pycom15g04500

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
2688884 .. 2692812
3929 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g04500.2

Sequence Viewer

Length: 3888 bp
ATGACCATTGAGACACGGTCCACGAAGCAGAAAACAACCATGGGAAAGTCAACGACTGACTTGCCAGTGCAAGGCCTTGGACAGGATTTGCACTCTACAAAAAATCCGATCACATTTGCGCCGCCCGAGGCCACAAGTGTAATACGCCGAGAGAATGAAATCTGTCTCGGCGGGCAACCTCACAACCCAGCAGTCCCGAATCAAACGGCTGGAATGTTCATGGAAGGGATTGTGGAAGATTGTGACGACGATGGTGGAGAAGGTTCCGATCCACCAACTAGGACATTCCTTCGGCGACGACTGGAGGAACAATATCGTCAGGTCGAGCAGTCGATCGGTCAGAAGATGAATGATTTGCTAGAAGCAATACGTAGTAACAGCGATACACAGACCAGAATGCTCGAACTATTGGTTAGTAAAGCTTTCGAAGATGGCCAGGTCGGCCCACCTCGGCAGCTTTCGACGAATGTGCCAATACAAGCCGAGAGAGGGCCCGTCCGACCGCAACCAATCACCTTAGAAAGAAGAGGTGGACCAGGAAATAGATCCGAGGGACCAAGCCAGGGAGAAGAAGCCGCTTCCGTAAACATGACCGAAGTCCAGAGAATGATTGATTCAGCCCTGAAGAAAGGGCCGAAGTTTCCAAAATTCATTCATCCATACCCGGCTTATGTAGAAAGGTTTGAATACCCACGAGGATTTAAGATCCCTGATTTCAGCCTCTTTGCCGGGGAGTCGTCTTTATCCTCATTAGAACATGTGGCTCGGTTCACAGCGCAGTGTGGAGACGTCAATAGCGACTTCTACAAACTACGTTTGTTTAATTTTTCACTGACAGGTTCAGCTTTCGCCTGGTACATTAATCTTCCACCCAATTCTGTGCAGAGTTGGGAAGAGTTGGTCGAAAAATTCCATGAACAATTCTATCGGCCAGGGATGGAGATATCCGTATCATCCTTGGCCAGGATGGCTCAAGCATCCGACGAGTCTCCAATGGAGTACTTAACAAGGTTTAAGTCGGCCAGGAATTGGTGCCGAGTACCACTCCCCGAAGTGGAGTTCGTCAGGATCGCCCTTAACCGATTAGACGTGGAGTACAAAAAGAAGTTTCTGGGGGCAAATATTCGGGATATGTACGAACTTGCTCAACATGTCGAACAATATGATTATCTGCTCCGAGAAGAAAAGATATCGAAGTCACCATCCCGGGGGACGTTGTATAAGAACCCCACGGTGAGCTATGCATCGGCCGAAAGTGAAGACCCTCAGTATGTTAGTGTGGACGCGGCCGAGATAATAATAGACAAACCTTATGTTTGTAAGGCTTTGGCGCAAGTAAATACCAAAGACGCCAAAACCCGTTTGACCGCCGAGGAAACGGGCAAGTCATCAAAAGTATACACTTTTGATATCACCAAAGCTGATGCAATTTTCGATCAGTTATTGGCAGCAAAGATCATCAAGCTTCGGCCAGGACATACTATCCCTAAGGCCGATGAATTAAAAGGAAAGATATACTGCAAGTATCATAATTCTAATAAGCATGCAACCAATAATTGTGTTGTGTTCCGGGACACAATTCAAAGCTGGATCGAAAAAGGAAAGTTGAAATTTCCGGAAAAGATGGCGGTCGACGTCAACCCCTTCCCTTCAACAACAATTGGTATGGTGGATGCGCATATTCCTAAAAACAAAGAGAAGGCCGAATACGTCCCGGTGCAGCATATCCATAAACGGAATGGTCGAACAAGACTGAAGCTTGATTTGTTTTCAAATGCACCACCTACGGAACAATCAGAACCACCCGTCGACGAGCCGATGACGAGATCAAGTCCCGACGGAACTCATGAATCAAAAGTTTTATGTCATCATTGTAAAACACCAGTTGAGACTGGGAAGAAGACATCTTCAACACCACCCACGGCCCTTACAACATCATCAAAGGGGTTAGGTCCACGACATCAAGTGTTTGATCGACTCGGCCCATCAGTACGGCCGAAAGACCAGACCTCGGTCAGGCGGCGTCTGGAGTTCGACGCACCTTTCTACAATGAGGATTATTACTCGCGCAATGCTAGCAGTTCGGCCTCATCAGCCGATCGCAAAACTTTCAAACCACCAAGGACATCAGATCAACGCTGGTACAGTTATAATTCTCCGACTGGTTTATATACGGCGCTGTCCAAATCCCAAAAACGTCGCCGTCAACGGATAGATTGTATGGCTCGGCGACGCGAAGCGCAGGCCAGCCCGACCAACCAGTGGCAACCAAAAAAGGCCTTGGAAGACATTGGCGAACGGCCAACCCCGACTATCATGACCGAGTTAGCCGAAGGGAAGAAAGTAGCAGCTGCCGATTTCGAAACCACCATTGAGGAGTCTGAGAAACGTATTAAGATCGATCACTTCTTCGAGGCCGAAAGGAAACTTTCCCCGTTACCACCGCGCGAGCCGTTTATCAAAATACGGCGCAACTTACACCCTCCATTCCTTGGTGAATCCCTGGAATACATGCGCGAGTTTCATAAGAAGTACTCCGCCAATGACTTGTACGGACTCACCAAGGCATGTCAGGAAGCCCTCGACTTAGCTCTAACTTGTCCTGATGCCGAGCAAATAATCCAGAAAACCTCTGATCCAGCCATTAAAGCTAGGTTTCAACATATACGGGAGGCTCGGGTCCTTGGTTTTGAGGTCGATCCTTATACAGATATCGACACCACCGAATTGCCCTTTTCGCTCGAAGACCTTCAGCATTTACGTTATCACTTCGAAGTCTTCTCGGCTGTATCGCTCTTCGGCCTCACGGCCGACGAGGAAAAACGGATAGCACGGTTGGACACATATCTAGATACAAGGAACGCCCGTATTGCTTATGAAGAACGAGCCCGTGTAGCCAAGAACCAACGTGAATCTTCGGCAGTCAACATCGTCAAAGGAAATAGCCCACCTGCACTCGATTTTGTTCCCACGTCTCAGATACCGGTCCTAACCAAGGAACTCAAAAGTTTACTCGAGGATGTTCCGCCAACTATTACTGAGGATAGTTCTGCAGAAGACGATGACCACGATCAAATGGGTCCCTCGGTCCTCGAACATATGGAAATCAGTATGGTCAACGTCCTACCAGCTGAATTCCAACCAGGTACCCACCAGTCGAATTTCTTGGACGGGGACGTAGTTGCCGAGGAAGCAACGCAAGTAGACTTCGTCGCAAACGACGACGATAGAGAAAACCGAAGCAGGGACAACCTTAAGGCAGCGTTGGCCGAGCTATTTCCCCGTTCCCCCTCAACGAATCTCCAACACTTGAAGCCGTTGTATGTTACGGCTCACATCGAAGGATTTCCCGTCTCTAAAGTGTTTGTCGACTGTGGAGCCACAGTCAATATTATGCCGATATCCGTCATGAAAGCTTTACGCCGTACTGATAATGAACTCATTCCGTCAGGGATCGATATGAGCAGCTTCGTTGGTGATAAGTCTCAGACCAAAGGGGTGCTCCTGTTGGAAGTTAGCATTGCCGGCCGTCAACACATGACGGCATTCTTCATCATTGATTCCAAGACCGATTATAATGCATTACTTGGCCGCGACTGGATCCACCAAACCAGTTGCATTCCTTCATCACTCTATCAGGTCCTCATCTTTTGGGATGGCAAATCGGTCGTGGTTCACCCAGCCGATAACCAACCATTTGAGACCAACATGATTCAGGCCCGCTATTATGATGATCACGTCGGCTACATTACCCTCCAAGGCCTTAACGAGGATGGGCGGCCGACGAGAATTTCGGTACAAAAAGTAATTGAGGTCGGCGCCGAGACTGTTCAACAGGATTCGGCGAGACTTGGCTTGGCTAACTTAATCCTCAATACCGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1296

Amino Acids

146.04

Weight (kDa)

6.11

Isoelectric Point (pI)

49.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2151, 3576
AarI CACCTGC 1 cut(s) 2959
AatII GACGTC 2 cut(s) 792, 1638
Acc16I TGCGCA 1 cut(s) 1677
Acc36I ACCTGC 1 cut(s) 2959
Acc65I GGTACC 1 cut(s) 3146
AccB1I GGYRCC 3 cut(s) 1032, 3146, 3818
AccB7I CCANNNNNTGG 3 cut(s) 1029, 2262, 2492
AccI GTMKAC 5 cut(s) 1398, 1632, 1809, 3204, 3369
