Rmu_sc0006139.1_g000009

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006139.1
OG0000128
Physical Location & Seq
Reverse (-)
32150 .. 48407
16258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006139.1_g000009.1.cds

Sequence Viewer

Length: 1734 bp
atggcaagaaattccactgaggaaccacataaggttttgtccgaaactaaagtgacagcttcaaagaacaaaatcggctcctctactccagttctccgttacgtgccaaggtctaggcgaaaagaaggggaatctccttttgtggaggcaaatgagcaagaacgtccgcgaaagctagatgagaaggacgtagaattgctaaaagaaacatcaaccataccgttgacgaagttgagcaacgtaacacccaccaagcagccgctaaagggatttgtcaaacctattcaaggcaacacagaacatggtacccttcctgagaaaaggacaaaggaaggatttgaccctaacgcttacaaactgctagcaaaggctggatatgacttcggatcgtcaagcaaggaaggtgatcaagtcatccctggtaagaaggtgcatgagcttaatgaatctcaaaggaggttgagagagcaaggatgcacaactgactctgctaaagcaggtcttggttttgtaccaagcaaaccgatcaaaatatcaggaagaagaaaagttgcaaaggcaagcactcaacacattagtgtcgaagtaatagaagaagagactcgggaatctaaatccacatctcgcgtttctgcactcgatcgtattcgtcctaattctcaagcagcggtgcctgaacaagttgatgagttgacacctcgagtttctgtatttgatcgtgttgacacgtcaacaagccgagtctcagttttcaaccgcatcacccaaacgaccactcgagcttccgtgttcaatagtctcattccgtcacgcatgaagcgacgctctatgttagaggtgagctcaagcgaacaactcaaagtgaaggagcacactatcgtactcactggccaagtcgaaactagtaatgttgatggcaatgatgaagatgagattgttcagtctgtctatcatatcacggtagcagaagcagaagcttttgaagaagatgaccatgatcattctgaggatgaagtagatgaagctcctccagaactcgaagacggggggcaagctactgtcgacgagcttaaagagctcaatttgggaactgaggaagatccaagacctgtcttcgtgataagggttgcagtcacgttttgtgacttttgtttagggctgggcacggtcctagaccggacccacatttacagggaccgggatcggaccggaagagttaagttcgggccgggcttgcacatgatggacacaaggaccggcctcaacccggacagtgacaaaattggccggtttctctgggctttcgaaggaagtcaggaagcatatccaaaccaagaaggaggagctccgtccaccacgccatcatccactctctctctttctttcccttcccattccaattctgattctgattccaagtcctccgactcctccatccgcatacagaatagcttgtcgggtcaagtacccgatcgacacccccgagaacatctggtcaacggtggtcaacgccggattccggacttttccggccgacttggccggccaagagcatgggtggaggacaggaaagagctgattagagttagagagtttaggtgggaagactttaggtgtagcaatgcacaaacggacaaagaaataggtcaacggtggtcaacgccggattccggacttttccggccgagttggccggccaagagcatgggtggaggacaggaaagagctgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

577

Amino Acids

64.42

Weight (kDa)

6.1

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000128)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28082 FvH4_2g15191 FvH4_2g31621 FvH4_3g07261 FvH4_3g22806 FvH4_3g26703 FvH4_3g26704 FvH4_3g31360 FvH4_4g01161 FvH4_4g22271 FvH4_4g25732 FvH4_5g00242 FvH4_5g28911 FvH4_5g32461 FvH4_6g13112 FvH4_6g53790 FvH4_6g53791 FvH4_7g03661 FvH4_7g04125 FvH4_7g04126
