pycom17g12670

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000128
Physical Location & Seq
Forward (+)
10416965 .. 10418254
1290 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g12670.1

Sequence Viewer

Length: 1290 bp
ATGAAAGTCGACCCAAATGTTGGTCCATTAAAGAAAGAAGTCGACGAAGAAGAGGAGCCTCCAGTGGAGAAAGTCGAAGAGAAGCCGAAGCTAGACCAAGCAACGACATCCATGGGATCTCTCTCTATCCAGCAGCTACAGGAGATGATCGCAAGCACTATCAAGACACAGTACGAAGGAAGCTCGCATGACTCCGTATTGTACTCAAAGCCTTACTCCAAGAAGATTGATGCTTTGAAGATGCCAAGGGGTTATCAGCCCCCAAAATTCATGCAGTTCGATGGAAAAGGCAACTCGAAGCAACATGTCGCCCATTTCATTGAAACTTGCAACAATGCTGGGACAGAGGGAGACTACCTCGTCAAACAGTTCGTGCGTTCGCTGAAAAGTAACGCTTTTGACTGGTACACTGACCTCGAACCTGAGTCTATCAACAGTTGGGACCAGCTAGAAAGGGAATTCCTCAACCGTTTCTACAGCACTCGTCGTACTGTAAGCATGCTAGAGCTGACCAGTACGAAACAGTGGAGAGATGAACCTGTCATCGACTACATAAATAGATGGCGTTCATTAAGCCTGGATTGCAAAAATCGGCTTTCTGAAACCTCCGTCATTGAGATGTGTGTTCAAGGCATGGAGTGGGGACTACACTACATCCTTCAAGGCATCAAACCACGAACATTTGAGGAGTTAGCCACCTGCGCCCATGATATGGAGTTAAGCATCACCCGTCATGGGAAGAAAGAACAGATCACCGACTACAAGAATGACAAAGTTTTGGGGCCAAAGGTGGATAAGGCTACGTGGAAACCCACCAAGGAAGCAATGACGGTCAACACAACTCCAGTCAAAATCCATACACGAGGCAAGGCGATTCAAACCGAAGTTTTTCGTGATCAAGAGATACGTAGACGCACTTTGAAGGAGCTTGAGGAGAAAACTTATCCATTCCCCGACTCTGACGTGGTTGCCATGTTAGATGACTTACTGGAAAAAAAGGTGATCGACCTACCTGAGTGTAAACGGCCGGAAGATATGAACCGTACTGACAGTCCAAGGTACTGTAAATTCCACCGCTTCATTAGTCATCTGACGGAAAAGTGCTTTGTGCTAAAAGATCTCATCATGAAGTTGGCTCAGAAAGGGATCATCGAGCTAGATCTTAATGATGTGGTGAAGTCAAACTATACCACCGTCACTTCTGGCTCTTTGAACTCAAAATCTTCACCTCAACCGCTGGGGGCATGCTCCAAAACCATGTCAGTCAAGTCAAGTGAAGTTGAAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

430

Amino Acids

49.36

Weight (kDa)

6.55

Isoelectric Point (pI)

