Rmu_sc0007355.1_g000001

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007355.1
OG0000128
Physical Location & Seq
Forward (+)
1 .. 2102
2102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007355.1_g000001.1.cds

Sequence Viewer

Length: 1447 bp
ctgtgacctgggggcgatcccgggctcgggcggtagcccgcctggctgtgtcttcgccggtcacccacttggtgagattcgatacctctggcggcgaaaagaaggggaatctccttttgcggaggcaaatgagcaagaacgtccgcaaaagttagatgagaaggacgtagaattgctaaaagaaacatcaaccataccgttgacgaagttgagcaacgcaactcccaccaagcagccgctaaaggggtttgtcaaaccgattcaaggcaagacagagcacgggacacttcctgacaaaagggcaaaggaaggattcgaccctaacgcttataagcttctaccaaaggctagatatggcttcagttcgtcaagcaaggaaggtggcgaaggcatccctggtaaaaaggtgcatgagcttaatgaatctcaaaggaggctgagagagcaaggatgcacagctgaccctgctaaagcaggtcttggttttgtaccaggcaaactaattaaaatttcaggaagaggaaaagttgcaaaggcaagcacgcaacacattagtgttgaactagtagaagaagaggctcaagaatctgaatctgcctctcgcgttttggcatttgatctcattcatcctaattctcaagttacggtgcctgaacaagtggatgaattggcgcctcgagtttctgtatttgatcatgtcgacacatcaacaagccgaatctcagttttcaatcgcattacccaaacgaccactcgaacttccgtgttcaataggctgtcatcttccgatgaaggaaataagacatctgagccagcccctcaaaagttggcacttgagaggatacaagcacccaaagagcaacaaaagaaaaagagaaagaggatcgacgaccaaggaaacgacaaagagaaccaaagtctcatcccgtcaagcatgaagcgacgctctgtgttaaaggtgagcccaagtgaacaactcaaagtgaaggagaacaccatcgtactcactggccaagtcggaacaggtaatattgatggtaataatgaagatgagattgttcagtccgcctatcatatcacagtagcagaagcagaggctttcgaagaagatgaccatgatcattccgaggatgaagtagatgaagctcctccagaacttgaagacggggggcaagctactgtcgacgagcttaaagagctcaatttgggaattgaggaagatccaagacctatcttcgtgagcacttcgctgagtcctgaagaagaaaatgaatactatgatctgctgattgagtataaagacgtctttgcatggatgtacaaagaaatgcctagccttgacccaaaggtagcggttcaccgtcttgcagttaaacctgaggctcgaccgatcaagcaaacacaacaacgctttcggacagaactccttcctcaaattgaagcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

481

Amino Acids

53.37

Weight (kDa)

5.28

Isoelectric Point (pI)

53.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 331
AatII GACGTC 1 cut(s) 1306
Acc36I ACCTGC 1 cut(s) 465
AccB1I GGYRCC 2 cut(s) 647, 671
AccI GTMKAC 2 cut(s) 700, 1183
AccII CGCG 1 cut(s) 604
AciI CCGC 8 cut(s) 31, 39, 92, 120, 144, 237, 1066, 1353
AclWI GGATC 3 cut(s) 11, 891, 1215
AcoI YGGCCR 1 cut(s) 1010
AcsI RAATTY 1 cut(s) 508
AcuI CTGAAG 2 cut(s) 344, 1279
AcyI GRCGYC 2 cut(s) 672, 1303