pyrus_communis pycom01g01950 pycom01g01960 pycom01g03260 pycom01g07760 pycom01g11430 pycom01g23980 pycom02g15030 pycom02g18630 pycom03g12320 pycom03g18810 pycom03g19250 pycom04g05010 pycom04g06520 pycom04g06680 pycom04g09630 pycom04g09640 pycom05g06850 pycom05g07540 pycom05g08940 pycom06g04300 pycom06g05750 pycom06g06960 pycom06g19690 pycom07g08750 pycom07g10700 pycom07g10910 pycom07g27480 pycom07g27790 pycom07g27800 pycom08g13620 pycom09g03540 pycom09g03550 pycom09g09870 pycom09g13480 pycom09g14360 pycom09g14890 pycom09g14930 pycom09g15760 pycom10g02190 pycom10g05270 pycom10g06810 pycom10g06830 pycom10g08060 pycom10g08520 pycom11g02350 pycom11g14170 pycom11g15050 pycom11g19270 pycom11g20160 pycom11g22420 pycom12g08620 pycom12g08630 pycom12g10440 pycom12g16590 pycom133g00190 pycom13g20730 pycom13g22230 pycom13g22670 pycom13g23230 pycom13g23250 pycom13g24880 pycom13g25300 pycom13g28040 pycom13g29010 pycom14g07570 pycom14g18650 pycom15g04500 pycom15g09310 pycom15g27210 pycom15g30810 pycom15g34920 pycom16g16040 pycom16g17260 pycom16g17940 pycom16g20990 pycom16g23470 pycom16g24160 pycom16g24720 pycom16g25910 pycom16g25920 pycom16g26370 pycom17g03310 pycom17g12670 pycom17g17530 pycom17g25090 pycom17g27300 pycom17g27310 pycom420g00140 pycom420g00160 pycom420g00320 pycom505g00220 pycom520g00740 pycom520g01010 pycom520g01020 pycom576g00060 pycom675g00040
rosa_laevigata RLG00000022630
rosa_multiflora Rmu_co7993280.1_g000001 Rmu_co8054704.1_g000001 Rmu_co8148394.1_g000001 Rmu_co8243015.1_g000001 Rmu_co8272095.1_g000001 Rmu_co8282359.1_g000001 Rmu_co8334783.1_g000001 Rmu_co8404405.1_g000001 Rmu_sc0000161.1_g000030 Rmu_sc0000418.1_g000026 Rmu_sc0000488.1_g000015 Rmu_sc0000706.1_g000041 Rmu_sc0000720.1_g000013 Rmu_sc0000776.1_g000022 Rmu_sc0000948.1_g000017 Rmu_sc0001167.1_g000045 Rmu_sc0001167.1_g000047 Rmu_sc0001211.1_g000054 Rmu_sc0001241.1_g000019 Rmu_sc0001307.1_g000021 Rmu_sc0001438.1_g000043 Rmu_sc0001468.1_g000032 Rmu_sc0001851.1_g000020 Rmu_sc0002026.1_g000023 Rmu_sc0002811.1_g000016 Rmu_sc0002958.1_g000002 Rmu_sc0002958.1_g000003 Rmu_sc0003745.1_g000010 Rmu_sc0004234.1_g000006 Rmu_sc0004234.1_g000008 Rmu_sc0005035.1_g000001 