pycom07g27790

Helicase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000128
Physical Location & Seq
Forward (+)
27361117 .. 27362382
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g27790.1

Sequence Viewer

Length: 1266 bp
ATGGGATCTCTCTCTATCCAGCAGCTACAGGAGATGATCGCAAGCACTGTCAAGACACAGTACGAAGGAAGCTCGCATGACTCCGTGCTGTACTCAAAGCCTTACTCCAAGAAGATTGATGCTTTGAAGATGCCAAGGGGTTATCAGCCCCCAAAATTCATGCAGTTCGATGGAAAAGGCAACTCGAAGCAACATGTCGCCCATTTCATTGAAACTTGCAACAATGCTGGGACAGAGGGAGACTACCTCGTCAAACAGTTCGTGCGTTCGCTGAAAAGTAACGCTTTTGACTGGTACACTGACCTCGAACCTGAGTCTATCAACAGTTGGGACCAGCTAGAAAGGGAATTCCTCAACCATTTCTACAGCACTCGTCGTACTGTAAGCATGTTAGAGCTGACCAGTACGAAACAGTGGAGAGATGAACCTGTCGTCGACTACATAAATAGATGGCGCTCATTAAGTCTGGATTGCAAAGATCGGCTTTCTGAAACCTCTGCCATTGAGATGTGCGTTCAAGGCATGCAGTGGGGGTTACATTACATCCTCCAATGCATAAAACCAAGAACATTCGAAGAGTTAGCAACTCGTTCCCACGACATGGAGCTGAGTATCGCTAATCACGGGAAAAATGAGCCGATTACTAACTTCAAAAAGGATAAATTATTCGCCCCAAATGTAGACAAGACCGGGAAGAAGCCCGCTAAGGAAGCTTTCACCGTCAACACTACCCCCATCAAGACCTCCTCAGCGCCCATCAAGATCTCCTCCAAGAAGAAAGCGAAGGAGATAAAGACAAGTGAGCCTTCTCGCACCCAAGACAGATACAAGAGCACCTTGAGAGAGTTGGAACAGAAAACGTACCCTTTTCCTGACTCTGACATGGCTGCCATGTTAGATGACTTGCTGGAAAAAAAGGTGATTGAGCTACCCGAATGCAATCGTCCTAAAGAAATGAATCGCACAAACAATCCTAGGTACTGCAAGTACCATCGTATTGTGAGCCATCCTGTTAGCAAGTGCTTCGTTCTCAAAGAACTCATCATGAAGCTAGCACAACAAGGGCAAATTGAGCTCGACCTTGAGGGCACGGCCGCAACGCATACCACTACAATTCATTTGGATCGTTTAATCCTGTGCCTCTCCAAACGGCACCTGACCGTTCCCGTGAATGCTCAAGTTGCACGGCACCTCCTACACAACCATCACTGGAGAGAAGCGACCAAGATGCACATGCTGATGATGAAGAAGGATGGATATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helitron_like_N PIF1

Protein Analysis

422

Amino Acids

48.83

Weight (kDa)

9.12

Isoelectric Point (pI)

