI CACGAG 3 cut(s) 3782, 4446, 5013
Bst2UI CCWGG 9 cut(s) 715, 1218, 1249, 1299, 1596, 2807, 3388, 5277, 5547
Bst6I CTCTTC 6 cut(s) 621, 678, 2516, 2856, 2932, 5130
BstACI GRCGYC 3 cut(s) 2032, 4666, 4874
BstAFI CTTAAG 2 cut(s) 785, 4277
BstAPI GCANNNNNTGC 1 cut(s) 5327
BstAUI TGTACA 3 cut(s) 5009, 5073, 5239
BstBAI YACGTR 3 cut(s) 1045, 5002, 5068
BstBI TTCGAA 3 cut(s) 645, 1557, 1670
BstDSI CCRYGG 4 cut(s) 147, 3480, 3872, 5254
BstEII GGTNACC 1 cut(s) 3094
BstENI CCTNNNNNAGG 1 cut(s) 911
BstFNI CGCG 4 cut(s) 2048, 3601, 5303, 5447
BstH2I RGCGCY 2 cut(s) 4815, 4877
BstHHI GCGC 7 cut(s) 2079, 4032, 4814, 4876, 5184, 5230, 5305
BstMAI GTCTC 3 cut(s) 362, 680, 3393
BstMCI CGRYCG 5 cut(s) 766, 1430, 3267, 3282, 4757
BstNI CCWGG 9 cut(s) 715, 1218, 1249, 1299, 1596, 2807, 3388, 5277, 5547
BstNSI RCATGY 8 cut(s) 13, 27, 324, 465, 1314, 3509, 4505, 5330
BstPI GGTNACC 1 cut(s) 3094
BstSFI CTRYAG 3 cut(s) 1409, 1923, 3726
BstSLI GKGCMC 3 cut(s) 3880, 4067, 4845
BstSNI TACGTA 1 cut(s) 5068
BstUI CGCG 4 cut(s) 2048, 3601, 5303, 5447
BstV1I GCAGC 3 cut(s) 418, 1915, 3782
BstV2I GAAGAC 6 cut(s) 93, 410, 3544, 3600, 4417, 5301
BstX2I RGATCY 3 cut(s) 824, 1367, 2902
BstXI CCANNNNNNTGG 3 cut(s) 140, 600, 752
BstYI RGATCY 3 cut(s) 824, 1367, 2902
Bsu15I ATCGAT 1 cut(s) 3210
Bsu36I CCTNAGG 1 cut(s) 1611
BsuI GTATCC 4 cut(s) 2668, 4351, 5328, 5528
BsuTUI ATCGAT 1 cut(s) 3210
BtgI CCRYGG 4 cut(s) 147, 3480, 3872, 5254
BtrI CACGTC 3 cut(s) 690, 1228, 4846
BtsI GCAGTG 2 cut(s) 797, 1056
BtsIMutI CAGTG 5 cut(s) 797, 1056, 1858, 2110, 2669
BtuMI TCGCGA 2 cut(s) 3601, 5447
BveI ACCTGC 3 cut(s) 2245, 4467, 5356
CaiI CAGNNNCTG 1 cut(s) 3459
CciI TCATGA 5 cut(s) 1198, 2593, 3048, 3964, 4819
CfoI GCGC 7 cut(s) 2079, 4032, 4814, 4876, 5184, 5230, 5305
Cfr10I RCCGGY 2 cut(s) 3926, 4974
Cfr13I GGNCC 9 cut(s) 219, 755, 904, 2690, 2755, 3560, 3914, 5129, 5258
ClaI ATCGAT 1 cut(s) 3210
CseI GACGC 5 cut(s) 2037, 2054, 2486, 4925, 5204
CsiI ACCWGGT 1 cut(s) 713
CspCI CAANNNNNGTGG 2 cut(s) 4096, 4131
DinI GGCGCC 1 cut(s) 4875
DraI TTTAAA 4 cut(s) 55, 1626, 2187, 2998
DraIII CACNNNGTG 1 cut(s) 1918
DriI GACNNNNNGTC 1 cut(s) 3289
EaeI YGGCCR 7 cut(s) 490, 1245, 1592, 2853, 3410, 4407, 4902
Eam1104I CTCTTC 6 cut(s) 621, 678, 2516, 2856, 2932, 5130
Eam1105I GACNNNNNGTC 1 cut(s) 3289
EarI CTCTTC 6 cut(s) 621, 678, 2516, 2856, 2932, 5130
EciI GGCGGA 1 cut(s) 4208
