pycom07g27800

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000128
Physical Location & Seq
Forward (+)
27362509 .. 27363786
1278 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g27800.1

Sequence Viewer

Length: 1278 bp
ATGGAGCAGGAGCCACGCATTCCCGTTTCCTTGCGTGAGTACTTCCCGAATGACTTTTTCCAACAGTGCACTACCGTGGCCTGTCACATGGTTGAAGTAGAAATAGAAGAGCCCTCAAAAGGCAAAGCTATCGCCACTGAGGTAGAAAAGACCCTTACACCTGGAGAAGGTCTGCCAACACACTTTAGCATCGAAGAAGCGCTACCATTGCCAAAAAAGATGCGAAGAGCACTAGCAGCAGTCTTAGCAGGTCCCGACGACCACGAAGTGCAAGAAAGTAACGACAAAGGCTCGAAGCTTCAACCACATGAATGTGTCACATGTTGTGCCACCCATGACGTAATTAACTTCACTGACGAAGACCTACTGTTGGGATCAAAGCCTCACAACCGTCCTCTCTTCGTCTCCGGGTACATAAGGGAATACAAAGTTAACCGCATGCTTGTGGATGGTGGGTCGGCCATAAACATCATGCCAAAATCAACAATGACCATAATCGGCATCAAGGTGAATGAACTATCTCTGAGCCGTCTGCTGATCCAGGGTTTTAACCAAGGAAGACAAATGGCGATGGGCATGATCCGAGTAGAGATGACCATGGGTGAGCTCAAATCAAGCTCGATATTCCACGTGATTGATGCAAGAACTTCCTACAGACCTTGGATCCACGCAAATGGGGTAGTGCCGTCCACCCTTCATCAATGCCTAAAGTTTTACCGAGAAGGAGTGAAGGTGATTCAAGGTGACACCAAGCCATTCACCGAAACCGAATCACACTTTGCATATGCCAAGTTCTACATGGATGAAGAGACGGTACCCGAAGCCCTTCCGGAAGAGATCAAATCCACGGGCAGAGCAGCAATTAAAAACCAGGAGTGGCAAGCCATGCCTAAAAAGCAAAAAGAGCAGGCCGTGCCATCTTCAAGCAAAGATGATGACGAGTTTGCTAAACCTGCAACAACCAAAGGGAGTAGGATGCCATCAGAAGGACCGAACGCACCCATATTCTGGTATATCCCGATGTCAAGAAGAAAGAATGGTCAATCTCCATTCGAAACTAGAAAAGCCGACACACAGTGGCACACGGATAACGTGAAGTTGCTCAAGACGAATGCAGTTTTGCCTTTGACACAGCTCGGGGGTGCTAAGGCCGCAAGACTACCACAAGGCTTCATAAAAGCTCTACCAAAGAAGGTGGAATCAAGCTTTCTTCCAACCAAGAGGACCGAGGAAGGTTTCGACCCTAACGCCTACAAACTCATGTCAAAGGCCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Asp_protease_2 Retrotrans_gag

Protein Analysis

426

Amino Acids

47.64

Weight (kDa)

7.64

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 239, 961
Acc65I GGTACC 1 cut(s) 814
AccB1I GGYRCC 1 cut(s) 814
AccB7I CCANNNNNTGG 1 cut(s) 1008
AccIII TCCGGA 1 cut(s) 829
AciI CCGC 2 cut(s) 436, 1152
AclWI GGATC 5 cut(s) 382, 532, 574, 658, 671
AcoI YGGCCR 1 cut(s) 459
AcvI CACGTG 1 cut(s) 631
AdeI CACNNNGTG 2 cut(s) 268, 1077
AfaI GTAC 3 cut(s) 41, 413, 816
AfeI AGCGCT 1 cut(s) 201
AfiI CCNNNNNNNGG 5 cut(s) 119, 167, 370, 986, 1008
AflIII ACRYGT 1 cut(s) 320
AgsI TTSAA 4 cut(s) 95, 302, 740, 924