39.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 87 - 176 8.2e-14 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 248
AccB1I GGYRCC 2 cut(s) 1152, 1188
AccB7I CCANNNNNTGG 1 cut(s) 601
AccI GTMKAC 2 cut(s) 435, 681
AciI CCGC 2 cut(s) 702, 1095
AclWI GGATC 2 cut(s) 13, 1131
AcoI YGGCCR 1 cut(s) 1092
AcsI RAATTY 2 cut(s) 155, 347
AfaI GTAC 8 cut(s) 62, 92, 296, 379, 406, 863, 980, 989
AfiI CCNNNNNNNGG 1 cut(s) 601
AflIII ACRYGT 1 cut(s) 193
AgsI TTSAA 4 cut(s) 127, 212, 518, 652
AluBI AGCT 9 cut(s) 25, 72, 337, 397, 607, 713, 928, 1051, 1075
AluI AGCT 9 cut(s) 25, 72, 337, 397, 607, 713, 928, 1051, 1075
Alw21I GWGCWC 2 cut(s) 836, 1077
Alw26I GTCTC 1 cut(s) 234
AlwI GGATC 2 cut(s) 13, 1131
AoxI GGCC 1 cut(s) 1092
ApeKI GCWGC 2 cut(s) 22, 887
ApoI RAATTY 2 cut(s) 155, 347
AspA2I CCTAGG 1 cut(s) 974
AspLEI GCGC 2 cut(s) 456, 754
AspS9I GGNCC 1 cut(s) 331
AsuC2I CCSGG 1 cut(s) 691
AsuHPI GGTGA 2 cut(s) 709, 931
AsuII TTCGAA 1 cut(s) 573
AsuNHI GCTAGC 1 cut(s) 1051
AvaII GGWCC 1 cut(s) 331
AvrII CCTAGG 1 cut(s) 974
BaeGI GKGCMC 1 cut(s) 1091
BanI GGYRCC 2 cut(s) 1152, 1188
BanII GRGCYC 1 cut(s) 1077
Bbv12I GWGCWC 2 cut(s) 836, 1077
BbvCI CCTCAGC 1 cut(s) 748
BbvI GCAGC 2 cut(s) 34, 874
BccI CCATC 8 cut(s) 164, 444, 743, 764, 999, 1014, 1212, 1247
BceAI ACGGC 3 cut(s) 1107, 1166, 1202
BcgI CGANNNNNNTGC 4 cut(s) 1006, 1040, 1210, 1244
BcnI CCSGG 1 cut(s) 691
BcoDI GTCTC 1 cut(s) 234
BfaI CTAG 3 cut(s) 338, 975, 1052
BfmI CTRYAG 2 cut(s) 26, 364
BfoI RGCGCY 2 cut(s) 457, 755
BglII AGATCT 1 cut(s) 762
BisI GCNGC 3 cut(s) 23, 888, 1095
BlnI CCTAGG 1 cut(s) 974
BlsI GCNGC 3 cut(s) 24, 889, 1096
Bme1390I CCNGG 1 cut(s) 691
Bme18I GGWCC 1 cut(s) 331
BmgT120I GGNCC 1 cut(s) 331
BmiI GGNNCC 3 cut(s) 332, 1154, 1190
BmrFI CCNGG 1 cut(s) 691
BmsI GCATC 3 cut(s) 109, 120, 1218
BmtI GCTAGC 1 cut(s) 1055
BplI GAGNNNNNCTC 2 cut(s) 231, 263
BpmI CTGGAG 1 cut(s) 1231
Bpu10I CCTNAGC 2 cut(s) 705, 748
Bpu14I TTCGAA 1 cut(s) 573
BpuEI CTTGAG 3 cut(s) 859, 1103, 1161
BpuMI CCSGG 1 cut(s) 691
BsaJI CCNNGG 2 cut(s) 134, 974
BsaXI ACNNNNNCTCC 2 cut(s) 1176, 1206
Bsc4I CCNNNNNNNGG 1 cut(s) 601
Bse1I ACTGG 3 cut(s) 296, 402, 1214
BseDI CCNNGG 2 cut(s) 134, 974
BseGI GGATG 3 cut(s) 543, 1006, 1258
BseLI CCNNNNNNNGG 1 cut(s) 601
BseMII CTCAG 3 cut(s) 303, 599, 762
BseNI ACTGG 3 cut(s) 296, 402, 1214
BseRI GAGGAG 2 cut(s) 736, 757
BseSI GKGCMC 1 cut(s) 1091