AccII CGCG 7 cut(s) 1286, 2068, 2235, 2446, 2448, 2517, 3594
AccIII TCCGGA 1 cut(s) 1615
AcsI RAATTY 6 cut(s) 647, 908, 1610, 3134, 3160, 3789
AcuI CTGAAG 3 cut(s) 644, 1775, 2735
AcyI GRCGYC 5 cut(s) 789, 1350, 1635, 2023, 3819
AflII CTTAAG 1 cut(s) 3254
AflIII ACRYGT 2 cut(s) 757, 1150
AgeI ACCGGT 1 cut(s) 2983
AjiI CACGTC 3 cut(s) 1090, 2973, 3739
Alw21I GWGCWC 1 cut(s) 3504
Ama87I CYCGRG 4 cut(s) 125, 1206, 2676, 3014
Aor13HI TCCGGA 1 cut(s) 1615
ApaI GGGCCC 1 cut(s) 495
ApeKI GCWGC 7 cut(s) 454, 1448, 1720, 2348, 2351, 3260, 3465
ApoI RAATTY 6 cut(s) 647, 908, 1610, 3134, 3160, 3789
ArsI GACNNNNNNTTYG 2 cut(s) 3775, 3807
AseI ATTAAT 1 cut(s) 861
AsiGI ACCGGT 1 cut(s) 2983
Asp700I GAANNNNTTC 3 cut(s) 2748, 3345, 3441
Asp718I GGTACC 1 cut(s) 3146
AsuC2I CCSGG 6 cut(s) 665, 730, 1207, 1208, 1571, 1715
AsuHPI GGTGA 8 cut(s) 505, 1191, 1246, 1405, 2507, 2551, 3488, 3668
AsuII TTCGAA 3 cut(s) 426, 2361, 2772
AsuNHI GCTAGC 1 cut(s) 2075
AvaI CYCGRG 4 cut(s) 125, 1206, 2676, 3014
AvaII GGWCC 9 cut(s) 18, 533, 554, 1952, 2680, 2986, 3080, 3088, 3640
AxyI CCTNAGG 1 cut(s) 1488
BaeGI GKGCMC 1 cut(s) 495
BalI TGGCCA 2 cut(s) 435, 962
BamHI GGATCC 1 cut(s) 3600
BanI GGYRCC 3 cut(s) 1032, 3146, 3818
BanII GRGCYC 2 cut(s) 495, 2890
BarI GAAGNNNNNNTAC 2 cut(s) 1691, 1723
BauI CACGAG 1 cut(s) 693
BbsI GAAGAC 6 cut(s) 1266, 1907, 2292, 2751, 2770, 3063
Bbv12I GWGCWC 1 cut(s) 3504
BbvI GCAGC 7 cut(s) 466, 1460, 1732, 2338, 2360, 3272, 3477
BccI CCATC 9 cut(s) 245, 425, 931, 961, 1210, 1618, 1993, 3650, 3767
BcgI CGANNNNNNTGC 8 cut(s) 43, 77, 451, 485, 3560, 3594, 3649, 3683
BclI TGATCA 1 cut(s) 3733
BcnI CCSGG 6 cut(s) 665, 730, 1207, 1208, 1571, 1715
BfaI CTAG 5 cut(s) 279, 359, 2076, 2652, 2849
BfmI CTRYAG 1 cut(s) 3051
BfoI RGCGCY 2 cut(s) 2180, 3822
BfrI CTTAAG 1 cut(s) 3254
BfuAI ACCTGC 1 cut(s) 2959
BglI GCCNNNNNGGC 2 cut(s) 441, 968
BmcAI AGTACT 2 cut(s) 1001, 2534
Bme18I GGWCC 9 cut(s) 18, 533, 554, 1952, 2680, 2986, 3080, 3088, 3640
BmeT110I CYCGRG 4 cut(s) 125, 1206, 2676, 3014
BmgBI CACGTC 3 cut(s) 1090, 2973, 3739
BmrI ACTGGG 1 cut(s) 1902
BmsI GCATC 5 cut(s) 986, 1253, 1414, 1663, 2596
BmtI GCTAGC 1 cut(s) 2079
BmuI ACTGGG 1 cut(s) 1902
BoxI GACNNNNGTC 2 cut(s) 596, 2012
BpiI GAAGAC 6 cut(s) 1266, 1907, 2292, 2751, 2770, 3063
BplI GAGNNNNNCTC 2 cut(s) 1029, 1061
