Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0000120

Physical Location & Seq

Genomic Coordinates Forward (+)

9687831 .. 9690022

Gene Structure 2192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g13500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGACTCTTCGATCTTTGAATAAGCGAGCCAAACGGCTCTCTTCTGTCCATTCCCATCCCCTGTGCAGAAGGATAATAATATTATTTAGACATCTCTCACTACTCTCATTTCAAACCTCCACGCGTCTTCAACTTTGTCAGAGATATGAAAACCCGAGATTGTGTCTGAAGAGTGTTGATGAAATTTACGCAGGAAAATCCGGTGGTTGTGCACACTTTGAAGATTGCCCATCCGTGAAAATCGTCTCCGCTTTGAAAATGGCTAACCCATCTAACATTTGCTTAGATTTGAGTCTCAGCAGTGATCCGGTTGCGCCGCGTCAAGGTAATGTATGGTGCCCGTCTTTCTTATCTTCTAATGGTCCTCTTACAGGTGAAGACTCCGTGATGACGAATGCAACAACAGCTACGATAGTAGCTAGGAACCTCCTTACTCCCAAAGATAGTAGGCTGCTTTCAGGACGGTCCGATGAGTTGGCCGTTCAAGAGTCCCTCGCTCTCAGTGTTCAGTGTGCGGGCTCTGTGTCCAACATGGGCCAACGCCTGCTTGCTCGATCCCGTCAAGTGGAATCATTGATGGCAGAGGTGGAAAATCTTAAGCAAGAGATCAAACAGCTTAAGTATGAGAATAGAAGTTTGCATGTGCTTGCAAATAATTATTCGACGGGTATGAAGAGGAAGCTTGATGAGCTGCAAGAATCTGAAGGTCGAATTCAAAGTGACCGTCAAAGGCTTGCGGCTTATCTCCAAAGGCACCTTTTTCCTGGGTCATCTAGCGTTCCACCCAGTATTGAGGCCTCGAATGCTCTATCTTTGATGCCTTCCGCTCCGATGCCTCCTGCTCCGATGCCTTCCGCTCCGATGCCTCCTGCTCCGATGCCTTCCGCTCCGATGCCTTCCGCTTCTAGAGTTTTGCCACGTAGTAGGGCTTCACGTAAACAACCTTTTTATTTTTTTTATGAACATGTTTTGTTTTATTCAGTGTATTGGGTTGCCTCCCAATTAGCGCTTTCTTTTACGTCTTGCAGTCGGACGAAGAACCCAATCACTCCAGGATATAAAACAAGATTAAGAATCTGGAATAAAATAAAAACAAACGAAAATAAACAATCCAAGGGATTAACTCAAACGTCACCCAAAACACTCAAAACTTCCTTAAAAACACTTTCTGGGCAAAACTTGGAAACAAAACAGATTGGAACTTGTAATTTCTCGGAGATCGATCTAGAACATGCTTTGTTTTATTTGTACCCTGATTCGATCATCAATTTAAAACATTTACACAAGTGGATACCACAAAAGAAAAAGGCAATGCAAGAACCCCAAAAGAAAAGCAAAAGGCCAAAACCAAAAAAAAAAAAAAAAAAAGGGACTTTGCGTGACGTAGGTACATTTACGTCGCGCAAACCTATTTTGCGCGACGCAGTTGTACATACGTCGCGCAAAGTCTTTTTTTTTTTTAAAAAAAAAAAAACCGTTTTGCTTATAATTCAACGATCCAACCGTCAAACTTGTTTGTATATACTTGGAGATCTTATACGTCAAAAATCGCAAAAAACAAACATGCACAGATTAAGTAACGGGACAAACCTTTTCGACGGCTATAAACGAAAAATCACGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

542

Amino Acids

61.07

Weight (kDa)

10.23

Isoelectric Point (pI)

57.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000120)