Rmu_sc0005320.1_g000010 Rmu_sc0005866.1_g000006 Rmu_sc0006139.1_g000009 Rmu_sc0006504.1_g000008 Rmu_sc0006695.1_g000049 Rmu_sc0006695.1_g000050 Rmu_sc0006981.1_g000001 Rmu_sc0007108.1_g000012 Rmu_sc0007355.1_g000001 Rmu_sc0007873.1_g000015 Rmu_sc0007961.1_g000003 Rmu_sc0008991.1_g000005 Rmu_sc0009528.1_g000009 Rmu_sc0013299.1_g000003 Rmu_sc0013532.1_g000015 Rmu_sc0015524.1_g000001 Rmu_sc0015793.1_g000001 Rmu_sc0015817.1_g000006 Rmu_sc0015930.1_g000003 Rmu_sc0015930.1_g000006 Rmu_sc0016952.1_g000002 Rmu_sc0016952.1_g000003 Rmu_sc0018715.1_g000003 Rmu_sc0018715.1_g000005 Rmu_sc0023934.1_g000003 Rmu_sc0023989.1_g000002 Rmu_sc0023989.1_g000003 Rmu_sc0028612.1_g000001 Rmu_sc0029049.1_g000001 Rmu_sc0029639.1_g000001 Rmu_sc0035263.1_g000001 Rmu_sc0037892.1_g000001 Rmu_ssc0000170.1_g000024 Rmu_ssc0000233.1_g000057 Rmu_ssc0000259.1_g000055 Rmu_ssc0000259.1_g000057
rosa_roxburghii Rroxscaffold_4G00287780 Rroxscaffold_4G00325290 Rroxscaffold_5G00333910 Rroxscaffold_7G00211350
rosa_rugosa Rorug01G0056300 Rorug04G0149000 Rorug07G0222000
rosa_samantha Rh1AG072900 Rh1CG072000
rosa_wichuraiana Rw0G003630 Rw0G005250 Rw0G020770 Rw0G023770 Rw1G005460 Rw1G005980 Rw1G007190 Rw1G011350 Rw1G022520 Rw1G028660 Rw2G018620 Rw2G019490 Rw4G006910 Rw4G013020 Rw4G023970 Rw5G044650 Rw6G006590 Rw6G012210 Rw6G023750 Rw7G027370 Rw7G027460 Rw7G035570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 488
Acc65I GGTACC 1 cut(s) 305
AccB1I GGYRCC 2 cut(s) 305, 670
AccI GTMKAC 1 cut(s) 1062
AccII CGCG 2 cut(s) 169, 627
AccIII TCCGGA 2 cut(s) 1519, 1670
AciI CCGC 5 cut(s) 167, 260, 668, 757, 1438
AclWI GGATC 3 cut(s) 394, 1094, 1209
AcoI YGGCCR 8 cut(s) 889, 1285, 1531, 1540, 1544, 1682, 1691, 1695
AcsI RAATTY 1 cut(s) 10
AfaI GTAC 4 cut(s) 307, 513, 882, 1467
AfiI CCNNNNNNNGG 5 cut(s) 266, 287, 1267, 1519, 1670
AflIII ACRYGT 1 cut(s) 726
AgsI TTSAA 5 cut(s) 63, 287, 754, 793, 983
AhlI ACTAGT 1 cut(s) 902
AjiI CACGTC 1 cut(s) 729
AjnI CCWGG 1 cut(s) 418
AleI CACNNNNGTG 1 cut(s) 576
Alw21I GWGCWC 4 cut(s) 845, 873, 1080, 1348
Alw26I GTCTC 3 cut(s) 593, 748, 803
AlwI GGATC 3 cut(s) 394, 1094, 1209
Ama87I CYCGRG 4 cut(s) 603, 699, 777, 1482
Aor13HI TCCGGA 2 cut(s) 1519, 1670
ApeKI GCWGC 2 cut(s) 256, 665
ApoI RAATTY 1 cut(s) 10
Asp718I GGTACC 1 cut(s) 305
AspS9I GGNCC 6 cut(s) 1168, 1179, 1195, 1206, 1226, 1254
AsuC2I CCSGG 3 cut(s) 1199, 1230, 1268
AsuHPI GGTGA 3 cut(s) 416, 754, 850
AsuII TTCGAA 1 cut(s) 1305
AsuNHI GCTAGC 1 cut(s) 361
AvaI CYCGRG 4 cut(s) 603, 699, 777, 1482
AvaII GGWCC 5 cut(s) 1168, 1179, 1195, 1206, 1254
BaeGI GKGCMC 1 cut(s) 1166
BalI TGGCCA 1 cut(s) 891
BanI GGYRCC 2 cut(s) 305, 670
BanII GRGCYC 3 cut(s) 845, 1080, 1348
BbsI GAAGAC 3 cut(s) 1047, 1105, 1611
Bbv12I GWGCWC 4 cut(s) 845, 873, 1080, 1348
BbvI GCAGC 2 cut(s) 268, 677
BccI CCATC 4 cut(s) 908, 1237, 1369, 1442
BciT130I CCWGG 1 cut(s) 420
BclI TGATCA 2 cut(s) 406, 997
BcnI CCSGG 3 cut(s) 1199, 1230, 1268
BcoDI GTCTC 3 cut(s) 593, 748, 803
BcuI ACTAGT 1 cut(s) 902
BfaI CTAG 5 cut(s) 114, 176, 362, 903, 1172
BfuAI ACCTGC 1 cut(s) 488
BglI GCCNNNNNGGC 2 cut(s) 1539, 1690
BisI GCNGC 3 cut(s) 257, 260, 666
BlsI GCNGC 3 cut(s) 258, 261, 667
Bme1390I CCNGG 4 cut(s) 420, 1199, 1230, 1268
Bme18I GGWCC 5 cut(s) 1168, 1179, 1195, 1206, 1254
BmeT110I CYCGRG 4 cut(s) 603, 699, 777, 1482
BmgBI CACGTC 1 cut(s) 729
BmgT120I GGNCC 6 cut(s) 1168, 1179, 1195, 1206, 1226, 1254
BmiI GGNNCC 6 cut(s) 24, 79, 307, 672, 1181, 1196
BmrFI CCNGG 4 cut(s) 420, 1199, 1230, 1268
BmsI GCATC 2 cut(s) 464, 768
BmtI GCTAGC 1 cut(s) 365
BpiI GAAGAC 3 cut(s) 1047, 1105, 1611
BplI GAGNNNNNCTC 2 cut(s) 827, 859
BpmI CTGGAG 2 cut(s) 72, 1014
Bpu14I TTCGAA 1 cut(s) 1305
BpuEI CTTGAG 2 cut(s) 645, 829
BpuMI CCSGG 3 cut(s) 1199, 1230, 1268
BsaAI YACGTR 1 cut(s) 103
BsaJI CCNNGG 2 cut(s) 107, 418
BsaWI WCCGGW 4 cut(s) 1176, 1208, 1519, 1670
Bsc4I CCNNNNNNNGG 5 cut(s) 266, 287, 1267, 1519, 1670
Bse118I RCCGGY 4 cut(s) 1256, 1287, 1542, 1693
Bse1I ACTGG 2 cut(s) 89, 892
Bse3DI GCAATG 2 cut(s) 925, 1627
BseAI TCCGGA 2 cut(s) 1519, 1670
BseBI CCWGG 1 cut(s) 420
BseDI CCNNGG 2 cut(s) 107, 418
BseGI GGATG 5 cut(s) 414, 479, 1015, 1364, 1434
BseLI CCNNNNNNNGG 5 cut(s) 266, 287, 1267, 1519, 1670
BseMI GCAATG 2 cut(s) 925, 1627
BseMII CTCAG 5 cut(s) 9, 306, 759, 996, 1083
BseNI ACTGG 2 cut(s) 89, 892
BseRI GAGGAG 4 cut(s) 70, 1017, 1356, 1420
BseSI GKGCMC 1 cut(s) 1166
BseX3I CGGCCG 2 cut(s) 1531, 1682
BseXI GCAGC 2 cut(s) 268, 677
BseYI CCCAGC 1 cut(s) 1159
BsgI GTGCAG 1 cut(s) 618
Bsh1236I CGCG 2 cut(s) 169, 627
Bsh1285I CGRYCG 4 cut(s) 643, 1474, 1534, 1685
BshNI GGYRCC 2 cut(s) 305, 670
BsiEI CGRYCG 4 cut(s) 643, 1474, 1534, 1685