AdeI CACNNNGTG 1 cut(s) 72
AfaI GTAC 3 cut(s) 490, 1003, 1320
AfiI CCNNNNNNNGG 4 cut(s) 26, 27, 243, 264
AgsI TTSAA 6 cut(s) 264, 561, 731, 770, 1161, 1440
AhlI ACTAGT 1 cut(s) 563
AjnI CCWGG 4 cut(s) 7, 41, 395, 491
AleI CACNNNNGTG 1 cut(s) 553
AluBI AGCT 8 cut(s) 335, 416, 459, 1146, 1176, 1190, 1199, 1443
AluI AGCT 8 cut(s) 335, 416, 459, 1146, 1176, 1190, 1199, 1443
Alw21I GWGCWC 3 cut(s) 280, 1201, 1245
Alw26I GTCTC 1 cut(s) 924
AlwI GGATC 3 cut(s) 11, 891, 1215
Ama87I CYCGRG 3 cut(s) 20, 26, 676
AoxI GGCC 1 cut(s) 1010
ApeKI GCWGC 1 cut(s) 233
ApoI RAATTY 1 cut(s) 508
Asp700I GAANNNNTTC 1 cut(s) 1426
AspLEI GCGC 1 cut(s) 674
AsuC2I CCSGG 2 cut(s) 21, 22
AsuHPI GGTGA 4 cut(s) 54, 84, 971, 1350
AsuII TTCGAA 1 cut(s) 1102
AvaI CYCGRG 3 cut(s) 20, 26, 676
AxyI CCTNAGG 1 cut(s) 1378
BalI TGGCCA 1 cut(s) 1012
BanI GGYRCC 2 cut(s) 647, 671
BanII GRGCYC 3 cut(s) 27, 966, 1201
BbsI GAAGAC 2 cut(s) 44, 1168
Bbv12I GWGCWC 3 cut(s) 280, 1201, 1245
BbvI GCAGC 1 cut(s) 245
BccI CCATC 2 cut(s) 1005, 1029
BciT130I CCWGG 4 cut(s) 9, 43, 397, 493
BciVI GTATCC 1 cut(s) 835
BclI TGATCA 2 cut(s) 692, 1118
BcnI CCSGG 2 cut(s) 21, 22
BcoDI GTCTC 1 cut(s) 924
BcuI ACTAGT 1 cut(s) 563
BfaI CTAG 3 cut(s) 349, 564, 1333
BfoI RGCGCY 1 cut(s) 675
BfuAI ACCTGC 1 cut(s) 465
BfuI GTATCC 1 cut(s) 835
BglI GCCNNNNNGGC 1 cut(s) 43
BisI GCNGC 3 cut(s) 93, 234, 237
BlsI GCNGC 3 cut(s) 94, 235, 238
Bme1390I CCNGG 6 cut(s) 9, 21, 22, 43, 397, 493
BmeT110I CYCGRG 3 cut(s) 20, 26, 676
BmiI GGNNCC 2 cut(s) 649, 673
BmrFI CCNGG 6 cut(s) 9, 21, 22, 43, 397, 493
BmsI GCATC 2 cut(s) 400, 441
BpiI GAAGAC 2 cut(s) 44, 1168
BpmI CTGGAG 1 cut(s) 1135
Bpu14I TTCGAA 1 cut(s) 1102
BpuEI CTTGAG 3 cut(s) 565, 622, 855
BpuMI CCSGG 2 cut(s) 21, 22
BsaHI GRCGYC 2 cut(s) 672, 1303
BsaJI CCNNGG 5 cut(s) 8, 20, 395, 893, 1126
Bsc4I CCNNNNNNNGG 4 cut(s) 26, 27, 243, 264
Bse118I RCCGGY 1 cut(s) 57
Bse1I ACTGG 1 cut(s) 1013
Bse21I CCTNAGG 1 cut(s) 1378
BseBI CCWGG 4 cut(s) 9, 43, 397, 493
BseDI CCNNGG 5 cut(s) 8, 20, 395, 893, 1126
BseGI GGATG 7 cut(s) 391, 456, 626, 668, 922, 1136, 1321
BseLI CCNNNNNNNGG 4 cut(s) 26, 27, 243, 264
BseMII CTCAG 5 cut(s) 429, 736, 799, 1242, 1369
BseNI ACTGG 1 cut(s) 1013
BseRI GAGGAG 1 cut(s) 1138
BseXI GCAGC 1 cut(s) 245
