transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 243 |
| Acc36I | ACCTGC | 1 cut(s) | 528 |
| AccB1I | GGYRCC | 1 cut(s) | 844 |
| AciI | CCGC | 1 cut(s) | 359 |
| AclWI | GGATC | 1 cut(s) | 336 |
| AcoI | YGGCCR | 1 cut(s) | 711 |
| AcsI | RAATTY | 7 cut(s) | 220, 547, 611, 620, 668, 799, 857 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 425, 595 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 211, 243, 330, 362 |
| AluBI | AGCT | 2 cut(s) | 34, 253 |
| AluI | AGCT | 2 cut(s) | 34, 253 |
| Alw26I | GTCTC | 1 cut(s) | 638 |
| AlwI | GGATC | 1 cut(s) | 336 |
| AoxI | GGCC | 1 cut(s) | 711 |
| ApeKI | GCWGC | 1 cut(s) | 184 |
| ApoI | RAATTY | 7 cut(s) | 220, 547, 611, 620, 668, 799, 857 |
| AseI | ATTAAT | 1 cut(s) | 263 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 588 |
| AspS9I | GGNCC | 2 cut(s) | 45, 904 |
| AsuHPI | GGTGA | 1 cut(s) | 881 |
| AvaII | GGWCC | 2 cut(s) | 45, 904 |
| BalI | TGGCCA | 1 cut(s) | 713 |
| BanI | GGYRCC | 1 cut(s) | 844 |
| BanII | GRGCYC | 1 cut(s) | 284 |
| BbsI | GAAGAC | 2 cut(s) | 321, 591 |
| BbvI | GCAGC | 1 cut(s) | 196 |
| BccI | CCATC | 2 cut(s) | 478, 704 |
| BceAI | ACGGC | 1 cut(s) | 902 |
| BclI | TGATCA | 1 cut(s) | 127 |
| BcoDI | GTCTC | 1 cut(s) | 638 |
| BfaI | CTAG | 1 cut(s) | 399 |
| BfuAI | ACCTGC | 1 cut(s) | 528 |
| BisI | GCNGC | 1 cut(s) | 185 |
| BlsI | GCNGC | 1 cut(s) | 186 |
| Bme18I | GGWCC | 2 cut(s) | 45, 904 |
| BmgT120I | GGNCC | 2 cut(s) | 45, 904 |
| BmiI | GGNNCC | 3 cut(s) | 47, 153, 846 |
| BpiI | GAAGAC | 2 cut(s) | 321, 591 |
| BpuEI | CTTGAG | 1 cut(s) | 662 |
| BsaBI | GATNNNNATC | 1 cut(s) | 243 |
| BsaJI | CCNNGG | 2 cut(s) | 385, 552 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 425, 595 |
| Bse118I | RCCGGY | 1 cut(s) | 871 |
| Bse8I | GATNNNNATC | 1 cut(s) | 243 |
| BseDI | CCNNGG | 2 cut(s) | 385, 552 |
| BseJI | GATNNNNATC | 1 cut(s) | 243 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 425, 595 |
| BseXI | GCAGC | 1 cut(s) | 196 |
| BsgI | GTGCAG | 1 cut(s) | 296 |
| BshFI | GGCC | 1 cut(s) | 713 |
| BshNI | GGYRCC | 1 cut(s) | 844 |
| BsiSI | CCGG | 2 cut(s) | 446, 872 |
| BslFI | GGGAC | 1 cut(s) | 31 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 425, 595 |
| BsmAI | GTCTC | 1 cut(s) | 638 |
| BsmFI | GGGAC | 1 cut(s) | 31 |
| BsnI | GGCC | 1 cut(s) | 713 |
| Bsp1286I | GDGCHC | 1 cut(s) | 284 |
| Bsp143I | GATC | 2 cut(s) | 127, 328 |
| BspACI | CCGC | 1 cut(s) | 359 |
| BspANI | GGCC | 1 cut(s) | 713 |
| BspHI | TCATGA | 2 cut(s) | 543, 616 |
| BspLI | GGNNCC | 3 cut(s) | 47, 153, 846 |
| BspMI | ACCTGC | 1 cut(s) | 528 |