BsiHKAI GWGCWC 4 cut(s) 845, 873, 1080, 1348
BsiHKCI CYCGRG 4 cut(s) 603, 699, 777, 1482
BslFI GGGAC 1 cut(s) 1208
BslI CCNNNNNNNGG 5 cut(s) 266, 287, 1267, 1519, 1670
BsmAI GTCTC 3 cut(s) 593, 748, 803
BsmFI GGGAC 1 cut(s) 1208
BsoBI CYCGRG 4 cut(s) 603, 699, 777, 1482
Bsp119I TTCGAA 1 cut(s) 1305
Bsp1286I GDGCHC 5 cut(s) 845, 873, 1080, 1166, 1348
Bsp13I TCCGGA 2 cut(s) 1519, 1670
Bsp143I GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
BspACI CCGC 5 cut(s) 167, 260, 668, 757, 1438
BspCNI CTCAG 5 cut(s) 10, 307, 758, 997, 1084
BspEI TCCGGA 2 cut(s) 1519, 1670
BspFNI CGCG 2 cut(s) 169, 627
BspLI GGNNCC 6 cut(s) 24, 79, 307, 672, 1181, 1196
BspMI ACCTGC 1 cut(s) 488
BspOI GCTAGC 1 cut(s) 365
BspPI GGATC 3 cut(s) 394, 1094, 1209
BspT104I TTCGAA 1 cut(s) 1305
BspT107I GGYRCC 2 cut(s) 305, 670
BsrDI GCAATG 2 cut(s) 925, 1627
BsrFI RCCGGY 4 cut(s) 1256, 1287, 1542, 1693
BsrI ACTGG 2 cut(s) 89, 892
BssAI RCCGGY 4 cut(s) 1256, 1287, 1542, 1693
BssECI CCNNGG 2 cut(s) 107, 418
BssMI GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
BssT1I CCWWGG 1 cut(s) 107
Bst2UI CCWGG 1 cut(s) 420
Bst4CI ACNGT 7 cut(s) 222, 961, 1060, 1168, 1274, 1502, 1653
Bst6I CTCTTC 2 cut(s) 591, 1207
BstBAI YACGTR 1 cut(s) 103
BstBI TTCGAA 1 cut(s) 1305
BstC8I GCNNGC 6 cut(s) 363, 562, 1053, 1235, 1544, 1695
BstDEI CTNAG 5 cut(s) 18, 315, 745, 1005, 1092
BstENI CCTNNNNNAGG 1 cut(s) 285
BstF5I GGATG 5 cut(s) 414, 479, 1015, 1364, 1434
BstFNI CGCG 2 cut(s) 169, 627
BstKTI GATC 9 cut(s) 389, 409, 528, 643, 718, 1000, 1102, 1204, 1474
BstMAI GTCTC 3 cut(s) 593, 748, 803
BstMBI GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
BstMCI CGRYCG 4 cut(s) 643, 1474, 1534, 1685
BstMWI GCNNNNNNNGC 4 cut(s) 1075, 1234, 1539, 1690
BstNI CCWGG 1 cut(s) 420
BstSCI CCNGG 4 cut(s) 418, 1197, 1228, 1266
BstSLI GKGCMC 1 cut(s) 1166
BstUI CGCG 2 cut(s) 169, 627
BstV1I GCAGC 2 cut(s) 268, 677
BstV2I GAAGAC 3 cut(s) 1047, 1105, 1611
BstX2I RGATCY 1 cut(s) 1099
BstXI CCANNNNNNTGG 2 cut(s) 1554, 1705
BstYI RGATCY 1 cut(s) 1099
BstZI CGGCCG 2 cut(s) 1531, 1682
BtrI CACGTC 1 cut(s) 729
BtsCI GGATG 5 cut(s) 414, 479, 1015, 1364, 1434
BtsIMutI CAGTG 3 cut(s) 15, 885, 1279
BveI ACCTGC 1 cut(s) 488
Cac8I GCNNGC 6 cut(s) 363, 562, 1053, 1235, 1544, 1695
Cfr10I RCCGGY 4 cut(s) 1256, 1287, 1542, 1693
