pycom17g25090

Helicase-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
23249026 .. 23253050
4025 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g25090.2

Sequence Viewer

Length: 3921 bp
ATGGCATCAAGAAAGGATCAAGCTGTTCCTGCAATCAAAGCAAAGAACAAGAACATCATCGCCGCAAGTGGTGATATTTCGGGCATCATAACCCGAAGTAAGGCAAGAGCTCTTTTTGCTGCGGCTTCCGCCCCTGCATTAACTCTGTCAAAGGAACAAGAGCACTTGAGGTATGAGCCTGTGATCACCTTAGCCTCGCTAAGGGCATCAAAGGGGGAAAGCCCGAGGAAATACTCAGAGTCCCTACTCTCCGACGCTGATTCGAGCGGCAGTACAACCATGCAAGTCATGACCACTGGAGCAACTTCAATCGAGGAGCAGCTAGCTCAGATGAATGAAGCAATCGCAAGGCTCACACGGACTGTGGAAGAGAAGGACTTGCAGATTGCCGCACTTGTCAACCAACTAGATGCGCTGCCCGACGTGAAAGTCGACCCAAATATTGGCCTATTAAAGAAAGAAGACGACGAAGAAGAAGAGCCACCAGCGGAGAAAGTTGAAGAGAAGCCGAAGCTAGACCAAGCAATGGCATCCATGGGATCTCTCTCTATCCAGCAGCTACAGGAGATGATCGCAAGCACTGTCAAGACACAGTACGAAGGAAGCTCGCATGACTCCGTACTGTACTCAAAGCCTTACTCCAAGAAGATTGATGCTTTAAAGATGCCAAGGGGTTATCAGCCCCCAAAATTCATGCAGTTCGATGGAAAAGGCAACCCGAAGCAACATGTCGCCCATTTCATTGAAACTTGCAACAATGCTGGGACAGAGGGAGACTACCTCGTCAAACAGTTCGTGCGTTCGCTGAAAAGTAACGCTTTTGACTGGTACACTGACCTCGAACCTGAGTCTATCAACAGTTGGGACCAGCTAGAAAGGGAATTCCTCAACCGTTTCTACAGCACTCGTCGTACTGTAAGCATGCTAGAGCTGACCAGTACGAAACAGTGGAGAGATGAACCTGTCGTCAACTACATAAATAGATGGCGCTCCTTAAGTCTGGATTGCAAAGATCGACTTTCTGAAACCTCTGCCATTGAGATGTGCGTTCAAGGCATGCACTGGGGGTTACATTACATCCTCCAAGGTATAAAACCAAGAACATTCGAAGAGCTAGCAACTCGTTCCCACGACATGGAGCTGAGTATCGCTAATCATGGGAAAAAGGAGCCAATTACTAACTTCAATAAGGAGAAAGTATTCGCCCCAAATGTAGACAAGACCGGGAAGAAGCCCGCTAAGGAAGCTTTCACCGTCAACACTACCCCCATCAAGACCTCCTCAGCGCCCATCAAGACCTCCTCAGCGCCCATCAAGATCTCCTCCAAGAAGAAAGCGAAGGAGATAAAGACAAGTGAGCCTTCTCGCACCCAAGACAGATACAAGAGCACCTTGAGAGAGTTGGAACAGAAAACGTACCCTTTTCCTGACTCTGACATGGCTGCCATGTTAGATGACTTGCTGGAAAAAAAGGTGATTGAGCTACCCGAATGCAAGCGTCCTGAAGAAATGAATCGCACAAACGATCCTAGGTACTGCAAGTACCATCGTATTGTGAGCCATCCTGTTGGCAAGTGCTTCGTTCTCAAAGAACTCATCATGAAGCTAGCACAACAAGGGCAAATTGAGCTCGACCTTGAGGACACGGCCGCAACGCATACCACTACAATTGCGTTTGGATCGTTTAATCCTGTGCCTCTCCAAATGACACCTGACCGTTCTCGTGAATGCTTAAGTTGCACGGCACCTCCTACACAACCATCACTGGAGAGAAGCGACCAAGATACACATGCTGATGATGAAGAAGGATGGATATTGGTAACCTACAAAAAGACAAGGAAACCAAGACCACAAGTCATACAGCCAAAGGTGGAACAAAGAAGAAATCACCACGGCCGCAACAATGCGAAGCCTAAAAGAAACATAAAGCATAATAAAACAACATATGCTAGGGAACCTATGGAGCAGGAGCCACGCATTCCCGTTTCCTTGCGTGAGTACTTCCCGAATGACTTTTTCCAACAGTGCACTACCGTGGCCTGTCACATGGTTGAAGTAGAAATAGAAGAGCCCTCAAAAGGCAAAGCTATCGCCACTAAGGTAGAAAAGACCCTTACACCTGGAGAAGGTCTGCCAACACACTTTAGCATCGAGGAAGCGCTACCATTGCCAAAAAAGATGCGAAGAGCACTAGCAGCAGTCTTGGCAGGTCCCGACGACCACGAAGAGCAAGAAAGTAACGACGAAGGCTCGAAGCTTCAGCCACATGAATGTGCCACATGTTGTGCCACCCATGACGTAATTAACTTCACTGACGAAGACCTACTGTTGGGATCAAAGCCTCACAACCGTCCCCTCTTCGTCTCCGGGTACATAAAGGAATACAAAGTCAACCGCATGCTTGTGGATGGTGGGTCGGCCATAAACATCATGCCAAAATCAACAATGACCATAATCGGCATCAAGGTGAATGAACTATCCCTGAGCCGTCTGCTGATCCAGGGTTTTAACCAAGGAGGACAAAGGGCGATAGGCATGATCCGAGTAGAGATGACCATGGGTGAGCTCAAATCAAGCACGATATTCCACGTAATTGATGCAAGAACTTCCTATAGCTTGCTCTTAGGAAGACCTTGGATCCACGCAAATGGGGTAGTGCCGTCCACCCTTCACCAATGCCTAAAATTTTACCGAGAAGGAGTGAAGGTGATCCAAGGTGATACCAAGCCATTCACCGAAGCCGAATCACACTTTGCAGATGCCAAGTTCTACATGGATGAAGAGACGGTACCCGAAGCCCTTTCGGAAGAGATCAAATCCACGGGCAGAGCAGCACCTAAAAAGCAGGAGTGGCAAGCCATGCCTAAAAAGCAAAAAGAGCAGGCCGTGCCATCTTCAAGCAAAGACGATGACGAGCTTGCTAAACCTGCAACAACCAAAGGGAGTAGGATGCCGTCAGAAGGACCGAACGCACCCATATTCCGGTATATCCCAATGTCAAGAAGAAAGAATGGTCAATCTCCATTCGAAACTAGAAAAGCCGATACACAGTGGCACACGGATAATGTGAACTTGCTCAAGACAAATGCAGTTTTGCCTTTGACACAGCTCGGGGGTGCTAAGGTCGCAAGACTATCACAAGGCTTCATGAAAGCTCTACCAAAGAAGGTGGAATCAAGCTTTCTTCCAACCAAGAGGACCGAGGAAGGTTTCGACCCTAACGCCTACAAACTCATGTCAAAGGCCGGGTACGACTTCGCTTCTTCTGCGGTGGCTGGAAAGAAGGTTTCAAACACTGTCAATGACGAAGAACGTAACCTCACCAAAACTCAAAAGAAGTTGAAGGAGCATGGTTACGGAGTTGACAACAACAAAGCCGGACTTGGTTTCACACCAAATGCACCTGTGATGATTTCAAGCCAAGCGAAAAACACTAGCACTCAATATGTCAGCATGAGCATTGAACAAGACCAAGAAGAGCCTAAACCTTCCCATCGGACGTCGGTCTTCGATAGGATGAGCCAGTCAAGCTCCAGAACTTCAGTGTTTAATCGCATTGGTGGTCAAGACCGAACCTCTGTCTTCAAGAGGCTTAAAGCGCCGACATCCCAAAGCTCTGTTTTTGAAAGGTTGTTAAAGCTTAAGAAACAAAGCAACACAGTTATCTCTCCTGTGCAACGATCAGCTTCAGAAAGATTTGAAGATAATGAGAAGCCTTTTGGAAAGAGGAAGACAACACCAAAGGGAGAAAAGCTCGATGGGTTAGGAGGAAAAGACGACGTTCGAAGCTTGATTCCTTCAAGGATGAAGCGCCAAGCAATCCTAGAGGTTGACACAAAAGGACCATTGAAGGTAAGGAGGCGCATCATCGTCCACACTGGCAAATCTTCATGCCAACAAACCCAAGAGAACGTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1307

Amino Acids

146.54

Weight (kDa)

9.12

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 428, 782
AatII GACGTC 1 cut(s) 3503
Acc36I ACCTGC 2 cut(s) 2198, 2935
Acc65I GGTACC 1 cut(s) 2788
AccB1I GGYRCC 2 cut(s) 1744, 2788
AccB7I CCANNNNNTGG 3 cut(s) 443, 526, 1135