AjnI CCWGG 3 cut(s) 160, 540, 870
AleI CACNNNNGTG 1 cut(s) 74
AluBI AGCT 7 cut(s) 128, 298, 607, 618, 1135, 1181, 1206
AluI AGCT 7 cut(s) 128, 298, 607, 618, 1135, 1181, 1206
Alw21I GWGCWC 3 cut(s) 71, 232, 609
Alw26I GTCTC 2 cut(s) 409, 803
Alw44I GTGCAC 1 cut(s) 67
AlwI GGATC 5 cut(s) 382, 532, 574, 658, 671
Ama87I CYCGRG 1 cut(s) 1136
Aor13HI TCCGGA 1 cut(s) 829
Aor51HI AGCGCT 1 cut(s) 201
AoxI GGCC 5 cut(s) 78, 459, 909, 1149, 1269
ApaLI GTGCAC 1 cut(s) 67
ApeKI GCWGC 2 cut(s) 236, 857
Asp700I GAANNNNTTC 1 cut(s) 825
Asp718I GGTACC 1 cut(s) 814
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 3 cut(s) 251, 989, 1224
AsuC2I CCSGG 1 cut(s) 409
AsuHPI GGTGA 5 cut(s) 520, 614, 745, 751, 755
AsuII TTCGAA 1 cut(s) 1053
AvaI CYCGRG 1 cut(s) 1136
AvaII GGWCC 3 cut(s) 251, 989, 1224
BaeGI GKGCMC 1 cut(s) 71
BamHI GGATCC 1 cut(s) 663
BanI GGYRCC 1 cut(s) 814
BanII GRGCYC 2 cut(s) 114, 609
BarI GAAGNNNNNNTAC 4 cut(s) 186, 218, 798, 830
BbrPI CACGTG 1 cut(s) 631
BbsI GAAGAC 2 cut(s) 366, 565
Bbv12I GWGCWC 3 cut(s) 71, 232, 609
BbvI GCAGC 2 cut(s) 248, 869
BccI CCATC 4 cut(s) 443, 565, 925, 988
BceAI ACGGC 3 cut(s) 513, 670, 896
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BciT130I CCWGG 3 cut(s) 162, 542, 872
BcnI CCSGG 1 cut(s) 409
BcoDI GTCTC 2 cut(s) 409, 803
BfaI CTAG 2 cut(s) 233, 1059
BfmI CTRYAG 1 cut(s) 652
BfoI RGCGCY 1 cut(s) 203
BfuAI ACCTGC 2 cut(s) 239, 961
BisI GCNGC 3 cut(s) 237, 858, 1152
BlsI GCNGC 3 cut(s) 238, 859, 1153
BmcAI AGTACT 1 cut(s) 41
Bme1390I CCNGG 4 cut(s) 162, 409, 542, 872
Bme18I GGWCC 3 cut(s) 251, 989, 1224
BmeT110I CYCGRG 1 cut(s) 1136
BmgT120I GGNCC 3 cut(s) 251, 989, 1224
BmiI GGNNCC 4 cut(s) 12, 253, 665, 816
BmrFI CCNGG 4 cut(s) 162, 409, 542, 872
BmsI GCATC 5 cut(s) 198, 210, 510, 628, 966
BpiI GAAGAC 2 cut(s) 366, 565
BpmI CTGGAG 1 cut(s) 183
Bpu10I CCTNAGC 1 cut(s) 1146
Bpu14I TTCGAA 1 cut(s) 1053
BpuEI CTTGAG 1 cut(s) 1088
BpuMI CCSGG 1 cut(s) 409
BsaAI YACGTR 1 cut(s) 631
BsaJI CCNNGG 7 cut(s) 75, 541, 553, 597, 659, 846, 1227
BsaWI WCCGGW 1 cut(s) 829
BsaXI ACNNNNNCTCC 2 cut(s) 717, 747
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 167, 370, 986, 1008