| BspPI | GGATC | 1 cut(s) | 336 |
| BspT107I | GGYRCC | 1 cut(s) | 844 |
| BsrFI | RCCGGY | 1 cut(s) | 871 |
| BssAI | RCCGGY | 1 cut(s) | 871 |
| BssECI | CCNNGG | 2 cut(s) | 385, 552 |
| BssMI | GATC | 2 cut(s) | 127, 328 |
| BssT1I | CCWWGG | 2 cut(s) | 385, 552 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 458 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 593 |
| BstKTI | GATC | 2 cut(s) | 130, 331 |
| BstMAI | GTCTC | 1 cut(s) | 638 |
| BstMBI | GATC | 2 cut(s) | 127, 328 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 349, 387, 458 |
| BstNSI | RCATGY | 1 cut(s) | 705 |
| BstV1I | GCAGC | 1 cut(s) | 196 |
| BstV2I | GAAGAC | 2 cut(s) | 321, 591 |
| BsuRI | GGCC | 1 cut(s) | 713 |
| BveI | ACCTGC | 1 cut(s) | 528 |
| CciI | TCATGA | 2 cut(s) | 543, 616 |
| Cfr10I | RCCGGY | 1 cut(s) | 871 |
| Cfr13I | GGNCC | 2 cut(s) | 45, 904 |
| CviAII | CATG | 5 cut(s) | 37, 544, 617, 702, 914 |
| CviJI | RGCY | 6 cut(s) | 34, 187, 253, 282, 305, 713 |
| CviKI_1 | RGCY | 6 cut(s) | 34, 187, 253, 282, 305, 713 |
| DpnI | GATC | 2 cut(s) | 129, 330 |
| DpnII | GATC | 2 cut(s) | 127, 328 |
| EaeI | YGGCCR | 1 cut(s) | 711 |
| Eco130I | CCWWGG | 2 cut(s) | 385, 552 |
| Eco24I | GRGCYC | 1 cut(s) | 284 |
| Eco47I | GGWCC | 2 cut(s) | 45, 904 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 593 |
| EcoO109I | RGGNCCY | 1 cut(s) | 45 |
| EcoRI | GAATTC | 3 cut(s) | 547, 620, 857 |
| EcoT14I | CCWWGG | 2 cut(s) | 385, 552 |
| EcoT38I | GRGCYC | 1 cut(s) | 284 |
| ErhI | CCWWGG | 2 cut(s) | 385, 552 |
| FaeI | CATG | 5 cut(s) | 40, 547, 620, 705, 917 |
| FaqI | GGGAC | 1 cut(s) | 31 |
| FatI | CATG | 5 cut(s) | 36, 543, 616, 701, 913 |
| FbaI | TGATCA | 1 cut(s) | 127 |
| Fnu4HI | GCNGC | 1 cut(s) | 185 |
| FriOI | GRGCYC | 1 cut(s) | 284 |
| Fsp4HI | GCNGC | 1 cut(s) | 185 |
| FspBI | CTAG | 1 cut(s) | 399 |
| GluI | GCNGC | 1 cut(s) | 185 |
| HaeIII | GGCC | 1 cut(s) | 713 |
| HapII | CCGG | 2 cut(s) | 446, 872 |
| Hin1II | CATG | 5 cut(s) | 40, 547, 620, 705, 917 |
| HindIII | AAGCTT | 1 cut(s) | 251 |
| HinfI | GANTC | 1 cut(s) | 838 |
| HpaII | CCGG | 2 cut(s) | 446, 872 |
| HphI | GGTGA | 1 cut(s) | 881 |
| Hpy166II | GTNNAC | 1 cut(s) | 877 |
| Hpy188I | TCNGA | 3 cut(s) | 118, 420, 772 |
| Hpy188III | TCNNGA | 3 cut(s) | 293, 544, 617 |
| Hpy8I | GTNNAC | 1 cut(s) | 877 |
| HpyAV | CCTTC | 3 cut(s) | 415, 599, 902 |
| HpyCH4IV | ACGT | 1 cut(s) | 93 |
| HpyCH4V | TGCA | 5 cut(s) | 55, 277, 537, 601, 705 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 349, 387, 458 |
| HpySE526I | ACGT | 1 cut(s) | 93 |
| Hsp92II | CATG | 5 cut(s) | 40, 547, 620, 705, 917 |