Bsh1236I CGCG 1 cut(s) 604
Bsh1285I CGRYCG 1 cut(s) 1389
BshFI GGCC 1 cut(s) 1012
BshNI GGYRCC 2 cut(s) 647, 671
BsiEI CGRYCG 1 cut(s) 1389
BsiHKAI GWGCWC 3 cut(s) 280, 1201, 1245
BsiHKCI CYCGRG 3 cut(s) 20, 26, 676
BsiSI CCGG 2 cut(s) 21, 58
BslFI GGGAC 1 cut(s) 296
BslI CCNNNNNNNGG 4 cut(s) 26, 27, 243, 264
BsmAI GTCTC 1 cut(s) 924
BsmFI GGGAC 1 cut(s) 296
BsnI GGCC 1 cut(s) 1012
BsoBI CYCGRG 3 cut(s) 20, 26, 676
Bsp119I TTCGAA 1 cut(s) 1102
Bsp1286I GDGCHC 5 cut(s) 27, 280, 966, 1201, 1245
Bsp1407I TGTACA 1 cut(s) 1318
Bsp143I GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
BspACI CCGC 8 cut(s) 31, 39, 92, 120, 144, 237, 1066, 1353
BspANI GGCC 1 cut(s) 1012
BspCNI CTCAG 5 cut(s) 430, 735, 800, 1243, 1370
BspFNI CGCG 1 cut(s) 604
BspLI GGNNCC 2 cut(s) 649, 673
BspMI ACCTGC 1 cut(s) 465
BspPI GGATC 3 cut(s) 11, 891, 1215
BspT104I TTCGAA 1 cut(s) 1102
BspT107I GGYRCC 2 cut(s) 647, 671
BsrFI RCCGGY 1 cut(s) 57
BsrGI TGTACA 1 cut(s) 1318
BsrI ACTGG 1 cut(s) 1013
BssAI RCCGGY 1 cut(s) 57
BssECI CCNNGG 5 cut(s) 8, 20, 395, 893, 1126
BssMI GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
BssNI GRCGYC 2 cut(s) 672, 1303
BssT1I CCWWGG 1 cut(s) 893
Bst2UI CCWGG 4 cut(s) 9, 43, 397, 493
Bst4CI ACNGT 5 cut(s) 199, 647, 1082, 1181, 1362
Bst6I CTCTTC 2 cut(s) 512, 568
BstACI GRCGYC 2 cut(s) 672, 1303
BstAUI TGTACA 1 cut(s) 1318
BstBI TTCGAA 1 cut(s) 1102
BstC8I GCNNGC 5 cut(s) 39, 539, 543, 814, 1174
BstDEI CTNAG 5 cut(s) 438, 722, 808, 1251, 1378
BstEII GGTNACC 1 cut(s) 60
BstF5I GGATG 7 cut(s) 391, 456, 626, 668, 922, 1136, 1321
BstFNI CGCG 1 cut(s) 604
BstH2I RGCGCY 1 cut(s) 675
BstHHI GCGC 1 cut(s) 674
BstKTI GATC 8 cut(s) 19, 620, 695, 886, 1121, 1223, 1283, 1393
BstMAI GTCTC 1 cut(s) 924
BstMBI GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
BstMCI CGRYCG 1 cut(s) 1389
BstMWI GCNNNNNNNGC 4 cut(s) 43, 443, 465, 1196
BstNI CCWGG 4 cut(s) 9, 43, 397, 493
BstPI GGTNACC 1 cut(s) 60
BstSCI CCNGG 6 cut(s) 7, 19, 20, 41, 395, 491
BstUI CGCG 1 cut(s) 604
BstV1I GCAGC 1 cut(s) 245
BstV2I GAAGAC 2 cut(s) 44, 1168
BstX2I RGATCY 1 cut(s) 1220
BstYI RGATCY 1 cut(s) 1220
Bsu36I CCTNAGG 1 cut(s) 1378
BsuI GTATCC 1 cut(s) 835
BsuRI GGCC 1 cut(s) 1012
BtsCI GGATG 7 cut(s) 391, 456, 626, 668, 922, 1136, 1321