BseX3I CGGCCG 1 cut(s) 1092
BseXI GCAGC 2 cut(s) 34, 874
BseYI CCCAGC 1 cut(s) 227
Bsh1285I CGRYCG 1 cut(s) 1095
BshFI GGCC 1 cut(s) 1094
BshNI GGYRCC 2 cut(s) 1152, 1188
BsiEI CGRYCG 1 cut(s) 1095
BsiHKAI GWGCWC 2 cut(s) 836, 1077
BsiSI CCGG 1 cut(s) 690
BslFI GGGAC 2 cut(s) 244, 344
BslI CCNNNNNNNGG 1 cut(s) 601
BsmAI GTCTC 1 cut(s) 234
BsmFI GGGAC 2 cut(s) 244, 344
BsmI GAATGC 2 cut(s) 941, 1177
BsnI GGCC 1 cut(s) 1094
Bsp119I TTCGAA 1 cut(s) 573
Bsp1286I GDGCHC 3 cut(s) 836, 1077, 1091
Bsp143I GATC 5 cut(s) 5, 36, 478, 762, 1123
BspACI CCGC 2 cut(s) 702, 1095
BspANI GGCC 1 cut(s) 1094
BspCNI CTCAG 3 cut(s) 304, 600, 761
BspHI TCATGA 1 cut(s) 1044
BspLI GGNNCC 3 cut(s) 332, 1154, 1190
BspOI GCTAGC 1 cut(s) 1055
BspPI GGATC 2 cut(s) 13, 1131
BspT104I TTCGAA 1 cut(s) 573
BspT107I GGYRCC 2 cut(s) 1152, 1188
BsrI ACTGG 3 cut(s) 296, 402, 1214
BssECI CCNNGG 2 cut(s) 134, 974
BssMI GATC 5 cut(s) 5, 36, 478, 762, 1123
BssT1I CCWWGG 2 cut(s) 134, 974
Bst4CI ACNGT 8 cut(s) 49, 60, 258, 326, 382, 414, 721, 1162
Bst6I CTCTTC 1 cut(s) 570
BstBI TTCGAA 1 cut(s) 573
BstC8I GCNNGC 5 cut(s) 43, 74, 524, 702, 1053
BstDEI CTNAG 4 cut(s) 312, 608, 705, 748
BstF5I GGATG 3 cut(s) 543, 1006, 1258
BstH2I RGCGCY 2 cut(s) 457, 755
BstHHI GCGC 2 cut(s) 456, 754
BstKTI GATC 5 cut(s) 8, 39, 481, 765, 1126
BstMAI GTCTC 1 cut(s) 234
BstMBI GATC 5 cut(s) 5, 36, 478, 762, 1123
BstMCI CGRYCG 1 cut(s) 1095
BstMWI GCNNNNNNNGC 4 cut(s) 519, 710, 1072, 1181
BstNSI RCATGY 4 cut(s) 197, 391, 526, 1237
BstSCI CCNGG 1 cut(s) 689
BstSFI CTRYAG 2 cut(s) 26, 364
BstSLI GKGCMC 1 cut(s) 1091
BstV1I GCAGC 2 cut(s) 34, 874
BstX2I RGATCY 2 cut(s) 5, 762
BstYI RGATCY 2 cut(s) 5, 762
BstZI CGGCCG 1 cut(s) 1092
BsuRI GGCC 1 cut(s) 1094
BtsCI GGATG 3 cut(s) 543, 1006, 1258
BtsI GCAGTG 1 cut(s) 533
BtsIMutI CAGTG 5 cut(s) 45, 297, 419, 533, 1207
Cac8I GCNNGC 5 cut(s) 43, 74, 524, 702, 1053
CciI TCATGA 1 cut(s) 1044
CfoI GCGC 2 cut(s) 456, 754
Cfr13I GGNCC 1 cut(s) 331
Csp6I GTAC 8 cut(s) 61, 91, 295, 378, 405, 862, 979, 988
CviQI GTAC 8 cut(s) 61, 91, 295, 378, 405, 862, 979, 988
DdeI CTNAG 4 cut(s) 312, 608, 705, 748
DpnI GATC 5 cut(s) 7, 38, 480, 764, 1125
DpnII GATC 5 cut(s) 5, 36, 478, 762, 1123
DrdI GACNNNNNNGTC 1 cut(s) 248
DseDI GACNNNNNNGTC 1 cut(s) 248
EaeI YGGCCR 1 cut(s) 1092
EagI CGGCCG 1 cut(s) 1092
Eam1104I CTCTTC 1 cut(s) 570
EarI CTCTTC 1 cut(s) 570
Ecl136II GAGCTC 1 cut(s) 1075
