Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00012426

Orthogroup ID

OG0000120

Physical Location & Seq

Genomic Coordinates Forward (+)

194154 .. 196394

Gene Structure 2241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12426g00350.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGAATCAGCACATGTATTTGTTGTGCTATTTCCTCCTGGGTCATCTGTACTCCAGGCATCTGGTATCATCTTTGGGGAAGAAGAAAAAATTGAGTAATTCGAAAGGCTTTGCTGGGAGTGCGCCCTCAGAGGTGAGGGAGAGTTGGGCATTTTCTTTAGGTTTGCCTTGCCATAAAAGACGAAGGTCGACATATATAGAGATAATATCAAGTGGTGGTACTGTTCGTTTACCCTTGTCGACAAATCAGGCGCCCCTTCGATTTCTGAACGACGCCCCTTTGCTTTCTGAACGACACGTAGTAGTGCGGATGCGGCTCCTTTTGACAAAGCTGCACGCGTTTTCTGAAAAGCAGAGAAAGCGTCGCCGAACTTTGCTCTTGTCGGCTAAAGATGTAAATCTTTTGACAAAGTTGAACGCGTCTTCTAAAAAGCCGAGAACGCGTCGCCTAAATTACGCCGGAAATTCCGGCTTTTTGAATTGGTGGACGCGTCGCCTTGAATTCCCATTCTTGAAAATCGACTCCGACCCTTTGAAAATTTACTCCATCAACCCCATCTCTTTGAACACTTCTGAAAAAATGGCAAACTCATCGAACCTTAGCTTAGAATTGAGTCTCAGCAGTGATACGGGTGCGCCGCGTCAAGGTAACGTATGGCGCCCTTCTTTCTTATCTTCTAACGGTCCTCTTACAGGTGAAGACTCCGTGATGCAGGACGCGACAACAGCTACAATAGTAGCTAGGAGCCTCCTCACTCCAAAAGATAGTAGGCTGCTGTCAGGACGGTCCGATGAGTTGGCCGTTCAAGAGTCCCTTGCACTTAGTGTTCAGTGTGCGAGTTCTGTGTCCAACATGGACCAACGCCTGCTTGCCCGCTCCCGTCAGGTGGAATCATTGATGGCAGAGGTGGAAAGTCTCAAGCAGGAGATCCAGCAGCTTAAGTACGAGAATAGAAGTTTGCACGTGCTTGTAAACAACTATTCGACGGGCATGAAGAGGAAGCTTGATGAGCTGCAAGAGTCTGAAGGTCGGATTCAAAGTGACCGTCAAAGGTTTTCGTCTTTCCTCCAGAGGCACCTTTTTCCTCGATCATCCAGCGTTTGGCCAAGTATTGAGGCCTGGAATGCTCTAGCTCCGATGCCTCCCGCTCCGATGCCTTCCCCTCCGATGCCTTCCGCTTCAATGCCTTCCGCTTCGACGCCTCGTAGTGGGGCTTCACGTAAACAACCTTTATATATTTTTTTTTTTTTTTCAGGGCATTGGGTTGCCTCCCAAGTAGCGCTTTCTTTTACGTCTTGCAGCCGGACGAAGAACCCAATCACTCCAGGATATGTTCACGAATTGGATGAGAACTCCGAAAAAACAAACAAAAATAAAACAATCCAAGGGATTAGCAAATTTTCTAATCCCCGGCATCGGCGCCAAAATTTGATGCGTGATTTATACGTGCAAGTAGGGATCGTTCTAGACCGGGGATTAGGAGGGATTGTTAACCACTTGGATTTGACTCAAAAACACTCAAACATCACCCAAAACACTAAAAACTGCCTTAAAATCACTTTCTGGGCAGTTTTGAGCACTTTGGTGAATTTGGACGAATTTATACACTTTCTAACTAAATTGGACAATAAATGTAAAACGAATTTGATGGAATGGAATGAATGGATGATAGAATGGCTAAGGGGTTCATCTCCATACATGTTATACTTGCATAATAAACGATTTCCAATTGCATTTCAACAAATCATTAATTCTCAACACCCCAAGTTAACCGTGATGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

595

Amino Acids

67.54

Weight (kDa)

10.1

Isoelectric Point (pI)

55.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000120)