Bse3DI GCAATG 1 cut(s) 206
BseAI TCCGGA 1 cut(s) 829
BseBI CCWGG 3 cut(s) 162, 542, 872
BseDI CCNNGG 7 cut(s) 75, 541, 553, 597, 659, 846, 1227
BseGI GGATG 3 cut(s) 454, 808, 981
BseLI CCNNNNNNNGG 5 cut(s) 119, 167, 370, 986, 1008
BseMI GCAATG 1 cut(s) 206
BseMII CTCAG 2 cut(s) 129, 515
BseSI GKGCMC 1 cut(s) 71
BseXI GCAGC 2 cut(s) 248, 869
BshFI GGCC 5 cut(s) 80, 461, 911, 1151, 1271
BshNI GGYRCC 1 cut(s) 814
BsiHKAI GWGCWC 3 cut(s) 71, 232, 609
BsiHKCI CYCGRG 1 cut(s) 1136
BsiSI CCGG 2 cut(s) 408, 830
BslFI GGGAC 1 cut(s) 237
BslI CCNNNNNNNGG 5 cut(s) 119, 167, 370, 986, 1008
BsmAI GTCTC 2 cut(s) 409, 803
BsmBI CGTCTC 2 cut(s) 409, 803
BsmFI GGGAC 1 cut(s) 237
BsmI GAATGC 2 cut(s) 18, 1117
BsnI GGCC 5 cut(s) 80, 461, 911, 1151, 1271
BsoBI CYCGRG 1 cut(s) 1136
Bsp119I TTCGAA 1 cut(s) 1053
Bsp1286I GDGCHC 4 cut(s) 71, 114, 232, 609
Bsp13I TCCGGA 1 cut(s) 829
Bsp143I GATC 5 cut(s) 374, 537, 579, 663, 837
Bsp19I CCATGG 1 cut(s) 597
BspACI CCGC 2 cut(s) 436, 1152
BspANI GGCC 5 cut(s) 80, 461, 911, 1151, 1271
BspCNI CTCAG 2 cut(s) 130, 516
BspEI TCCGGA 1 cut(s) 829
BspLI GGNNCC 4 cut(s) 12, 253, 665, 816
BspMI ACCTGC 2 cut(s) 239, 961
BspPI GGATC 5 cut(s) 382, 532, 574, 658, 671
BspQI GCTCTTC 2 cut(s) 102, 220
BspT104I TTCGAA 1 cut(s) 1053
BspT107I GGYRCC 1 cut(s) 814
BsrDI GCAATG 1 cut(s) 206
BssECI CCNNGG 7 cut(s) 75, 541, 553, 597, 659, 846, 1227
BssMI GATC 5 cut(s) 374, 537, 579, 663, 837
BssT1I CCWWGG 3 cut(s) 553, 597, 659
Bst2UI CCWGG 3 cut(s) 162, 542, 872
Bst4CI ACNGT 6 cut(s) 66, 76, 369, 392, 814, 1077
Bst6I CTCTTC 5 cut(s) 102, 220, 404, 801, 828
BstAPI GCANNNNNTGC 2 cut(s) 886, 913
BstBAI YACGTR 1 cut(s) 631
BstBI TTCGAA 1 cut(s) 1053
BstC8I GCNNGC 3 cut(s) 440, 882, 909
BstDEI CTNAG 4 cut(s) 138, 244, 524, 1146
BstDSI CCRYGG 3 cut(s) 75, 597, 846
BstENI CCTNNNNNAGG 1 cut(s) 165
BstF5I GGATG 3 cut(s) 454, 808, 981
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 1 cut(s) 202
BstKTI GATC 5 cut(s) 377, 540, 582, 666, 840
BstMAI GTCTC 2 cut(s) 409, 803
BstMBI GATC 5 cut(s) 374, 537, 579, 663, 837
BstMWI GCNNNNNNNGC 9 cut(s) 208, 236, 245, 886, 895, 904, 913, 953, 1151
BstNI CCWGG 3 cut(s) 162, 542, 872
