pycom01g02520

ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2030518 .. 2037609
7092 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g02520.25

Sequence Viewer

Length: 5301 bp
ATGAACGGTTTGAAGTTTCTTCAAGGGTCGTTGGGGCTTGCTTTGAAGGTTGATGAACGGGTCTTTAAGGGGCTTTTGGGCTTAATCTTGAATAATGGTTGTGCGGATTTCTTCAAGGGGCTTTTGGGCTTAATCTTGAAGAACGGTTGGATGTGTGGATTTGTTGAGGAACGGATGATGAACGATGAACACTTTCTTCAAGGGTCTTCGGGGCTTGATCTTGAGTTGGTAGAAGTTCTTCAAGGGCTAGCTTTCTTGATCCTTCAGGATTTTCTTAGAGCTTTAGAGTTCCAAAGCTTCAAGGTTTTGGTAAGCCTATTTATAGGCTTTAAGAGTGAATCACCACCATCCATTTTTTTTGGTGAAGTGAGTGGATGTTTGTGCGATGTAGGTGAAATGAATAAAGTTTGTAATTTTAATGCATTGGCCAACATTTATTTCACTGAAATTTCGATGTCTACAAATGCCCCCACTTCAAGGCGCGTTGTATACATGTGCTTATGTCGATCGAAGGGCTGTCGAGGCTTGATCTTGAATTGGGCTGGAAATTTCTTCAAGGGCCGTCGGGGCTTGATCTGGAATTCGACTGGAAGATTTTCTGATTTCCTCCAATCGTTGATTTTCCACAAGCTTAATCTTGAACTGGGCTTGAGGGTTTTTTACAGACTTGAACACTTGATTTTGAATCGGACTTGTGATTCCTTCAAGGGCCATCGAGGCTTGATCTTGAATGAAAATAGGACCACGAACGGTTTTAGGATTCGAACACATGGCAGGCAAGCACGAGGTGGGGGTGATGGCCTGTTTCTTTGTTTAATCTTTCCAATTCATATTGAAGAAGGTTGGGATGAATCAGCATATGCAGTTGTTGCGTTTGCTGACGATCCCACAAGATTGATGTTTCATTGTCACTTGTCTTATCTGTTCTCCAGGCAGATGTGGTATCTTCTCTGGAAGTGTATCAACCTTCCAGATCGGAATGCTGATTCTAAGTGCCGGCTAATTGCTCGTTTTCTCCTTGCCCTGCAGAAGATACTTTTGCTTTTGAAGAAGTACTGGCGATTTGATGGCGTCGCGCGGGGAGGCTTTGCTTTTTGGCGACGGTGTCAGCAGAAGGTCGAGCTTGGATTTGACTTAAACTCCTCCGTCTGGATTATGCGGTTCTATAGGGGAGGGCGTTGTGCTACAGTGATTTGTTCCAGCTCATTGTGCTGCATTCTTCTTTGCTTGTTTCTTTTGCATAGCCAAAGTGGTGCACAACCTTTTGCATTTAAATGGTCATTCAGAGCATCACTTCTCAGCGACTCGCCTATGCTTGGCAGCTTCAGTGTAAAGAGCCAACATCATATCAATTCAACACTAGGTAAACAACCAGGCAAAGGTTCTGGGCAATTAGTTCCAGATCGGAAGTTTGATTTCGGGTTCCGACTGATTGCTTTCTTTCTCTTTGTCTGCAGGCAAGAGCAGGGGCAAAGGAAAAGACAGGGGAAAAATACTTTTGCTTTTGAAGAAGTAGCGGATGAATCAGCACATATATTTGTTGCGCTTGTCTCCACATGCTTCGATCTACCGTTTCCTCCTGCCTCATCCGTTCTCCAGACATCTGGTATCTTCTTTGGGGGTACATCAATAGTTGAAGATGAGTACTTGAGAGTAGTGCTGGGTAAGCAATCAGGGAAGGGGTTCCAGGCACATTCTCTTTCTCCTTGTCTTGCAGGGAAGAACAAGAACAAAGGAAAGGACGTGGAAAAGGAGATACGTTTGCTTTTGAAGACTTGGTTGAAGAGGTGTTTTCAAGGAAGAAGAAAACTGAGTATATTGAAAGGTTTGGTTGCAGCTGCATTCTTGGCAAGGAAGAAGAGCCAAGCGTTTTGGAAGTGTGCCTTAGCAGGTAGTGGTGCGGGTGTGGCTTTGTCACCCACGCTTGTCGGTAAAAGTGTGGTAGTTGGAATAGTGGACTCCACGCGTTTTCAGCTTTGTCAGAGATCTTTGACAAAGTTGCATGTGTTATCTGACAAGATAAGGTTGTGTCTAAAAAGTGTCGATGGATTTTGCAAGAAAATCTGGCTTTTGAAGTTCGAAGAATGGTGTCTCTTCGATTTATTACCCGCTCGTGAAACTTGTCCCTGGTGTGTTTCTGAGATTTTACTCCATCTAAACCTTTTCTTTTACCATTTTTTTTTTTTGAAAATGGCCTACCCGTCTAACATCTGCTTAGATTTGAGTCTCGGGAGTGATACGAGCGTGCCACGTCAGGGAAATATATGGCATCCATCCTTCTTATCTTCGAATGGCCATCTTACAGTTGAAGACTCCGTGACGAAGGATGCAACAGCAGCTCAGGTAGTAGCTAGGAACCTTCTTACTCCTAGAGATAATAAGCTACTTTCAAGACGGACCGATGAGCTGGCTGTCCAAGACTCCCTGGCTTTCAGTGTTCAGTGCGCGGGCTCCGTGTCTAATATGGGCCAACGTCTACTTGCTCTAACTCTCCAAGTTGAATCGTTGATGACCAAGGTGGCTAATCTTAAACAAGAGATCAAACAACTCAAGCAAGAAAATAGAGACTGGCACCTGCTTGCCAGAAGAGGAAGCTTGACGAGCATGAAGAGGAAGCTTGACCAGCTGCAAGACTCCGAAGGTCGGATTCAAAGTGACCATCAGAGAGCTCAACCAAATATTGAGGCTCCGAATAATCAACCTCTGGTGCCTCTTCTCCCTGGAGCTCCCACTTTTTTTTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGTACGCATTTATAATTTCTCGGAGATATCAATAGACATGCTTTATTTCATTCAATGTGTTATTTCCCTTTTTTTTTTTTTTTTTATCATACTTTTGCAAAGTGGTGCCGTGCACCATCCTTCCCCTATTTTCTTCTTTGCAATAATTCTGTCGCCACCACCTCTTCTCATTTTCCTTCTTGACTTGCTAAGAGTAGCTTGCAATTGTAAGTGGTTTCAGCTTCTTCATGCTTTCATTTCCAAAAGCTGTAAAAGTAGTACTAATAATTTGTCGGCCCGCGTTTCCCTTTCATCCCTCCAATCTGCTAATTTAAACAATTGGCAATTGGTGCTGCCTTTGAAAGATGCTTCCCAACATCATCATTGTTGCCCTTTTTGTTTTTATTCTTTACCTTCACACGGTATATATATATATATATTTTATTTATTTATTTATTTATTCTTTACCTTCACACGGTATATTATTTATTTATTTTTAAGTGTGTGCACTACTACTCACAAAATGATGTTGCTTTCCACACGCCACCATCACTGCTACCGCACCATCAGTGCTTTTAATATTTTGTTTCTGACTCCCCCTACTGTGCACGGCCCTTCCTTCATGTGCCTCTCTGCTCTGGAGACCATTATATATATAGGACAGCAGCAACTGCAACCACTGTCTTGCTTGCTGCCATACTGTTGCTGTTTGCTGCGCTTACTGCACAAGGGCTGCCCTGAATTTTTTTTTTTTTTTATTATTATTTTTTTAAAAAGTGGTTTAATCCACTCGATGGAGTTCGAGACGATGGGAGGAGCGGACTGCAGTGGTTGTTGCTCAGCATGCCTAAACGTGGTGGTGCTTTCCAGGCACGGGTTCAAGGCTTCAACTTCAACTTTGGCGTTGCTTTGGGCATCCACGATCTTCTTCCTGGTAACCTTTCTACAGAGACCGGGTTTTTTAATGGCCTCATTATGGTGGATAGGAACTTTTGACAGCGATGGCTTCGCGGGGAGGTTCGAGTCATTGCCTAGTTGCTGGCGGCCTTCTGGGATCTGCTGCATGCGCAGAAGAGGGAGGCCACTGAAGAAGACGAGTATAGATGGAGAGCTCCCTAGTTTCGCTGGATCTGCAGCAGCAGACGCACCTCAGTCGATCCTTCCAGTCTATACAACAGCAACAGCCGCCGACGACGGGACGGAAAGGTCCTGCAGGGAAGCTGCAAAGAAAGTTGGTGAATCGCGATCGAGGTGGGTGCGAGGCGGGTTGCACCAACTGGATTTAGGACTGATTCCATCCATTTTGGTCTGGGGGACGACATTTAAGGTAGAGAAAGACCCCACTTTAATATATATATATATATATATATATATAATACACACACACACACATATATATTTGTTTTTTTTAATTTACTTTTTTTTTTTTTTTTTATACAAAGAAAATTGCAATTTTTTTTTTCTACAGGTGCTCACTGCATTCATGGATTTCCTCGTTGTTTTGACGGATTACCCATGTTCACAATTGGTGGCAACTTCTTATGAATTTGCAATTGGTGACAGAGTGAGCAGGATGTGGGTGCAACTGTGCTCTTTGCCTAGTGCTTGTTGCAATGCGTCACTTTTATCGTGCCTTTTGGTCACAACTTTCCTCGGTGGTGACGTTGCCGTGCACACTAACCTTACTGCTTGCCGTGGGCTCTTTGCCACTGCTGCTTGGAGCTTGTTCCAGTGCGTCACCTTTACCATGTGGGGTTGTGTGAAAGACTGCAGCGAGTTTATGTTGTGTAGTGCCTTTTGGTCACAACTTTCCTCGGTGGTGACATTACATTCCTTTAAAGAAATAAAGTATTCATATTTTGAATTTTCTTTTTATGCTTCAAAGTGTTTGTGTTTTTTTGCCTACGTACCCTTGGTTGAGGAGCGATCAAGTCATGACGTAGTTCAAATGAGTGATGGTTTTGATGATGATTTTGCCATACATAGTTTATGCTCTTGCGGGCCAGGAGCATTTGGTTGTCGCCTTTTACGCTCGTGCGGACAAAGAGCTTTTGGTGTTGATTTAGTGCCGTTTGAAGTTTCAGCTCATGTAGGCAAGGAGCATCTTGGTGCTGTTTGCAGTTTCAACTCGTGTAGGAATGTAATTGGATGCATGCATGCAAACATACCTGAATGTGTATCTTGTTCACGTAACATATTCTCATCAAAAGATACAGACTCATGCATTTTGTCAAGAATTGCCAATATTGCACTAACAATCTCCCCCTTTGGCATTTCCTTGACAAAACCCTCAAATACAATATTTCAAAAATTTAAAACTTATGCACTGAAGTCTGTAATCTATGTTGCATGTTTATTAAGAAATAAGGATAATCATTCAACCATCTTTGATCATCCAAAAGAGAAAATAAAAAGAACTCTCCCCCTAACTATAGTCTCTCCCCCTTTTTGTCATAGGAAACCTTCCTCTGGATCATCGTCTGAAGTAGGAGTTGGCAGCGGTGTGCGTTCCAGAATTGGTGGACATGGAGTATGA

Protein Analysis

1767

Amino Acids

199.12

Weight (kDa)

9.02

Isoelectric Point (pI)

47.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000120)

Species Orthologous Gene IDs
malus_domestica MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2799
AarI CACCTGC 1 cut(s) 2583
AasI GACNNNNNNGTC 1 cut(s) 3970
Acc16I TGCGCA 1 cut(s) 3833
Acc36I ACCTGC 2 cut(s) 1880, 2583
AccB1I GGYRCC 3 cut(s) 2571, 2707, 2891
AccB7I CCANNNNNTGG 1 cut(s) 3559
AccBSI CCGCTC 2 cut(s) 2111, 3584
AccI GTMKAC 3 cut(s) 458, 489, 2476
AccII CGCG 8 cut(s) 483, 1076, 1078, 1966, 2447, 3066, 3776, 4009
AclWI GGATC 6 cut(s) 253, 878, 3827, 3901, 3916, 5245
AcoI YGGCCR 2 cut(s) 426, 2293
AcsI RAATTY 7 cut(s) 447, 547, 580, 3506, 4310, 4628, 5075
AcuI CTGAAG 5 cut(s) 248, 1309, 3872, 5114, 5268
AcyI GRCGYC 1 cut(s) 1071
AdeI CACNNNGTG 1 cut(s) 788
AfaI GTAC 6 cut(s) 1055, 1624, 1646, 2790, 3046, 4674
AflIII ACRYGT 2 cut(s) 492, 1964
AjiI CACGTC 2 cut(s) 1744, 2252
AjnI CCWGG 9 cut(s) 929, 1372, 1686, 2126, 2424, 2719, 3632, 3696, 4768
AjuI GAANNNNNNNTTGG 6 cut(s) 422, 454, 4302, 4334, 5241, 5273
Alw26I GTCTC 8 cut(s) 1555, 2096, 2231, 2559, 3401, 3563, 3709, 5206
Alw44I GTGCAC 5 cut(s) 1254, 2897, 3271, 3371, 4436
AlwI GGATC 6 cut(s) 253, 878, 3827, 3901, 3916, 5245
AlwNI CAGNNNCTG 1 cut(s) 3436
Ama87I CYCGRG 1 cut(s) 2228
ApaLI GTGCAC 5 cut(s) 1254, 2897, 3271, 3371, 4436
ApoI RAATTY 7 cut(s) 447, 547, 580, 3506, 4310, 4628, 5075
Asp700I GAANNNNTTC 4 cut(s) 192, 237, 595, 1682
AspLEI GCGC 6 cut(s) 483, 1078, 1546, 2447, 3483, 3834
AspS9I GGNCC 9 cut(s) 559, 709, 741, 2397, 2467, 3061, 3377, 3972, 4766
AsuC2I CCSGG 1 cut(s) 3720
AsuII TTCGAA 3 cut(s) 763, 2079, 2288
AsuNHI GCTAGC 1 cut(s) 247
AvaI CYCGRG 1 cut(s) 2228
AvaII GGWCC 3 cut(s) 741, 2397, 3972
BaeGI GKGCMC 5 cut(s) 1258, 2901, 3275, 3375, 4440
BaeI ACNNNNGTAYC 2 cut(s) 2229, 2262
BalI TGGCCA 2 cut(s) 428, 2295
BanI GGYRCC 3 cut(s) 2571, 2707, 2891
BanII GRGCYC 5 cut(s) 2453, 2671, 2728, 3879, 4467