Ecl136II GAGCTC 1 cut(s) 3533
Eco105I TACGTA 1 cut(s) 5068
Eco147I AGGCCT 2 cut(s) 119, 584
Eco24I GRGCYC 1 cut(s) 3535
Eco47I GGWCC 5 cut(s) 755, 904, 2690, 2755, 3560
Eco53kI GAGCTC 1 cut(s) 3533
Eco57I CTGAAG 5 cut(s) 465, 941, 1530, 2004, 3612
Eco72I CACGTG 2 cut(s) 1045, 5002
Eco81I CCTNAGG 1 cut(s) 1611
Eco88I CYCGRG 2 cut(s) 1385, 2436
Eco91I GGTNACC 1 cut(s) 3094
EcoICRI GAGCTC 1 cut(s) 3533
EcoNI CCTNNNNNAGG 1 cut(s) 911
EcoO109I RGGNCCY 2 cut(s) 219, 3560
EcoO65I GGTNACC 1 cut(s) 3094
EcoRI GAATTC 1 cut(s) 1205
EcoRII CCWGG 9 cut(s) 713, 1216, 1247, 1297, 1594, 2805, 3386, 5275, 5545
EcoT22I ATGCAT 3 cut(s) 25, 1425, 5332
EcoT38I GRGCYC 1 cut(s) 3535
EgeI GGCGCC 1 cut(s) 4875
EheI GGCGCC 1 cut(s) 4875
Esp3I CGTCTC 1 cut(s) 680
FalI AAGNNNNNCTT 8 cut(s) 468, 500, 2366, 2398, 2889, 2921, 4005, 4037
FaqI GGGAC 7 cut(s) 345, 1362, 1833, 3266, 3898, 5008, 5258
FauI CCCGC 2 cut(s) 1505, 2776
FauNDI CATATG 1 cut(s) 1454
FbaI TGATCA 2 cut(s) 2133, 4149
Fnu4HI GCNGC 4 cut(s) 432, 490, 1929, 3771
FriOI GRGCYC 1 cut(s) 3535
Fsp4HI GCNGC 4 cut(s) 432, 490, 1929, 3771
FspI TGCGCA 2 cut(s) 2078, 5229
GlaI GCGC 7 cut(s) 2078, 4031, 4813, 4875, 5183, 5229, 5304
GluI GCNGC 4 cut(s) 432, 490, 1929, 3771
GsaI CCCAGC 3 cut(s) 2633, 3463, 3634
GsuI CTGGAG 2 cut(s) 1834, 5069
HaeII RGCGCY 2 cut(s) 4815, 4877
HapII CCGG 6 cut(s) 1897, 3927, 4975, 5040, 5132, 5192
HgaI GACGC 5 cut(s) 2037, 2054, 2486, 4925, 5204
HhaI GCGC 7 cut(s) 2079, 4032, 4814, 4876, 5184, 5230, 5305
Hin1I GRCGYC 3 cut(s) 2032, 4666, 4874
Hin6I GCGC 7 cut(s) 2077, 4030, 4812, 4874, 5182, 5228, 5303
HinP1I GCGC 7 cut(s) 2077, 4030, 4812, 4874, 5182, 5228, 5303
HincII GTYRAC 2 cut(s) 310, 408
HindII GTYRAC 2 cut(s) 310, 408
HindIII AAGCTT 7 cut(s) 1094, 1260, 1586, 2229, 2300, 4014, 4254
HpaII CCGG 6 cut(s) 1897, 3927, 4975, 5040, 5132, 5192
Hpy99I CGWCG 8 cut(s) 618, 621, 764, 2034, 2053, 3011, 4415, 4668
Hsp92I GRCGYC 3 cut(s) 2032, 4666, 4874
HspAI GCGC 7 cut(s) 2077, 4030, 4812, 4874, 5182, 5228, 5303
KasI GGCGCC 1 cut(s) 4873
Kpn2I TCCGGA 1 cut(s) 5191
Ksp22I TGATCA 2 cut(s) 2133, 4149
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 9 cut(s) 84, 149, 186, 216, 282, 4165, 4309, 4510, 4946
Lsp1109I GCAGC 3 cut(s) 418, 1915, 3782
MabI ACCWGGT 1 cut(s) 713
MbiI CCGCTC 1 cut(s) 1500
MfeI CAATTG 1 cut(s) 1779
MflI RGATCY 3 cut(s) 824, 1367, 2902