42.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 124 - 213 3.4e-13 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 707
AasI GACNNNNNNGTC 1 cut(s) 359
Acc36I ACCTGC 1 cut(s) 707
AccB7I CCANNNNNTGG 2 cut(s) 20, 712
AccI GTMKAC 3 cut(s) 9, 42, 910
AciI CCGC 2 cut(s) 1075, 1235
AclWI GGATC 2 cut(s) 124, 1154
AcoI YGGCCR 1 cut(s) 1025
AcsI RAATTY 3 cut(s) 266, 458, 1067
AfaI GTAC 7 cut(s) 173, 203, 407, 490, 517, 1045, 1061
AfiI CCNNNNNNNGG 3 cut(s) 20, 712, 735
AflIII ACRYGT 1 cut(s) 304
AgsI TTSAA 8 cut(s) 238, 323, 629, 662, 878, 922, 1213, 1283
AjiI CACGTC 1 cut(s) 964
AjnI CCWGG 1 cut(s) 576
AluBI AGCT 7 cut(s) 91, 136, 183, 448, 508, 928, 1156
AluI AGCT 7 cut(s) 91, 136, 183, 448, 508, 928, 1156
Alw26I GTCTC 1 cut(s) 345
AlwI GGATC 2 cut(s) 124, 1154
AoxI GGCC 2 cut(s) 782, 1025
ApeKI GCWGC 1 cut(s) 133
ApoI RAATTY 3 cut(s) 266, 458, 1067
Asp700I GAANNNNTTC 1 cut(s) 888
AspLEI GCGC 1 cut(s) 704
AspS9I GGNCC 3 cut(s) 23, 442, 782
AsuHPI GGTGA 5 cut(s) 718, 745, 1012, 1186, 1218
AvaII GGWCC 2 cut(s) 23, 442
BauI CACGAG 1 cut(s) 861
BbvI GCAGC 1 cut(s) 145
BccI CCATC 2 cut(s) 275, 555
BceAI ACGGC 1 cut(s) 1040
BciT130I CCWGG 1 cut(s) 578
BclI TGATCA 1 cut(s) 895
BcoDI GTCTC 1 cut(s) 345
BfaI CTAG 4 cut(s) 92, 449, 503, 1157
BfmI CTRYAG 2 cut(s) 137, 475
BfuAI ACCTGC 1 cut(s) 707
BglII AGATCT 2 cut(s) 1117, 1159
BisI GCNGC 1 cut(s) 134
BlsI GCNGC 1 cut(s) 135
Bme1390I CCNGG 1 cut(s) 578
Bme18I GGWCC 2 cut(s) 23, 442
BmgBI CACGTC 1 cut(s) 964
BmgT120I GGNCC 3 cut(s) 23, 442, 782
BmiI GGNNCC 3 cut(s) 57, 443, 783
BmrFI CCNGG 1 cut(s) 578
BmsI GCATC 4 cut(s) 220, 231, 675, 732
BplI GAGNNNNNCTC 2 cut(s) 342, 374
BpmI CTGGAG 2 cut(s) 45, 828
BpuEI CTTGAG 1 cut(s) 950
BsaAI YACGTR 2 cut(s) 804, 908
BsaJI CCNNGG 4 cut(s) 111, 245, 816, 1055
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 712, 735
Bse1I ACTGG 5 cut(s) 62, 407, 513, 845, 993
Bse3DI GCAATG 1 cut(s) 831
BseBI CCWGG 1 cut(s) 578
BseDI CCNNGG 4 cut(s) 111, 245, 816, 1055
BseGI GGATG 2 cut(s) 107, 654
BseLI CCNNNNNNNGG 3 cut(s) 20, 712, 735
BseMI GCAATG 1 cut(s) 831
BseMII CTCAG 3 cut(s) 414, 1005, 1151
BseNI ACTGG 5 cut(s) 62, 407, 513, 845, 993
BseRI GAGGAG 3 cut(s) 68, 701, 947
BseX3I CGGCCG 1 cut(s) 1025
BseXI GCAGC 1 cut(s) 145
BseYI CCCAGC 2 cut(s) 338, 1237
Bsh1285I CGRYCG 1 cut(s) 1028