BarI GAAGNNNNNNTAC 2 cut(s) 222, 254
BauI CACGAG 4 cut(s) 783, 2112, 4798, 4894
BbsI GAAGAC 4 cut(s) 198, 1778, 2316, 3863
BceAI ACGGC 6 cut(s) 546, 2879, 3391, 4418, 4443, 4819
BcgI CGANNNNNNTGC 4 cut(s) 3900, 3934, 4003, 4037
BciT130I CCWGG 9 cut(s) 931, 1374, 1688, 2128, 2426, 2721, 3634, 3698, 4770
BclI TGATCA 1 cut(s) 5155
BcnI CCSGG 1 cut(s) 3720
BcoDI GTCTC 8 cut(s) 1555, 2096, 2231, 2559, 3401, 3563, 3709, 5206
BfaI CTAG 7 cut(s) 248, 1361, 2352, 2370, 3798, 3882, 4365
BfuAI ACCTGC 2 cut(s) 1880, 2583
BglI GCCNNNNNGGC 2 cut(s) 567, 717
BglII AGATCT 1 cut(s) 1985
BlpI GCTNAGC 1 cut(s) 3604
BmcAI AGTACT 3 cut(s) 1055, 1646, 3046
Bme18I GGWCC 3 cut(s) 741, 2397, 3972
BmeT110I CYCGRG 1 cut(s) 2228
BmgBI CACGTC 2 cut(s) 1744, 2252
BmgT120I GGNCC 9 cut(s) 559, 709, 741, 2397, 2467, 3061, 3377, 3972, 4766
BmiI GGNNCC 8 cut(s) 1424, 1685, 2357, 2452, 2573, 2688, 2709, 2893
BmrI ACTGGG 1 cut(s) 653
BmsI GCATC 7 cut(s) 1298, 2278, 2317, 3121, 3689, 4876, 4904
BmtI GCTAGC 1 cut(s) 251
BmuI ACTGGG 1 cut(s) 653
BpiI GAAGAC 4 cut(s) 198, 1778, 2316, 3863
BpmI CTGGAG 4 cut(s) 913, 1580, 2742, 3425
Bpu10I CCTNAGC 2 cut(s) 1885, 2340
Bpu1102I GCTNAGC 1 cut(s) 3604
Bpu14I TTCGAA 3 cut(s) 763, 2079, 2288
BpuEI CTTGAG 4 cut(s) 242, 670, 1669, 2534
BpuMI CCSGG 1 cut(s) 3720
BsaAI YACGTR 2 cut(s) 4672, 4955
BsaHI GRCGYC 1 cut(s) 1071
BsaI GGTCTC 2 cut(s) 3401, 3709
BsaJI CCNNGG 8 cut(s) 2126, 2424, 2514, 2719, 4417, 4459, 4578, 4677
BsaXI ACNNNNNCTCC 2 cut(s) 1124, 1154
Bse118I RCCGGY 1 cut(s) 996
Bse1I ACTGG 7 cut(s) 592, 648, 1061, 2573, 3929, 4047, 4495
Bse3DI GCAATG 2 cut(s) 3791, 4384
BseBI CCWGG 9 cut(s) 931, 1374, 1688, 2128, 2426, 2721, 3634, 3698, 4770
BseDI CCNNGG 8 cut(s) 2126, 2424, 2514, 2719, 4417, 4459, 4578, 4677
BseMI GCAATG 2 cut(s) 3791, 4384
BseMII CTCAG 6 cut(s) 1312, 1802, 2130, 2354, 3618, 3929
BseNI ACTGG 7 cut(s) 592, 648, 1061, 2573, 3929, 4047, 4495
BseRI GAGGAG 3 cut(s) 1132, 3594, 4700
BseSI GKGCMC 5 cut(s) 1258, 2901, 3275, 3375, 4440
BseYI CCCAGC 1 cut(s) 1660
BsgI GTGCAG 1 cut(s) 3473
Bsh1236I CGCG 8 cut(s) 483, 1076, 1078, 1966, 2447, 3066, 3776, 4009
Bsh1285I CGRYCG 2 cut(s) 509, 4013
BshNI GGYRCC 3 cut(s) 2571, 2707, 2891
BsiEI CGRYCG 2 cut(s) 509, 4013
BsiHKCI CYCGRG 1 cut(s) 2228
BsiSI CCGG 2 cut(s) 997, 3719
BslFI GGGAC 3 cut(s) 2109, 3976, 4093
BsmAI GTCTC 8 cut(s) 1555, 2096, 2231, 2559, 3401, 3563, 3709, 5206
BsmBI CGTCTC 1 cut(s) 3563
BsmFI GGGAC 3 cut(s) 2109, 3976, 4093
BsmI GAATGC 4 cut(s) 985, 1215, 1841, 4244
