transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 5 cut(s) | 46, 88, 187, 200, 260 |
| AcsI | RAATTY | 1 cut(s) | 239 |
| AcvI | CACGTG | 1 cut(s) | 145 |
| AfaI | GTAC | 1 cut(s) | 213 |
| AjnI | CCWGG | 1 cut(s) | 54 |
| AluBI | AGCT | 2 cut(s) | 121, 171 |
| AluI | AGCT | 2 cut(s) | 121, 171 |
| Alw21I | GWGCWC | 1 cut(s) | 123 |
| AlwI | GGATC | 5 cut(s) | 46, 88, 187, 200, 260 |
| ApoI | RAATTY | 1 cut(s) | 239 |
| AspA2I | CCTAGG | 1 cut(s) | 178 |
| AsuHPI | GGTGA | 3 cut(s) | 34, 128, 218 |
| AvrII | CCTAGG | 1 cut(s) | 178 |
| BamHI | GGATCC | 1 cut(s) | 192 |
| BanII | GRGCYC | 1 cut(s) | 123 |
| BbrPI | CACGTG | 1 cut(s) | 145 |
| BbsI | GAAGAC | 1 cut(s) | 190 |
| Bbv12I | GWGCWC | 1 cut(s) | 123 |
| BccI | CCATC | 1 cut(s) | 79 |
| BceAI | ACGGC | 1 cut(s) | 27 |
| BciT130I | CCWGG | 1 cut(s) | 56 |
| BfaI | CTAG | 1 cut(s) | 179 |
| BfmI | CTRYAG | 1 cut(s) | 166 |
| BlnI | CCTAGG | 1 cut(s) | 178 |
| Bme1390I | CCNGG | 1 cut(s) | 56 |
| BmiI | GGNNCC | 1 cut(s) | 194 |
| BmrFI | CCNGG | 1 cut(s) | 56 |
| BmsI | GCATC | 2 cut(s) | 24, 142 |
| BpiI | GAAGAC | 1 cut(s) | 190 |
| Bpu10I | CCTNAGC | 1 cut(s) | 38 |
| BsaAI | YACGTR | 1 cut(s) | 145 |
| BsaJI | CCNNGG | 5 cut(s) | 55, 67, 178, 188, 269 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 246, 276 |
| BseBI | CCWGG | 1 cut(s) | 56 |
| BseDI | CCNNGG | 5 cut(s) | 55, 67, 178, 188, 269 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 123 |
| Bsp143I | GATC | 4 cut(s) | 51, 93, 192, 265 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspLI | GGNNCC | 1 cut(s) | 194 |
| BspPI | GGATC | 5 cut(s) | 46, 88, 187, 200, 260 |
| BssECI | CCNNGG | 5 cut(s) | 55, 67, 178, 188, 269 |
| BssMI | GATC | 4 cut(s) | 51, 93, 192, 265 |
| BssT1I | CCWWGG | 4 cut(s) | 67, 178, 188, 269 |
| Bst2UI | CCWGG | 1 cut(s) | 56 |
| Bst4CI | ACNGT | 1 cut(s) | 216 |
| BstBAI | YACGTR | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 1 cut(s) | 38 |
| BstKTI | GATC | 4 cut(s) | 54, 96, 195, 268 |
| BstMBI | GATC | 4 cut(s) | 51, 93, 192, 265 |
| BstNI | CCWGG | 1 cut(s) | 56 |
| BstSCI | CCNGG | 1 cut(s) | 54 |
| BstSFI | CTRYAG | 1 cut(s) | 166 |
| BstV2I | GAAGAC | 1 cut(s) | 190 |
| BstX2I | RGATCY | 1 cut(s) | 192 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 203 |
| BstYI | RGATCY | 1 cut(s) | 192 |
| BtgZI | GCGATG | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 1 cut(s) | 173 |
| Csp6I | GTAC | 1 cut(s) | 212 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 3 cut(s) | 42, 121, 171 |
| CviKI_1 | RGCY | 3 cut(s) | 42, 121, 171 |
| CviQI | GTAC | 1 cut(s) | 212 |
| DdeI | CTNAG | 1 cut(s) | 38 |
| DpnI | GATC | 4 cut(s) | 53, 95, 194, 267 |
| DpnII | GATC | 4 cut(s) | 51, 93, 192, 265 |
| Ecl136II | GAGCTC | 1 cut(s) | 121 |
| Eco130I | CCWWGG | 4 cut(s) | 67, 178, 188, 269 |
| Eco24I | GRGCYC | 1 cut(s) | 123 |
| Eco53kI | GAGCTC | 1 cut(s) | 121 |
| Eco72I | CACGTG | 1 cut(s) | 145 |