Cfr13I GGNCC 6 cut(s) 1168, 1179, 1195, 1206, 1226, 1254
CpoI CGGWCCG 1 cut(s) 1206
CseI GACGC 1 cut(s) 831
Csp6I GTAC 4 cut(s) 306, 512, 881, 1466
CspI CGGWCCG 1 cut(s) 1206
CviAII CATG 7 cut(s) 302, 434, 814, 995, 1240, 1554, 1705
CviQI GTAC 4 cut(s) 306, 512, 881, 1466
DdeI CTNAG 5 cut(s) 18, 315, 745, 1005, 1092
DpnI GATC 9 cut(s) 388, 408, 527, 642, 717, 999, 1101, 1203, 1473
DpnII GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
EaeI YGGCCR 8 cut(s) 889, 1285, 1531, 1540, 1544, 1682, 1691, 1695
EagI CGGCCG 2 cut(s) 1531, 1682
Eam1104I CTCTTC 2 cut(s) 591, 1207
EarI CTCTTC 2 cut(s) 591, 1207
Ecl136II GAGCTC 3 cut(s) 843, 1078, 1346
EclXI CGGCCG 2 cut(s) 1531, 1682
Eco130I CCWWGG 1 cut(s) 107
Eco24I GRGCYC 3 cut(s) 845, 1080, 1348
Eco47I GGWCC 5 cut(s) 1168, 1179, 1195, 1206, 1254
Eco52I CGGCCG 2 cut(s) 1531, 1682
Eco53kI GAGCTC 3 cut(s) 843, 1078, 1346
Eco88I CYCGRG 4 cut(s) 603, 699, 777, 1482
EcoICRI GAGCTC 3 cut(s) 843, 1078, 1346
EcoNI CCTNNNNNAGG 1 cut(s) 285
EcoRII CCWGG 1 cut(s) 418
EcoT14I CCWWGG 1 cut(s) 107
EcoT38I GRGCYC 3 cut(s) 845, 1080, 1348
ErhI CCWWGG 1 cut(s) 107
FaeI CATG 7 cut(s) 305, 437, 817, 998, 1243, 1557, 1708
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FaqI GGGAC 1 cut(s) 1208
FatI CATG 7 cut(s) 301, 433, 813, 994, 1239, 1553, 1704
FbaI TGATCA 2 cut(s) 406, 997
FblI GTMKAC 1 cut(s) 1062
Fnu4HI GCNGC 3 cut(s) 257, 260, 666
FokI GGATG 5 cut(s) 401, 486, 1022, 1351, 1421
FriOI GRGCYC 3 cut(s) 845, 1080, 1348
FseI GGCCGGCC 2 cut(s) 1546, 1697
Fsp4HI GCNGC 3 cut(s) 257, 260, 666
FspBI CTAG 5 cut(s) 114, 176, 362, 903, 1172
GluI GCNGC 3 cut(s) 257, 260, 666
GsaI CCCAGC 1 cut(s) 1163
GsuI CTGGAG 2 cut(s) 72, 1014
HgaI GACGC 1 cut(s) 831
Hin1II CATG 7 cut(s) 305, 437, 817, 998, 1243, 1557, 1708
HincII GTYRAC 9 cut(s) 225, 693, 724, 732, 1063, 1498, 1508, 1649, 1659
HindII GTYRAC 9 cut(s) 225, 693, 724, 732, 1063, 1498, 1508, 1649, 1659
HindIII AAGCTT 1 cut(s) 975
HphI GGTGA 3 cut(s) 416, 754, 850
Hpy188I TCNGA 7 cut(s) 43, 386, 1006, 1206, 1405, 1411, 1426
Hpy188III TCNNGA 8 cut(s) 314, 537, 605, 1031, 1117, 1316, 1520, 1671
Hpy99I CGWCG 2 cut(s) 825, 1067
HpyCH4III ACNGT 7 cut(s) 222, 961, 1060, 1168, 1274, 1502, 1653
HpyCH4IV ACGT 6 cut(s) 102, 163, 189, 240, 728, 1136
HpyCH4V TGCA 7 cut(s) 433, 477, 554, 635, 1130, 1237, 1625