EclXI CGGCCG 1 cut(s) 1092
Eco130I CCWWGG 2 cut(s) 134, 974
Eco24I GRGCYC 1 cut(s) 1077
Eco47I GGWCC 1 cut(s) 331
Eco52I CGGCCG 1 cut(s) 1092
Eco53kI GAGCTC 1 cut(s) 1075
EcoICRI GAGCTC 1 cut(s) 1075
EcoRI GAATTC 1 cut(s) 347
EcoT14I CCWWGG 2 cut(s) 134, 974
EcoT22I ATGCAT 1 cut(s) 557
EcoT38I GRGCYC 1 cut(s) 1077
ErhI CCWWGG 2 cut(s) 134, 974
FalI AAGNNNNNCTT 8 cut(s) 268, 300, 468, 500, 790, 822, 821, 853
FaqI GGGAC 2 cut(s) 244, 344
FauI CCCGC 1 cut(s) 709
FblI GTMKAC 2 cut(s) 435, 681
Fnu4HI GCNGC 3 cut(s) 23, 888, 1095
FokI GGATG 2 cut(s) 530, 993
FriOI GRGCYC 1 cut(s) 1077
Fsp4HI GCNGC 3 cut(s) 23, 888, 1095
FspBI CTAG 3 cut(s) 338, 975, 1052
GlaI GCGC 2 cut(s) 455, 753
GluI GCNGC 3 cut(s) 23, 888, 1095
GsaI CCCAGC 1 cut(s) 231
GsuI CTGGAG 1 cut(s) 1231
HaeII RGCGCY 2 cut(s) 457, 755
HaeIII GGCC 1 cut(s) 1094
HapII CCGG 1 cut(s) 690
HhaI GCGC 2 cut(s) 456, 754
Hin6I GCGC 2 cut(s) 454, 752
HinP1I GCGC 2 cut(s) 454, 752
HincII GTYRAC 2 cut(s) 436, 724
HindII GTYRAC 2 cut(s) 436, 724
HindIII AAGCTT 1 cut(s) 711
HinfI GANTC 4 cut(s) 80, 314, 875, 958
HpaII CCGG 1 cut(s) 690
HphI GGTGA 2 cut(s) 709, 931
Hpy166II GTNNAC 4 cut(s) 297, 436, 682, 724
Hpy188I TCNGA 2 cut(s) 490, 880
Hpy188III TCNNGA 6 cut(s) 52, 467, 739, 760, 872, 1045
Hpy8I GTNNAC 4 cut(s) 297, 436, 682, 724
Hpy99I CGWCG 2 cut(s) 378, 437
HpyAV CCTTC 4 cut(s) 59, 778, 816, 1243
HpyCH4III ACNGT 8 cut(s) 49, 60, 258, 326, 382, 414, 721, 1162
HpyCH4IV ACGT 1 cut(s) 860
HpyCH4V TGCA 9 cut(s) 163, 219, 474, 526, 555, 939, 984, 1184, 1231
HpyF10VI GCNNNNNNNGC 4 cut(s) 519, 710, 1072, 1181
HpyF3I CTNAG 4 cut(s) 312, 608, 705, 748
HpySE526I ACGT 1 cut(s) 860
HspAI GCGC 2 cut(s) 454, 752
Kzo9I GATC 5 cut(s) 5, 36, 478, 762, 1123
LmnI GCTCC 1 cut(s) 604
Lsp1109I GCAGC 2 cut(s) 34, 874
LweI GCATC 3 cut(s) 109, 120, 1218
MaeI CTAG 3 cut(s) 338, 975, 1052
MaeII ACGT 1 cut(s) 860
MaeIII GTNAC 2 cut(s) 278, 534
MalI GATC 5 cut(s) 7, 38, 480, 764, 1125
MboI GATC 5 cut(s) 5, 36, 478, 762, 1123
MboII GAAGA 6 cut(s) 124, 139, 587, 706, 787, 1258
MflI RGATCY 2 cut(s) 5, 762
MhlI GDGCHC 3 cut(s) 836, 1077, 1091
MluCI AATT 5 cut(s) 155, 347, 662, 1068, 1113
MlyI GAGTC 3 cut(s) 74, 323, 869
MmeI TCCRAC 1 cut(s) 828
Mph1103I ATGCAT 1 cut(s) 557
MseI TTAA 2 cut(s) 461, 1130
MslI CAYNNNNRTG 2 cut(s) 506, 1238
MspI CCGG 1 cut(s) 690
MspR9I CCNGG 1 cut(s) 691
Mva1269I GAATGC 2 cut(s) 941, 1177