Species	Orthologous Gene IDs
malus_domestica	MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica	Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis	pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1487
AccB1I	GGYRCC	2 cut(s)	336, 753
AccBSI	CCGCTC	3 cut(s)	827, 857, 887
AccII	CGCG	5 cut(s)	124, 319, 1402, 1419, 1441
AciI	CCGC	8 cut(s)	249, 317, 515, 737, 825, 855, 885, 900
AclWI	GGATC	3 cut(s)	299, 549, 1491
AcoI	YGGCCR	1 cut(s)	477
AcsI	RAATTY	2 cut(s)	183, 711
AcuI	CTGAAG	2 cut(s)	188, 723
AfaI	GTAC	3 cut(s)	1250, 1390, 1431
AfeI	AGCGCT	1 cut(s)	1008
AfiI	CCNNNNNNNGG	3 cut(s)	323, 371, 565
AflII	CTTAAG	2 cut(s)	596, 617
AflIII	ACRYGT	2 cut(s)	122, 964
AgsI	TTSAA	8 cut(s)	19, 113, 131, 221, 256, 485, 716, 1493
AjnI	CCWGG	2 cut(s)	763, 1051
AluBI	AGCT	5 cut(s)	407, 419, 616, 682, 691
AluI	AGCT	5 cut(s)	407, 419, 616, 682, 691
Alw21I	GWGCWC	1 cut(s)	214
Alw26I	GTCTC	2 cut(s)	250, 299
Alw44I	GTGCAC	1 cut(s)	210
AlwI	GGATC	3 cut(s)	299, 549, 1491
Ama87I	CYCGRG	1 cut(s)	154
Aor51HI	AGCGCT	1 cut(s)	1008
AoxI	GGCC	4 cut(s)	477, 535, 795, 1340
ApaLI	GTGCAC	1 cut(s)	210
ApeKI	GCWGC	2 cut(s)	451, 691
ApoI	RAATTY	2 cut(s)	183, 711
ArsI	GACNNNNNNTTYG	2 cut(s)	709, 741
AspLEI	GCGC	5 cut(s)	316, 1009, 1404, 1419, 1443
AspS9I	GGNCC	3 cut(s)	362, 465, 535
AsuHPI	GGTGA	2 cut(s)	386, 1125
AvaI	CYCGRG	1 cut(s)	154
AvaII	GGWCC	2 cut(s)	362, 465
BaeGI	GKGCMC	2 cut(s)	214, 341
BanI	GGYRCC	2 cut(s)	336, 753
BanII	GRGCYC	1 cut(s)	521
BarI	GAAGNNNNNNTAC	2 cut(s)	913, 945
BbsI	GAAGAC	2 cut(s)	119, 384
Bbv12I	GWGCWC	1 cut(s)	214
BbvI	GCAGC	2 cut(s)	438, 678
BccI	CCATC	4 cut(s)	63, 238, 277, 571
BceAI	ACGGC	3 cut(s)	50, 464, 1615
BciT130I	CCWGG	2 cut(s)	765, 1053
BciVI	GTATCC	1 cut(s)	1284
BcoDI	GTCTC	2 cut(s)	250, 299
BfaI	CTAG	4 cut(s)	420, 774, 906, 1226
BfoI	RGCGCY	1 cut(s)	1010
BfrI	CTTAAG	2 cut(s)	596, 617
BfuI	GTATCC	1 cut(s)	1284
BglII	AGATCT	1 cut(s)	1531
BisI	GCNGC	4 cut(s)	317, 452, 692, 738
BlsI	GCNGC	4 cut(s)	318, 453, 693, 739
Bme1390I	CCNGG	2 cut(s)	765, 1053
Bme18I	GGWCC	2 cut(s)	362, 465
BmeT110I	CYCGRG	1 cut(s)	154
BmgT120I	GGNCC	3 cut(s)	362, 465, 535
BmiI	GGNNCC	3 cut(s)	338, 425, 755
BmrFI	CCNGG	2 cut(s)	765, 1053
BmrI	ACTGGG	1 cut(s)	780
BmsI	GCATC	6 cut(s)	807, 822, 837, 852, 867, 882
BmuI	ACTGGG	1 cut(s)	780
BpiI	GAAGAC	2 cut(s)	119, 384
BpmI	CTGGAG	1 cut(s)	1035