BpmI CTGGAG 2 cut(s) 323, 2048
Bpu14I TTCGAA 3 cut(s) 426, 2361, 2772
BpuEI CTTGAG 1 cut(s) 957
BpuMI CCSGG 6 cut(s) 665, 730, 1207, 1208, 1571, 1715
Bsa29I ATCGAT 2 cut(s) 2400, 3456
BsaAI YACGTR 1 cut(s) 371
BsaHI GRCGYC 5 cut(s) 789, 1350, 1635, 2023, 3819
BsaI GGTCTC 1 cut(s) 3695
BsaWI WCCGGW 2 cut(s) 1615, 2983
BsaXI ACNNNNNCTCC 2 cut(s) 3369, 3399
Bse118I RCCGGY 2 cut(s) 2983, 3524
Bse1I ACTGG 9 cut(s) 65, 306, 1883, 1897, 2167, 2260, 3154, 3602, 3612
Bse21I CCTNAGG 1 cut(s) 1488
Bse3DI GCAATG 2 cut(s) 2077, 3519
BseAI TCCGGA 1 cut(s) 1615
BseCI ATCGAT 2 cut(s) 2400, 3456
BseMI GCAATG 2 cut(s) 2077, 3519
BseMII CTCAG 5 cut(s) 1280, 2373, 2990, 3030, 3500
BseNI ACTGG 9 cut(s) 65, 306, 1883, 1897, 2167, 2260, 3154, 3602, 3612
BseRI GAGGAG 1 cut(s) 2390
BseSI GKGCMC 1 cut(s) 495
BseX3I CGGCCG 6 cut(s) 1248, 1287, 1994, 2808, 3526, 3779
BseXI GCAGC 7 cut(s) 466, 1460, 1732, 2338, 2360, 3272, 3477
BseYI CCCAGC 2 cut(s) 187, 3679
BsgI GTGCAG 3 cut(s) 902, 1739, 2937
Bsh1236I CGCG 7 cut(s) 1286, 2068, 2235, 2446, 2448, 2517, 3594
BshNI GGYRCC 3 cut(s) 1032, 3146, 3818
BshTI ACCGGT 1 cut(s) 2983
BshVI ATCGAT 2 cut(s) 2400, 3456
BsiHKAI GWGCWC 1 cut(s) 3504
BsiHKCI CYCGRG 4 cut(s) 125, 1206, 2676, 3014
BsiSI CCGG 8 cut(s) 665, 729, 1207, 1570, 1616, 1715, 2984, 3525
BslFI GGGAC 9 cut(s) 179, 567, 1225, 1586, 1697, 1818, 3066, 3188, 3260
BsmBI CGTCTC 3 cut(s) 780, 2979, 3358
BsmFI GGGAC 9 cut(s) 179, 567, 1225, 1586, 1697, 1818, 3066, 3188, 3260
BsmI GAATGC 3 cut(s) 402, 3545, 3618
Bso31I GGTCTC 1 cut(s) 3695
BsoBI CYCGRG 4 cut(s) 125, 1206, 2676, 3014
Bsp119I TTCGAA 3 cut(s) 426, 2361, 2772
Bsp120I GGGCCC 1 cut(s) 491
Bsp1286I GDGCHC 3 cut(s) 495, 2890, 3504
Bsp13I TCCGGA 1 cut(s) 1615
Bsp19I CCATGG 1 cut(s) 39
BspCNI CTCAG 5 cut(s) 1279, 2374, 2989, 3031, 3499
BspDI ATCGAT 2 cut(s) 2400, 3456
BspEI TCCGGA 1 cut(s) 1615
BspFNI CGCG 7 cut(s) 1286, 2068, 2235, 2446, 2448, 2517, 3594
BspHI TCATGA 3 cut(s) 1846, 2316, 3408
BspMAI CTGCAG 1 cut(s) 3055
BspMI ACCTGC 1 cut(s) 2959
BspOI GCTAGC 1 cut(s) 2079
BspQI GCTCTTC 1 cut(s) 2801
BspT104I TTCGAA 3 cut(s) 426, 2361, 2772
BspT107I GGYRCC 3 cut(s) 1032, 3146, 3818
BspTI CTTAAG 1 cut(s) 3254
BspTNI GGTCTC 1 cut(s) 3695
BsrDI GCAATG 2 cut(s) 2077, 3519
BsrFI RCCGGY 2 cut(s) 2983, 3524