| Ksp22I | TGATCA | 1 cut(s) | 127 |
| Kzo9I | GATC | 2 cut(s) | 127, 328 |
| LmnI | GCTCC | 1 cut(s) | 466 |
| LpnPI | CCDG | 7 cut(s) | 263, 459, 523, 695, 741, 827, 885 |
| Lsp1109I | GCAGC | 1 cut(s) | 196 |
| MaeI | CTAG | 1 cut(s) | 399 |
| MaeII | ACGT | 1 cut(s) | 93 |
| MaeIII | GTNAC | 1 cut(s) | 27 |
| MalI | GATC | 2 cut(s) | 129, 330 |
| MboI | GATC | 2 cut(s) | 127, 328 |
| MboII | GAAGA | 5 cut(s) | 68, 326, 569, 572, 596 |
| MhlI | GDGCHC | 1 cut(s) | 284 |
| MlsI | TGGCCA | 1 cut(s) | 713 |
| MluNI | TGGCCA | 1 cut(s) | 713 |
| MmeI | TCCRAC | 1 cut(s) | 306 |
| MnlI | CCTC | 5 cut(s) | 165, 167, 207, 295, 419 |
| Mox20I | TGGCCA | 1 cut(s) | 713 |
| MroXI | GAANNNNTTC | 1 cut(s) | 588 |
| MscI | TGGCCA | 1 cut(s) | 713 |
| MseI | TTAA | 4 cut(s) | 72, 224, 255, 263 |
| Msp20I | TGGCCA | 1 cut(s) | 713 |
| MspI | CCGG | 2 cut(s) | 446, 872 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 349, 387, 458 |
| NdeII | GATC | 2 cut(s) | 127, 328 |
| NlaIII | CATG | 5 cut(s) | 40, 547, 620, 705, 917 |
| NlaIV | GGNNCC | 3 cut(s) | 47, 153, 846 |
| NmuCI | GTSAC | 1 cut(s) | 27 |
| NspI | RCATGY | 1 cut(s) | 705 |
| PagI | TCATGA | 2 cut(s) | 543, 616 |
| PdmI | GAANNNNTTC | 1 cut(s) | 588 |
| PfeI | GAWTC | 1 cut(s) | 838 |
| PkrI | GCNGC | 1 cut(s) | 186 |
| PpuMI | RGGWCCY | 1 cut(s) | 45 |
| PshBI | ATTAAT | 1 cut(s) | 263 |
| PsiI | TTATAA | 1 cut(s) | 243 |
| Psp5II | RGGWCCY | 1 cut(s) | 45 |
| PspN4I | GGNNCC | 3 cut(s) | 47, 153, 846 |
| PspPI | GGNCC | 2 cut(s) | 45, 904 |
| PspPPI | RGGWCCY | 1 cut(s) | 45 |
| SaqAI | TTAA | 4 cut(s) | 72, 224, 255, 263 |
| SatI | GCNGC | 1 cut(s) | 185 |
| Sau3AI | GATC | 2 cut(s) | 127, 328 |
| Sau96I | GGNCC | 2 cut(s) | 45, 904 |
| SduI | GDGCHC | 1 cut(s) | 284 |
| SinI | GGWCC | 2 cut(s) | 45, 904 |
| SmlI | CTYRAG | 1 cut(s) | 641 |
| SmoI | CTYRAG | 1 cut(s) | 641 |
| SsiI | CCGC | 1 cut(s) | 359 |
| SspMI | CTAG | 1 cut(s) | 399 |
| StyI | CCWWGG | 2 cut(s) | 385, 552 |
| TaiI | ACGT | 1 cut(s) | 96 |
| TaqI | TCGA | 1 cut(s) | 307 |
| TfiI | GAWTC | 1 cut(s) | 838 |
| Tru1I | TTAA | 4 cut(s) | 72, 224, 255, 263 |
| Tru9I | TTAA | 4 cut(s) | 72, 224, 255, 263 |
| TseFI | GTSAC | 1 cut(s) | 27 |
| TseI | GCWGC | 1 cut(s) | 184 |
| Tsp45I | GTSAC | 1 cut(s) | 27 |
| TspDTI | ATGAA | 6 cut(s) | 532, 560, 605, 613, 633, 851 |
| VpaK11BI | GGWCC | 2 cut(s) | 45, 904 |
| VspI | ATTAAT | 1 cut(s) | 263 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 593 |
| XapI | RAATTY | 7 cut(s) | 220, 547, 611, 620, 668, 799, 857 |
| XceI | RCATGY | 1 cut(s) | 705 |
| XmnI | GAANNNNTTC | 1 cut(s) | 588 |
| XspI | CTAG | 1 cut(s) | 399 |