AccBSI CCGCTC 1 cut(s) 267
AccI GTMKAC 2 cut(s) 432, 1215
AcoI YGGCCR 3 cut(s) 1647, 1894, 2418
AcsI RAATTY 3 cut(s) 689, 881, 2684
AcuI CTGAAG 4 cut(s) 1524, 2243, 3525, 3672
AcyI GRCGYC 1 cut(s) 3500
AfeI AGCGCT 1 cut(s) 2160
AflII CTTAAG 3 cut(s) 994, 1732, 3641
AflIII ACRYGT 2 cut(s) 727, 2279
AhdI GACNNNNNGTC 1 cut(s) 1853
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 2 cut(s) 2119, 2499
AleI CACNNNNGTG 1 cut(s) 2033
Alw21I GWGCWC 7 cut(s) 112, 165, 1391, 1632, 2030, 2191, 2568
Alw26I GTCTC 3 cut(s) 768, 2368, 2777
Alw44I GTGCAC 1 cut(s) 2026
Ama87I CYCGRG 2 cut(s) 223, 3110
Aor51HI AGCGCT 1 cut(s) 2160
AoxI GGCC 7 cut(s) 445, 1647, 1894, 2037, 2418, 2883, 3243
ApaLI GTGCAC 1 cut(s) 2026
ApeKI GCWGC 7 cut(s) 119, 319, 415, 556, 1442, 2195, 2831
ApoI RAATTY 3 cut(s) 689, 881, 2684
Asp700I GAANNNNTTC 1 cut(s) 1199
Asp718I GGTACC 1 cut(s) 2788
AspA2I CCTAGG 1 cut(s) 1529
AspLEI GCGC 8 cut(s) 415, 990, 1288, 1309, 2161, 3601, 3813, 3864
AspS9I GGNCC 5 cut(s) 865, 2210, 2963, 3198, 3842
AsuC2I CCSGG 3 cut(s) 1225, 2368, 3247
AsuII TTCGAA 3 cut(s) 1107, 3027, 3784
AsuNHI GCTAGC 3 cut(s) 322, 1114, 1606
AvaI CYCGRG 2 cut(s) 223, 3110
AvaII GGWCC 5 cut(s) 865, 2210, 2963, 3198, 3842
AvrII CCTAGG 1 cut(s) 1529
BaeGI GKGCMC 1 cut(s) 2030
BamHI GGATCC 1 cut(s) 2637
BanI GGYRCC 2 cut(s) 1744, 2788
BanII GRGCYC 4 cut(s) 112, 1632, 2073, 2568
BarI GAAGNNNNNNTAC 2 cut(s) 2772, 2804
BauI CACGAG 1 cut(s) 1722
BbsI GAAGAC 6 cut(s) 468, 2325, 2635, 3499, 3574, 3737
Bbv12I GWGCWC 7 cut(s) 112, 165, 1391, 1632, 2030, 2191, 2568
BbvCI CCTCAGC 2 cut(s) 1282, 1303
BbvI GCAGC 7 cut(s) 106, 331, 402, 568, 1429, 2207, 2843
BceAI ACGGC 7 cut(s) 1662, 1758, 1909, 2472, 2644, 2870, 2938
BcgI CGANNNNNNTGC 4 cut(s) 1561, 1595, 2071, 2105
BciT130I CCWGG 2 cut(s) 2121, 2501
BclI TGATCA 1 cut(s) 183
BcnI CCSGG 3 cut(s) 1225, 2368, 3247
BcoDI GTCTC 3 cut(s) 768, 2368, 2777
BfmI CTRYAG 3 cut(s) 560, 898, 2611
BfoI RGCGCY 6 cut(s) 991, 1289, 1310, 2162, 3602, 3814
BfrI CTTAAG 3 cut(s) 994, 1732, 3641
BfuAI ACCTGC 2 cut(s) 2198, 2935
BglII AGATCT 1 cut(s) 1317
BlnI CCTAGG 1 cut(s) 1529
BmcAI AGTACT 1 cut(s) 2000
Bme1390I CCNGG 5 cut(s) 1225, 2121, 2368, 2501, 3247