BsrI ACTGG 9 cut(s) 65, 306, 1883, 1897, 2167, 2260, 3154, 3602, 3612
BssAI RCCGGY 2 cut(s) 2983, 3524
BssNAI GTATAC 1 cut(s) 1399
BssNI GRCGYC 5 cut(s) 789, 1350, 1635, 2023, 3819
BssSI CACGAG 1 cut(s) 693
Bst1107I GTATAC 1 cut(s) 1399
Bst2BI CACGAG 1 cut(s) 693
Bst4CI ACNGT 7 cut(s) 18, 1234, 2147, 2835, 3374, 3385, 3829
Bst6I CTCTTC 3 cut(s) 520, 888, 2801
BstACI GRCGYC 5 cut(s) 789, 1350, 1635, 2023, 3819
BstAFI CTTAAG 1 cut(s) 3254
BstBAI YACGTR 1 cut(s) 371
BstBI TTCGAA 3 cut(s) 426, 2361, 2772
BstC8I GCNNGC 8 cut(s) 173, 1545, 2077, 2244, 2248, 2450, 3526, 3721
BstDEI CTNAG 8 cut(s) 517, 1266, 1488, 2382, 2587, 2976, 3039, 3486
BstDSI CCRYGG 3 cut(s) 39, 1230, 1920
BstENI CCTNNNNNAGG 5 cut(s) 80, 961, 2014, 2993, 3767
BstFNI CGCG 7 cut(s) 1286, 2068, 2235, 2446, 2448, 2517, 3594
BstH2I RGCGCY 2 cut(s) 2180, 3822
BstNSI RCATGY 5 cut(s) 761, 1154, 1547, 2515, 2571
BstPAI GACNNNNGTC 2 cut(s) 596, 2012
BstSFI CTRYAG 1 cut(s) 3051
BstSLI GKGCMC 1 cut(s) 495
BstSNI TACGTA 1 cut(s) 371
BstUI CGCG 7 cut(s) 1286, 2068, 2235, 2446, 2448, 2517, 3594
BstV1I GCAGC 7 cut(s) 466, 1460, 1732, 2338, 2360, 3272, 3477
BstV2I GAAGAC 6 cut(s) 1266, 1907, 2292, 2751, 2770, 3063
BstX2I RGATCY 3 cut(s) 545, 705, 3600
BstYI RGATCY 3 cut(s) 545, 705, 3600
BstZ17I GTATAC 1 cut(s) 1399
BstZI CGGCCG 6 cut(s) 1248, 1287, 1994, 2808, 3526, 3779
Bsu15I ATCGAT 2 cut(s) 2400, 3456
Bsu36I CCTNAGG 1 cut(s) 1488
BsuTUI ATCGAT 2 cut(s) 2400, 3456
BtgI CCRYGG 3 cut(s) 39, 1230, 1920
BtrI CACGTC 3 cut(s) 1090, 2973, 3739
BtsI GCAGTG 1 cut(s) 785
BtsIMutI CAGTG 4 cut(s) 72, 785, 830, 2267
BveI ACCTGC 1 cut(s) 2959
Cac8I GCNNGC 8 cut(s) 173, 1545, 2077, 2244, 2248, 2450, 3526, 3721
CciI TCATGA 3 cut(s) 1846, 2316, 3408
Cfr10I RCCGGY 2 cut(s) 2983, 3524
Cfr9I CCCGGG 1 cut(s) 1206
ClaI ATCGAT 2 cut(s) 2400, 3456
CseI GACGC 5 cut(s) 1292, 1358, 2012, 2045, 2241
CsiI ACCWGGT 1 cut(s) 3142
CspAI ACCGGT 1 cut(s) 2983
DdeI CTNAG 8 cut(s) 517, 1266, 1488, 2382, 2587, 2976, 3039, 3486
DinI GGCGCC 1 cut(s) 3820
EagI CGGCCG 6 cut(s) 1248, 1287, 1994, 2808, 3526, 3779
Eam1104I CTCTTC 3 cut(s) 520, 888, 2801
EarI CTCTTC 3 cut(s) 520, 888, 2801
EciI GGCGGA 2 cut(s) 2527, 3015
EclXI CGGCCG 6 cut(s) 1248, 1287, 1994, 2808, 3526, 3779
Eco105I TACGTA 1 cut(s) 371
Eco147I AGGCCT 3 cut(s) 75, 2279, 3762
