pycom01g01960

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000128
Physical Location & Seq
Forward (+)
1710445 .. 1712706
2262 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g01960.2

Sequence Viewer

Length: 1806 bp
ATGACCATTAGTGAACTCAAATCAAGCACGATATTCCACGTGATTGATGCAGGAATTTCCTACAACTTGCTCTTAGGAAGGCCTTGGATTCACGAGAATGGAGTAGTGCCATACACCCTCTACCAATGCTTAAAATTCTATCGAGAAGGAGTGAAGGTGAACCAAGATGATACCAAGCCATTCATCGAAGTCGAATCACACTTCACAGACGATAAGTTCTACATGGAAGAAGACATGGTGCCCGAAGCTCTTCCAAAAGAGATCAAATCCATAGGAGAAGTTGTGCCATCTTCAAGCAAAAACAATGATAAGCCTGCTAAATCTACAATAACCAAAAGGAGAGGCAAAATGACCAAAACGTTAAGAAGAAAGAATGGTCAACCCCCGTTCGAAATTGGAGCAAGCAAAGCCAACACACAATGGCACAAGGATGATGTAAAGTTGGTCAAGGCGAATACAGTTTTGCCTTTGACACAGCTAGGTGACGCTAAGGTTGCAAGACCACCACAAGGCTTCATAAAAGCTCTGCCAAAGGGGGTGGAACCAAACTTTCTTCCAACCAAGAGGACCAAAGAAGGTTTTGATCCAAATGCCTACAAACTTATGTTGAAAGCTGGGTACGACTTTGCTTTATATTCGAATCCAGGAAAAAAGGTTTCAAACACTATCAACGACAATGAGCATGACCTCACTGAGACTCAAAAGAAGTTGAAAGAGCATGGTTACGGAGTTGACAACAACAAAGCTGGACTTGGCTTCACACCAAATGCACCCGTGAAGATTTCAAGCAAAACGATAAATGCTAGCCCTAAACCCGCTTCTCAGAAATCAGTCTTCAATAGGATGAATCGTTCAAGACCCATAATTTTGGCACTTAATTGCATTGGTGATCAAGACCGAACCTCCGTTTTCAAGAGGCTTAACATGCCAACATCCCAAAGCTTTGTTTTCGAAAGGTTATCAAAACCTAAGAAACAAAGCAACACAGCTAGCTCTCCTCTGCAACGGTTAACTTTGGAAAGACTTGAAGACAACAAGAAGCCTTCTAGAAAGAAGAAGACAATGCCAAAGGAAGAAAATCCTTCAAGGATGAGGCGCCAAGCAATCTTGGAGGTTGACACAAATAGACCACTGAAAGTAAAAAGGTGTACCATCATCCATACTGGCCAATCTTCACGCCAACAAGCCCAAGAGGATGACACTGAAGGGGAGAAGACGAAATCCCTAAGGAAGACGTCACTACTGTACCACCATAGCTCGAAGAAGGGGGGGCAAGCCACGGTTAATGATCTCAAGGAGCTCAACTTAGGAACAAAAGAGGAGCCCAAAACTATCTTCACAAGTGCATTGCTAAGTAAAGACGTCTTTGCTTGGACCTACAAGGAAATGCCAGGCCTTGACCCTATCATCGTTATGCATCGTCTTGCAGTCAGGCCTAGAATGCGACCGATAAAGCAAACATACATTCGCTATCGATCTGAGCCCATCCCATTAATGAAGGCCAAGATTAACAAGCTAATCGAAGCAGGCTTCATTCGAAAGGTGCAATACCCCACGTGGATCTCCAACATCGTCATTGTCCTTAAGGAATCTGGACAAATACATGACGACCTTCCCCTGCCAATCATCGAAATCTTGGTGGACGCACCCACTGGCCACGAGCATAGCTTGGTGCGAGAATTGTACGCACACAAATTAAACCCTCTTTTTGTCAAATTGTATGTTAATCACTTGGATTTGACTCAAAAACGGGGCGTTTGTTTGCCCTCACTAACTGGGACTGGACTGGACTGGACTAGCTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

602

Amino Acids

68.16

Weight (kDa)

9.76

Isoelectric Point (pI)

45.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1238, 1365
AccB1I GGYRCC 2 cut(s) 238, 1095
AciI CCGC 1 cut(s) 816
AclI AACGTT 1 cut(s) 359