Species	Orthologous Gene IDs
malus_domestica	MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica	Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis	pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	250, 657, 1074, 1419
AccB7I	CCANNNNNTGG	1 cut(s)	1101
AccBSI	CCGCTC	2 cut(s)	876, 1148
AccI	GTMKAC	2 cut(s)	188, 239
AccII	CGCG	6 cut(s)	338, 419, 442, 490, 640, 719
AciI	CCGC	7 cut(s)	307, 313, 638, 874, 1146, 1176, 1191
AclWI	GGATC	2 cut(s)	922, 1466
AcoI	YGGCCR	2 cut(s)	798, 1103
AcsI	RAATTY	8 cut(s)	463, 500, 537, 1397, 1426, 1588, 1598, 1642
AcuI	CTGAAG	1 cut(s)	1044
AcvI	CACGTG	1 cut(s)	964
AcyI	GRCGYC	5 cut(s)	251, 273, 658, 1199, 1420
AdeI	CACNNNGTG	1 cut(s)	824
AfaI	GTAC	3 cut(s)	50, 220, 944
AfeI	AGCGCT	1 cut(s)	1281
AfiI	CCNNNNNNNGG	6 cut(s)	644, 692, 886, 1101, 1208, 1416
AflII	CTTAAG	1 cut(s)	938
AflIII	ACRYGT	7 cut(s)	12, 295, 336, 417, 440, 488, 1698
AjnI	CCWGG	4 cut(s)	36, 53, 1118, 1324
AleI	CACNNNNGTG	1 cut(s)	1583
AluBI	AGCT	8 cut(s)	331, 603, 728, 740, 937, 1003, 1012, 1133
AluI	AGCT	8 cut(s)	331, 603, 728, 740, 937, 1003, 1012, 1133
Alw21I	GWGCWC	1 cut(s)	1580
Alw26I	GTCTC	2 cut(s)	620, 920
AlwI	GGATC	2 cut(s)	922, 1466
Aor51HI	AGCGCT	1 cut(s)	1281
AoxI	GGCC	3 cut(s)	798, 1103, 1116
ApeKI	GCWGC	5 cut(s)	331, 772, 934, 1012, 1299
ApoI	RAATTY	8 cut(s)	463, 500, 537, 1397, 1426, 1588, 1598, 1642
ArsI	GACNNNNNNTTYG	2 cut(s)	1030, 1062
AseI	ATTAAT	1 cut(s)	1749
AspLEI	GCGC	6 cut(s)	124, 253, 637, 660, 1282, 1422
AspS9I	GGNCC	3 cut(s)	683, 786, 856
AsuC2I	CCSGG	2 cut(s)	1411, 1472
AsuHPI	GGTGA	4 cut(s)	145, 707, 1519, 1597
AsuII	TTCGAA	1 cut(s)	101
AvaII	GGWCC	3 cut(s)	683, 786, 856
BalI	TGGCCA	1 cut(s)	1105
BanI	GGYRCC	4 cut(s)	250, 657, 1074, 1419
BarI	GAAGNNNNNNTAC	2 cut(s)	1198, 1230
BbrPI	CACGTG	1 cut(s)	964
BbsI	GAAGAC	2 cut(s)	414, 705
Bbv12I	GWGCWC	1 cut(s)	1580
BbvI	GCAGC	5 cut(s)	318, 759, 946, 999, 1311
BccI	CCATC	4 cut(s)	554, 563, 892, 1642
BceAI	ACGGC	1 cut(s)	785
BcgI	CGANNNNNNTGC	2 cut(s)	573, 607
BciT130I	CCWGG	4 cut(s)	38, 55, 1120, 1326
BcnI	CCSGG	2 cut(s)	1411, 1472
BcoDI	GTCTC	2 cut(s)	620, 920
BfaI	CTAG	3 cut(s)	741, 1130, 1466
BfoI	RGCGCY	4 cut(s)	254, 661, 1283, 1423
BfrI	CTTAAG	1 cut(s)	938
BisI	GCNGC	7 cut(s)	314, 332, 638, 773, 935, 1013, 1300