Eco24I GRGCYC 2 cut(s) 495, 2890
Eco31I GGTCTC 1 cut(s) 3695
Eco32I GATATC 5 cut(s) 945, 1191, 1411, 2713, 3402
Eco47I GGWCC 9 cut(s) 18, 533, 554, 1952, 2680, 2986, 3080, 3088, 3640
Eco52I CGGCCG 6 cut(s) 1248, 1287, 1994, 2808, 3526, 3779
Eco57I CTGAAG 3 cut(s) 644, 1775, 2735
Eco81I CCTNAGG 1 cut(s) 1488
Eco88I CYCGRG 4 cut(s) 125, 1206, 2676, 3014
EcoNI CCTNNNNNAGG 5 cut(s) 80, 961, 2014, 2993, 3767
EcoO109I RGGNCCY 4 cut(s) 491, 2680, 3080, 3640
EcoRI GAATTC 1 cut(s) 3134
EcoRV GATATC 5 cut(s) 945, 1191, 1411, 2713, 3402
EcoT22I ATGCAT 2 cut(s) 1246, 3583
EcoT38I GRGCYC 2 cut(s) 495, 2890
EgeI GGCGCC 1 cut(s) 3820
EheI GGCGCC 1 cut(s) 3820
Esp3I CGTCTC 3 cut(s) 780, 2979, 3358
FaqI GGGAC 9 cut(s) 179, 567, 1225, 1586, 1697, 1818, 3066, 3188, 3260
FauI CCCGC 2 cut(s) 164, 3728
FauNDI CATATG 1 cut(s) 3099
FbaI TGATCA 1 cut(s) 3733
FblI GTMKAC 5 cut(s) 1398, 1632, 1809, 3204, 3369
FriOI GRGCYC 2 cut(s) 495, 2890
FspAI RTGCGCAY 1 cut(s) 1677
FspBI CTAG 5 cut(s) 279, 359, 2076, 2652, 2849
FspI TGCGCA 1 cut(s) 1677
GsaI CCCAGC 2 cut(s) 191, 3683
GsuI CTGGAG 2 cut(s) 323, 2048
HaeII RGCGCY 2 cut(s) 2180, 3822
HapII CCGG 8 cut(s) 665, 729, 1207, 1570, 1616, 1715, 2984, 3525
HgaI GACGC 5 cut(s) 1292, 1358, 2012, 2045, 2241
Hin1I GRCGYC 5 cut(s) 789, 1350, 1635, 2023, 3819
HincII GTYRAC 9 cut(s) 51, 1633, 1639, 1810, 2207, 2926, 3118, 3370, 3533
HindII GTYRAC 9 cut(s) 51, 1633, 1639, 1810, 2207, 2926, 3118, 3370, 3533
HindIII AAGCTT 4 cut(s) 420, 1463, 1757, 3414
HpaII CCGG 8 cut(s) 665, 729, 1207, 1570, 1616, 1715, 2984, 3525
HphI GGTGA 8 cut(s) 505, 1191, 1246, 1405, 2507, 2551, 3488, 3668
HpyCH4III ACNGT 7 cut(s) 18, 1234, 2147, 2835, 3374, 3385, 3829
HpyF3I CTNAG 8 cut(s) 517, 1266, 1488, 2382, 2587, 2976, 3039, 3486
Hsp92I GRCGYC 5 cut(s) 789, 1350, 1635, 2023, 3819
KasI GGCGCC 1 cut(s) 3818
KflI GGGWCCC 1 cut(s) 3080
Kpn2I TCCGGA 1 cut(s) 1615
KpnI GGTACC 1 cut(s) 3150
KroI GCCGGC 1 cut(s) 3524
KroNI GCCGGC 1 cut(s) 3526
Ksp22I TGATCA 1 cut(s) 3733
LguI GCTCTTC 1 cut(s) 2801
LmnI GCTCC 3 cut(s) 1179, 3377, 3507
Lsp1109I GCAGC 7 cut(s) 466, 1460, 1732, 2338, 2360, 3272, 3477
LweI GCATC 5 cut(s) 986, 1253, 1414, 1663, 2596
MabI ACCWGGT 1 cut(s) 3142
MaeI CTAG 5 cut(s) 279, 359, 2076, 2652, 2849
MaeIII GTNAC 5 cut(s) 242, 374, 1197, 2436, 3325