Bso31I GGTCTC 2 cut(s) 3401, 3709
BsoBI CYCGRG 1 cut(s) 2228
Bsp119I TTCGAA 3 cut(s) 763, 2079, 2288
Bsp1720I GCTNAGC 1 cut(s) 3604
Bsp68I TCGCGA 1 cut(s) 4009
BspCNI CTCAG 6 cut(s) 1311, 1803, 2131, 2353, 3617, 3928
BspFNI CGCG 8 cut(s) 483, 1076, 1078, 1966, 2447, 3066, 3776, 4009
BspHI TCATGA 1 cut(s) 4699
BspLI GGNNCC 8 cut(s) 1424, 1685, 2357, 2452, 2573, 2688, 2709, 2893
BspMAI CTGCAG 6 cut(s) 1029, 1457, 3593, 3901, 3980, 4538
BspMI ACCTGC 2 cut(s) 1880, 2583
BspOI GCTAGC 1 cut(s) 251
BspPI GGATC 6 cut(s) 253, 878, 3827, 3901, 3916, 5245
BspQI GCTCTTC 1 cut(s) 1853
BspT104I TTCGAA 3 cut(s) 763, 2079, 2288
BspT107I GGYRCC 3 cut(s) 2571, 2707, 2891
BspTNI GGTCTC 2 cut(s) 3401, 3709
BsrBI CCGCTC 2 cut(s) 2111, 3584
BsrDI GCAATG 2 cut(s) 3791, 4384
BsrFI RCCGGY 1 cut(s) 996
BsrI ACTGG 7 cut(s) 592, 648, 1061, 2573, 3929, 4047, 4495
BssAI RCCGGY 1 cut(s) 996
BssECI CCNNGG 8 cut(s) 2126, 2424, 2514, 2719, 4417, 4459, 4578, 4677
BssNAI GTATAC 1 cut(s) 490
BssNI GRCGYC 1 cut(s) 1071
BssSI CACGAG 4 cut(s) 783, 2112, 4798, 4894
BssT1I CCWWGG 2 cut(s) 2514, 4677
Bst1107I GTATAC 1 cut(s) 490
Bst2BI CACGAG 4 cut(s) 783, 2112, 4798, 4894
Bst2UI CCWGG 9 cut(s) 931, 1374, 1688, 2128, 2426, 2721, 3634, 3698, 4770
Bst6I CTCTTC 8 cut(s) 1778, 1853, 2099, 2581, 2603, 2718, 2955, 3832
BstACI GRCGYC 1 cut(s) 1071
BstAPI GCANNNNNTGC 3 cut(s) 869, 3115, 3436
BstBAI YACGTR 2 cut(s) 4672, 4955
BstBI TTCGAA 3 cut(s) 763, 2079, 2288
BstDSI CCRYGG 1 cut(s) 4459
BstEII GGTNACC 1 cut(s) 3700
BstFNI CGCG 8 cut(s) 483, 1076, 1078, 1966, 2447, 3066, 3776, 4009
BstHHI GCGC 6 cut(s) 483, 1078, 1546, 2447, 3483, 3834
BstMAI GTCTC 8 cut(s) 1555, 2096, 2231, 2559, 3401, 3563, 3709, 5206
BstMCI CGRYCG 2 cut(s) 509, 4013
BstNI CCWGG 9 cut(s) 931, 1374, 1688, 2128, 2426, 2721, 3634, 3698, 4770
BstNSI RCATGY 9 cut(s) 496, 1560, 2006, 2827, 3612, 3832, 4921, 4925, 5118
BstPI GGTNACC 1 cut(s) 3700
BstSLI GKGCMC 5 cut(s) 1258, 2901, 3275, 3375, 4440
BstSNI TACGTA 1 cut(s) 4672
BstUI CGCG 8 cut(s) 483, 1076, 1078, 1966, 2447, 3066, 3776, 4009
BstV2I GAAGAC 4 cut(s) 198, 1778, 2316, 3863
BstX2I RGATCY 3 cut(s) 1985, 3819, 3893
BstXI CCANNNNNNTGG 1 cut(s) 1604
BstYI RGATCY 3 cut(s) 1985, 3819, 3893
BstZ17I GTATAC 1 cut(s) 490
BtgI CCRYGG 1 cut(s) 4459
BtgZI GCGATG 2 cut(s) 399, 3780
BtrI CACGTC 2 cut(s) 1744, 2252
BtsI GCAGTG 4 cut(s) 3316, 3598, 4239, 4473
BtuMI TCGCGA 1 cut(s) 4009
BveI ACCTGC 2 cut(s) 1880, 2583
CaiI CAGNNNCTG 1 cut(s) 3436
CciI TCATGA 1 cut(s) 4699