MhlI GDGCHC 6 cut(s) 3535, 3880, 4067, 4314, 4845, 4951
MlsI TGGCCA 2 cut(s) 1247, 2855
MluI ACGCGT 1 cut(s) 2046
MluNI TGGCCA 2 cut(s) 1247, 2855
Mly113I GGCGCC 1 cut(s) 4874
MlyI GAGTC 4 cut(s) 1028, 1280, 1841, 3590
MmeI TCCRAC 5 cut(s) 974, 1824, 2803, 3093, 3540
Mox20I TGGCCA 2 cut(s) 1247, 2855
Mph1103I ATGCAT 3 cut(s) 25, 1425, 5332
MroI TCCGGA 1 cut(s) 5191
MroXI GAANNNNTTC 3 cut(s) 2916, 3081, 4256
MscI TGGCCA 2 cut(s) 1247, 2855
MslI CAYNNNNRTG 5 cut(s) 272, 750, 1135, 3047, 4317
Msp20I TGGCCA 2 cut(s) 1247, 2855
MspCI CTTAAG 2 cut(s) 785, 4277
MspI CCGG 6 cut(s) 1897, 3927, 4975, 5040, 5132, 5192
MunI CAATTG 1 cut(s) 1779
Mva1269I GAATGC 3 cut(s) 25, 2334, 3144
MvaI CCWGG 9 cut(s) 715, 1218, 1249, 1299, 1596, 2807, 3388, 5277, 5547
MvnI CGCG 4 cut(s) 2048, 3601, 5303, 5447
NarI GGCGCC 1 cut(s) 4874
NciI CCSGG 2 cut(s) 1898, 5132
NcoI CCATGG 4 cut(s) 147, 3480, 3872, 5254
NdeI CATATG 1 cut(s) 1454
NmeAIII GCCGAG 7 cut(s) 491, 616, 1311, 1481, 2797, 2851, 4720
NmuCI GTSAC 3 cut(s) 3040, 3094, 3116
NruI TCGCGA 2 cut(s) 3601, 5447
NsbI TGCGCA 2 cut(s) 2078, 5229
NsiI ATGCAT 3 cut(s) 25, 1425, 5332
NspI RCATGY 8 cut(s) 13, 27, 324, 465, 1314, 3509, 4505, 5330
NspV TTCGAA 3 cut(s) 645, 1557, 1670
PaeI GCATGC 3 cut(s) 324, 3509, 5330
PaeR7I CTCGAG 2 cut(s) 1385, 2436
PagI TCATGA 5 cut(s) 1198, 2593, 3048, 3964, 4819
PceI AGGCCT 2 cut(s) 119, 584
PciI ACATGT 1 cut(s) 1310
PciSI GCTCTTC 1 cut(s) 621
PcsI WCGNNNNNNNCGW 4 cut(s) 2434, 2823, 3336, 3897
PctI GAATGC 3 cut(s) 25, 2334, 3144
PdmI GAANNNNTTC 3 cut(s) 2916, 3081, 4256
PflFI GACNNNGTC 3 cut(s) 373, 2031, 5297
PflMI CCANNNNNTGG 2 cut(s) 2214, 2671
PfoI TCCNGGA 2 cut(s) 1297, 2805
PkrI GCNGC 4 cut(s) 433, 491, 1930, 3772
Ple19I CGATCG 3 cut(s) 766, 3282, 4757
PleI GAGTC 4 cut(s) 1027, 1279, 1841, 3590
PluTI GGCGCC 1 cut(s) 4877
PmaCI CACGTG 2 cut(s) 1045, 5002
PmlI CACGTG 2 cut(s) 1045, 5002
PpsI GAGTC 4 cut(s) 1027, 1279, 1841, 3590
Ppu21I YACGTR 3 cut(s) 1045, 5002, 5068
PpuMI RGGWCCY 1 cut(s) 3560
PscI ACATGT 1 cut(s) 1310
PshBI ATTAAT 3 cut(s) 897, 2937, 3999
Psp124BI GAGCTC 1 cut(s) 3535
Psp1406I AACGTT 1 cut(s) 4540
Psp5II RGGWCCY 1 cut(s) 3560
Psp6I CCWGG 9 cut(s) 713, 1216, 1247, 1297, 1594, 2805, 3386, 5275, 5545
PspCI CACGTG 2 cut(s) 1045, 5002
PspEI GGTNACC 1 cut(s) 3094
PspFI CCCAGC 3 cut(s) 2629, 3459, 3630
PspGI CCWGG 9 cut(s) 713, 1216, 1247, 1297, 1594, 2805, 3386, 5275, 5545