BshFI GGCC 2 cut(s) 784, 1027
BsiEI CGRYCG 1 cut(s) 1028
BsiSI CCGG 1 cut(s) 1028
BslFI GGGAC 3 cut(s) 355, 455, 657
BslI CCNNNNNNNGG 3 cut(s) 20, 712, 735
BsmAI GTCTC 1 cut(s) 345
BsmFI GGGAC 3 cut(s) 355, 455, 657
BsnI GGCC 2 cut(s) 784, 1027
Bsp143I GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
Bsp19I CCATGG 1 cut(s) 111
BspACI CCGC 2 cut(s) 1075, 1235
BspANI GGCC 2 cut(s) 784, 1027
BspCNI CTCAG 3 cut(s) 415, 1006, 1150
BspHI TCATGA 1 cut(s) 1125
BspLI GGNNCC 3 cut(s) 57, 443, 783
BspMI ACCTGC 1 cut(s) 707
BspPI GGATC 2 cut(s) 124, 1154
BsrDI GCAATG 1 cut(s) 831
BsrI ACTGG 5 cut(s) 62, 407, 513, 845, 993
BssECI CCNNGG 4 cut(s) 111, 245, 816, 1055
BssMI GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
BssSI CACGAG 1 cut(s) 861
BssT1I CCWWGG 4 cut(s) 111, 245, 816, 1055
Bst2BI CACGAG 1 cut(s) 861
Bst2UI CCWGG 1 cut(s) 578
Bst6I CTCTTC 2 cut(s) 45, 72
BstBAI YACGTR 2 cut(s) 804, 908
BstC8I GCNNGC 4 cut(s) 154, 185, 500, 1246
BstDEI CTNAG 3 cut(s) 423, 1014, 1137
BstDSI CCRYGG 1 cut(s) 111
BstF5I GGATG 2 cut(s) 107, 654
BstHHI GCGC 1 cut(s) 704
BstKTI GATC 8 cut(s) 119, 150, 753, 898, 1005, 1120, 1149, 1162
BstMAI GTCTC 1 cut(s) 345
BstMBI GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
BstMCI CGRYCG 1 cut(s) 1028
BstMWI GCNNNNNNNGC 2 cut(s) 582, 701
BstNI CCWGG 1 cut(s) 578
BstNSI RCATGY 3 cut(s) 308, 502, 1248
BstSCI CCNGG 1 cut(s) 576
BstSFI CTRYAG 2 cut(s) 137, 475
BstSNI TACGTA 1 cut(s) 908
BstV1I GCAGC 1 cut(s) 145
BstX2I RGATCY 3 cut(s) 116, 1117, 1159
BstYI RGATCY 3 cut(s) 116, 1117, 1159
BstZI CGGCCG 1 cut(s) 1025
BsuRI GGCC 2 cut(s) 784, 1027
BtgI CCRYGG 1 cut(s) 111
BtrI CACGTC 1 cut(s) 964
BtsCI GGATG 2 cut(s) 107, 654
BtsIMutI CAGTG 3 cut(s) 69, 408, 530
BveI ACCTGC 1 cut(s) 707
Cac8I GCNNGC 4 cut(s) 154, 185, 500, 1246
CciI TCATGA 1 cut(s) 1125
CfoI GCGC 1 cut(s) 704
Cfr13I GGNCC 3 cut(s) 23, 442, 782
CseI GACGC 1 cut(s) 921
Csp6I GTAC 7 cut(s) 172, 202, 406, 489, 516, 1044, 1060
CviQI GTAC 7 cut(s) 172, 202, 406, 489, 516, 1044, 1060
DdeI CTNAG 3 cut(s) 423, 1014, 1137
DpnI GATC 8 cut(s) 118, 149, 752, 897, 1004, 1119, 1148, 1161
DpnII GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
DrdI GACNNNNNNGTC 1 cut(s) 359
DseDI GACNNNNNNGTC 1 cut(s) 359
EaeI YGGCCR 1 cut(s) 1025
EagI CGGCCG 1 cut(s) 1025
Eam1104I CTCTTC 2 cut(s) 45, 72