BlsI	GCNGC	7 cut(s)	315, 333, 639, 774, 936, 1014, 1301
Bme1390I	CCNGG	6 cut(s)	38, 55, 1120, 1326, 1411, 1472
Bme18I	GGWCC	3 cut(s)	683, 786, 856
BmgT120I	GGNCC	3 cut(s)	683, 786, 856
BmiI	GGNNCC	6 cut(s)	252, 317, 659, 746, 1076, 1421
BmrFI	CCNGG	6 cut(s)	38, 55, 1120, 1326, 1411, 1472
BmsI	GCATC	9 cut(s)	67, 300, 699, 1128, 1143, 1158, 1422, 1423, 1767
BoxI	GACNNNNGTC	1 cut(s)	184
BpiI	GAAGAC	2 cut(s)	414, 705
BpmI	CTGGAG	3 cut(s)	37, 1052, 1308
Bpu10I	CCTNAGC	2 cut(s)	599, 1679
Bpu14I	TTCGAA	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	902
BpuMI	CCSGG	2 cut(s)	1411, 1472
BsaAI	YACGTR	4 cut(s)	298, 964, 1220, 1447
BsaBI	GATNNNNATC	1 cut(s)	396
BsaHI	GRCGYC	5 cut(s)	251, 273, 658, 1199, 1420
BsaJI	CCNNGG	4 cut(s)	37, 1384, 1409, 1471
BsaXI	ACNNNNNCTCC	2 cut(s)	1473, 1503
Bsc4I	CCNNNNNNNGG	6 cut(s)	644, 692, 886, 1101, 1208, 1416
Bse8I	GATNNNNATC	1 cut(s)	396
BseBI	CCWGG	4 cut(s)	38, 55, 1120, 1326
BseDI	CCNNGG	4 cut(s)	37, 1384, 1409, 1471
BseGI	GGATG	4 cut(s)	315, 1091, 1351, 1671
BseJI	GATNNNNATC	1 cut(s)	396
BseLI	CCNNNNNNNGG	6 cut(s)	644, 692, 886, 1101, 1208, 1416
BseMII	CTCAG	2 cut(s)	141, 631
BseRI	GAGGAG	1 cut(s)	740
BseXI	GCAGC	5 cut(s)	318, 759, 946, 999, 1311
BseYI	CCCAGC	1 cut(s)	113
BsgI	GTGCAG	1 cut(s)	317
Bsh1236I	CGCG	6 cut(s)	338, 419, 442, 490, 640, 719
BshFI	GGCC	3 cut(s)	800, 1105, 1118
BshNI	GGYRCC	4 cut(s)	250, 657, 1074, 1419
BsiHKAI	GWGCWC	1 cut(s)	1580
BsiSI	CCGG	5 cut(s)	459, 468, 1303, 1411, 1471
BslFI	GGGAC	1 cut(s)	796
BslI	CCNNNNNNNGG	6 cut(s)	644, 692, 886, 1101, 1208, 1416
BsmAI	GTCTC	2 cut(s)	620, 920
BsmFI	GGGAC	1 cut(s)	796
BsmI	GAATGC	1 cut(s)	1129
BsnI	GGCC	3 cut(s)	800, 1105, 1118
Bsp119I	TTCGAA	1 cut(s)	101
Bsp1286I	GDGCHC	1 cut(s)	1580
Bsp143I	GATC	3 cut(s)	927, 1088, 1458
BspACI	CCGC	7 cut(s)	307, 313, 638, 874, 1146, 1176, 1191
BspANI	GGCC	3 cut(s)	800, 1105, 1118
BspCNI	CTCAG	2 cut(s)	140, 630
BspFNI	CGCG	6 cut(s)	338, 419, 442, 490, 640, 719
BspLI	GGNNCC	6 cut(s)	252, 317, 659, 746, 1076, 1421
BspPI	GGATC	2 cut(s)	922, 1466
BspT104I	TTCGAA	1 cut(s)	101
BspT107I	GGYRCC	4 cut(s)	250, 657, 1074, 1419
BspTI	CTTAAG	1 cut(s)	938
BsrBI	CCGCTC	2 cut(s)	876, 1148
BssECI	CCNNGG	4 cut(s)	37, 1384, 1409, 1471
