RLG00000022630

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
5672005 .. 5672997
993 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022630

Sequence Viewer

Length: 708 bp
ATGGATCAGAAAGAGCACAGCCTTAATGACACACAAAAGATATTAAGAGAGCAAGGCTATGCAATTGACACGGTGAAACCTGGCCTTGGTTTTGACCCAAATGAACCAATCAAGATATCTGCTAAAAGGAGGGGTAAGAATATAAATGTCCAACACATTACTGCTGACTTGGAAGAAGAAAGTGTGGAGACTCAAGATCCCCCTCATGGTTCAACCTTCGACCATATTAGCCCAGCCATGGAGACTTCAGTGCTTGAGCCTACAAATGCTTCAAGACCACGAGCTTCAGTGTTCAACCAAATGGGCACGGCAAGGTTGCGGGCGTCAGTGTTTAATCAGATGGATACAACAGTTTCTTGGACTTCTGTGTTTAGAAGGCTTACTCGCCCAAATAAAATGATTGAGCCACTAAACTTTGTCCCACGGATAGAGATAAAGAGAAAAGAGTGTGAAGAACCAAGAGAAGATAAAGAGATTCGTAGCCTTATACCATCATGCATGAAGCGACATGTGACATTAGAGGTGGAGTCAAGTGGTGAATTGAAAGTCAAGCAACGTGTGATCATATTCACCAAACAACTTGAAGAACATTGCGATGAAAGGGAAAAAGTAGAAGACAGCTATGCGGTCAGTGTACATGTCACAATAGAAGAGGGAAAGTGCCAAGAGTCCTCTAATACCAAGTTCCTGAAGTGTTACTACGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

236

Amino Acids

26.99

Weight (kDa)

6.21

Isoelectric Point (pI)