PspPI GGNCC 9 cut(s) 219, 755, 904, 2690, 2755, 3560, 3914, 5129, 5258
PspPPI RGGWCCY 1 cut(s) 3560
PspXI VCTCGAGB 1 cut(s) 2436
PstNI CAGNNNCTG 1 cut(s) 3459
PsuI RGATCY 3 cut(s) 824, 1367, 2902
PsyI GACNNNGTC 3 cut(s) 373, 2031, 5297
PvuI CGATCG 3 cut(s) 766, 3282, 4757
RruI TCGCGA 2 cut(s) 3601, 5447
RseI CAYNNNNRTG 5 cut(s) 272, 750, 1135, 3047, 4317
SacI GAGCTC 1 cut(s) 3535
SapI GCTCTTC 1 cut(s) 621
SatI GCNGC 4 cut(s) 432, 490, 1929, 3771
Sau96I GGNCC 9 cut(s) 219, 755, 904, 2690, 2755, 3560, 3914, 5129, 5258
ScaI AGTACT 1 cut(s) 4731
SchI GAGTC 4 cut(s) 1028, 1280, 1841, 3590
SduI GDGCHC 6 cut(s) 3535, 3880, 4067, 4314, 4845, 4951
SexAI ACCWGGT 1 cut(s) 713
SfcI CTRYAG 3 cut(s) 1409, 1923, 3726
SfoI GGCGCC 1 cut(s) 4875
Sfr274I CTCGAG 2 cut(s) 1385, 2436
SfuI TTCGAA 3 cut(s) 645, 1557, 1670
SgrAI CRCCGGYG 1 cut(s) 3926
SinI GGWCC 5 cut(s) 755, 904, 2690, 2755, 3560
SlaI CTCGAG 2 cut(s) 1385, 2436
SmiMI CAYNNNNRTG 5 cut(s) 272, 750, 1135, 3047, 4317
SmlI CTYRAG 7 cut(s) 785, 1385, 2237, 2436, 3662, 4277, 4825
SmoI CTYRAG 7 cut(s) 785, 1385, 2237, 2436, 3662, 4277, 4825
SnaBI TACGTA 1 cut(s) 5068
SpeI ACTAGT 2 cut(s) 413, 1183
SphI GCATGC 3 cut(s) 324, 3509, 5330
SseBI AGGCCT 2 cut(s) 119, 584
SsiI CCGC 6 cut(s) 489, 1498, 1931, 2615, 2769, 4219
SspDI GGCGCC 1 cut(s) 4873
SspI AATATT 2 cut(s) 654, 3160
SstI GAGCTC 1 cut(s) 3535
StuI AGGCCT 2 cut(s) 119, 584
TaqII GACCGA 3 cut(s) 1444, 3253, 3543
TatI WGTACW 6 cut(s) 72, 1999, 4729, 5009, 5073, 5239
TauI GCSGC 1 cut(s) 492
TscAI CASTG 5 cut(s) 804, 1063, 1858, 2110, 2676
TseFI GTSAC 3 cut(s) 3040, 3094, 3116
TseI GCWGC 3 cut(s) 431, 1928, 3770
Tsp45I GTSAC 3 cut(s) 3040, 3094, 3116
TspRI CASTG 5 cut(s) 804, 1063, 1858, 2110, 2676
Tth111I GACNNNGTC 3 cut(s) 373, 2031, 5297
Van91I CCANNNNNTGG 2 cut(s) 2214, 2671
Vha464I CTTAAG 2 cut(s) 785, 4277
VneI GTGCAC 2 cut(s) 4063, 4841
VpaK11BI GGWCC 5 cut(s) 755, 904, 2690, 2755, 3560
VspI ATTAAT 3 cut(s) 897, 2937, 3999
XagI CCTNNNNNAGG 1 cut(s) 911
XceI RCATGY 8 cut(s) 13, 27, 324, 465, 1314, 3509, 4505, 5330
XcmI CCANNNNNNNNNTGG 2 cut(s) 1949, 4650
XhoI CTCGAG 2 cut(s) 1385, 2436
XmaJI CCTAGG 3 cut(s) 215, 1742, 4957
XmnI GAANNNNTTC 3 cut(s) 2916, 3081, 4256
ZraI GACGTC 2 cut(s) 2033, 4667
ZrmI AGTACT 1 cut(s) 4731
Zsp2I ATGCAT 3 cut(s) 25, 1425, 5332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.