Bsa29I	ATCGAT	1 cut(s)	1221
BsaAI	YACGTR	2 cut(s)	920, 935
BsaJI	CCNNGG	2 cut(s)	764, 1113
BsaWI	WCCGGW	2 cut(s)	200, 307
Bsc4I	CCNNNNNNNGG	3 cut(s)	323, 371, 565
Bse1I	ACTGG	1 cut(s)	786
Bse3DI	GCAATG	1 cut(s)	1317
BseBI	CCWGG	2 cut(s)	765, 1053
BseCI	ATCGAT	1 cut(s)	1221
BseDI	CCNNGG	2 cut(s)	764, 1113
BseGI	GGATG	2 cut(s)	55, 230
BseLI	CCNNNNNNNGG	3 cut(s)	323, 371, 565
BseMI	GCAATG	1 cut(s)	1317
BseMII	CTCAG	2 cut(s)	310, 514
BseNI	ACTGG	1 cut(s)	786
BseSI	GKGCMC	2 cut(s)	214, 341
BseXI	GCAGC	2 cut(s)	438, 678
BsgI	GTGCAG	1 cut(s)	85
Bsh1236I	CGCG	5 cut(s)	124, 319, 1402, 1419, 1441
BshFI	GGCC	4 cut(s)	479, 537, 797, 1342
BshNI	GGYRCC	2 cut(s)	336, 753
BshVI	ATCGAT	1 cut(s)	1221
BsiHKAI	GWGCWC	1 cut(s)	214
BsiHKCI	CYCGRG	1 cut(s)	154
BsiSI	CCGG	2 cut(s)	201, 308
BslFI	GGGAC	3 cut(s)	475, 1384, 1597
BslI	CCNNNNNNNGG	3 cut(s)	323, 371, 565
BsmAI	GTCTC	2 cut(s)	250, 299
BsmBI	CGTCTC	1 cut(s)	250
BsmFI	GGGAC	3 cut(s)	475, 1384, 1597
BsmI	GAATGC	2 cut(s)	400, 808
BsnI	GGCC	4 cut(s)	479, 537, 797, 1342
BsoBI	CYCGRG	1 cut(s)	154
Bsp1286I	GDGCHC	3 cut(s)	214, 341, 521
Bsp1407I	TGTACA	1 cut(s)	1429
Bsp143I	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
BspACI	CCGC	8 cut(s)	249, 317, 515, 737, 825, 855, 885, 900
BspANI	GGCC	4 cut(s)	479, 537, 797, 1342
BspCNI	CTCAG	2 cut(s)	309, 513
BspDI	ATCGAT	1 cut(s)	1221
BspFNI	CGCG	5 cut(s)	124, 319, 1402, 1419, 1441
BspLI	GGNNCC	3 cut(s)	338, 425, 755
BspPI	GGATC	3 cut(s)	299, 549, 1491
BspT107I	GGYRCC	2 cut(s)	336, 753
BspTI	CTTAAG	2 cut(s)	596, 617
BsrBI	CCGCTC	3 cut(s)	827, 857, 887
BsrDI	GCAATG	1 cut(s)	1317
BsrGI	TGTACA	1 cut(s)	1429
BsrI	ACTGG	1 cut(s)	786
BssECI	CCNNGG	2 cut(s)	764, 1113
BssMI	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
BssT1I	CCWWGG	1 cut(s)	1113
Bst2UI	CCWGG	2 cut(s)	765, 1053
Bst4CI	ACNGT	4 cut(s)	465, 725, 1477, 1505
Bst6I	CTCTTC	4 cut(s)	12, 46, 164, 668
BstAFI	CTTAAG	2 cut(s)	596, 617
BstAUI	TGTACA	1 cut(s)	1429
BstBAI	YACGTR	2 cut(s)	920, 935
BstC8I	GCNNGC	6 cut(s)	27, 517, 545, 549, 648, 735
BstDEI	CTNAG	3 cut(s)	283, 296, 500
BstENI	CCTNNNNNAGG	1 cut(s)	369
BstF5I	GGATG	2 cut(s)	55, 230
BstFNI	CGCG	5 cut(s)	124, 319, 1402, 1419, 1441
BstH2I	RGCGCY	1 cut(s)	1010
BstHHI	GCGC	5 cut(s)	316, 1009, 1404, 1419, 1443
BstKTI	GATC	9 cut(s)	14, 307, 557, 609, 1221, 1225, 1263, 1499, 1534
BstMAI	GTCTC	2 cut(s)	250, 299