AclWI GGATC 2 cut(s) 578, 1568
AcoI YGGCCR 2 cut(s) 1165, 1654
AcsI RAATTY 2 cut(s) 54, 134
AcuI CTGAAG 1 cut(s) 1224
AcvI CACGTG 2 cut(s) 40, 1557
AcyI GRCGYC 3 cut(s) 1096, 1235, 1362
AfaI GTAC 4 cut(s) 620, 1150, 1247, 1685
AfiI CCNNNNNNNGG 1 cut(s) 509
AflII CTTAAG 1 cut(s) 1583
AjnI CCWGG 2 cut(s) 643, 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 1319, 1351
AloI GAACNNNNNNTCC 2 cut(s) 835, 867
Alw21I GWGCWC 1 cut(s) 1302
Alw26I GTCTC 1 cut(s) 689
AlwI GGATC 2 cut(s) 578, 1568
AoxI GGCC 6 cut(s) 80, 1165, 1393, 1433, 1500, 1654
ApoI RAATTY 2 cut(s) 54, 134
AseI ATTAAT 1 cut(s) 1493
Asp700I GAANNNNTTC 1 cut(s) 249
AspLEI GCGC 1 cut(s) 1098
AspS9I GGNCC 2 cut(s) 567, 1374
AsuHPI GGTGA 3 cut(s) 169, 494, 899
AsuII TTCGAA 4 cut(s) 390, 638, 951, 1537
AsuNHI GCTAGC 2 cut(s) 803, 989
AvaII GGWCC 2 cut(s) 567, 1374
AxyI CCTNAGG 1 cut(s) 1226
BaeGI GKGCMC 1 cut(s) 243
BaeI ACNNNNGTAYC 2 cut(s) 1229, 1262
BalI TGGCCA 2 cut(s) 1167, 1656
BanI GGYRCC 2 cut(s) 238, 1095
BanII GRGCYC 3 cut(s) 1302, 1326, 1485
BauI CACGAG 2 cut(s) 92, 1658
BbrPI CACGTG 2 cut(s) 40, 1557
BbsI GAAGAC 6 cut(s) 237, 826, 1035, 1064, 1220, 1238
Bbv12I GWGCWC 1 cut(s) 1302
BccI CCATC 3 cut(s) 295, 1160, 1493
BciT130I CCWGG 2 cut(s) 645, 1392
BclI TGATCA 1 cut(s) 889
BcoDI GTCTC 1 cut(s) 689
BfaI CTAG 6 cut(s) 479, 804, 990, 1047, 1437, 1797
BfoI RGCGCY 1 cut(s) 1099
BfrI CTTAAG 1 cut(s) 1583
Bme1390I CCNGG 2 cut(s) 645, 1392
Bme18I GGWCC 2 cut(s) 567, 1374
BmgT120I GGNCC 2 cut(s) 567, 1374
BmiI GGNNCC 4 cut(s) 240, 543, 1097, 1323
BmrFI CCNGG 2 cut(s) 645, 1392
BmrI ACTGGG 1 cut(s) 1785
BmsI GCATC 2 cut(s) 37, 1426
BmtI GCTAGC 2 cut(s) 807, 993
BmuI ACTGGG 1 cut(s) 1785
BpiI GAAGAC 6 cut(s) 237, 826, 1035, 1064, 1220, 1238
Bpu10I CCTNAGC 1 cut(s) 489
Bpu14I TTCGAA 4 cut(s) 390, 638, 951, 1537
BpuEI CTTGAG 1 cut(s) 1277
Bsa29I ATCGAT 1 cut(s) 1474
BsaAI YACGTR 2 cut(s) 40, 1557
BsaHI GRCGYC 3 cut(s) 1096, 1235, 1362
BsaJI CCNNGG 2 cut(s) 83, 1278
BsaXI ACNNNNNCTCC 6 cut(s) 141, 171, 267, 297, 887, 917
Bsc4I CCNNNNNNNGG 1 cut(s) 509
Bse1I ACTGG 6 cut(s) 1168, 1657, 1780, 1786, 1791, 1796
Bse21I CCTNAGG 1 cut(s) 1226
Bse3DI GCAATG 1 cut(s) 1346
BseBI CCWGG 2 cut(s) 645, 1392
BseCI ATCGAT 1 cut(s) 1474
BseDI CCNNGG 2 cut(s) 83, 1278
BseGI GGATG 7 cut(s) 436, 849, 932, 1095, 1155, 1201, 1485
BseLI CCNNNNNNNGG 1 cut(s) 509