EarI CTCTTC 2 cut(s) 45, 72
EclXI CGGCCG 1 cut(s) 1025
Eco105I TACGTA 1 cut(s) 908
Eco130I CCWWGG 4 cut(s) 111, 245, 816, 1055
Eco47I GGWCC 2 cut(s) 23, 442
Eco52I CGGCCG 1 cut(s) 1025
EcoRI GAATTC 1 cut(s) 458
EcoRII CCWGG 1 cut(s) 576
EcoT14I CCWWGG 4 cut(s) 111, 245, 816, 1055
ErhI CCWWGG 4 cut(s) 111, 245, 816, 1055
FalI AAGNNNNNCTT 2 cut(s) 379, 411
FaqI GGGAC 3 cut(s) 355, 455, 657
FbaI TGATCA 1 cut(s) 895
FblI GTMKAC 3 cut(s) 9, 42, 910
Fnu4HI GCNGC 1 cut(s) 134
FokI GGATG 2 cut(s) 94, 641
Fsp4HI GCNGC 1 cut(s) 134
FspBI CTAG 4 cut(s) 92, 449, 503, 1157
GlaI GCGC 1 cut(s) 703
GluI GCNGC 1 cut(s) 134
GsaI CCCAGC 2 cut(s) 342, 1241
GsuI CTGGAG 2 cut(s) 45, 828
HaeIII GGCC 2 cut(s) 784, 1027
HapII CCGG 1 cut(s) 1028
HgaI GACGC 1 cut(s) 921
HhaI GCGC 1 cut(s) 704
Hin6I GCGC 1 cut(s) 702
HinP1I GCGC 1 cut(s) 702
HincII GTYRAC 3 cut(s) 10, 43, 835
HindII GTYRAC 3 cut(s) 10, 43, 835
HinfI GANTC 4 cut(s) 191, 425, 874, 956
HpaII CCGG 1 cut(s) 1028
HphI GGTGA 5 cut(s) 718, 745, 1012, 1186, 1218
Hpy166II GTNNAC 6 cut(s) 10, 43, 408, 835, 911, 1022
Hpy188I TCNGA 4 cut(s) 601, 961, 1092, 1140
Hpy188III TCNNGA 4 cut(s) 163, 893, 899, 1126
Hpy8I GTNNAC 6 cut(s) 10, 43, 408, 835, 911, 1022
Hpy99I CGWCG 2 cut(s) 47, 489
HpyAV CCTTC 4 cut(s) 170, 668, 916, 1277
HpyCH4IV ACGT 3 cut(s) 803, 907, 963
HpyCH4V TGCA 3 cut(s) 274, 330, 585
HpyF10VI GCNNNNNNNGC 2 cut(s) 582, 701
HpyF3I CTNAG 3 cut(s) 423, 1014, 1137
HpySE526I ACGT 3 cut(s) 803, 907, 963
HspAI GCGC 1 cut(s) 702
Ksp22I TGATCA 1 cut(s) 895
Kzo9I GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
LmnI GCTCC 3 cut(s) 55, 925, 1253
Lsp1109I GCAGC 1 cut(s) 145
LweI GCATC 4 cut(s) 220, 231, 675, 732
MaeI CTAG 4 cut(s) 92, 449, 503, 1157
MaeII ACGT 3 cut(s) 803, 907, 963
MaeIII GTNAC 2 cut(s) 389, 1195
MalI GATC 8 cut(s) 118, 149, 752, 897, 1004, 1119, 1148, 1161
MboI GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
MboII GAAGA 8 cut(s) 59, 62, 89, 235, 250, 751, 1043, 1215
MflI RGATCY 3 cut(s) 116, 1117, 1159
MluCI AATT 3 cut(s) 266, 458, 1067
MlyI GAGTC 3 cut(s) 185, 434, 950
MroXI GAANNNNTTC 1 cut(s) 888
MseI TTAA 4 cut(s) 29, 572, 719, 1164
MslI CAYNNNNRTG 1 cut(s) 617
MspA1I CMGCKG 1 cut(s) 1237
MspI CCGG 1 cut(s) 1028
MspR9I CCNGG 1 cut(s) 578
MvaI CCWGG 1 cut(s) 578
MwoI GCNNNNNNNGC 2 cut(s) 582, 701
