Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0000120

Physical Location & Seq

Genomic Coordinates Forward (+)

24171768 .. 24175250

Gene Structure 3483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g28230.21

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGTGCCGTGTTGTGATTGGCCTCCTGGTTGGAGGAAAAGTCTTGTGGGTCCTTGACGGTACGCTGTTGACTGGTGCTTTGTATTCCCGAGTAAGGGAAGCTCCTCGGTTGGGGACTTTACCGAAGTGTGGTGTCGCCTTCACTTGCCTTCTTTGTCTTGTAAGTAGATGTGACATCTTTTCTTGGAAGTACTTTTCCTTCATCCAGGAGTGGTATATTTACTTACTTGTAGTTTCGGGTTTGGTCAAGTTCGATACAAACCATATAGTACGAGTCCCCCAAGTCTCTAAGCGAGAAGATCTGCCAAAGGAGGTGACAGACAAGGTTGATCTTGGGTTTTGGCTGATTGTACTCATTCTCCCTATCTCTCATTCAATGAGGTACTCTTGTTTTTGGAGAAAACAGACGAATTGGCACGTGCTTTGTTGGTTTTCTGGTTTCCTCCAAAAGAGCGAGCCGACTCCAGAATTTGAGGGTCAAAACAAGTCCGTCAGACCTAGAGTATGCTCTAGGATGATCCTGATGATATGGGATACTTTTGCTCAAAAGGCTGTTGAGGCTTCTCGATCTCTTCAATTAGACAGAAATGGTGCGCAACCTTTGCATTTAAATGGTCCTTCAGAGCACTACTTCTCAATGACTCATCCATGCTTGGCATTGCCGAAGGAATTCATGACCTTGACAACAGTTGAGGATGAGTACTCGAGAGCAATGCTAGGCAAGCGACAAGGCAAAGGTTCCGGGCAATCAGTTCTAGATCGGAAGTTTGATTTCAGGAAAAGACAGGGAAAAAGCATGATATGGGATACTCTTACTTTCAACCCTGATGATATGAGATATTCTTGCTCTGATGTGTATTTCGAGAGGCTAGATTGGGAGTGCCATTTCGGATGTGAGGAAGGGTTGAGCATTTTTTTTTATTTGGCAGGTCTGCCTGGCTGTGGAGGATGGAGGTCGACATATATAGGAATTGTCCCAACAGCGAGTGGTAATGCTGTTCCTTTACCCTTCTTGGTCAAAGCAATGTACACTTTGAAAAAGTGGTCTGTGGTATCCAGAAAGCTGATGTTGCGTGTGAGAATTGTGGACAAATTTTATCCAATGAAATCCGACTTCTCGAAGTTTGGGGAGCGGGTTCTCGAGATTCGGAGAGCGGTGCTTCTTCGATTTCTAGGCAAGCAATCCTGTTGGGAGTGTTTTCTCAGATGTGAAGAAAGGTTGGGCATTTTTGCAAGTCAGCTTTGCCACGGATGGTGCTATTCCTTTATCCTTGTGGGTAATAGTAGGGTAACTGGGCCTTCAACATTTACCTGTCTTAACTTTGTCAGAGTTCTTTGGCAAATGCTAATAAATTTTAACCCAGGAAATCCGCTTCTCGAAATTTGGAGAGTACTGGCTCTTTCTTTTATAGGAGCAGAATTTTTCCCTTATCTTCATACTTCTGAGACTTACTGTACTTCATTTTTTTCTTCATCTTTTCTGAGAATGTCTGGCCCCTCCGACTGTCGTTTGGATTTGAATGTTGTAGAAGAGGTAGCCATATCTCCTCAAGATAACATATGGCGCCCATCTTTCTTATCTCCCATTGGTCCCCTTATTATTGGGGACTCTGTGATGAAGAATGATATGACCGCTGCGGTGGTGGCCAAGAATCTTCTTACTCCCAAAGACAACAGAGTACTTTCCAAACGGTCCGATGAGTTGGCTTTTAAGGATTCTCTCACTTTTAGTGTTCAATGTGCAGGTTCTGTGTCTAATATGGCCCAACGTCTATTTGCTCGAACCCGCCAAGTTGAATCGTTGGCGGCTGAAGTGATAAGTCTCAAACAGGAGATCGGAGGGCTTAAGCACGAGAATAAACAGTTGCACACGCTCTTACAGGAATCCGAGGGTCAGATTTTAAATGATCATCAAAGGTTTGTGAGTTTGTTCGAAAGGCATTTGTTGCCTTCGTCCTCTGGGCCTGTACCATATACTGAAGCTCCAAATGATCAACCTCTAGTGCCTCCTCTTTCTGGGGTTCTGCCCAGTACTGAGGCTCCAAATAATCACCCTCCGGTGCCTCCTATTTCTGGGACTTTGCCGAGTGTTGAGACTTCTCCTGATCATGTGTATACACGTATTTGTAATTTATCGAAGATATCAATAAATAAGTTTTACTTCATTCAACGTGTTGTGTTAAATACACTAAGGTATCATTCACTAAGTTCTTTGAATTTTTTCTGTTGCTCATCGATTTCATACAATCTCCTTGAAGAAGACATTTTTGAGTTTTTTGTAAGAATTAAGATGGATGTAGGGTTTATATGTACAAAAAAAAAAAAAAAAAGGATGAGGTTCTGGATAATGCCACGTGGCACTAGGGCTGGGCACGGGCCAACCAGGCCTAATTTTGAAGGGACCGGACCAGACTCGGGTTTAAAAGAGATGGGTCGAGCTAGGCAGGGGACATTTTCTAATATAGGAATCGGACCAAACCCGGCTTGGTACGGGTCCACGGGTCCTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAAAAAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009787 GO:0009789 GO:0009873 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010118 GO:0010185 GO:0010186 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032870 GO:0035556 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0080090 GO:0080134 GO:0090332 GO:0097159 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:1905957 GO:1905959 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