BseMI GCAATG 1 cut(s) 1346
BseMII CTCAG 3 cut(s) 684, 836, 1470
BseNI ACTGG 6 cut(s) 1168, 1657, 1780, 1786, 1791, 1796
BseRI GAGGAG 2 cut(s) 987, 1334
BseSI GKGCMC 1 cut(s) 243
BseYI CCCAGC 1 cut(s) 614
Bsh1285I CGRYCG 1 cut(s) 1448
BshFI GGCC 6 cut(s) 82, 1167, 1395, 1435, 1502, 1656
BshNI GGYRCC 2 cut(s) 238, 1095
BshVI ATCGAT 1 cut(s) 1474
BsiEI CGRYCG 1 cut(s) 1448
BsiHKAI GWGCWC 1 cut(s) 1302
BslFI GGGAC 1 cut(s) 1792
BslI CCNNNNNNNGG 1 cut(s) 509
BsmAI GTCTC 1 cut(s) 689
BsmFI GGGAC 1 cut(s) 1792
BsmI GAATGC 1 cut(s) 1446
BsnI GGCC 6 cut(s) 82, 1167, 1395, 1435, 1502, 1656
Bsp119I TTCGAA 4 cut(s) 390, 638, 951, 1537
Bsp1286I GDGCHC 4 cut(s) 243, 1302, 1326, 1485
Bsp143I GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
BspACI CCGC 1 cut(s) 816
BspANI GGCC 6 cut(s) 82, 1167, 1395, 1435, 1502, 1656
BspCNI CTCAG 3 cut(s) 685, 835, 1471
BspDI ATCGAT 1 cut(s) 1474
BspLI GGNNCC 4 cut(s) 240, 543, 1097, 1323
BspOI GCTAGC 2 cut(s) 807, 993
BspPI GGATC 2 cut(s) 578, 1568
BspQI GCTCTTC 1 cut(s) 255
BspT104I TTCGAA 4 cut(s) 390, 638, 951, 1537
BspT107I GGYRCC 2 cut(s) 238, 1095
BspTI CTTAAG 1 cut(s) 1583
BsrDI GCAATG 1 cut(s) 1346
BsrI ACTGG 6 cut(s) 1168, 1657, 1780, 1786, 1791, 1796
BssECI CCNNGG 2 cut(s) 83, 1278
BssMI GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
BssNI GRCGYC 3 cut(s) 1096, 1235, 1362
BssSI CACGAG 2 cut(s) 92, 1658
BssT1I CCWWGG 1 cut(s) 83
Bst2BI CACGAG 2 cut(s) 92, 1658
Bst2UI CCWGG 2 cut(s) 645, 1392
Bst4CI ACNGT 4 cut(s) 460, 1008, 1245, 1282
Bst6I CTCTTC 1 cut(s) 255
BstACI GRCGYC 3 cut(s) 1096, 1235, 1362
BstAFI CTTAAG 1 cut(s) 1583
BstBAI YACGTR 2 cut(s) 40, 1557
BstBI TTCGAA 4 cut(s) 390, 638, 951, 1537
BstC8I GCNNGC 6 cut(s) 315, 403, 805, 991, 1275, 1528
BstDEI CTNAG 9 cut(s) 73, 489, 693, 822, 969, 1226, 1306, 1352, 1479
BstDSI CCRYGG 1 cut(s) 1278
BstF5I GGATG 7 cut(s) 436, 849, 932, 1095, 1155, 1201, 1485
BstH2I RGCGCY 1 cut(s) 1099
BstHHI GCGC 1 cut(s) 1098
BstKTI GATC 6 cut(s) 264, 586, 892, 1291, 1478, 1563
BstMAI GTCTC 1 cut(s) 689
BstMBI GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
BstMCI CGRYCG 1 cut(s) 1448
BstMWI GCNNNNNNNGC 4 cut(s) 407, 494, 925, 1441
BstNI CCWGG 2 cut(s) 645, 1392
BstNSI RCATGY 1 cut(s) 928
BstSCI CCNGG 2 cut(s) 643, 1390
BstSLI GKGCMC 1 cut(s) 243
BstV2I GAAGAC 6 cut(s) 237, 826, 1035, 1064, 1220, 1238