BtsIMutI CAGTG 1 cut(s) 1006
BveI ACCTGC 1 cut(s) 465
Cac8I GCNNGC 5 cut(s) 39, 539, 543, 814, 1174
CfoI GCGC 1 cut(s) 674
Cfr10I RCCGGY 1 cut(s) 57
Cfr9I CCCGGG 1 cut(s) 20
CseI GACGC 1 cut(s) 952
Csp6I GTAC 3 cut(s) 489, 1002, 1319
CspCI CAANNNNNGTGG 2 cut(s) 362, 397
CviAII CATG 5 cut(s) 411, 696, 935, 1116, 1312
CviQI GTAC 3 cut(s) 489, 1002, 1319
DdeI CTNAG 5 cut(s) 438, 722, 808, 1251, 1378
DinI GGCGCC 1 cut(s) 673
DpnI GATC 8 cut(s) 18, 619, 694, 885, 1120, 1222, 1282, 1392
DpnII GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
DraIII CACNNNGTG 1 cut(s) 72
EaeI YGGCCR 1 cut(s) 1010
Eam1104I CTCTTC 2 cut(s) 512, 568
EarI CTCTTC 2 cut(s) 512, 568
EciI GGCGGA 1 cut(s) 1055
Ecl136II GAGCTC 1 cut(s) 1199
Eco130I CCWWGG 1 cut(s) 893
Eco24I GRGCYC 3 cut(s) 27, 966, 1201
Eco53kI GAGCTC 1 cut(s) 1199
Eco57I CTGAAG 2 cut(s) 344, 1279
Eco81I CCTNAGG 1 cut(s) 1378
Eco88I CYCGRG 3 cut(s) 20, 26, 676
Eco91I GGTNACC 1 cut(s) 60
EcoICRI GAGCTC 1 cut(s) 1199
EcoO65I GGTNACC 1 cut(s) 60
EcoRII CCWGG 4 cut(s) 7, 41, 395, 491
EcoT14I CCWWGG 1 cut(s) 893
EcoT38I GRGCYC 3 cut(s) 27, 966, 1201
EgeI GGCGCC 1 cut(s) 673
EheI GGCGCC 1 cut(s) 673
ErhI CCWWGG 1 cut(s) 893
FaeI CATG 5 cut(s) 414, 699, 938, 1119, 1315
FalI AAGNNNNNCTT 2 cut(s) 463, 495
FaqI GGGAC 1 cut(s) 296
FatI CATG 5 cut(s) 410, 695, 934, 1115, 1311
FauI CCCGC 1 cut(s) 46
FbaI TGATCA 2 cut(s) 692, 1118
FblI GTMKAC 2 cut(s) 700, 1183
Fnu4HI GCNGC 3 cut(s) 93, 234, 237
FokI GGATG 7 cut(s) 378, 463, 613, 675, 909, 1143, 1328
FriOI GRGCYC 3 cut(s) 27, 966, 1201
Fsp4HI GCNGC 3 cut(s) 93, 234, 237
FspBI CTAG 3 cut(s) 349, 564, 1333
GlaI GCGC 1 cut(s) 673
GluI GCNGC 3 cut(s) 93, 234, 237
GsuI CTGGAG 1 cut(s) 1135
HaeII RGCGCY 1 cut(s) 675
HaeIII GGCC 1 cut(s) 1012
HapII CCGG 2 cut(s) 21, 58
HgaI GACGC 1 cut(s) 952
HhaI GCGC 1 cut(s) 674
Hin1I GRCGYC 2 cut(s) 672, 1303
Hin1II CATG 5 cut(s) 414, 699, 938, 1119, 1315
Hin6I GCGC 1 cut(s) 672
HinP1I GCGC 1 cut(s) 672
HincII GTYRAC 3 cut(s) 202, 701, 1184
HindII GTYRAC 3 cut(s) 202, 701, 1184
HindIII AAGCTT 2 cut(s) 333, 1441
HinfI GANTC 9 cut(s) 77, 108, 260, 313, 423, 585, 591, 718, 1253
HpaII CCGG 2 cut(s) 21, 58
HphI GGTGA 4 cut(s) 54, 84, 971, 1350
Hpy166II GTNNAC 5 cut(s) 202, 701, 972, 1184, 1358