BstMBI	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
BstMWI	GCNNNNNNNGC	3 cut(s)	404, 688, 803
BstNI	CCWGG	2 cut(s)	765, 1053
BstNSI	RCATGY	4 cut(s)	644, 968, 1235, 1567
BstSCI	CCNGG	2 cut(s)	763, 1051
BstSLI	GKGCMC	2 cut(s)	214, 341
BstUI	CGCG	5 cut(s)	124, 319, 1402, 1419, 1441
BstV1I	GCAGC	2 cut(s)	438, 678
BstV2I	GAAGAC	2 cut(s)	119, 384
BstX2I	RGATCY	1 cut(s)	1531
BstYI	RGATCY	1 cut(s)	1531
Bsu15I	ATCGAT	1 cut(s)	1221
BsuI	GTATCC	1 cut(s)	1284
BsuRI	GGCC	4 cut(s)	479, 537, 797, 1342
BsuTUI	ATCGAT	1 cut(s)	1221
BtsCI	GGATG	2 cut(s)	55, 230
BtsI	GCAGTG	1 cut(s)	307
BtsIMutI	CAGTG	4 cut(s)	307, 508, 515, 987
Cac8I	GCNNGC	6 cut(s)	27, 517, 545, 549, 648, 735
CfoI	GCGC	5 cut(s)	316, 1009, 1404, 1419, 1443
Cfr13I	GGNCC	3 cut(s)	362, 465, 535
ClaI	ATCGAT	1 cut(s)	1221
CpoI	CGGWCCG	1 cut(s)	465
CseI	GACGC	3 cut(s)	113, 308, 1430
Csp6I	GTAC	3 cut(s)	1249, 1389, 1430
CspI	CGGWCCG	1 cut(s)	465
CviAII	CATG	5 cut(s)	532, 641, 965, 1232, 1564
CviQI	GTAC	3 cut(s)	1249, 1389, 1430
DdeI	CTNAG	3 cut(s)	283, 296, 500
DpnI	GATC	9 cut(s)	13, 306, 556, 608, 1220, 1224, 1262, 1498, 1533
DpnII	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
DraI	TTTAAA	2 cut(s)	1272, 1462
EaeI	YGGCCR	1 cut(s)	477
Eam1104I	CTCTTC	4 cut(s)	12, 46, 164, 668
EarI	CTCTTC	4 cut(s)	12, 46, 164, 668
Eco130I	CCWWGG	1 cut(s)	1113
Eco147I	AGGCCT	1 cut(s)	797
Eco24I	GRGCYC	1 cut(s)	521
Eco47I	GGWCC	2 cut(s)	362, 465
Eco47III	AGCGCT	1 cut(s)	1008
Eco57I	CTGAAG	2 cut(s)	188, 723
Eco88I	CYCGRG	1 cut(s)	154
EcoNI	CCTNNNNNAGG	1 cut(s)	369
EcoRI	GAATTC	1 cut(s)	711
EcoRII	CCWGG	2 cut(s)	763, 1051
EcoT14I	CCWWGG	1 cut(s)	1113
EcoT38I	GRGCYC	1 cut(s)	521
ErhI	CCWWGG	1 cut(s)	1113
Esp3I	CGTCTC	1 cut(s)	250
FaeI	CATG	5 cut(s)	535, 644, 968, 1235, 1567
FaqI	GGGAC	3 cut(s)	475, 1384, 1597
FatI	CATG	5 cut(s)	531, 640, 964, 1231, 1563
FauI	CCCGC	1 cut(s)	508
Fnu4HI	GCNGC	4 cut(s)	317, 452, 692, 738
FokI	GGATG	2 cut(s)	42, 217
FriOI	GRGCYC	1 cut(s)	521
Fsp4HI	GCNGC	4 cut(s)	317, 452, 692, 738
FspBI	CTAG	4 cut(s)	420, 774, 906, 1226
GlaI	GCGC	5 cut(s)	315, 1008, 1403, 1418, 1442
GluI	GCNGC	4 cut(s)	317, 452, 692, 738
GsuI	CTGGAG	1 cut(s)	1035
HaeII	RGCGCY	1 cut(s)	1010
HaeIII	GGCC	4 cut(s)	479, 537, 797, 1342
HapII	CCGG	2 cut(s)	201, 308
HgaI	GACGC	3 cut(s)	113, 308, 1430
HhaI	GCGC	5 cut(s)	316, 1009, 1404, 1419, 1443