BstX2I RGATCY 1 cut(s) 1560
BstXI CCANNNNNNTGG 1 cut(s) 868
BstYI RGATCY 1 cut(s) 1560
Bsu15I ATCGAT 1 cut(s) 1474
Bsu36I CCTNAGG 1 cut(s) 1226
BsuRI GGCC 6 cut(s) 82, 1167, 1395, 1435, 1502, 1656
BsuTUI ATCGAT 1 cut(s) 1474
BtgI CCRYGG 1 cut(s) 1278
BtsCI GGATG 7 cut(s) 436, 849, 932, 1095, 1155, 1201, 1485
BtsIMutI CAGTG 4 cut(s) 690, 1130, 1200, 1650
Cac8I GCNNGC 6 cut(s) 315, 403, 805, 991, 1275, 1528
CfoI GCGC 1 cut(s) 1098
Cfr13I GGNCC 2 cut(s) 567, 1374
ClaI ATCGAT 1 cut(s) 1474
CseI GACGC 2 cut(s) 494, 1652
Csp6I GTAC 4 cut(s) 619, 1149, 1246, 1684
CspCI CAANNNNNGTGG 2 cut(s) 519, 554
CviAII CATG 6 cut(s) 223, 235, 683, 719, 925, 1604
CviQI GTAC 4 cut(s) 619, 1149, 1246, 1684
DdeI CTNAG 9 cut(s) 73, 489, 693, 822, 969, 1226, 1306, 1352, 1479
DinI GGCGCC 1 cut(s) 1097
DpnI GATC 6 cut(s) 263, 585, 891, 1290, 1477, 1562
DpnII GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
EaeI YGGCCR 2 cut(s) 1165, 1654
Eam1104I CTCTTC 1 cut(s) 255
EarI CTCTTC 1 cut(s) 255
Ecl136II GAGCTC 1 cut(s) 1300
Eco130I CCWWGG 1 cut(s) 83
Eco147I AGGCCT 3 cut(s) 82, 1395, 1435
Eco24I GRGCYC 3 cut(s) 1302, 1326, 1485
Eco47I GGWCC 2 cut(s) 567, 1374
Eco53kI GAGCTC 1 cut(s) 1300
Eco57I CTGAAG 1 cut(s) 1224
Eco72I CACGTG 2 cut(s) 40, 1557
Eco81I CCTNAGG 1 cut(s) 1226
EcoICRI GAGCTC 1 cut(s) 1300
EcoRII CCWGG 2 cut(s) 643, 1390
EcoT14I CCWWGG 1 cut(s) 83
EcoT22I ATGCAT 1 cut(s) 1419
EcoT38I GRGCYC 3 cut(s) 1302, 1326, 1485
EgeI GGCGCC 1 cut(s) 1097
EheI GGCGCC 1 cut(s) 1097
ErhI CCWWGG 1 cut(s) 83
FaeI CATG 6 cut(s) 226, 238, 686, 722, 928, 1607
FalI AAGNNNNNCTT 2 cut(s) 735, 767
FaqI GGGAC 1 cut(s) 1792
FatI CATG 6 cut(s) 222, 234, 682, 718, 924, 1603
FauI CCCGC 1 cut(s) 823
FbaI TGATCA 1 cut(s) 889
FokI GGATG 7 cut(s) 443, 856, 919, 1102, 1142, 1208, 1472
FriOI GRGCYC 3 cut(s) 1302, 1326, 1485
FspBI CTAG 6 cut(s) 479, 804, 990, 1047, 1437, 1797
GlaI GCGC 1 cut(s) 1097
GsaI CCCAGC 1 cut(s) 618
HaeII RGCGCY 1 cut(s) 1099
HaeIII GGCC 6 cut(s) 82, 1167, 1395, 1435, 1502, 1656
HgaI GACGC 2 cut(s) 494, 1652
HhaI GCGC 1 cut(s) 1098
Hin1I GRCGYC 3 cut(s) 1096, 1235, 1362
Hin1II CATG 6 cut(s) 226, 238, 686, 722, 928, 1607
Hin6I GCGC 1 cut(s) 1096
HinP1I GCGC 1 cut(s) 1096
HincII GTYRAC 4 cut(s) 380, 733, 1011, 1117
HindII GTYRAC 4 cut(s) 380, 733, 1011, 1117