MwoI GCNNNNNNNGC 4 cut(s) 519, 710, 1072, 1181
NciI CCSGG 1 cut(s) 691
NdeII GATC 5 cut(s) 5, 36, 478, 762, 1123
NheI GCTAGC 1 cut(s) 1051
NlaIV GGNNCC 3 cut(s) 332, 1154, 1190
NsiI ATGCAT 1 cut(s) 557
NspI RCATGY 4 cut(s) 197, 391, 526, 1237
NspV TTCGAA 1 cut(s) 573
PaeI GCATGC 1 cut(s) 526
PagI TCATGA 1 cut(s) 1044
PciI ACATGT 1 cut(s) 193
PctI GAATGC 2 cut(s) 941, 1177
PfeI GAWTC 1 cut(s) 958
PflMI CCANNNNNTGG 1 cut(s) 601
PkrI GCNGC 3 cut(s) 24, 889, 1096
PleI GAGTC 3 cut(s) 74, 322, 869
PpsI GAGTC 3 cut(s) 74, 322, 869
PscI ACATGT 1 cut(s) 193
Psp124BI GAGCTC 1 cut(s) 1077
PspFI CCCAGC 1 cut(s) 227
PspN4I GGNNCC 3 cut(s) 332, 1154, 1190
PspPI GGNCC 1 cut(s) 331
PsuI RGATCY 2 cut(s) 5, 762
RsaI GTAC 8 cut(s) 62, 92, 296, 379, 406, 863, 980, 989
RsaNI GTAC 8 cut(s) 61, 91, 295, 378, 405, 862, 979, 988
RseI CAYNNNNRTG 2 cut(s) 506, 1238
SacI GAGCTC 1 cut(s) 1077
SalI GTCGAC 1 cut(s) 434
SaqAI TTAA 2 cut(s) 461, 1130
SatI GCNGC 3 cut(s) 23, 888, 1095
Sau3AI GATC 5 cut(s) 5, 36, 478, 762, 1123
Sau96I GGNCC 1 cut(s) 331
SchI GAGTC 3 cut(s) 74, 323, 869
ScrFI CCNGG 1 cut(s) 691
SduI GDGCHC 3 cut(s) 836, 1077, 1091
SfaNI GCATC 3 cut(s) 109, 120, 1218
SfcI CTRYAG 2 cut(s) 26, 364
SfuI TTCGAA 1 cut(s) 573
SinI GGWCC 1 cut(s) 331
SmiMI CAYNNNNRTG 2 cut(s) 506, 1238
SmlI CTYRAG 3 cut(s) 838, 1082, 1176
SmoI CTYRAG 3 cut(s) 838, 1082, 1176
SphI GCATGC 1 cut(s) 526
Sse9I AATT 5 cut(s) 155, 347, 662, 1068, 1113
SsiI CCGC 2 cut(s) 702, 1095
SspMI CTAG 3 cut(s) 338, 975, 1052
SstI GAGCTC 1 cut(s) 1077
StyD4I CCNGG 1 cut(s) 689
StyI CCWWGG 2 cut(s) 134, 974
TaaI ACNGT 8 cut(s) 49, 60, 258, 326, 382, 414, 721, 1162
TaiI ACGT 1 cut(s) 863
TaqI TCGA 6 cut(s) 168, 185, 306, 435, 573, 1077
TasI AATT 5 cut(s) 155, 347, 662, 1068, 1113
TatI WGTACW 1 cut(s) 90
TauI GCSGC 1 cut(s) 1097
TfiI GAWTC 1 cut(s) 958
Tru1I TTAA 2 cut(s) 461, 1130
Tru9I TTAA 2 cut(s) 461, 1130
TscAI CASTG 5 cut(s) 52, 304, 419, 533, 1214
TseI GCWGC 2 cut(s) 22, 887
TspDTI ATGAA 7 cut(s) 148, 196, 438, 971, 1061, 1106, 1259
TspGWI ACGGA 1 cut(s) 73
TspRI CASTG 5 cut(s) 52, 304, 419, 533, 1214
Van91I CCANNNNNTGG 1 cut(s) 601
VpaK11BI GGWCC 1 cut(s) 331
XapI RAATTY 2 cut(s) 155, 347
XceI RCATGY 4 cut(s) 197, 391, 526, 1237
XmaJI CCTAGG 1 cut(s) 974
XmiI GTMKAC 2 cut(s) 435, 681
XspI CTAG 3 cut(s) 338, 975, 1052
Zsp2I ATGCAT 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.