MfeI CAATTG 1 cut(s) 1659
MflI RGATCY 3 cut(s) 545, 705, 3600
MhlI GDGCHC 3 cut(s) 495, 2890, 3504
MlsI TGGCCA 2 cut(s) 435, 962
MluNI TGGCCA 2 cut(s) 435, 962
Mly113I GGCGCC 1 cut(s) 3819
MlyI GAGTC 5 cut(s) 743, 995, 1971, 2387, 2550
MmeI TCCRAC 7 cut(s) 523, 1005, 2183, 2817, 3163, 3328, 3489
Mox20I TGGCCA 2 cut(s) 435, 962
Mph1103I ATGCAT 2 cut(s) 1246, 3583
MroI TCCGGA 1 cut(s) 1615
MroNI GCCGGC 1 cut(s) 3524
MroXI GAANNNNTTC 3 cut(s) 2748, 3345, 3441
MscI TGGCCA 2 cut(s) 435, 962
Msp20I TGGCCA 2 cut(s) 435, 962
MspA1I CMGCKG 2 cut(s) 2351, 3131
MspCI CTTAAG 1 cut(s) 3254
MspI CCGG 8 cut(s) 665, 729, 1207, 1570, 1616, 1715, 2984, 3525
MunI CAATTG 1 cut(s) 1659
Mva1269I GAATGC 3 cut(s) 402, 3545, 3618
MvnI CGCG 7 cut(s) 1286, 2068, 2235, 2446, 2448, 2517, 3594
NaeI GCCGGC 1 cut(s) 3526
NarI GGCGCC 1 cut(s) 3819
NciI CCSGG 6 cut(s) 665, 730, 1207, 1208, 1571, 1715
NcoI CCATGG 1 cut(s) 39
NdeI CATATG 1 cut(s) 3099
NgoMIV GCCGGC 1 cut(s) 3524
NheI GCTAGC 1 cut(s) 2075
NmuCI GTSAC 2 cut(s) 242, 1197
NsbI TGCGCA 1 cut(s) 1677
NsiI ATGCAT 2 cut(s) 1246, 3583
NspI RCATGY 5 cut(s) 761, 1154, 1547, 2515, 2571
NspV TTCGAA 3 cut(s) 426, 2361, 2772
PaeI GCATGC 1 cut(s) 1547
PaeR7I CTCGAG 1 cut(s) 3014
PagI TCATGA 3 cut(s) 1846, 2316, 3408
PaqCI CACCTGC 1 cut(s) 2959
PceI AGGCCT 3 cut(s) 75, 2279, 3762
PciI ACATGT 2 cut(s) 757, 1150
PciSI GCTCTTC 1 cut(s) 2801
PcsI WCGNNNNNNNCGW 7 cut(s) 795, 1741, 2721, 3066, 3183, 3216, 3219
PctI GAATGC 3 cut(s) 402, 3545, 3618
PdiI GCCGGC 1 cut(s) 3526
PdmI GAANNNNTTC 3 cut(s) 2748, 3345, 3441
PfeI GAWTC 9 cut(s) 199, 614, 1850, 2498, 2912, 3298, 3560, 3712, 3839
PflFI GACNNNGTC 2 cut(s) 16, 3209
PflMI CCANNNNNTGG 3 cut(s) 1029, 2262, 2492
PfoI TCCNGGA 1 cut(s) 1569
PinAI ACCGGT 1 cut(s) 2983
Ple19I CGATCG 2 cut(s) 336, 2101
PleI GAGTC 5 cut(s) 742, 994, 1971, 2386, 2550
PluTI GGCGCC 1 cut(s) 3822
PpsI GAGTC 5 cut(s) 742, 994, 1971, 2386, 2550
Ppu21I YACGTR 1 cut(s) 371
PpuMI RGGWCCY 3 cut(s) 2680, 3080, 3640
PscI ACATGT 2 cut(s) 757, 1150
PshAI GACNNNNGTC 2 cut(s) 596, 2012
PshBI ATTAAT 1 cut(s) 861
PsiI TTATAA 2 cut(s) 2151, 3576
Psp5II RGGWCCY 3 cut(s) 2680, 3080, 3640
PspFI CCCAGC 2 cut(s) 187, 3679
PspOMI GGGCCC 1 cut(s) 491
PspPPI RGGWCCY 3 cut(s) 2680, 3080, 3640
PspXI VCTCGAGB 1 cut(s) 3014
PstI CTGCAG 1 cut(s) 3055