HindIII AAGCTT 1 cut(s) 940
HinfI GANTC 7 cut(s) 88, 194, 640, 697, 847, 1589, 1741
HpaI GTTAAC 1 cut(s) 1011
HphI GGTGA 3 cut(s) 169, 494, 899
Hpy166II GTNNAC 8 cut(s) 14, 160, 380, 733, 1011, 1117, 1149, 1642
Hpy188I TCNGA 2 cut(s) 825, 1480
Hpy188III TCNNGA 7 cut(s) 92, 143, 855, 893, 913, 1047, 1593
Hpy8I GTNNAC 8 cut(s) 14, 160, 380, 733, 1011, 1117, 1149, 1642
HpyCH4III ACNGT 4 cut(s) 460, 1008, 1245, 1282
HpyCH4IV ACGT 5 cut(s) 39, 359, 1235, 1362, 1556
HpyCH4V TGCA 9 cut(s) 50, 497, 770, 882, 1003, 1346, 1417, 1427, 1546
HpyF10VI GCNNNNNNNGC 4 cut(s) 407, 494, 925, 1441
HpyF3I CTNAG 9 cut(s) 73, 489, 693, 822, 969, 1226, 1306, 1352, 1479
HpySE526I ACGT 5 cut(s) 39, 359, 1235, 1362, 1556
Hsp92I GRCGYC 3 cut(s) 1096, 1235, 1362
Hsp92II CATG 6 cut(s) 226, 238, 686, 722, 928, 1607
HspAI GCGC 1 cut(s) 1096
KasI GGCGCC 1 cut(s) 1095
Ksp22I TGATCA 1 cut(s) 889
KspAI GTTAAC 1 cut(s) 1011
Kzo9I GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 3 cut(s) 398, 1297, 1321
LweI GCATC 2 cut(s) 37, 1426
MaeI CTAG 6 cut(s) 479, 804, 990, 1047, 1437, 1797
MaeII ACGT 5 cut(s) 39, 359, 1235, 1362, 1556
MaeIII GTNAC 3 cut(s) 482, 722, 1236
MalI GATC 6 cut(s) 263, 585, 891, 1290, 1477, 1562
MboI GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
MflI RGATCY 1 cut(s) 1560
MhlI GDGCHC 4 cut(s) 243, 1302, 1326, 1485
MlsI TGGCCA 2 cut(s) 1167, 1656
MluCI AATT 8 cut(s) 54, 134, 393, 864, 877, 1679, 1694, 1715
MluNI TGGCCA 2 cut(s) 1167, 1656
Mly113I GGCGCC 1 cut(s) 1096
MlyI GAGTC 2 cut(s) 691, 1735
MmeI TCCRAC 2 cut(s) 581, 1590
Mox20I TGGCCA 2 cut(s) 1167, 1656
Mph1103I ATGCAT 1 cut(s) 1419
MroXI GAANNNNTTC 1 cut(s) 249
MscI TGGCCA 2 cut(s) 1167, 1656
MslI CAYNNNNRTG 3 cut(s) 96, 429, 1412
Msp20I TGGCCA 2 cut(s) 1167, 1656
MspCI CTTAAG 1 cut(s) 1583
MspR9I CCNGG 2 cut(s) 645, 1392
Mva1269I GAATGC 1 cut(s) 1446
MvaI CCWGG 2 cut(s) 645, 1392
MwoI GCNNNNNNNGC 4 cut(s) 407, 494, 925, 1441
NarI GGCGCC 1 cut(s) 1096
NdeII GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
NheI GCTAGC 2 cut(s) 803, 989
NlaIII CATG 6 cut(s) 226, 238, 686, 722, 928, 1607
NlaIV GGNNCC 4 cut(s) 240, 543, 1097, 1323
NmuCI GTSAC 2 cut(s) 482, 1236
NsiI ATGCAT 1 cut(s) 1419
NspI RCATGY 1 cut(s) 928
NspV TTCGAA 4 cut(s) 390, 638, 951, 1537
PceI AGGCCT 3 cut(s) 82, 1395, 1435
PciSI GCTCTTC 1 cut(s) 255
PctI GAATGC 1 cut(s) 1446