BstNSI RCATGY 2 cut(s) 324, 442
BstSCI CCNGG 4 cut(s) 160, 407, 540, 870
BstSFI CTRYAG 1 cut(s) 652
BstSLI GKGCMC 1 cut(s) 71
BstV1I GCAGC 2 cut(s) 248, 869
BstV2I GAAGAC 2 cut(s) 366, 565
BstX2I RGATCY 1 cut(s) 663
BstXI CCANNNNNNTGG 1 cut(s) 674
BstYI RGATCY 1 cut(s) 663
BsuRI GGCC 5 cut(s) 80, 461, 911, 1151, 1271
BtgI CCRYGG 3 cut(s) 75, 597, 846
BtgZI GCGATG 1 cut(s) 584
BtsCI GGATG 3 cut(s) 454, 808, 981
BtsIMutI CAGTG 4 cut(s) 71, 135, 351, 1082
BveI ACCTGC 2 cut(s) 239, 961
Cac8I GCNNGC 3 cut(s) 440, 882, 909
CfoI GCGC 1 cut(s) 202
Cfr13I GGNCC 3 cut(s) 251, 989, 1224
Csp6I GTAC 3 cut(s) 40, 412, 815
CspCI CAANNNNNGTGG 2 cut(s) 1176, 1211
CviQI GTAC 3 cut(s) 40, 412, 815
DdeI CTNAG 4 cut(s) 138, 244, 524, 1146
DpnI GATC 5 cut(s) 376, 539, 581, 665, 839
DpnII GATC 5 cut(s) 374, 537, 579, 663, 837
DraIII CACNNNGTG 2 cut(s) 268, 1077
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 5 cut(s) 102, 220, 404, 801, 828
EarI CTCTTC 5 cut(s) 102, 220, 404, 801, 828
Ecl136II GAGCTC 1 cut(s) 607
Eco130I CCWWGG 3 cut(s) 553, 597, 659
Eco24I GRGCYC 2 cut(s) 114, 609
Eco47I GGWCC 3 cut(s) 251, 989, 1224
Eco47III AGCGCT 1 cut(s) 201
Eco53kI GAGCTC 1 cut(s) 607
Eco72I CACGTG 1 cut(s) 631
Eco88I CYCGRG 1 cut(s) 1136
EcoICRI GAGCTC 1 cut(s) 607
EcoNI CCTNNNNNAGG 1 cut(s) 165
EcoO109I RGGNCCY 1 cut(s) 251
EcoRII CCWGG 3 cut(s) 160, 540, 870
EcoT14I CCWWGG 3 cut(s) 553, 597, 659
EcoT38I GRGCYC 2 cut(s) 114, 609
ErhI CCWWGG 3 cut(s) 553, 597, 659
Esp3I CGTCTC 2 cut(s) 409, 803
FaqI GGGAC 1 cut(s) 237
FauNDI CATATG 1 cut(s) 784
Fnu4HI GCNGC 3 cut(s) 237, 858, 1152
FokI GGATG 3 cut(s) 461, 815, 988
FriOI GRGCYC 2 cut(s) 114, 609
Fsp4HI GCNGC 3 cut(s) 237, 858, 1152
FspBI CTAG 2 cut(s) 233, 1059
GlaI GCGC 1 cut(s) 201
GluI GCNGC 3 cut(s) 237, 858, 1152
GsuI CTGGAG 1 cut(s) 183
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 5 cut(s) 80, 461, 911, 1151, 1271
HapII CCGG 2 cut(s) 408, 830
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 1 cut(s) 433
HindII GTYRAC 1 cut(s) 433
HindIII AAGCTT 2 cut(s) 296, 1204
HinfI GANTC 3 cut(s) 736, 770, 1199
HpaI GTTAAC 1 cut(s) 433
HpaII CCGG 2 cut(s) 408, 830