BssMI	GATC	3 cut(s)	927, 1088, 1458
BssNI	GRCGYC	5 cut(s)	251, 273, 658, 1199, 1420
BssT1I	CCWWGG	1 cut(s)	1384
Bst2UI	CCWGG	4 cut(s)	38, 55, 1120, 1326
Bst4CI	ACNGT	5 cut(s)	223, 683, 786, 1046, 1774
Bst6I	CTCTTC	1 cut(s)	989
BstACI	GRCGYC	5 cut(s)	251, 273, 658, 1199, 1420
BstAFI	CTTAAG	1 cut(s)	938
BstBAI	YACGTR	4 cut(s)	298, 964, 1220, 1447
BstBI	TTCGAA	1 cut(s)	101
BstC8I	GCNNGC	4 cut(s)	336, 866, 870, 874
BstDEI	CTNAG	6 cut(s)	127, 599, 604, 617, 821, 1679
BstENI	CCTNNNNNAGG	1 cut(s)	690
BstF5I	GGATG	4 cut(s)	315, 1091, 1351, 1671
BstFNI	CGCG	6 cut(s)	338, 419, 442, 490, 640, 719
BstH2I	RGCGCY	4 cut(s)	254, 661, 1283, 1423
BstHHI	GCGC	6 cut(s)	124, 253, 637, 660, 1282, 1422
BstKTI	GATC	3 cut(s)	930, 1091, 1461
BstMAI	GTCTC	2 cut(s)	620, 920
BstMBI	GATC	3 cut(s)	927, 1088, 1458
BstMWI	GCNNNNNNNGC	7 cut(s)	119, 313, 358, 439, 725, 1009, 1124
BstNI	CCWGG	4 cut(s)	38, 55, 1120, 1326
BstNSI	RCATGY	2 cut(s)	16, 1702
BstPAI	GACNNNNGTC	1 cut(s)	184
BstSCI	CCNGG	6 cut(s)	36, 53, 1118, 1324, 1409, 1470
BstUI	CGCG	6 cut(s)	338, 419, 442, 490, 640, 719
BstV1I	GCAGC	5 cut(s)	318, 759, 946, 999, 1311
BstV2I	GAAGAC	2 cut(s)	414, 705
BstX2I	RGATCY	1 cut(s)	927
BstXI	CCANNNNNNTGG	1 cut(s)	61
BstYI	RGATCY	1 cut(s)	927
BsuRI	GGCC	3 cut(s)	800, 1105, 1118
BtsCI	GGATG	4 cut(s)	315, 1091, 1351, 1671
BtsI	GCAGTG	1 cut(s)	628
BtsIMutI	CAGTG	2 cut(s)	628, 836
Cac8I	GCNNGC	4 cut(s)	336, 866, 870, 874
CfoI	GCGC	6 cut(s)	124, 253, 637, 660, 1282, 1422
Cfr13I	GGNCC	3 cut(s)	683, 786, 856
CpoI	CGGWCCG	1 cut(s)	786
CseI	GACGC	9 cut(s)	281, 350, 408, 431, 479, 496, 629, 725, 1207
Csp6I	GTAC	3 cut(s)	49, 219, 943
CspI	CGGWCCG	1 cut(s)	786
CviAII	CATG	4 cut(s)	13, 853, 991, 1699
CviQI	GTAC	3 cut(s)	49, 219, 943
DdeI	CTNAG	6 cut(s)	127, 599, 604, 617, 821, 1679
DinI	GGCGCC	3 cut(s)	252, 659, 1421
DpnI	GATC	3 cut(s)	929, 1090, 1460
DpnII	GATC	3 cut(s)	927, 1088, 1458
DraIII	CACNNNGTG	1 cut(s)	824
EaeI	YGGCCR	2 cut(s)	798, 1103
Eam1104I	CTCTTC	1 cut(s)	989
EarI	CTCTTC	1 cut(s)	989
Eco130I	CCWWGG	1 cut(s)	1384
Eco147I	AGGCCT	1 cut(s)	1118
Eco47I	GGWCC	3 cut(s)	683, 786, 856
Eco47III	AGCGCT	1 cut(s)	1281
Eco57I	CTGAAG	1 cut(s)	1044
Eco72I	CACGTG	1 cut(s)	964
EcoNI	CCTNNNNNAGG	1 cut(s)	690
EcoRI	GAATTC	1 cut(s)	500