63.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 319, 626
AclWI GGATC 2 cut(s) 12, 191
AcuI CTGAAG 2 cut(s) 231, 270
AcyI GRCGYC 1 cut(s) 323
AfaI GTAC 1 cut(s) 636
AfiI CCNNNNNNNGG 3 cut(s) 86, 206, 238
AflIII ACRYGT 3 cut(s) 508, 556, 637
AgsI TTSAA 5 cut(s) 213, 273, 295, 544, 584
AjnI CCWGG 1 cut(s) 79
AluBI AGCT 2 cut(s) 284, 621
AluI AGCT 2 cut(s) 284, 621
Alw21I GWGCWC 1 cut(s) 18
Alw26I GTCTC 2 cut(s) 182, 236
AlwI GGATC 2 cut(s) 12, 191
AoxI GGCC 1 cut(s) 82
AsuHPI GGTGA 3 cut(s) 85, 548, 562
BaeGI GKGCMC 1 cut(s) 308
BaeI ACNNNNGTAYC 2 cut(s) 336, 369
BarI GAAGNNNNNNTAC 1 cut(s) 683
BauI CACGAG 1 cut(s) 279
BbsI GAAGAC 1 cut(s) 621
Bbv12I GWGCWC 1 cut(s) 18
BccI CCATC 2 cut(s) 334, 499
BceAI ACGGC 1 cut(s) 324
BciT130I CCWGG 1 cut(s) 81
BciVI GTATCC 1 cut(s) 337
BclI TGATCA 1 cut(s) 561
BcoDI GTCTC 2 cut(s) 182, 236
BfuI GTATCC 1 cut(s) 337
Bme1390I CCNGG 1 cut(s) 81
BmrFI CCNGG 1 cut(s) 81
BpiI GAAGAC 1 cut(s) 621
BpuEI CTTGAG 2 cut(s) 177, 275
BsaHI GRCGYC 1 cut(s) 323
BsaJI CCNNGG 3 cut(s) 85, 237, 422
Bsc4I CCNNNNNNNGG 3 cut(s) 86, 206, 238
Bse3DI GCAATG 1 cut(s) 589
BseBI CCWGG 1 cut(s) 81
BseDI CCNNGG 3 cut(s) 85, 237, 422
BseLI CCNNNNNNNGG 3 cut(s) 86, 206, 238
BseMI GCAATG 1 cut(s) 589
BseSI GKGCMC 1 cut(s) 308
BseYI CCCAGC 1 cut(s) 232
BshFI GGCC 1 cut(s) 84
BsiHKAI GWGCWC 1 cut(s) 18
BslFI GGGAC 1 cut(s) 404
BslI CCNNNNNNNGG 3 cut(s) 86, 206, 238
BsmAI GTCTC 2 cut(s) 182, 236
BsmFI GGGAC 1 cut(s) 404
BsnI GGCC 1 cut(s) 84
Bsp1286I GDGCHC 2 cut(s) 18, 308
Bsp1407I TGTACA 1 cut(s) 634
Bsp143I GATC 3 cut(s) 4, 196, 561
Bsp19I CCATGG 1 cut(s) 237
BspACI CCGC 2 cut(s) 319, 626
BspANI GGCC 1 cut(s) 84
BspPI GGATC 2 cut(s) 12, 191
BsrDI GCAATG 1 cut(s) 589
BsrGI TGTACA 1 cut(s) 634
BssECI CCNNGG 3 cut(s) 85, 237, 422
BssMI GATC 3 cut(s) 4, 196, 561
BssNI GRCGYC 1 cut(s) 323
BssSI CACGAG 1 cut(s) 279
BssT1I CCWWGG 2 cut(s) 85, 237
Bst2BI CACGAG 1 cut(s) 279
Bst2UI CCWGG 1 cut(s) 81
Bst4CI ACNGT 2 cut(s) 73, 352
Bst6I CTCTTC 1 cut(s) 645
BstACI GRCGYC 1 cut(s) 323
BstAUI TGTACA 1 cut(s) 634
BstC8I GCNNGC 1 cut(s) 321
BstDSI CCRYGG 2 cut(s) 237, 422
BstKTI GATC 3 cut(s) 7, 199, 564
BstMAI GTCTC 2 cut(s) 182, 236
BstMBI GATC 3 cut(s) 4, 196, 561
BstNI CCWGG 1 cut(s) 81
BstNSI RCATGY 2 cut(s) 512, 641
BstSCI CCNGG 1 cut(s) 79
BstSLI GKGCMC 1 cut(s) 308
BstV2I GAAGAC 1 cut(s) 621
BstX2I RGATCY 1 cut(s) 196
BstYI RGATCY 1 cut(s) 196
BsuI GTATCC 1 cut(s) 337
BsuRI GGCC 1 cut(s) 84
BtgI CCRYGG 2 cut(s) 237, 422
BtgZI GCGATG 1 cut(s) 609
BtsIMutI CAGTG 4 cut(s) 255, 294, 333, 637
Cac8I GCNNGC 1 cut(s) 321
CseI GACGC 1 cut(s) 312
Csp6I GTAC 1 cut(s) 635
CviAII CATG 6 cut(s) 206, 238, 495, 499, 509, 638
CviQI GTAC 1 cut(s) 635
DpnI GATC 3 cut(s) 6, 198, 563
DpnII GATC 3 cut(s) 4, 196, 561
Eam1104I CTCTTC 1 cut(s) 645
EarI CTCTTC 1 cut(s) 645
Eco130I CCWWGG 2 cut(s) 85, 237
Eco32I GATATC 1 cut(s) 117
Eco57I CTGAAG 2 cut(s) 231, 270
EcoRII CCWGG 1 cut(s) 79
EcoRV GATATC 1 cut(s) 117