HphI GGTGA 5 cut(s) 520, 614, 745, 751, 755
Hpy166II GTNNAC 3 cut(s) 69, 433, 690
Hpy188I TCNGA 3 cut(s) 525, 584, 985
Hpy188III TCNNGA 6 cut(s) 46, 254, 830, 1018, 1026, 1105
Hpy8I GTNNAC 3 cut(s) 69, 433, 690
Hpy99I CGWCG 1 cut(s) 260
HpyAV CCTTC 8 cut(s) 161, 704, 716, 724, 836, 980, 1186, 1226
HpyCH4III ACNGT 6 cut(s) 66, 76, 369, 392, 814, 1077
HpyCH4IV ACGT 3 cut(s) 339, 630, 1092
HpyCH4V TGCA 6 cut(s) 69, 271, 641, 782, 956, 1115
HpyF10VI GCNNNNNNNGC 9 cut(s) 208, 236, 245, 886, 895, 904, 913, 953, 1151
HpyF3I CTNAG 4 cut(s) 138, 244, 524, 1146
HpySE526I ACGT 3 cut(s) 339, 630, 1092
HspAI GCGC 1 cut(s) 200
Kpn2I TCCGGA 1 cut(s) 829
KpnI GGTACC 1 cut(s) 818
KspAI GTTAAC 1 cut(s) 433
Kzo9I GATC 5 cut(s) 374, 537, 579, 663, 837
LguI GCTCTTC 2 cut(s) 102, 220
LmnI GCTCC 2 cut(s) 4, 10
Lsp1109I GCAGC 2 cut(s) 248, 869
LweI GCATC 5 cut(s) 198, 210, 510, 628, 966
MaeI CTAG 2 cut(s) 233, 1059
MaeII ACGT 3 cut(s) 339, 630, 1092
MaeIII GTNAC 4 cut(s) 83, 278, 316, 743
MalI GATC 5 cut(s) 376, 539, 581, 665, 839
MboI GATC 5 cut(s) 374, 537, 579, 663, 837
MflI RGATCY 1 cut(s) 663
MhlI GDGCHC 4 cut(s) 71, 114, 232, 609
MluCI AATT 2 cut(s) 342, 861
MmeI TCCRAC 2 cut(s) 85, 1238
MnlI CCTC 6 cut(s) 124, 133, 393, 405, 1215, 1222
MroI TCCGGA 1 cut(s) 829
MroXI GAANNNNTTC 1 cut(s) 825
MseI TTAA 4 cut(s) 345, 432, 549, 864
MslI CAYNNNNRTG 6 cut(s) 74, 310, 312, 443, 506, 672
MspI CCGG 2 cut(s) 408, 830
MspR9I CCNGG 4 cut(s) 162, 409, 542, 872
Mva1269I GAATGC 2 cut(s) 18, 1117
MvaI CCWGG 3 cut(s) 162, 542, 872
MwoI GCNNNNNNNGC 9 cut(s) 208, 236, 245, 886, 895, 904, 913, 953, 1151
NciI CCSGG 1 cut(s) 409
NcoI CCATGG 1 cut(s) 597
NdeI CATATG 1 cut(s) 784
NdeII GATC 5 cut(s) 374, 537, 579, 663, 837
NlaIV GGNNCC 4 cut(s) 12, 253, 665, 816
NmuCI GTSAC 3 cut(s) 83, 316, 743
NspI RCATGY 2 cut(s) 324, 442
NspV TTCGAA 1 cut(s) 1053
OliI CACNNNNGTG 1 cut(s) 74
PaeI GCATGC 1 cut(s) 442
PciI ACATGT 1 cut(s) 320
PciSI GCTCTTC 2 cut(s) 102, 220
PctI GAATGC 2 cut(s) 18, 1117
PdmI GAANNNNTTC 1 cut(s) 825
PfeI GAWTC 3 cut(s) 736, 770, 1199
PflMI CCANNNNNTGG 1 cut(s) 1008
PkrI GCNGC 3 cut(s) 238, 859, 1153
PmaCI CACGTG 1 cut(s) 631
PmlI CACGTG 1 cut(s) 631