EcoRII	CCWGG	4 cut(s)	36, 53, 1118, 1324
EcoT14I	CCWWGG	1 cut(s)	1384
EgeI	GGCGCC	3 cut(s)	252, 659, 1421
EheI	GGCGCC	3 cut(s)	252, 659, 1421
ErhI	CCWWGG	1 cut(s)	1384
FaeI	CATG	4 cut(s)	16, 856, 994, 1702
FalI	AAGNNNNNCTT	4 cut(s)	798, 830, 1266, 1298
FaqI	GGGAC	1 cut(s)	796
FatI	CATG	4 cut(s)	12, 852, 990, 1698
FauI	CCCGC	2 cut(s)	881, 1153
FblI	GTMKAC	2 cut(s)	188, 239
Fnu4HI	GCNGC	7 cut(s)	314, 332, 638, 773, 935, 1013, 1300
FokI	GGATG	4 cut(s)	322, 1078, 1358, 1678
Fsp4HI	GCNGC	7 cut(s)	314, 332, 638, 773, 935, 1013, 1300
FspBI	CTAG	3 cut(s)	741, 1130, 1466
GlaI	GCGC	6 cut(s)	123, 252, 636, 659, 1281, 1421
GluI	GCNGC	7 cut(s)	314, 332, 638, 773, 935, 1013, 1300
GsaI	CCCAGC	1 cut(s)	117
GsuI	CTGGAG	3 cut(s)	37, 1052, 1308
HaeII	RGCGCY	4 cut(s)	254, 661, 1283, 1423
HaeIII	GGCC	3 cut(s)	800, 1105, 1118
HapII	CCGG	5 cut(s)	459, 468, 1303, 1411, 1471
HgaI	GACGC	9 cut(s)	281, 350, 408, 431, 479, 496, 629, 725, 1207
HhaI	GCGC	6 cut(s)	124, 253, 637, 660, 1282, 1422
Hin1I	GRCGYC	5 cut(s)	251, 273, 658, 1199, 1420
Hin1II	CATG	4 cut(s)	16, 856, 994, 1702
Hin6I	GCGC	6 cut(s)	122, 251, 635, 658, 1280, 1420
HinP1I	GCGC	6 cut(s)	122, 251, 635, 658, 1280, 1420
HincII	GTYRAC	4 cut(s)	189, 240, 1492, 1770
HindII	GTYRAC	4 cut(s)	189, 240, 1492, 1770
HindIII	AAGCTT	1 cut(s)	1001
HinfI	GANTC	9 cut(s)	4, 521, 613, 701, 809, 890, 1019, 1033, 1507
HpaI	GTTAAC	2 cut(s)	1492, 1770
HpaII	CCGG	5 cut(s)	459, 468, 1303, 1411, 1471
HphI	GGTGA	4 cut(s)	145, 707, 1519, 1597
Hpy166II	GTNNAC	9 cut(s)	189, 230, 240, 486, 973, 1223, 1336, 1492, 1770
Hpy188III	TCNNGA	6 cut(s)	511, 780, 806, 1069, 1337, 1466
Hpy8I	GTNNAC	9 cut(s)	189, 230, 240, 486, 973, 1223, 1336, 1492, 1770
Hpy99I	CGWCG	6 cut(s)	275, 366, 447, 495, 988, 1201
HpyAV	CCTTC	7 cut(s)	177, 266, 672, 1019, 1167, 1182, 1197
HpyCH4III	ACNGT	5 cut(s)	223, 683, 786, 1046, 1774
HpyCH4IV	ACGT	6 cut(s)	297, 651, 963, 1219, 1292, 1446
HpyF10VI	GCNNNNNNNGC	7 cut(s)	119, 313, 358, 439, 725, 1009, 1124
HpyF3I	CTNAG	6 cut(s)	127, 599, 604, 617, 821, 1679
HpySE526I	ACGT	6 cut(s)	297, 651, 963, 1219, 1292, 1446
Hsp92I	GRCGYC	5 cut(s)	251, 273, 658, 1199, 1420
Hsp92II	CATG	4 cut(s)	16, 856, 994, 1702
HspAI	GCGC	6 cut(s)	122, 251, 635, 658, 1280, 1420
KasI	GGCGCC	3 cut(s)	250, 657, 1419