| EcoICRI | GAGCTC | 1 cut(s) | 121 |
| EcoRII | CCWGG | 1 cut(s) | 54 |
| EcoT14I | CCWWGG | 4 cut(s) | 67, 178, 188, 269 |
| EcoT38I | GRGCYC | 1 cut(s) | 123 |
| ErhI | CCWWGG | 4 cut(s) | 67, 178, 188, 269 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 2 cut(s) | 8, 92 |
| FatI | CATG | 1 cut(s) | 90 |
| FriOI | GRGCYC | 1 cut(s) | 123 |
| FspBI | CTAG | 1 cut(s) | 179 |
| Hin1II | CATG | 1 cut(s) | 94 |
| HphI | GGTGA | 3 cut(s) | 34, 128, 218 |
| Hpy166II | GTNNAC | 1 cut(s) | 219 |
| Hpy188I | TCNGA | 1 cut(s) | 98 |
| Hpy8I | GTNNAC | 1 cut(s) | 219 |
| HpyAV | CCTTC | 3 cut(s) | 233, 245, 253 |
| HpyCH4III | ACNGT | 1 cut(s) | 216 |
| HpyCH4IV | ACGT | 1 cut(s) | 144 |
| HpyCH4V | TGCA | 1 cut(s) | 155 |
| HpyF3I | CTNAG | 1 cut(s) | 38 |
| HpySE526I | ACGT | 1 cut(s) | 144 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| Kzo9I | GATC | 4 cut(s) | 51, 93, 192, 265 |
| LmnI | GCTCC | 1 cut(s) | 180 |
| LpnPI | CCDG | 3 cut(s) | 41, 50, 68 |
| LweI | GCATC | 2 cut(s) | 24, 142 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MaeII | ACGT | 1 cut(s) | 144 |
| MalI | GATC | 4 cut(s) | 53, 95, 194, 267 |
| MboI | GATC | 4 cut(s) | 51, 93, 192, 265 |
| MboII | GAAGA | 1 cut(s) | 195 |
| MflI | RGATCY | 1 cut(s) | 192 |
| MhlI | GDGCHC | 1 cut(s) | 123 |
| MluCI | AATT | 1 cut(s) | 239 |
| MnlI | CCTC | 1 cut(s) | 65 |
| MseI | TTAA | 1 cut(s) | 63 |
| MslI | CAYNNNNRTG | 2 cut(s) | 20, 201 |
| MspR9I | CCNGG | 1 cut(s) | 56 |
| MvaI | CCWGG | 1 cut(s) | 56 |
| NdeII | GATC | 4 cut(s) | 51, 93, 192, 265 |
| NlaIII | CATG | 1 cut(s) | 94 |
| NlaIV | GGNNCC | 1 cut(s) | 194 |
| PmaCI | CACGTG | 1 cut(s) | 145 |
| PmlI | CACGTG | 1 cut(s) | 145 |
| Ppu21I | YACGTR | 1 cut(s) | 145 |
| Psp124BI | GAGCTC | 1 cut(s) | 123 |
| Psp6I | CCWGG | 1 cut(s) | 54 |
| PspCI | CACGTG | 1 cut(s) | 145 |
| PspGI | CCWGG | 1 cut(s) | 54 |
| PspN4I | GGNNCC | 1 cut(s) | 194 |
| PsuI | RGATCY | 1 cut(s) | 192 |
| RsaI | GTAC | 1 cut(s) | 213 |
| RsaNI | GTAC | 1 cut(s) | 212 |
| RseI | CAYNNNNRTG | 2 cut(s) | 20, 201 |
| SacI | GAGCTC | 1 cut(s) | 123 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| Sau3AI | GATC | 4 cut(s) | 51, 93, 192, 265 |
| ScrFI | CCNGG | 1 cut(s) | 56 |
| SduI | GDGCHC | 1 cut(s) | 123 |
| SetI | ASST | 7 cut(s) | 24, 123, 147, 173, 190, 264, 275 |
| SfaNI | GCATC | 2 cut(s) | 24, 142 |
| SfcI | CTRYAG | 1 cut(s) | 166 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 20, 201 |
| Sse9I | AATT | 1 cut(s) | 239 |
| SspMI | CTAG | 1 cut(s) | 179 |
| SstI | GAGCTC | 1 cut(s) | 123 |
| StyD4I | CCNGG | 1 cut(s) | 54 |
| StyI | CCWWGG | 4 cut(s) | 67, 178, 188, 269 |
| TaaI | ACNGT | 1 cut(s) | 216 |
| TaiI | ACGT | 1 cut(s) | 147 |
| TaqI | TCGA | 1 cut(s) | 264 |
| TasI | AATT | 1 cut(s) | 239 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| XapI | RAATTY | 1 cut(s) | 239 |
| XmaJI | CCTAGG | 1 cut(s) | 178 |
| XspI | CTAG | 1 cut(s) | 179 |