Bme18I GGWCC 5 cut(s) 865, 2210, 2963, 3198, 3842
BmeRI GACNNNNNGTC 1 cut(s) 1853
BmeT110I CYCGRG 2 cut(s) 223, 3110
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 5 cut(s) 865, 2210, 2963, 3198, 3842
BmiI GGNNCC 8 cut(s) 866, 1170, 1746, 1956, 1971, 2212, 2639, 2790
BmrFI CCNGG 5 cut(s) 1225, 2121, 2368, 2501, 3247
BmrI ACTGGG 1 cut(s) 1072
BmtI GCTAGC 3 cut(s) 326, 1118, 1610
BmuI ACTGGG 1 cut(s) 1072
BoxI GACNNNNGTC 1 cut(s) 3503
BpiI GAAGAC 6 cut(s) 468, 2325, 2635, 3499, 3574, 3737
BplI GAGNNNNNCTC 4 cut(s) 765, 797, 3738, 3770
BpmI CTGGAG 4 cut(s) 318, 1787, 2142, 3517
Bpu10I CCTNAGC 7 cut(s) 190, 200, 1239, 1282, 1303, 2483, 3120
Bpu14I TTCGAA 3 cut(s) 1107, 3027, 3784
BpuEI CTTGAG 4 cut(s) 187, 1414, 1658, 3062
BpuMI CCSGG 3 cut(s) 1225, 2368, 3247
BsaAI YACGTR 1 cut(s) 2590
BsaHI GRCGYC 1 cut(s) 3500
BsaWI WCCGGW 1 cut(s) 2982
BsaXI ACNNNNNCTCC 4 cut(s) 1732, 1762, 2691, 2721
Bse1I ACTGG 7 cut(s) 301, 830, 936, 1067, 1770, 3523, 3883
Bse3DI GCAATG 2 cut(s) 531, 2165
BseBI CCWGG 2 cut(s) 2121, 2501
BseMI GCAATG 2 cut(s) 531, 2165
BseMII CTCAG 7 cut(s) 249, 341, 837, 1133, 1296, 1317, 2474
BseNI ACTGG 7 cut(s) 301, 830, 936, 1067, 1770, 3523, 3883
BseRI GAGGAG 4 cut(s) 329, 1270, 1291, 1312
BseSI GKGCMC 1 cut(s) 2030
BseX3I CGGCCG 2 cut(s) 1647, 1894
BseXI GCAGC 7 cut(s) 106, 331, 402, 568, 1429, 2207, 2843
BseYI CCCAGC 1 cut(s) 761
Bsh1285I CGRYCG 2 cut(s) 1650, 1897
BshFI GGCC 7 cut(s) 447, 1649, 1896, 2039, 2420, 2885, 3245
BshNI GGYRCC 2 cut(s) 1744, 2788
BsiEI CGRYCG 2 cut(s) 1650, 1897
BsiHKAI GWGCWC 7 cut(s) 112, 165, 1391, 1632, 2030, 2191, 2568
BsiHKCI CYCGRG 2 cut(s) 223, 3110
BsiSI CCGG 5 cut(s) 1224, 2367, 2983, 3246, 3378
BslFI GGGAC 5 cut(s) 226, 778, 878, 2196, 2337
BsmAI GTCTC 3 cut(s) 768, 2368, 2777
BsmBI CGTCTC 2 cut(s) 2368, 2777
BsmFI GGGAC 5 cut(s) 226, 778, 878, 2196, 2337
BsmI GAATGC 3 cut(s) 1496, 1733, 1977
BsnI GGCC 7 cut(s) 447, 1649, 1896, 2039, 2420, 2885, 3245
BsoBI CYCGRG 2 cut(s) 223, 3110
Bsp119I TTCGAA 3 cut(s) 1107, 3027, 3784
Bsp1286I GDGCHC 8 cut(s) 112, 165, 1391, 1632, 2030, 2073, 2191, 2568
Bsp19I CCATGG 2 cut(s) 534, 2556
BspANI GGCC 7 cut(s) 447, 1649, 1896, 2039, 2420, 2885, 3245
BspCNI CTCAG 7 cut(s) 248, 340, 838, 1134, 1295, 1316, 2475