NcoI CCATGG 1 cut(s) 111
NdeII GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
NlaIV GGNNCC 3 cut(s) 57, 443, 783
NmuCI GTSAC 1 cut(s) 1195
NspI RCATGY 3 cut(s) 308, 502, 1248
PaeI GCATGC 2 cut(s) 502, 1248
PagI TCATGA 1 cut(s) 1125
PaqCI CACCTGC 1 cut(s) 707
PciI ACATGT 1 cut(s) 304
PdmI GAANNNNTTC 1 cut(s) 888
PfeI GAWTC 1 cut(s) 874
PflMI CCANNNNNTGG 2 cut(s) 20, 712
PkrI GCNGC 1 cut(s) 135
PleI GAGTC 3 cut(s) 185, 433, 950
PpsI GAGTC 3 cut(s) 185, 433, 950
Ppu21I YACGTR 2 cut(s) 804, 908
PscI ACATGT 1 cut(s) 304
Psp6I CCWGG 1 cut(s) 576
PspFI CCCAGC 2 cut(s) 338, 1237
PspGI CCWGG 1 cut(s) 576
PspN4I GGNNCC 3 cut(s) 57, 443, 783
PspPI GGNCC 3 cut(s) 23, 442, 782
PsuI RGATCY 3 cut(s) 116, 1117, 1159
RsaI GTAC 7 cut(s) 173, 203, 407, 490, 517, 1045, 1061
RsaNI GTAC 7 cut(s) 172, 202, 406, 489, 516, 1044, 1060
RseI CAYNNNNRTG 1 cut(s) 617
SalI GTCGAC 2 cut(s) 8, 41
SaqAI TTAA 4 cut(s) 29, 572, 719, 1164
SatI GCNGC 1 cut(s) 134
Sau3AI GATC 8 cut(s) 116, 147, 750, 895, 1002, 1117, 1146, 1159
Sau96I GGNCC 3 cut(s) 23, 442, 782
SchI GAGTC 3 cut(s) 185, 434, 950
ScrFI CCNGG 1 cut(s) 578
SfaNI GCATC 4 cut(s) 220, 231, 675, 732
SfcI CTRYAG 2 cut(s) 137, 475
SinI GGWCC 2 cut(s) 23, 442
SmiMI CAYNNNNRTG 1 cut(s) 617
SmlI CTYRAG 1 cut(s) 929
SmoI CTYRAG 1 cut(s) 929
SnaBI TACGTA 1 cut(s) 908
SphI GCATGC 2 cut(s) 502, 1248
Sse9I AATT 3 cut(s) 266, 458, 1067
SsiI CCGC 2 cut(s) 1075, 1235
SspMI CTAG 4 cut(s) 92, 449, 503, 1157
StyD4I CCNGG 1 cut(s) 576
StyI CCWWGG 4 cut(s) 111, 245, 816, 1055
TaiI ACGT 3 cut(s) 806, 910, 966
TaqI TCGA 9 cut(s) 9, 42, 75, 279, 296, 417, 546, 1005, 1152
TasI AATT 3 cut(s) 266, 458, 1067
TatI WGTACW 1 cut(s) 201
TfiI GAWTC 1 cut(s) 874
Tru1I TTAA 4 cut(s) 29, 572, 719, 1164
Tru9I TTAA 4 cut(s) 29, 572, 719, 1164
TscAI CASTG 3 cut(s) 69, 415, 530
TseFI GTSAC 1 cut(s) 1195
TseI GCWGC 1 cut(s) 133
Tsp45I GTSAC 1 cut(s) 1195
TspDTI ATGAA 8 cut(s) 17, 259, 307, 549, 558, 1052, 1069, 1142
TspGWI ACGGA 3 cut(s) 184, 598, 1109
TspRI CASTG 3 cut(s) 69, 415, 530
Van91I CCANNNNNTGG 2 cut(s) 20, 712
VpaK11BI GGWCC 2 cut(s) 23, 442
XapI RAATTY 3 cut(s) 266, 458, 1067
XceI RCATGY 3 cut(s) 308, 502, 1248
XmiI GTMKAC 3 cut(s) 9, 42, 910
XmnI GAANNNNTTC 1 cut(s) 888
XspI CTAG 4 cut(s) 92, 449, 503, 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.