HpyF10VI GCNNNNNNNGC 4 cut(s) 1075, 1234, 1539, 1690
HpyF3I CTNAG 5 cut(s) 18, 315, 745, 1005, 1092
HpySE526I ACGT 6 cut(s) 102, 163, 189, 240, 728, 1136
Hsp92II CATG 7 cut(s) 305, 437, 817, 998, 1243, 1557, 1708
Kpn2I TCCGGA 2 cut(s) 1519, 1670
KpnI GGTACC 1 cut(s) 309
KroI GCCGGC 2 cut(s) 1542, 1693
KroNI GCCGGC 2 cut(s) 1544, 1695
Ksp22I TGATCA 2 cut(s) 406, 997
Kzo9I GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
LmnI GCTCC 5 cut(s) 83, 868, 1030, 1343, 1351
Lsp1109I GCAGC 2 cut(s) 268, 677
LweI GCATC 2 cut(s) 464, 768
MaeI CTAG 5 cut(s) 114, 176, 362, 903, 1172
MaeII ACGT 6 cut(s) 102, 163, 189, 240, 728, 1136
MaeIII GTNAC 7 cut(s) 52, 98, 241, 807, 1132, 1142, 1274
MalI GATC 9 cut(s) 388, 408, 527, 642, 717, 999, 1101, 1203, 1473
MboI GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
MflI RGATCY 1 cut(s) 1099
MhlI GDGCHC 5 cut(s) 845, 873, 1080, 1166, 1348
MlsI TGGCCA 1 cut(s) 891
MluCI AATT 6 cut(s) 10, 194, 655, 1081, 1281, 1399
MluNI TGGCCA 1 cut(s) 891
MlyI GAGTC 4 cut(s) 479, 595, 750, 1421
MmeI TCCRAC 1 cut(s) 1449
Mox20I TGGCCA 1 cut(s) 891
MroI TCCGGA 2 cut(s) 1519, 1670
MroNI GCCGGC 2 cut(s) 1542, 1693
MscI TGGCCA 1 cut(s) 891
MseI TTAA 3 cut(s) 441, 1071, 1218
MslI CAYNNNNRTG 1 cut(s) 576
Msp20I TGGCCA 1 cut(s) 891
MspA1I CMGCKG 1 cut(s) 668
MspR9I CCNGG 4 cut(s) 420, 1199, 1230, 1268
MvaI CCWGG 1 cut(s) 420
MvnI CGCG 2 cut(s) 169, 627
MwoI GCNNNNNNNGC 4 cut(s) 1075, 1234, 1539, 1690
NaeI GCCGGC 2 cut(s) 1544, 1695
NciI CCSGG 3 cut(s) 1199, 1230, 1268
NdeII GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
NgoMIV GCCGGC 2 cut(s) 1542, 1693
NheI GCTAGC 1 cut(s) 361
NlaIII CATG 7 cut(s) 305, 437, 817, 998, 1243, 1557, 1708
NlaIV GGNNCC 6 cut(s) 24, 79, 307, 672, 1181, 1196
NmeAIII GCCGAG 2 cut(s) 764, 1710
NmuCI GTSAC 5 cut(s) 52, 807, 1132, 1142, 1274
NspV TTCGAA 1 cut(s) 1305
OliI CACNNNNGTG 1 cut(s) 576
PaeR7I CTCGAG 2 cut(s) 699, 777
PcsI WCGNNNNNNNCGW 2 cut(s) 817, 1480
PdiI GCCGGC 2 cut(s) 1544, 1695
PfeI GAWTC 7 cut(s) 131, 446, 608, 1406, 1412, 1516, 1667
PkrI GCNGC 3 cut(s) 258, 261, 667
Ple19I CGATCG 2 cut(s) 643, 1474
PleI GAGTC 4 cut(s) 479, 595, 749, 1421
PpsI GAGTC 4 cut(s) 479, 595, 749, 1421
Ppu21I YACGTR 1 cut(s) 103
Psp124BI GAGCTC 3 cut(s) 845, 1080, 1348
Psp6I CCWGG 1 cut(s) 418
PspFI CCCAGC 1 cut(s) 1159
PspGI CCWGG 1 cut(s) 418