KspAI	GTTAAC	2 cut(s)	1492, 1770
Kzo9I	GATC	3 cut(s)	927, 1088, 1458
LmnI	GCTCC	5 cut(s)	321, 744, 881, 1138, 1153
Lsp1109I	GCAGC	5 cut(s)	318, 759, 946, 999, 1311
LweI	GCATC	9 cut(s)	67, 300, 699, 1128, 1143, 1158, 1422, 1423, 1767
MaeI	CTAG	3 cut(s)	741, 1130, 1466
MaeII	ACGT	6 cut(s)	297, 651, 963, 1219, 1292, 1446
MaeIII	GTNAC	2 cut(s)	647, 1040
MalI	GATC	3 cut(s)	929, 1090, 1460
MbiI	CCGCTC	2 cut(s)	876, 1148
MboI	GATC	3 cut(s)	927, 1088, 1458
MboII	GAAGA	7 cut(s)	91, 94, 414, 666, 710, 1006, 1321
MfeI	CAATTG	1 cut(s)	1728
MflI	RGATCY	1 cut(s)	927
MhlI	GDGCHC	1 cut(s)	1580
MlsI	TGGCCA	1 cut(s)	1105
MluI	ACGCGT	4 cut(s)	336, 417, 440, 488
MluNI	TGGCCA	1 cut(s)	1105
Mly113I	GGCGCC	3 cut(s)	251, 658, 1420
MlyI	GAGTC	6 cut(s)	515, 622, 695, 818, 1028, 1501
MmeI	TCCRAC	3 cut(s)	549, 873, 1010
Mox20I	TGGCCA	1 cut(s)	1105
MscI	TGGCCA	1 cut(s)	1105
MseI	TTAA	5 cut(s)	939, 1491, 1551, 1749, 1769
MslI	CAYNNNNRTG	1 cut(s)	1583
Msp20I	TGGCCA	1 cut(s)	1105
MspCI	CTTAAG	1 cut(s)	938
MspI	CCGG	5 cut(s)	459, 468, 1303, 1411, 1471
MspR9I	CCNGG	6 cut(s)	38, 55, 1120, 1326, 1411, 1472
MunI	CAATTG	1 cut(s)	1728
Mva1269I	GAATGC	1 cut(s)	1129
MvaI	CCWGG	4 cut(s)	38, 55, 1120, 1326
MvnI	CGCG	6 cut(s)	338, 419, 442, 490, 640, 719
MwoI	GCNNNNNNNGC	7 cut(s)	119, 313, 358, 439, 725, 1009, 1124
NarI	GGCGCC	3 cut(s)	251, 658, 1420
NciI	CCSGG	2 cut(s)	1411, 1472
NdeII	GATC	3 cut(s)	927, 1088, 1458
NlaIII	CATG	4 cut(s)	16, 856, 994, 1702
NlaIV	GGNNCC	6 cut(s)	252, 317, 659, 746, 1076, 1421
NmeAIII	GCCGAG	1 cut(s)	459
NmuCI	GTSAC	1 cut(s)	1040
NspI	RCATGY	2 cut(s)	16, 1702
NspV	TTCGAA	1 cut(s)	101
OliI	CACNNNNGTG	1 cut(s)	1583
PceI	AGGCCT	1 cut(s)	1118
PciI	ACATGT	2 cut(s)	12, 1698
PctI	GAATGC	1 cut(s)	1129
PfeI	GAWTC	3 cut(s)	4, 890, 1033
PflMI	CCANNNNNTGG	1 cut(s)	1101
PfoI	TCCNGGA	1 cut(s)	1324
PkrI	GCNGC	7 cut(s)	315, 333, 639, 774, 936, 1014, 1301
PleI	GAGTC	6 cut(s)	515, 621, 695, 817, 1027, 1501
PluTI	GGCGCC	3 cut(s)	254, 661, 1423
PmaCI	CACGTG	1 cut(s)	964
PmlI	CACGTG	1 cut(s)	964
PpsI	GAGTC	6 cut(s)	515, 621, 695, 817, 1027, 1501
Ppu21I	YACGTR	4 cut(s)	298, 964, 1220, 1447
PscI	ACATGT	2 cut(s)	12, 1698
PshAI	GACNNNNGTC	1 cut(s)	184
PshBI	ATTAAT	1 cut(s)	1749
Psp6I	CCWGG	4 cut(s)	36, 53, 1118, 1324