BspHI TCATGA 3 cut(s) 288, 1599, 3147
BspLI GGNNCC 8 cut(s) 866, 1170, 1746, 1956, 1971, 2212, 2639, 2790
BspMI ACCTGC 2 cut(s) 2198, 2935
BspOI GCTAGC 3 cut(s) 326, 1118, 1610
BspQI GCTCTTC 6 cut(s) 471, 1104, 2061, 2179, 2220, 3471
BspT104I TTCGAA 3 cut(s) 1107, 3027, 3784
BspT107I GGYRCC 2 cut(s) 1744, 2788
BspTI CTTAAG 3 cut(s) 994, 1732, 3641
BsrBI CCGCTC 1 cut(s) 267
BsrDI GCAATG 2 cut(s) 531, 2165
BsrI ACTGG 7 cut(s) 301, 830, 936, 1067, 1770, 3523, 3883
BssNI GRCGYC 1 cut(s) 3500
BssSI CACGAG 1 cut(s) 1722
BssT1I CCWWGG 8 cut(s) 534, 668, 1084, 1529, 2512, 2556, 2633, 2713
Bst2BI CACGAG 1 cut(s) 1722
Bst2UI CCWGG 2 cut(s) 2121, 2501
BstACI GRCGYC 1 cut(s) 3500
BstAFI CTTAAG 3 cut(s) 994, 1732, 3641
BstAPI GCANNNNNTGC 2 cut(s) 2860, 2887
BstBAI YACGTR 1 cut(s) 2590
BstBI TTCGAA 3 cut(s) 1107, 3027, 3784
BstDSI CCRYGG 5 cut(s) 534, 1891, 2034, 2556, 2820
BstEII GGTNACC 1 cut(s) 1819
BstENI CCTNNNNNAGG 2 cut(s) 199, 2124
BstH2I RGCGCY 6 cut(s) 991, 1289, 1310, 2162, 3602, 3814
BstHHI GCGC 8 cut(s) 415, 990, 1288, 1309, 2161, 3601, 3813, 3864
BstMAI GTCTC 3 cut(s) 768, 2368, 2777
BstMCI CGRYCG 2 cut(s) 1650, 1897
BstNI CCWGG 2 cut(s) 2121, 2501
BstNSI RCATGY 6 cut(s) 731, 925, 1060, 1793, 2283, 2401
BstPAI GACNNNNGTC 1 cut(s) 3503
BstPI GGTNACC 1 cut(s) 1819
BstSCI CCNGG 5 cut(s) 1223, 2119, 2366, 2499, 3245
BstSFI CTRYAG 3 cut(s) 560, 898, 2611
BstSLI GKGCMC 1 cut(s) 2030
BstV1I GCAGC 7 cut(s) 106, 331, 402, 568, 1429, 2207, 2843
BstV2I GAAGAC 6 cut(s) 468, 2325, 2635, 3499, 3574, 3737
BstX2I RGATCY 3 cut(s) 539, 1317, 2637
BstXI CCANNNNNNTGG 2 cut(s) 1568, 2648
BstYI RGATCY 3 cut(s) 539, 1317, 2637
BstZI CGGCCG 2 cut(s) 1647, 1894
BsuRI GGCC 7 cut(s) 447, 1649, 1896, 2039, 2420, 2885, 3245
BtgI CCRYGG 5 cut(s) 534, 1891, 2034, 2556, 2820
BtgZI GCGATG 1 cut(s) 43
BtrI CACGTC 1 cut(s) 424
BveI ACCTGC 2 cut(s) 2198, 2935
CciI TCATGA 3 cut(s) 288, 1599, 3147
CfoI GCGC 8 cut(s) 415, 990, 1288, 1309, 2161, 3601, 3813, 3864
Cfr13I GGNCC 5 cut(s) 865, 2210, 2963, 3198, 3842
CseI GACGC 2 cut(s) 263, 1487
CspCI CAANNNNNGTGG 4 cut(s) 1651, 1686, 3150, 3185
DraI TTTAAA 1 cut(s) 660
DrdI GACNNNNNNGTC 2 cut(s) 428, 782
DriI GACNNNNNGTC 1 cut(s) 1853
DseDI GACNNNNNNGTC 2 cut(s) 428, 782