860

Amino Acids

98.09

Weight (kDa)

9.15

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000120)

Species	Orthologous Gene IDs
malus_domestica	MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica	Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis	pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	594
Acc36I	ACCTGC	2 cut(s)	917, 1733
AccB1I	GGYRCC	2 cut(s)	1563, 2059
AccBSI	CCGCTC	2 cut(s)	1132, 1154
AccI	GTMKAC	2 cut(s)	956, 2114
AciI	CCGC	7 cut(s)	1132, 1154, 1370, 1632, 1637, 1786, 1805
AclWI	GGATC	1 cut(s)	511
AcoI	YGGCCR	1 cut(s)	1644
AcsI	RAATTY	7 cut(s)	467, 668, 1091, 1351, 1380, 1418, 2215
AcuI	CTGAAG	3 cut(s)	603, 1830, 1998
AcvI	CACGTG	2 cut(s)	418, 2354
AcyI	GRCGYC	1 cut(s)	1564
AfiI	CCNNNNNNNGG	8 cut(s)	93, 94, 110, 128, 941, 2015, 2072, 2414
AflII	CTTAAG	1 cut(s)	1844
AflIII	ACRYGT	2 cut(s)	2117, 2170
AjnI	CCWGG	5 cut(s)	24, 204, 934, 1360, 2381
AluBI	AGCT	5 cut(s)	101, 1063, 1240, 1982, 2438
AluI	AGCT	5 cut(s)	101, 1063, 1240, 1982, 2438
Alw21I	GWGCWC	1 cut(s)	627
Alw26I	GTCTC	4 cut(s)	289, 1439, 1826, 2087
AlwI	GGATC	1 cut(s)	511
AlwNI	CAGNNNCTG	1 cut(s)	1748
Ama87I	CYCGRG	4 cut(s)	87, 703, 1139, 2413
AoxI	GGCC	8 cut(s)	19, 1295, 1492, 1644, 1761, 1961, 2375, 2384
ApeKI	GCWGC	1 cut(s)	1634
ApoI	RAATTY	7 cut(s)	467, 668, 1091, 1351, 1380, 1418, 2215
ArsI	GACNNNNNNTTYG	2 cut(s)	61, 93
Asp700I	GAANNNNTTC	2 cut(s)	668, 2219
AspLEI	GCGC	2 cut(s)	595, 1566
AsuC2I	CCSGG	2 cut(s)	742, 2480
AsuHPI	GGTGA	2 cut(s)	325, 2042
AsuII	TTCGAA	1 cut(s)	1932
AvaI	CYCGRG	4 cut(s)	87, 703, 1139, 2413
AvaII	GGWCC	9 cut(s)	49, 614, 1589, 1692, 2400, 2405, 2471, 2493, 2501
BaeGI	GKGCMC	1 cut(s)	2373
BaeI	ACNNNNGTAYC	4 cut(s)	373, 406, 2177, 2210
BalI	TGGCCA	1 cut(s)	1646
BanI	GGYRCC	2 cut(s)	1563, 2059
BarI	GAAGNNNNNNTAC	2 cut(s)	182, 214
BauI	CACGAG	1 cut(s)	1850
BbrPI	CACGTG	2 cut(s)	418, 2354
BbsI	GAAGAC	1 cut(s)	2265
Bbv12I	GWGCWC	1 cut(s)	627
BbvI	GCAGC	1 cut(s)	1621
BccI	CCATC	5 cut(s)	942, 1245, 1576, 2284, 2422
BcgI	CGANNNNNNTGC	2 cut(s)	694, 728
BciT130I	CCWGG	5 cut(s)	26, 206, 936, 1362, 2383
BciVI	GTATCC	3 cut(s)	526, 799, 1063