CfoI GCGC 6 cut(s) 483, 1078, 1546, 2447, 3483, 3834
Cfr10I RCCGGY 1 cut(s) 996
Cfr13I GGNCC 9 cut(s) 559, 709, 741, 2397, 2467, 3061, 3377, 3972, 4766
CpoI CGGWCCG 1 cut(s) 2397
CseI GACGC 4 cut(s) 1060, 3917, 4371, 4489
Csp6I GTAC 6 cut(s) 1054, 1623, 1645, 2789, 3045, 4673
CspI CGGWCCG 1 cut(s) 2397
CviQI GTAC 6 cut(s) 1054, 1623, 1645, 2789, 3045, 4673
DraI TTTAAA 5 cut(s) 1273, 3099, 3537, 4603, 5080
DraIII CACNNNGTG 1 cut(s) 788
DrdI GACNNNNNNGTC 1 cut(s) 3970
DseDI GACNNNNNNGTC 1 cut(s) 3970
EaeI YGGCCR 2 cut(s) 426, 2293
Eam1104I CTCTTC 8 cut(s) 1778, 1853, 2099, 2581, 2603, 2718, 2955, 3832
EarI CTCTTC 8 cut(s) 1778, 1853, 2099, 2581, 2603, 2718, 2955, 3832
Ecl136II GAGCTC 3 cut(s) 2669, 2726, 3877
Eco105I TACGTA 1 cut(s) 4672
Eco130I CCWWGG 2 cut(s) 2514, 4677
Eco24I GRGCYC 5 cut(s) 2453, 2671, 2728, 3879, 4467
Eco31I GGTCTC 2 cut(s) 3401, 3709
Eco32I GATATC 1 cut(s) 2814
Eco47I GGWCC 3 cut(s) 741, 2397, 3972
Eco53kI GAGCTC 3 cut(s) 2669, 2726, 3877
Eco57I CTGAAG 5 cut(s) 248, 1309, 3872, 5114, 5268
Eco88I CYCGRG 1 cut(s) 2228
Eco91I GGTNACC 1 cut(s) 3700
EcoICRI GAGCTC 3 cut(s) 2669, 2726, 3877
EcoO109I RGGNCCY 1 cut(s) 3972
EcoO65I GGTNACC 1 cut(s) 3700
EcoRI GAATTC 1 cut(s) 580
EcoRII CCWGG 9 cut(s) 929, 1372, 1686, 2126, 2424, 2719, 3632, 3696, 4768
EcoRV GATATC 1 cut(s) 2814
EcoT14I CCWWGG 2 cut(s) 2514, 4677
EcoT22I ATGCAT 4 cut(s) 424, 4919, 4923, 4991
EcoT38I GRGCYC 5 cut(s) 2453, 2671, 2728, 3879, 4467
ErhI CCWWGG 2 cut(s) 2514, 4677
Esp3I CGTCTC 1 cut(s) 3563
FalI AAGNNNNNCTT 4 cut(s) 1868, 1900, 2968, 3000
FaqI GGGAC 3 cut(s) 2109, 3976, 4093
FauI CCCGC 8 cut(s) 1071, 1894, 2116, 2440, 3071, 3769, 4022, 4757
FauNDI CATATG 1 cut(s) 859
FbaI TGATCA 1 cut(s) 5155
FblI GTMKAC 3 cut(s) 458, 489, 2476
FriOI GRGCYC 5 cut(s) 2453, 2671, 2728, 3879, 4467
FspBI CTAG 7 cut(s) 248, 1361, 2352, 2370, 3798, 3882, 4365
FspI TGCGCA 1 cut(s) 3833
GlaI GCGC 6 cut(s) 482, 1077, 1545, 2446, 3482, 3833
GsaI CCCAGC 1 cut(s) 1664
GsuI CTGGAG 4 cut(s) 913, 1580, 2742, 3425
HapII CCGG 2 cut(s) 997, 3719
HgaI GACGC 4 cut(s) 1060, 3917, 4371, 4489
HhaI GCGC 6 cut(s) 483, 1078, 1546, 2447, 3483, 3834
Hin1I GRCGYC 1 cut(s) 1071
Hin6I GCGC 6 cut(s) 481, 1076, 1544, 2445, 3481, 3832
HinP1I GCGC 6 cut(s) 481, 1076, 1544, 2445, 3481, 3832
HindIII AAGCTT 4 cut(s) 295, 629, 2593, 2615
HpaII CCGG 2 cut(s) 997, 3719
Hpy99I CGWCG 5 cut(s) 567, 1076, 1104, 3959, 3962
HpyCH4IV ACGT 9 cut(s) 1743, 1759, 2251, 2473, 3618, 4428, 4671, 4704, 4954