PsuI RGATCY 3 cut(s) 545, 705, 3600
PsyI GACNNNGTC 2 cut(s) 16, 3209
PvuI CGATCG 2 cut(s) 336, 2101
PvuII CAGCTG 2 cut(s) 2351, 3131
SalI GTCGAC 3 cut(s) 1631, 1808, 3368
SapI GCTCTTC 1 cut(s) 2801
ScaI AGTACT 2 cut(s) 1001, 2534
SchI GAGTC 5 cut(s) 743, 995, 1971, 2387, 2550
SduI GDGCHC 3 cut(s) 495, 2890, 3504
SexAI ACCWGGT 1 cut(s) 3142
SfaNI GCATC 5 cut(s) 986, 1253, 1414, 1663, 2596
SfcI CTRYAG 1 cut(s) 3051
SfiI GGCCNNNNNGGCC 1 cut(s) 441
SfoI GGCGCC 1 cut(s) 3820
Sfr274I CTCGAG 1 cut(s) 3014
SfuI TTCGAA 3 cut(s) 426, 2361, 2772
SgrDI CGTCGACG 1 cut(s) 1808
SinI GGWCC 9 cut(s) 18, 533, 554, 1952, 2680, 2986, 3080, 3088, 3640
SlaI CTCGAG 1 cut(s) 3014
SmaI CCCGGG 1 cut(s) 1208
SmlI CTYRAG 3 cut(s) 972, 3014, 3254
SmoI CTYRAG 3 cut(s) 972, 3014, 3254
SnaBI TACGTA 1 cut(s) 371
SphI GCATGC 1 cut(s) 1547
SseBI AGGCCT 3 cut(s) 75, 2279, 3762
SspDI GGCGCC 1 cut(s) 3818
SspI AATATT 2 cut(s) 1123, 3391
SspMI CTAG 5 cut(s) 279, 359, 2076, 2652, 2849
StuI AGGCCT 3 cut(s) 75, 2279, 3762
TaaI ACNGT 7 cut(s) 18, 1234, 2147, 2835, 3374, 3385, 3829
TaqII GACCGA 7 cut(s) 326, 608, 2002, 2336, 3076, 3584, 3655
TatI WGTACW 3 cut(s) 999, 1095, 2532
TauI GCSGC 6 cut(s) 124, 578, 1289, 2023, 3594, 3781
TfiI GAWTC 9 cut(s) 199, 614, 1850, 2498, 2912, 3298, 3560, 3712, 3839
TscAI CASTG 4 cut(s) 72, 785, 837, 2267
TseFI GTSAC 2 cut(s) 242, 1197
TseI GCWGC 7 cut(s) 454, 1448, 1720, 2348, 2351, 3260, 3465
Tsp45I GTSAC 2 cut(s) 242, 1197
TspMI CCCGGG 1 cut(s) 1206
TspRI CASTG 4 cut(s) 72, 785, 837, 2267
Tth111I GACNNNGTC 2 cut(s) 16, 3209
Van91I CCANNNNNTGG 3 cut(s) 1029, 2262, 2492
Vha464I CTTAAG 1 cut(s) 3254
VpaK11BI GGWCC 9 cut(s) 18, 533, 554, 1952, 2680, 2986, 3080, 3088, 3640
VspI ATTAAT 1 cut(s) 861
XagI CCTNNNNNAGG 5 cut(s) 80, 961, 2014, 2993, 3767
XapI RAATTY 6 cut(s) 647, 908, 1610, 3134, 3160, 3789
XbaI TCTAGA 1 cut(s) 2848
XceI RCATGY 5 cut(s) 761, 1154, 1547, 2515, 2571
XcmI CCANNNNNNNNNTGG 1 cut(s) 1736
XhoI CTCGAG 1 cut(s) 3014
XmaI CCCGGG 1 cut(s) 1206
XmiI GTMKAC 5 cut(s) 1398, 1632, 1809, 3204, 3369
XmnI GAANNNNTTC 3 cut(s) 2748, 3345, 3441
XspI CTAG 5 cut(s) 279, 359, 2076, 2652, 2849
ZraI GACGTC 2 cut(s) 790, 1636
ZrmI AGTACT 2 cut(s) 1001, 2534
Zsp2I ATGCAT 2 cut(s) 1246, 3583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.