EcoT14I CCWWGG 2 cut(s) 85, 237
EcoT22I ATGCAT 1 cut(s) 500
ErhI CCWWGG 2 cut(s) 85, 237
FaeI CATG 6 cut(s) 209, 241, 498, 502, 512, 641
FaqI GGGAC 1 cut(s) 404
FatI CATG 6 cut(s) 205, 237, 494, 498, 508, 637
FauI CCCGC 1 cut(s) 312
FbaI TGATCA 1 cut(s) 561
GsaI CCCAGC 1 cut(s) 236
HaeIII GGCC 1 cut(s) 84
HgaI GACGC 1 cut(s) 312
Hin1I GRCGYC 1 cut(s) 323
Hin1II CATG 6 cut(s) 209, 241, 498, 502, 512, 641
HinfI GANTC 4 cut(s) 190, 475, 527, 668
HphI GGTGA 3 cut(s) 85, 548, 562
Hpy166II GTNNAC 1 cut(s) 635
Hpy188I TCNGA 2 cut(s) 9, 339
Hpy188III TCNNGA 4 cut(s) 112, 194, 273, 688
Hpy8I GTNNAC 1 cut(s) 635
HpyAV CCTTC 2 cut(s) 226, 369
HpyCH4III ACNGT 2 cut(s) 73, 352
HpyCH4IV ACGT 1 cut(s) 556
HpyCH4V TGCA 2 cut(s) 62, 498
HpySE526I ACGT 1 cut(s) 556
Hsp92I GRCGYC 1 cut(s) 323
Hsp92II CATG 6 cut(s) 209, 241, 498, 502, 512, 641
Ksp22I TGATCA 1 cut(s) 561
Kzo9I GATC 3 cut(s) 4, 196, 561
LpnPI CCDG 4 cut(s) 66, 93, 246, 701
MaeII ACGT 1 cut(s) 556
MaeIII GTNAC 3 cut(s) 511, 640, 695
MalI GATC 3 cut(s) 6, 198, 563
MboI GATC 3 cut(s) 4, 196, 561
MboII GAAGA 7 cut(s) 185, 188, 464, 476, 596, 626, 662
MfeI CAATTG 1 cut(s) 63
MflI RGATCY 1 cut(s) 196
MhlI GDGCHC 2 cut(s) 18, 308
MluCI AATT 2 cut(s) 63, 539
MlyI GAGTC 3 cut(s) 184, 536, 677
MmeI TCCRAC 1 cut(s) 175
MnlI CCTC 5 cut(s) 123, 213, 514, 646, 682
Mph1103I ATGCAT 1 cut(s) 500
MseI TTAA 3 cut(s) 24, 44, 333
MslI CAYNNNNRTG 1 cut(s) 594
MspR9I CCNGG 1 cut(s) 81
MunI CAATTG 1 cut(s) 63
MvaI CCWGG 1 cut(s) 81
NcoI CCATGG 1 cut(s) 237
NdeII GATC 3 cut(s) 4, 196, 561
NlaIII CATG 6 cut(s) 209, 241, 498, 502, 512, 641
NmuCI GTSAC 2 cut(s) 511, 640
NsiI ATGCAT 1 cut(s) 500
NspI RCATGY 2 cut(s) 512, 641
PciI ACATGT 2 cut(s) 508, 637
PfeI GAWTC 1 cut(s) 475
PleI GAGTC 3 cut(s) 184, 535, 676
PpsI GAGTC 3 cut(s) 184, 535, 676
PscI ACATGT 2 cut(s) 508, 637
Psp6I CCWGG 1 cut(s) 79
PspFI CCCAGC 1 cut(s) 232
PspGI CCWGG 1 cut(s) 79
PsuI RGATCY 1 cut(s) 196
RsaI GTAC 1 cut(s) 636
RsaNI GTAC 1 cut(s) 635
RseI CAYNNNNRTG 1 cut(s) 594
SaqAI TTAA 3 cut(s) 24, 44, 333
Sau3AI GATC 3 cut(s) 4, 196, 561
SchI GAGTC 3 cut(s) 184, 536, 677
ScrFI CCNGG 1 cut(s) 81
SduI GDGCHC 2 cut(s) 18, 308
SetI ASST 7 cut(s) 82, 218, 286, 317, 525, 559, 623
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 2 cut(s) 192, 254
SmoI CTYRAG 2 cut(s) 192, 254
Sse9I AATT 2 cut(s) 63, 539
SsiI CCGC 2 cut(s) 319, 626
StyD4I CCNGG 1 cut(s) 79
StyI CCWWGG 2 cut(s) 85, 237
TaaI ACNGT 2 cut(s) 73, 352
TaiI ACGT 1 cut(s) 559
TaqI TCGA 1 cut(s) 219
TasI AATT 2 cut(s) 63, 539
TatI WGTACW 1 cut(s) 634
TfiI GAWTC 1 cut(s) 475
Tru1I TTAA 3 cut(s) 24, 44, 333
Tru9I TTAA 3 cut(s) 24, 44, 333
TscAI CASTG 4 cut(s) 255, 294, 333, 637
TseFI GTSAC 2 cut(s) 511, 640
Tsp45I GTSAC 2 cut(s) 511, 640
TspDTI ATGAA 3 cut(s) 117, 515, 612
TspGWI ACGGA 1 cut(s) 439
TspRI CASTG 4 cut(s) 255, 294, 333, 637
XceI RCATGY 2 cut(s) 512, 641
Zsp2I ATGCAT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.