Ppu21I YACGTR 1 cut(s) 631
PpuMI RGGWCCY 1 cut(s) 251
PscI ACATGT 1 cut(s) 320
Psp124BI GAGCTC 1 cut(s) 609
Psp5II RGGWCCY 1 cut(s) 251
Psp6I CCWGG 3 cut(s) 160, 540, 870
PspCI CACGTG 1 cut(s) 631
PspGI CCWGG 3 cut(s) 160, 540, 870
PspN4I GGNNCC 4 cut(s) 12, 253, 665, 816
PspPI GGNCC 3 cut(s) 251, 989, 1224
PspPPI RGGWCCY 1 cut(s) 251
PsuI RGATCY 1 cut(s) 663
RsaI GTAC 3 cut(s) 41, 413, 816
RsaNI GTAC 3 cut(s) 40, 412, 815
RseI CAYNNNNRTG 6 cut(s) 74, 310, 312, 443, 506, 672
SacI GAGCTC 1 cut(s) 609
SapI GCTCTTC 2 cut(s) 102, 220
SaqAI TTAA 4 cut(s) 345, 432, 549, 864
SatI GCNGC 3 cut(s) 237, 858, 1152
Sau3AI GATC 5 cut(s) 374, 537, 579, 663, 837
Sau96I GGNCC 3 cut(s) 251, 989, 1224
ScaI AGTACT 1 cut(s) 41
ScrFI CCNGG 4 cut(s) 162, 409, 542, 872
SduI GDGCHC 4 cut(s) 71, 114, 232, 609
SfaNI GCATC 5 cut(s) 198, 210, 510, 628, 966
SfcI CTRYAG 1 cut(s) 652
SfuI TTCGAA 1 cut(s) 1053
SinI GGWCC 3 cut(s) 251, 989, 1224
SmiMI CAYNNNNRTG 6 cut(s) 74, 310, 312, 443, 506, 672
SmlI CTYRAG 1 cut(s) 1103
SmoI CTYRAG 1 cut(s) 1103
SphI GCATGC 1 cut(s) 442
Sse9I AATT 2 cut(s) 342, 861
SsiI CCGC 2 cut(s) 436, 1152
SspMI CTAG 2 cut(s) 233, 1059
SstI GAGCTC 1 cut(s) 609
StyD4I CCNGG 4 cut(s) 160, 407, 540, 870
StyI CCWWGG 3 cut(s) 553, 597, 659
TaaI ACNGT 6 cut(s) 66, 76, 369, 392, 814, 1077
TaiI ACGT 3 cut(s) 342, 633, 1095
TaqI TCGA 5 cut(s) 192, 293, 620, 1053, 1239
TaqII GACCGA 2 cut(s) 1006, 1241
TasI AATT 2 cut(s) 342, 861
TatI WGTACW 1 cut(s) 39
TauI GCSGC 1 cut(s) 1154
TfiI GAWTC 3 cut(s) 736, 770, 1199
Tru1I TTAA 4 cut(s) 345, 432, 549, 864
Tru9I TTAA 4 cut(s) 345, 432, 549, 864
TscAI CASTG 4 cut(s) 71, 142, 358, 1082
TseFI GTSAC 3 cut(s) 83, 316, 743
TseI GCWGC 2 cut(s) 236, 857
Tsp45I GTSAC 3 cut(s) 83, 316, 743
TspDTI ATGAA 5 cut(s) 324, 528, 686, 819, 1162
TspGWI ACGGA 1 cut(s) 1100
TspRI CASTG 4 cut(s) 71, 142, 358, 1082
Van91I CCANNNNNTGG 1 cut(s) 1008
VneI GTGCAC 1 cut(s) 67
VpaK11BI GGWCC 3 cut(s) 251, 989, 1224
XagI CCTNNNNNAGG 1 cut(s) 165
XceI RCATGY 2 cut(s) 324, 442
XcmI CCANNNNNNNNNTGG 1 cut(s) 796
XmnI GAANNNNTTC 1 cut(s) 825
XspI CTAG 2 cut(s) 233, 1059
ZrmI AGTACT 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.