EaeI YGGCCR 3 cut(s) 1647, 1894, 2418
EagI CGGCCG 2 cut(s) 1647, 1894
Eam1105I GACNNNNNGTC 1 cut(s) 1853
EciI GGCGGA 1 cut(s) 118
Ecl136II GAGCTC 3 cut(s) 110, 1630, 2566
EclXI CGGCCG 2 cut(s) 1647, 1894
Eco130I CCWWGG 8 cut(s) 534, 668, 1084, 1529, 2512, 2556, 2633, 2713
Eco24I GRGCYC 4 cut(s) 112, 1632, 2073, 2568
Eco47I GGWCC 5 cut(s) 865, 2210, 2963, 3198, 3842
Eco47III AGCGCT 1 cut(s) 2160
Eco52I CGGCCG 2 cut(s) 1647, 1894
Eco53kI GAGCTC 3 cut(s) 110, 1630, 2566
Eco57I CTGAAG 4 cut(s) 1524, 2243, 3525, 3672
Eco88I CYCGRG 2 cut(s) 223, 3110
Eco91I GGTNACC 1 cut(s) 1819
EcoICRI GAGCTC 3 cut(s) 110, 1630, 2566
EcoNI CCTNNNNNAGG 2 cut(s) 199, 2124
EcoO109I RGGNCCY 1 cut(s) 2210
EcoO65I GGTNACC 1 cut(s) 1819
EcoRI GAATTC 1 cut(s) 881
EcoRII CCWGG 2 cut(s) 2119, 2499
EcoT14I CCWWGG 8 cut(s) 534, 668, 1084, 1529, 2512, 2556, 2633, 2713
EcoT38I GRGCYC 4 cut(s) 112, 1632, 2073, 2568
ErhI CCWWGG 8 cut(s) 534, 668, 1084, 1529, 2512, 2556, 2633, 2713
Esp3I CGTCTC 2 cut(s) 2368, 2777
FaqI GGGAC 5 cut(s) 226, 778, 878, 2196, 2337
FauI CCCGC 1 cut(s) 1243
FauNDI CATATG 1 cut(s) 1945
FbaI TGATCA 1 cut(s) 183
FblI GTMKAC 2 cut(s) 432, 1215
FriOI GRGCYC 4 cut(s) 112, 1632, 2073, 2568
GlaI GCGC 8 cut(s) 414, 989, 1287, 1308, 2160, 3600, 3812, 3863
GsaI CCCAGC 1 cut(s) 765
GsuI CTGGAG 4 cut(s) 318, 1787, 2142, 3517
HaeII RGCGCY 6 cut(s) 991, 1289, 1310, 2162, 3602, 3814
HaeIII GGCC 7 cut(s) 447, 1649, 1896, 2039, 2420, 2885, 3245
HapII CCGG 5 cut(s) 1224, 2367, 2983, 3246, 3378
HgaI GACGC 2 cut(s) 263, 1487
HhaI GCGC 8 cut(s) 415, 990, 1288, 1309, 2161, 3601, 3813, 3864
Hin1I GRCGYC 1 cut(s) 3500
Hin6I GCGC 8 cut(s) 413, 988, 1286, 1307, 2159, 3599, 3811, 3862
HinP1I GCGC 8 cut(s) 413, 988, 1286, 1307, 2159, 3599, 3811, 3862
HincII GTYRAC 7 cut(s) 400, 433, 970, 1258, 2392, 3364, 3832
HindII GTYRAC 7 cut(s) 400, 433, 970, 1258, 2392, 3364, 3832
HindIII AAGCTT 5 cut(s) 1245, 2255, 3178, 3638, 3787
HinfI GANTC 9 cut(s) 239, 260, 614, 848, 1430, 1513, 2744, 3173, 3793
HpaII CCGG 5 cut(s) 1224, 2367, 2983, 3246, 3378
Hpy99I CGWCG 8 cut(s) 257, 425, 470, 912, 2219, 2246, 3505, 3782
HpyCH4IV ACGT 8 cut(s) 423, 1415, 2298, 2589, 3313, 3500, 3780, 3912