HpySE526I ACGT 9 cut(s) 1743, 1759, 2251, 2473, 3618, 4428, 4671, 4704, 4954
Hsp92I GRCGYC 1 cut(s) 1071
HspAI GCGC 6 cut(s) 481, 1076, 1544, 2445, 3481, 3832
KroI GCCGGC 1 cut(s) 996
KroNI GCCGGC 1 cut(s) 998
Ksp22I TGATCA 1 cut(s) 5155
LguI GCTCTTC 1 cut(s) 1853
LweI GCATC 7 cut(s) 1298, 2278, 2317, 3121, 3689, 4876, 4904
MaeI CTAG 7 cut(s) 248, 1361, 2352, 2370, 3798, 3882, 4365
MaeII ACGT 9 cut(s) 1743, 1759, 2251, 2473, 3618, 4428, 4671, 4704, 4954
MbiI CCGCTC 2 cut(s) 2111, 3584
MfeI CAATTG 5 cut(s) 2989, 3103, 3110, 4289, 4317
MflI RGATCY 3 cut(s) 1985, 3819, 3893
MlsI TGGCCA 2 cut(s) 428, 2295
MluI ACGCGT 1 cut(s) 1964
MluNI TGGCCA 2 cut(s) 428, 2295
MlyI GAGTC 9 cut(s) 1298, 1952, 2233, 2306, 2414, 2627, 3352, 3797, 4976
MmeI TCCRAC 4 cut(s) 128, 1450, 1927, 2624
Mox20I TGGCCA 2 cut(s) 428, 2295
Mph1103I ATGCAT 4 cut(s) 424, 4919, 4923, 4991
MroNI GCCGGC 1 cut(s) 996
MroXI GAANNNNTTC 4 cut(s) 192, 237, 595, 1682
MscI TGGCCA 2 cut(s) 428, 2295
MslI CAYNNNNRTG 3 cut(s) 1273, 3742, 4872
Msp20I TGGCCA 2 cut(s) 428, 2295
MspA1I CMGCKG 3 cut(s) 1838, 2626, 5265
MspI CCGG 2 cut(s) 997, 3719
MunI CAATTG 5 cut(s) 2989, 3103, 3110, 4289, 4317
Mva1269I GAATGC 4 cut(s) 985, 1215, 1841, 4244
MvaI CCWGG 9 cut(s) 931, 1374, 1688, 2128, 2426, 2721, 3634, 3698, 4770
MvnI CGCG 8 cut(s) 483, 1076, 1078, 1966, 2447, 3066, 3776, 4009
NaeI GCCGGC 1 cut(s) 998
NciI CCSGG 1 cut(s) 3720
NdeI CATATG 1 cut(s) 859
NgoMIV GCCGGC 1 cut(s) 996
NheI GCTAGC 1 cut(s) 247
NlaIV GGNNCC 8 cut(s) 1424, 1685, 2357, 2452, 2573, 2688, 2709, 2893
NruI TCGCGA 1 cut(s) 4009
NsbI TGCGCA 1 cut(s) 3833
NsiI ATGCAT 4 cut(s) 424, 4919, 4923, 4991
NspI RCATGY 9 cut(s) 496, 1560, 2006, 2827, 3612, 3832, 4921, 4925, 5118
NspV TTCGAA 3 cut(s) 763, 2079, 2288
PaeI GCATGC 4 cut(s) 3612, 3832, 4921, 4925
PagI TCATGA 1 cut(s) 4699
PaqCI CACCTGC 1 cut(s) 2583
PciI ACATGT 1 cut(s) 492
PciSI GCTCTTC 1 cut(s) 1853
PcsI WCGNNNNNNNCGW 1 cut(s) 4425
PctI GAATGC 4 cut(s) 985, 1215, 1841, 4244
PdiI GCCGGC 1 cut(s) 998
PdmI GAANNNNTTC 4 cut(s) 192, 237, 595, 1682
PflFI GACNNNGTC 1 cut(s) 1104
PflMI CCANNNNNTGG 1 cut(s) 3559
Ple19I CGATCG 2 cut(s) 509, 4013
PleI GAGTC 9 cut(s) 1298, 1952, 2232, 2306, 2414, 2627, 3352, 3796, 4976
PpsI GAGTC 9 cut(s) 1298, 1952, 2232, 2306, 2414, 2627, 3352, 3796, 4976
Ppu21I YACGTR 2 cut(s) 4672, 4955
PpuMI RGGWCCY 1 cut(s) 3972
PscI ACATGT 1 cut(s) 492
PsiI TTATAA 1 cut(s) 2799
Psp124BI GAGCTC 3 cut(s) 2671, 2728, 3879
Psp5II RGGWCCY 1 cut(s) 3972