Hpy188I TCNGA 6 cut(s) 590, 788, 809, 1020, 1127, 1417
Hpy188III TCNNGA 6 cut(s) 291, 514, 582, 1152, 1238, 1257
Hpy8I GTNNAC 5 cut(s) 202, 701, 972, 1184, 1358
Hpy99I CGWCG 3 cut(s) 891, 946, 1188
HpyAV CCTTC 8 cut(s) 96, 155, 303, 372, 381, 786, 980, 1437
HpyCH4III ACNGT 5 cut(s) 199, 647, 1082, 1181, 1362
HpyCH4IV ACGT 3 cut(s) 140, 166, 1303
HpyCH4V TGCA 5 cut(s) 410, 454, 531, 1311, 1368
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 443, 465, 1196
HpyF3I CTNAG 5 cut(s) 438, 722, 808, 1251, 1378
HpySE526I ACGT 3 cut(s) 140, 166, 1303
Hsp92I GRCGYC 2 cut(s) 672, 1303
Hsp92II CATG 5 cut(s) 414, 699, 938, 1119, 1315
HspAI GCGC 1 cut(s) 672
KasI GGCGCC 1 cut(s) 671
Ksp22I TGATCA 2 cut(s) 692, 1118
Kzo9I GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
LmnI GCTCC 1 cut(s) 1151
Lsp1109I GCAGC 1 cut(s) 245
LweI GCATC 2 cut(s) 400, 441
MaeI CTAG 3 cut(s) 349, 564, 1333
MaeII ACGT 3 cut(s) 140, 166, 1303
MaeIII GTNAC 3 cut(s) 3, 60, 641
MalI GATC 8 cut(s) 18, 619, 694, 885, 1120, 1222, 1282, 1392
MboI GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
MflI RGATCY 1 cut(s) 1220
MhlI GDGCHC 5 cut(s) 27, 280, 966, 1201, 1245
MlsI TGGCCA 1 cut(s) 1012
MluCI AATT 8 cut(s) 171, 502, 508, 632, 666, 1202, 1210, 1435
MluNI TGGCCA 1 cut(s) 1012
Mly113I GGCGCC 1 cut(s) 672
MlyI GAGTC 1 cut(s) 1262
MmeI TCCRAC 1 cut(s) 998
Mox20I TGGCCA 1 cut(s) 1012
MroXI GAANNNNTTC 1 cut(s) 1426
MscI TGGCCA 1 cut(s) 1012
MseI TTAA 6 cut(s) 418, 505, 954, 1192, 1372, 1445
MslI CAYNNNNRTG 1 cut(s) 553
Msp20I TGGCCA 1 cut(s) 1012
MspA1I CMGCKG 1 cut(s) 459
MspI CCGG 2 cut(s) 21, 58
MspR9I CCNGG 6 cut(s) 9, 21, 22, 43, 397, 493
MvaI CCWGG 4 cut(s) 9, 43, 397, 493
MvnI CGCG 1 cut(s) 604
MwoI GCNNNNNNNGC 4 cut(s) 43, 443, 465, 1196
NarI GGCGCC 1 cut(s) 672
NciI CCSGG 2 cut(s) 21, 22
NdeII GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
NlaIII CATG 5 cut(s) 414, 699, 938, 1119, 1315
NlaIV GGNNCC 2 cut(s) 649, 673
NmuCI GTSAC 2 cut(s) 3, 60
NspV TTCGAA 1 cut(s) 1102
OliI CACNNNNGTG 1 cut(s) 553
PaeR7I CTCGAG 1 cut(s) 676
PdmI GAANNNNTTC 1 cut(s) 1426
PfeI GAWTC 8 cut(s) 77, 108, 260, 313, 423, 585, 591, 718
PkrI GCNGC 3 cut(s) 94, 235, 238
PleI GAGTC 1 cut(s) 1261
PluTI GGCGCC 1 cut(s) 675
PpsI GAGTC 1 cut(s) 1261