HpySE526I ACGT 8 cut(s) 423, 1415, 2298, 2589, 3313, 3500, 3780, 3912
Hsp92I GRCGYC 1 cut(s) 3500
HspAI GCGC 8 cut(s) 413, 988, 1286, 1307, 2159, 3599, 3811, 3862
KpnI GGTACC 1 cut(s) 2792
Ksp22I TGATCA 1 cut(s) 183
LguI GCTCTTC 6 cut(s) 471, 1104, 2061, 2179, 2220, 3471
LmnI GCTCC 9 cut(s) 299, 316, 995, 1138, 1168, 1963, 1969, 3346, 3536
Lsp1109I GCAGC 7 cut(s) 106, 331, 402, 568, 1429, 2207, 2843
MaeII ACGT 8 cut(s) 423, 1415, 2298, 2589, 3313, 3500, 3780, 3912
MaeIII GTNAC 7 cut(s) 812, 1068, 1819, 2042, 2237, 3314, 3353
MbiI CCGCTC 1 cut(s) 267
MfeI CAATTG 1 cut(s) 1668
MflI RGATCY 3 cut(s) 539, 1317, 2637
MhlI GDGCHC 8 cut(s) 112, 165, 1391, 1632, 2030, 2073, 2191, 2568
MluCI AATT 8 cut(s) 689, 881, 1173, 1623, 1668, 2301, 2592, 2684
MlyI GAGTC 4 cut(s) 248, 608, 857, 1424
MmeI TCCRAC 4 cut(s) 276, 1383, 2044, 3212
MroXI GAANNNNTTC 1 cut(s) 1199
MslI CAYNNNNRTG 8 cut(s) 1040, 1794, 2033, 2269, 2271, 2402, 2465, 2646
MspA1I CMGCKG 1 cut(s) 488
MspCI CTTAAG 3 cut(s) 994, 1732, 3641
MspI CCGG 5 cut(s) 1224, 2367, 2983, 3246, 3378
MspR9I CCNGG 5 cut(s) 1225, 2121, 2368, 2501, 3247
MunI CAATTG 1 cut(s) 1668
Mva1269I GAATGC 3 cut(s) 1496, 1733, 1977
MvaI CCWGG 2 cut(s) 2121, 2501
NciI CCSGG 3 cut(s) 1225, 2368, 3247
NcoI CCATGG 2 cut(s) 534, 2556
NdeI CATATG 1 cut(s) 1945
NheI GCTAGC 3 cut(s) 322, 1114, 1606
NlaIV GGNNCC 8 cut(s) 866, 1170, 1746, 1956, 1971, 2212, 2639, 2790
NmuCI GTSAC 1 cut(s) 2042
NspI RCATGY 6 cut(s) 731, 925, 1060, 1793, 2283, 2401
NspV TTCGAA 3 cut(s) 1107, 3027, 3784
OliI CACNNNNGTG 1 cut(s) 2033
PaeI GCATGC 3 cut(s) 925, 1060, 2401
PagI TCATGA 3 cut(s) 288, 1599, 3147
PciI ACATGT 2 cut(s) 727, 2279
PciSI GCTCTTC 6 cut(s) 471, 1104, 2061, 2179, 2220, 3471
PcsI WCGNNNNNNNCGW 1 cut(s) 429
PctI GAATGC 3 cut(s) 1496, 1733, 1977
PdmI GAANNNNTTC 1 cut(s) 1199
PfeI GAWTC 5 cut(s) 260, 1513, 2744, 3173, 3793
PflMI CCANNNNNTGG 3 cut(s) 443, 526, 1135
PleI GAGTC 4 cut(s) 247, 608, 856, 1424
PpsI GAGTC 4 cut(s) 247, 608, 856, 1424
Ppu21I YACGTR 1 cut(s) 2590
PpuMI RGGWCCY 1 cut(s) 2210
PscI ACATGT 2 cut(s) 727, 2279
PshAI GACNNNNGTC 1 cut(s) 3503
Psp124BI GAGCTC 3 cut(s) 112, 1632, 2568
Psp5II RGGWCCY 1 cut(s) 2210
Psp6I CCWGG 2 cut(s) 2119, 2499
PspEI GGTNACC 1 cut(s) 1819
PspFI CCCAGC 1 cut(s) 761