Hin1II	CATG	5 cut(s)	535, 644, 968, 1235, 1567
Hin6I	GCGC	5 cut(s)	314, 1007, 1402, 1417, 1441
HinP1I	GCGC	5 cut(s)	314, 1007, 1402, 1417, 1441
HindIII	AAGCTT	1 cut(s)	680
HinfI	GANTC	8 cut(s)	4, 292, 380, 488, 569, 698, 1074, 1256
HpaII	CCGG	2 cut(s)	201, 308
HphI	GGTGA	2 cut(s)	386, 1125
Hpy166II	GTNNAC	2 cut(s)	212, 938
Hpy188III	TCNNGA	6 cut(s)	459, 485, 906, 1078, 1226, 1618
Hpy8I	GTNNAC	2 cut(s)	212, 938
Hpy99I	CGWCG	5 cut(s)	667, 1402, 1424, 1441, 1601
HpyAV	CCTTC	6 cut(s)	63, 698, 831, 861, 891, 906
HpyCH4III	ACNGT	4 cut(s)	465, 725, 1477, 1505
HpyCH4IV	ACGT	8 cut(s)	919, 934, 1019, 1130, 1383, 1397, 1436, 1540
HpyCH4V	TGCA	9 cut(s)	66, 212, 398, 640, 650, 694, 1026, 1315, 1567
HpyF10VI	GCNNNNNNNGC	3 cut(s)	404, 688, 803
HpyF3I	CTNAG	3 cut(s)	283, 296, 500
HpySE526I	ACGT	8 cut(s)	919, 934, 1019, 1130, 1383, 1397, 1436, 1540
Hsp92II	CATG	5 cut(s)	535, 644, 968, 1235, 1567
HspAI	GCGC	5 cut(s)	314, 1007, 1402, 1417, 1441
Kzo9I	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
LmnI	GCTCC	5 cut(s)	832, 847, 862, 877, 892
Lsp1109I	GCAGC	2 cut(s)	438, 678
LweI	GCATC	6 cut(s)	807, 822, 837, 852, 867, 882
MaeI	CTAG	4 cut(s)	420, 774, 906, 1226
MaeII	ACGT	8 cut(s)	919, 934, 1019, 1130, 1383, 1397, 1436, 1540
MaeIII	GTNAC	4 cut(s)	719, 1131, 1379, 1577
MalI	GATC	9 cut(s)	13, 306, 556, 608, 1220, 1224, 1262, 1498, 1533
MbiI	CCGCTC	3 cut(s)	827, 857, 887
MboI	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
MboII	GAAGA	8 cut(s)	33, 119, 181, 233, 345, 389, 685, 1048
MflI	RGATCY	1 cut(s)	1531
MhlI	GDGCHC	3 cut(s)	214, 341, 521
MluCI	AATT	7 cut(s)	183, 655, 711, 1001, 1207, 1267, 1488
MluI	ACGCGT	1 cut(s)	122
MlyI	GAGTC	3 cut(s)	301, 374, 497
MmeI	TCCRAC	3 cut(s)	552, 1010, 1524
MseI	TTAA	9 cut(s)	597, 618, 1070, 1121, 1157, 1271, 1461, 1574, 1624
MspCI	CTTAAG	2 cut(s)	596, 617
MspI	CCGG	2 cut(s)	201, 308
MspR9I	CCNGG	2 cut(s)	765, 1053
Mva1269I	GAATGC	2 cut(s)	400, 808
MvaI	CCWGG	2 cut(s)	765, 1053
MvnI	CGCG	5 cut(s)	124, 319, 1402, 1419, 1441
MwoI	GCNNNNNNNGC	3 cut(s)	404, 688, 803
NdeII	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
NlaIII	CATG	5 cut(s)	535, 644, 968, 1235, 1567
NlaIV	GGNNCC	3 cut(s)	338, 425, 755
NmuCI	GTSAC	3 cut(s)	719, 1131, 1379
NspI	RCATGY	4 cut(s)	644, 968, 1235, 1567
PceI	AGGCCT	1 cut(s)	797
PciI	ACATGT	1 cut(s)	964
PcsI	WCGNNNNNNNCGW	1 cut(s)	1501
PctI	GAATGC	2 cut(s)	400, 808