PsiI TTATAA 1 cut(s) 331
Psp124BI GAGCTC 1 cut(s) 1201
Psp6I CCWGG 4 cut(s) 7, 41, 395, 491
PspEI GGTNACC 1 cut(s) 60
PspGI CCWGG 4 cut(s) 7, 41, 395, 491
PspN4I GGNNCC 2 cut(s) 649, 673
PspXI VCTCGAGB 1 cut(s) 676
PsuI RGATCY 1 cut(s) 1220
PvuII CAGCTG 1 cut(s) 459
RsaI GTAC 3 cut(s) 490, 1003, 1320
RsaNI GTAC 3 cut(s) 489, 1002, 1319
RseI CAYNNNNRTG 1 cut(s) 553
SacI GAGCTC 1 cut(s) 1201
SalI GTCGAC 2 cut(s) 699, 1182
SaqAI TTAA 6 cut(s) 418, 505, 954, 1192, 1372, 1445
SatI GCNGC 3 cut(s) 93, 234, 237
Sau3AI GATC 8 cut(s) 16, 617, 692, 883, 1118, 1220, 1280, 1390
SchI GAGTC 1 cut(s) 1262
ScrFI CCNGG 6 cut(s) 9, 21, 22, 43, 397, 493
SduI GDGCHC 5 cut(s) 27, 280, 966, 1201, 1245
SfaNI GCATC 2 cut(s) 400, 441
SfoI GGCGCC 1 cut(s) 673
Sfr274I CTCGAG 1 cut(s) 676
SfuI TTCGAA 1 cut(s) 1102
SlaI CTCGAG 1 cut(s) 676
SmaI CCCGGG 1 cut(s) 22
SmiMI CAYNNNNRTG 1 cut(s) 553
SmlI CTYRAG 4 cut(s) 580, 637, 676, 834
SmoI CTYRAG 4 cut(s) 580, 637, 676, 834
SpeI ACTAGT 1 cut(s) 563
Sse9I AATT 8 cut(s) 171, 502, 508, 632, 666, 1202, 1210, 1435
SsiI CCGC 8 cut(s) 31, 39, 92, 120, 144, 237, 1066, 1353
SspDI GGCGCC 1 cut(s) 671
SspI AATATT 1 cut(s) 1031
SspMI CTAG 3 cut(s) 349, 564, 1333
SstI GAGCTC 1 cut(s) 1201
StyD4I CCNGG 6 cut(s) 7, 19, 20, 41, 395, 491
StyI CCWWGG 1 cut(s) 893
TaaI ACNGT 5 cut(s) 199, 647, 1082, 1181, 1362
TaiI ACGT 3 cut(s) 143, 169, 1306
TaqI TCGA 9 cut(s) 80, 316, 677, 700, 755, 886, 1102, 1183, 1385
TaqII GACCGA 1 cut(s) 1403
TasI AATT 8 cut(s) 171, 502, 508, 632, 666, 1202, 1210, 1435
TatI WGTACW 1 cut(s) 1318
TauI GCSGC 2 cut(s) 95, 239
TfiI GAWTC 8 cut(s) 77, 108, 260, 313, 423, 585, 591, 718
Tru1I TTAA 6 cut(s) 418, 505, 954, 1192, 1372, 1445
Tru9I TTAA 6 cut(s) 418, 505, 954, 1192, 1372, 1445
TscAI CASTG 1 cut(s) 1013
TseFI GTSAC 2 cut(s) 3, 60
TseI GCWGC 1 cut(s) 233
Tsp45I GTSAC 2 cut(s) 3, 60
TspDTI ATGAA 9 cut(s) 436, 615, 679, 805, 951, 1060, 1147, 1156, 1285
TspGWI ACGGA 1 cut(s) 752
TspMI CCCGGG 1 cut(s) 20
TspRI CASTG 1 cut(s) 1013
XapI RAATTY 1 cut(s) 508
XhoI CTCGAG 1 cut(s) 676
XmaI CCCGGG 1 cut(s) 20
XmiI GTMKAC 2 cut(s) 700, 1183
XmnI GAANNNNTTC 1 cut(s) 1426
XspI CTAG 3 cut(s) 349, 564, 1333
ZraI GACGTC 1 cut(s) 1304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.