PspGI CCWGG 2 cut(s) 2119, 2499
PspN4I GGNNCC 8 cut(s) 866, 1170, 1746, 1956, 1971, 2212, 2639, 2790
PspPI GGNCC 5 cut(s) 865, 2210, 2963, 3198, 3842
PspPPI RGGWCCY 1 cut(s) 2210
PsuI RGATCY 3 cut(s) 539, 1317, 2637
RseI CAYNNNNRTG 8 cut(s) 1040, 1794, 2033, 2269, 2271, 2402, 2465, 2646
SacI GAGCTC 3 cut(s) 112, 1632, 2568
SalI GTCGAC 1 cut(s) 431
SapI GCTCTTC 6 cut(s) 471, 1104, 2061, 2179, 2220, 3471
Sau96I GGNCC 5 cut(s) 865, 2210, 2963, 3198, 3842
ScaI AGTACT 1 cut(s) 2000
SchI GAGTC 4 cut(s) 248, 608, 857, 1424
ScrFI CCNGG 5 cut(s) 1225, 2121, 2368, 2501, 3247
SduI GDGCHC 8 cut(s) 112, 165, 1391, 1632, 2030, 2073, 2191, 2568
SfcI CTRYAG 3 cut(s) 560, 898, 2611
SfuI TTCGAA 3 cut(s) 1107, 3027, 3784
SinI GGWCC 5 cut(s) 865, 2210, 2963, 3198, 3842
SmiMI CAYNNNNRTG 8 cut(s) 1040, 1794, 2033, 2269, 2271, 2402, 2465, 2646
SmlI CTYRAG 7 cut(s) 166, 994, 1393, 1637, 1732, 3077, 3641
SmoI CTYRAG 7 cut(s) 166, 994, 1393, 1637, 1732, 3077, 3641
SphI GCATGC 3 cut(s) 925, 1060, 2401
Sse9I AATT 8 cut(s) 689, 881, 1173, 1623, 1668, 2301, 2592, 2684
SspI AATATT 1 cut(s) 442
SstI GAGCTC 3 cut(s) 112, 1632, 2568
StyD4I CCNGG 5 cut(s) 1223, 2119, 2366, 2499, 3245
StyI CCWWGG 8 cut(s) 534, 668, 1084, 1529, 2512, 2556, 2633, 2713
TaiI ACGT 8 cut(s) 426, 1418, 2301, 2592, 3316, 3503, 3783, 3915
TaqII GACCGA 4 cut(s) 2980, 3215, 3493, 3585
TasI AATT 8 cut(s) 689, 881, 1173, 1623, 1668, 2301, 2592, 2684
TatI WGTACW 3 cut(s) 272, 624, 1998
TauI GCSGC 6 cut(s) 65, 125, 270, 392, 1652, 1899
TfiI GAWTC 5 cut(s) 260, 1513, 2744, 3173, 3793
TseFI GTSAC 1 cut(s) 2042
TseI GCWGC 7 cut(s) 119, 319, 415, 556, 1442, 2195, 2831
Tsp45I GTSAC 1 cut(s) 2042
TspGWI ACGGA 4 cut(s) 373, 607, 3074, 3372
Van91I CCANNNNNTGG 3 cut(s) 443, 526, 1135
Vha464I CTTAAG 3 cut(s) 994, 1732, 3641
VneI GTGCAC 1 cut(s) 2026
VpaK11BI GGWCC 5 cut(s) 865, 2210, 2963, 3198, 3842
XagI CCTNNNNNAGG 2 cut(s) 199, 2124
XapI RAATTY 3 cut(s) 689, 881, 2684
XceI RCATGY 6 cut(s) 731, 925, 1060, 1793, 2283, 2401
XcmI CCANNNNNNNNNTGG 1 cut(s) 2770
XmaJI CCTAGG 1 cut(s) 1529
XmiI GTMKAC 2 cut(s) 432, 1215
XmnI GAANNNNTTC 1 cut(s) 1199
ZraI GACGTC 1 cut(s) 3501
ZrmI AGTACT 1 cut(s) 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.