PspN4I GGNNCC 6 cut(s) 24, 79, 307, 672, 1181, 1196
PspPI GGNCC 6 cut(s) 1168, 1179, 1195, 1206, 1226, 1254
PspXI VCTCGAGB 2 cut(s) 699, 777
PsuI RGATCY 1 cut(s) 1099
PvuI CGATCG 2 cut(s) 643, 1474
RigI GGCCGGCC 2 cut(s) 1546, 1697
RsaI GTAC 4 cut(s) 307, 513, 882, 1467
RsaNI GTAC 4 cut(s) 306, 512, 881, 1466
RseI CAYNNNNRTG 1 cut(s) 576
Rsr2I CGGWCCG 1 cut(s) 1206
RsrII CGGWCCG 1 cut(s) 1206
SacI GAGCTC 3 cut(s) 845, 1080, 1348
SalI GTCGAC 1 cut(s) 1061
SaqAI TTAA 3 cut(s) 441, 1071, 1218
SatI GCNGC 3 cut(s) 257, 260, 666
Sau3AI GATC 9 cut(s) 386, 406, 525, 640, 715, 997, 1099, 1201, 1471
Sau96I GGNCC 6 cut(s) 1168, 1179, 1195, 1206, 1226, 1254
SchI GAGTC 4 cut(s) 479, 595, 750, 1421
ScrFI CCNGG 4 cut(s) 420, 1199, 1230, 1268
SduI GDGCHC 5 cut(s) 845, 873, 1080, 1166, 1348
SfaNI GCATC 2 cut(s) 464, 768
SfiI GGCCNNNNNGGCC 2 cut(s) 1539, 1690
Sfr274I CTCGAG 2 cut(s) 699, 777
SfuI TTCGAA 1 cut(s) 1305
SinI GGWCC 5 cut(s) 1168, 1179, 1195, 1206, 1254
SlaI CTCGAG 2 cut(s) 699, 777
SmiMI CAYNNNNRTG 1 cut(s) 576
SmlI CTYRAG 4 cut(s) 660, 699, 777, 844
SmoI CTYRAG 4 cut(s) 660, 699, 777, 844
SpeI ACTAGT 1 cut(s) 902
Sse9I AATT 6 cut(s) 10, 194, 655, 1081, 1281, 1399
SsiI CCGC 5 cut(s) 167, 260, 668, 757, 1438
SspMI CTAG 5 cut(s) 114, 176, 362, 903, 1172
SstI GAGCTC 3 cut(s) 845, 1080, 1348
StyD4I CCNGG 4 cut(s) 418, 1197, 1228, 1266
StyI CCWWGG 1 cut(s) 107
TaaI ACNGT 7 cut(s) 222, 961, 1060, 1168, 1274, 1502, 1653
TaiI ACGT 6 cut(s) 105, 166, 192, 243, 731, 1139
TaqI TCGA 9 cut(s) 582, 639, 700, 778, 897, 1038, 1062, 1305, 1474
TasI AATT 6 cut(s) 10, 194, 655, 1081, 1281, 1399
TauI GCSGC 1 cut(s) 262
TfiI GAWTC 7 cut(s) 131, 446, 608, 1406, 1412, 1516, 1667
Tru1I TTAA 3 cut(s) 441, 1071, 1218
Tru9I TTAA 3 cut(s) 441, 1071, 1218
TscAI CASTG 3 cut(s) 22, 892, 1279
TseFI GTSAC 5 cut(s) 52, 807, 1132, 1142, 1274
TseI GCWGC 2 cut(s) 256, 665
Tsp45I GTSAC 5 cut(s) 52, 807, 1132, 1142, 1274
TspDTI ATGAA 5 cut(s) 459, 830, 939, 1026, 1035
TspGWI ACGGA 5 cut(s) 86, 775, 795, 1338, 1646
TspRI CASTG 3 cut(s) 22, 892, 1279
VpaK11BI GGWCC 5 cut(s) 1168, 1179, 1195, 1206, 1254
XagI CCTNNNNNAGG 1 cut(s) 285
XapI RAATTY 1 cut(s) 10
XhoI CTCGAG 2 cut(s) 699, 777
XmiI GTMKAC 1 cut(s) 1062
XspI CTAG 5 cut(s) 114, 176, 362, 903, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.