PdmI GAANNNNTTC 1 cut(s) 249
PfeI GAWTC 5 cut(s) 88, 194, 640, 847, 1589
PfoI TCCNGGA 1 cut(s) 643
PleI GAGTC 2 cut(s) 691, 1735
PluTI GGCGCC 1 cut(s) 1099
PmaCI CACGTG 2 cut(s) 40, 1557
PmlI CACGTG 2 cut(s) 40, 1557
PpsI GAGTC 2 cut(s) 691, 1735
Ppu21I YACGTR 2 cut(s) 40, 1557
PshBI ATTAAT 1 cut(s) 1493
Psp124BI GAGCTC 1 cut(s) 1302
Psp1406I AACGTT 1 cut(s) 359
Psp6I CCWGG 2 cut(s) 643, 1390
PspCI CACGTG 2 cut(s) 40, 1557
PspFI CCCAGC 1 cut(s) 614
PspGI CCWGG 2 cut(s) 643, 1390
PspN4I GGNNCC 4 cut(s) 240, 543, 1097, 1323
PspPI GGNCC 2 cut(s) 567, 1374
PsuI RGATCY 1 cut(s) 1560
RsaI GTAC 4 cut(s) 620, 1150, 1247, 1685
RsaNI GTAC 4 cut(s) 619, 1149, 1246, 1684
RseI CAYNNNNRTG 3 cut(s) 96, 429, 1412
SacI GAGCTC 1 cut(s) 1302
SapI GCTCTTC 1 cut(s) 255
Sau3AI GATC 6 cut(s) 261, 583, 889, 1288, 1475, 1560
Sau96I GGNCC 2 cut(s) 567, 1374
SchI GAGTC 2 cut(s) 691, 1735
ScrFI CCNGG 2 cut(s) 645, 1392
SduI GDGCHC 4 cut(s) 243, 1302, 1326, 1485
SfaNI GCATC 2 cut(s) 37, 1426
SfoI GGCGCC 1 cut(s) 1097
SfuI TTCGAA 4 cut(s) 390, 638, 951, 1537
SinI GGWCC 2 cut(s) 567, 1374
SmiMI CAYNNNNRTG 3 cut(s) 96, 429, 1412
SmlI CTYRAG 2 cut(s) 1292, 1583
SmoI CTYRAG 2 cut(s) 1292, 1583
Sse9I AATT 8 cut(s) 54, 134, 393, 864, 877, 1679, 1694, 1715
SseBI AGGCCT 3 cut(s) 82, 1395, 1435
SsiI CCGC 1 cut(s) 816
SspDI GGCGCC 1 cut(s) 1095
SspMI CTAG 6 cut(s) 479, 804, 990, 1047, 1437, 1797
SstI GAGCTC 1 cut(s) 1302
StuI AGGCCT 3 cut(s) 82, 1395, 1435
StyD4I CCNGG 2 cut(s) 643, 1390
StyI CCWWGG 1 cut(s) 83
TaaI ACNGT 4 cut(s) 460, 1008, 1245, 1282
TaiI ACGT 5 cut(s) 42, 362, 1238, 1365, 1559
TaqII GACCGA 2 cut(s) 912, 1462
TasI AATT 8 cut(s) 54, 134, 393, 864, 877, 1679, 1694, 1715
TfiI GAWTC 5 cut(s) 88, 194, 640, 847, 1589
TscAI CASTG 4 cut(s) 697, 1137, 1207, 1657
TseFI GTSAC 2 cut(s) 482, 1236
Tsp45I GTSAC 2 cut(s) 482, 1236
TspDTI ATGAA 5 cut(s) 172, 505, 860, 1511, 1522
TspGWI ACGGA 2 cut(s) 741, 895
TspRI CASTG 4 cut(s) 697, 1137, 1207, 1657
Vha464I CTTAAG 1 cut(s) 1583
VpaK11BI GGWCC 2 cut(s) 567, 1374
VspI ATTAAT 1 cut(s) 1493
XapI RAATTY 2 cut(s) 54, 134
XbaI TCTAGA 1 cut(s) 1046
XceI RCATGY 1 cut(s) 928
XmnI GAANNNNTTC 1 cut(s) 249
XspI CTAG 6 cut(s) 479, 804, 990, 1047, 1437, 1797
ZraI GACGTC 2 cut(s) 1236, 1363
Zsp2I ATGCAT 1 cut(s) 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.