PspCI	CACGTG	1 cut(s)	964
PspFI	CCCAGC	1 cut(s)	113
PspGI	CCWGG	4 cut(s)	36, 53, 1118, 1324
PspN4I	GGNNCC	6 cut(s)	252, 317, 659, 746, 1076, 1421
PspPI	GGNCC	3 cut(s)	683, 786, 856
PsrI	GAACNNNNNNTAC	2 cut(s)	1446, 1478
PsuI	RGATCY	1 cut(s)	927
RsaI	GTAC	3 cut(s)	50, 220, 944
RsaNI	GTAC	3 cut(s)	49, 219, 943
RseI	CAYNNNNRTG	1 cut(s)	1583
Rsr2I	CGGWCCG	1 cut(s)	786
RsrII	CGGWCCG	1 cut(s)	786
SalI	GTCGAC	2 cut(s)	187, 238
SaqAI	TTAA	5 cut(s)	939, 1491, 1551, 1749, 1769
SatI	GCNGC	7 cut(s)	314, 332, 638, 773, 935, 1013, 1300
Sau3AI	GATC	3 cut(s)	927, 1088, 1458
Sau96I	GGNCC	3 cut(s)	683, 786, 856
SchI	GAGTC	6 cut(s)	515, 622, 695, 818, 1028, 1501
ScrFI	CCNGG	6 cut(s)	38, 55, 1120, 1326, 1411, 1472
SduI	GDGCHC	1 cut(s)	1580
SfaNI	GCATC	9 cut(s)	67, 300, 699, 1128, 1143, 1158, 1422, 1423, 1767
SfoI	GGCGCC	3 cut(s)	252, 659, 1421
SfuI	TTCGAA	1 cut(s)	101
SinI	GGWCC	3 cut(s)	683, 786, 856
SmiMI	CAYNNNNRTG	1 cut(s)	1583
SmlI	CTYRAG	2 cut(s)	917, 938
SmoI	CTYRAG	2 cut(s)	917, 938
SseBI	AGGCCT	1 cut(s)	1118
SsiI	CCGC	7 cut(s)	307, 313, 638, 874, 1146, 1176, 1191
SspDI	GGCGCC	3 cut(s)	250, 657, 1419
SspMI	CTAG	3 cut(s)	741, 1130, 1466
StuI	AGGCCT	1 cut(s)	1118
StyD4I	CCNGG	6 cut(s)	36, 53, 1118, 1324, 1409, 1470
StyI	CCWWGG	1 cut(s)	1384
TaaI	ACNGT	5 cut(s)	223, 683, 786, 1046, 1774
TaiI	ACGT	6 cut(s)	300, 654, 966, 1222, 1295, 1449
TaqI	TCGA	9 cut(s)	101, 188, 239, 259, 519, 593, 983, 1087, 1196
TatI	WGTACW	1 cut(s)	48
TauI	GCSGC	2 cut(s)	316, 640
TfiI	GAWTC	3 cut(s)	4, 890, 1033
Tru1I	TTAA	5 cut(s)	939, 1491, 1551, 1749, 1769
Tru9I	TTAA	5 cut(s)	939, 1491, 1551, 1749, 1769
TscAI	CASTG	2 cut(s)	628, 836
TseFI	GTSAC	1 cut(s)	1040
TseI	GCWGC	5 cut(s)	331, 772, 934, 1012, 1299
Tsp45I	GTSAC	1 cut(s)	1040
TspDTI	ATGAA	4 cut(s)	17, 1007, 1674, 1677
TspGWI	ACGGA	1 cut(s)	694
TspRI	CASTG	2 cut(s)	628, 836
Van91I	CCANNNNNTGG	1 cut(s)	1101
Vha464I	CTTAAG	1 cut(s)	938
VpaK11BI	GGWCC	3 cut(s)	683, 786, 856
VspI	ATTAAT	1 cut(s)	1749
XagI	CCTNNNNNAGG	1 cut(s)	690
XapI	RAATTY	8 cut(s)	463, 500, 537, 1397, 1426, 1588, 1598, 1642
XbaI	TCTAGA	1 cut(s)	1465
XceI	RCATGY	2 cut(s)	16, 1702
XmiI	GTMKAC	2 cut(s)	188, 239
XspI	CTAG	3 cut(s)	741, 1130, 1466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.