Psp6I CCWGG 9 cut(s) 929, 1372, 1686, 2126, 2424, 2719, 3632, 3696, 4768
PspEI GGTNACC 1 cut(s) 3700
PspFI CCCAGC 1 cut(s) 1660
PspGI CCWGG 9 cut(s) 929, 1372, 1686, 2126, 2424, 2719, 3632, 3696, 4768
PspN4I GGNNCC 8 cut(s) 1424, 1685, 2357, 2452, 2573, 2688, 2709, 2893
PspPI GGNCC 9 cut(s) 559, 709, 741, 2397, 2467, 3061, 3377, 3972, 4766
PspPPI RGGWCCY 1 cut(s) 3972
PstI CTGCAG 6 cut(s) 1029, 1457, 3593, 3901, 3980, 4538
PstNI CAGNNNCTG 1 cut(s) 3436
PsuI RGATCY 3 cut(s) 1985, 3819, 3893
PsyI GACNNNGTC 1 cut(s) 1104
PvuI CGATCG 2 cut(s) 509, 4013
PvuII CAGCTG 2 cut(s) 1838, 2626
RruI TCGCGA 1 cut(s) 4009
RsaI GTAC 6 cut(s) 1055, 1624, 1646, 2790, 3046, 4674
RsaNI GTAC 6 cut(s) 1054, 1623, 1645, 2789, 3045, 4673
RseI CAYNNNNRTG 3 cut(s) 1273, 3742, 4872
Rsr2I CGGWCCG 1 cut(s) 2397
RsrII CGGWCCG 1 cut(s) 2397
SacI GAGCTC 3 cut(s) 2671, 2728, 3879
SapI GCTCTTC 1 cut(s) 1853
Sau96I GGNCC 9 cut(s) 559, 709, 741, 2397, 2467, 3061, 3377, 3972, 4766
SbfI CCTGCAGG 1 cut(s) 3980
ScaI AGTACT 3 cut(s) 1055, 1646, 3046
SchI GAGTC 9 cut(s) 1298, 1952, 2233, 2306, 2414, 2627, 3352, 3797, 4976
SdaI CCTGCAGG 1 cut(s) 3980
SfaNI GCATC 7 cut(s) 1298, 2278, 2317, 3121, 3689, 4876, 4904
SfuI TTCGAA 3 cut(s) 763, 2079, 2288
SinI GGWCC 3 cut(s) 741, 2397, 3972
SmiI ATTTAAAT 1 cut(s) 1273
SmiMI CAYNNNNRTG 3 cut(s) 1273, 3742, 4872
SmlI CTYRAG 4 cut(s) 221, 649, 1648, 2549
SmoI CTYRAG 4 cut(s) 221, 649, 1648, 2549
SnaBI TACGTA 1 cut(s) 4672
SphI GCATGC 4 cut(s) 3612, 3832, 4921, 4925
Sse8387I CCTGCAGG 1 cut(s) 3980
SspI AATATT 4 cut(s) 2680, 3346, 5011, 5067
SspMI CTAG 7 cut(s) 248, 1361, 2352, 2370, 3798, 3882, 4365
SstI GAGCTC 3 cut(s) 2671, 2728, 3879
StyI CCWWGG 2 cut(s) 2514, 4677
SwaI ATTTAAAT 1 cut(s) 1273
TaiI ACGT 9 cut(s) 1746, 1762, 2254, 2476, 3621, 4431, 4674, 4707, 4957
TaqII GACCGA 1 cut(s) 2414
TatI WGTACW 3 cut(s) 1053, 1644, 3044
TauI GCSGC 2 cut(s) 3811, 3953
TspGWI ACGGA 8 cut(s) 187, 1135, 1579, 2305, 2410, 2443, 3980, 4286
Tth111I GACNNNGTC 1 cut(s) 1104
Van91I CCANNNNNTGG 1 cut(s) 3559
VneI GTGCAC 5 cut(s) 1254, 2897, 3271, 3371, 4436
VpaK11BI GGWCC 3 cut(s) 741, 2397, 3972
XapI RAATTY 7 cut(s) 447, 547, 580, 3506, 4310, 4628, 5075
XceI RCATGY 9 cut(s) 496, 1560, 2006, 2827, 3612, 3832, 4921, 4925, 5118
XmiI GTMKAC 3 cut(s) 458, 489, 2476
XmnI GAANNNNTTC 4 cut(s) 192, 237, 595, 1682
XspI CTAG 7 cut(s) 248, 1361, 2352, 2370, 3798, 3882, 4365
ZrmI AGTACT 3 cut(s) 1055, 1646, 3046
Zsp2I ATGCAT 4 cut(s) 424, 4919, 4923, 4991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.