PfeI	GAWTC	4 cut(s)	569, 698, 1074, 1256
PfoI	TCCNGGA	1 cut(s)	1051
PkrI	GCNGC	4 cut(s)	318, 453, 693, 739
PleI	GAGTC	3 cut(s)	300, 374, 496
PpsI	GAGTC	3 cut(s)	300, 374, 496
Ppu21I	YACGTR	2 cut(s)	920, 935
PscI	ACATGT	1 cut(s)	964
PsiI	TTATAA	1 cut(s)	1487
Psp6I	CCWGG	2 cut(s)	763, 1051
PspGI	CCWGG	2 cut(s)	763, 1051
PspN4I	GGNNCC	3 cut(s)	338, 425, 755
PspPI	GGNCC	3 cut(s)	362, 465, 535
PsuI	RGATCY	1 cut(s)	1531
RsaI	GTAC	3 cut(s)	1250, 1390, 1431
RsaNI	GTAC	3 cut(s)	1249, 1389, 1430
Rsr2I	CGGWCCG	1 cut(s)	465
RsrII	CGGWCCG	1 cut(s)	465
SaqAI	TTAA	9 cut(s)	597, 618, 1070, 1121, 1157, 1271, 1461, 1574, 1624
SatI	GCNGC	4 cut(s)	317, 452, 692, 738
Sau3AI	GATC	9 cut(s)	11, 304, 554, 606, 1218, 1222, 1260, 1496, 1531
Sau96I	GGNCC	3 cut(s)	362, 465, 535
SchI	GAGTC	3 cut(s)	301, 374, 497
ScrFI	CCNGG	2 cut(s)	765, 1053
SduI	GDGCHC	3 cut(s)	214, 341, 521
SfaNI	GCATC	6 cut(s)	807, 822, 837, 852, 867, 882
SinI	GGWCC	2 cut(s)	362, 465
SmlI	CTYRAG	2 cut(s)	596, 617
SmoI	CTYRAG	2 cut(s)	596, 617
Sse9I	AATT	7 cut(s)	183, 655, 711, 1001, 1207, 1267, 1488
SseBI	AGGCCT	1 cut(s)	797
SsiI	CCGC	8 cut(s)	249, 317, 515, 737, 825, 855, 885, 900
SspI	AATATT	1 cut(s)	81
SspMI	CTAG	4 cut(s)	420, 774, 906, 1226
StuI	AGGCCT	1 cut(s)	797
StyD4I	CCNGG	2 cut(s)	763, 1051
StyI	CCWWGG	1 cut(s)	1113
TaaI	ACNGT	4 cut(s)	465, 725, 1477, 1505
TaiI	ACGT	8 cut(s)	922, 937, 1022, 1133, 1386, 1400, 1439, 1543
TaqI	TCGA	8 cut(s)	10, 553, 662, 709, 800, 1221, 1259, 1596
TasI	AATT	7 cut(s)	183, 655, 711, 1001, 1207, 1267, 1488
TatI	WGTACW	1 cut(s)	1429
TauI	GCSGC	2 cut(s)	319, 740
TfiI	GAWTC	4 cut(s)	569, 698, 1074, 1256
Tru1I	TTAA	9 cut(s)	597, 618, 1070, 1121, 1157, 1271, 1461, 1574, 1624
Tru9I	TTAA	9 cut(s)	597, 618, 1070, 1121, 1157, 1271, 1461, 1574, 1624
TscAI	CASTG	4 cut(s)	307, 508, 515, 987
TseFI	GTSAC	3 cut(s)	719, 1131, 1379
TseI	GCWGC	2 cut(s)	451, 691
Tsp45I	GTSAC	3 cut(s)	719, 1131, 1379
TspDTI	ATGAA	4 cut(s)	162, 195, 686, 975
TspGWI	ACGGA	2 cut(s)	223, 373
TspRI	CASTG	4 cut(s)	307, 508, 515, 987
Vha464I	CTTAAG	2 cut(s)	596, 617
VneI	GTGCAC	1 cut(s)	210
VpaK11BI	GGWCC	2 cut(s)	362, 465
XagI	CCTNNNNNAGG	1 cut(s)	369
XapI	RAATTY	2 cut(s)	183, 711
XbaI	TCTAGA	2 cut(s)	905, 1225
XceI	RCATGY	4 cut(s)	644, 968, 1235, 1567
XspI	CTAG	4 cut(s)	420, 774, 906, 1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.