BclI	TGATCA	3 cut(s)	1906, 1990, 2104
BcnI	CCSGG	2 cut(s)	742, 2480
BcoDI	GTCTC	4 cut(s)	289, 1439, 1826, 2087
BfaI	CTAG	9 cut(s)	498, 510, 716, 755, 869, 1172, 2000, 2361, 2439
BfoI	RGCGCY	1 cut(s)	1567
BfrI	CTTAAG	1 cut(s)	1844
BfuAI	ACCTGC	2 cut(s)	917, 1733
BfuI	GTATCC	3 cut(s)	526, 799, 1063
BglI	GCCNNNNNGGC	1 cut(s)	2383
BglII	AGATCT	1 cut(s)	298
BisI	GCNGC	2 cut(s)	1635, 1806
BlsI	GCNGC	2 cut(s)	1636, 1807
BmcAI	AGTACT	5 cut(s)	191, 701, 1392, 1680, 2032
Bme1390I	CCNGG	7 cut(s)	26, 206, 742, 936, 1362, 2383, 2480
Bme18I	GGWCC	9 cut(s)	49, 614, 1589, 1692, 2400, 2405, 2471, 2493, 2501
BmeT110I	CYCGRG	4 cut(s)	87, 703, 1139, 2413
BmrFI	CCNGG	7 cut(s)	26, 206, 742, 936, 1362, 2383, 2480
BmrI	ACTGGG	2 cut(s)	1302, 2022
BmuI	ACTGGG	2 cut(s)	1302, 2022
BpiI	GAAGAC	1 cut(s)	2265
BpmI	CTGGAG	1 cut(s)	447
Bpu14I	TTCGAA	1 cut(s)	1932
BpuEI	CTTGAG	1 cut(s)	1533
BpuMI	CCSGG	2 cut(s)	742, 2480
Bsa29I	ATCGAT	1 cut(s)	2234
BsaAI	YACGTR	3 cut(s)	418, 2120, 2354
BsaHI	GRCGYC	1 cut(s)	1564
BsaJI	CCNNGG	5 cut(s)	104, 1246, 1360, 1887, 2496
BsaWI	WCCGGW	2 cut(s)	2056, 2402
BsaXI	ACNNNNNCTCC	8 cut(s)	24, 54, 342, 372, 1966, 1996, 2023, 2053
Bsc4I	CCNNNNNNNGG	8 cut(s)	93, 94, 110, 128, 941, 2015, 2072, 2414
Bse1I	ACTGG	4 cut(s)	76, 1297, 1398, 2028
Bse3DI	GCAATG	3 cut(s)	656, 717, 1029
BseBI	CCWGG	5 cut(s)	26, 206, 936, 1362, 2383
BseCI	ATCGAT	1 cut(s)	2234
BseDI	CCNNGG	5 cut(s)	104, 1246, 1360, 1887, 2496
BseGI	GGATG	9 cut(s)	201, 519, 643, 700, 896, 953, 1256, 2299, 2337
BseLI	CCNNNNNNNGG	8 cut(s)	93, 94, 110, 128, 941, 2015, 2072, 2414
BseMI	GCAATG	3 cut(s)	656, 717, 1029
BseMII	CTCAG	4 cut(s)	1216, 1434, 1472, 2025
BseNI	ACTGG	4 cut(s)	76, 1297, 1398, 2028
BseRI	GAGGAG	3 cut(s)	93, 1536, 1998
BseSI	GKGCMC	1 cut(s)	2373
BseXI	GCAGC	1 cut(s)	1621
BseYI	CCCAGC	1 cut(s)	2366
BsgI	GTGCAG	1 cut(s)	1761
BshFI	GGCC	8 cut(s)	21, 1297, 1494, 1646, 1763, 1963, 2377, 2386
BshNI	GGYRCC	2 cut(s)	1563, 2059
BshVI	ATCGAT	1 cut(s)	2234
BsiHKAI	GWGCWC	1 cut(s)	627
BsiHKCI	CYCGRG	4 cut(s)	87, 703, 1139, 2413
BsiSI	CCGG	4 cut(s)	741, 2057, 2403, 2480
BslFI	GGGAC	8 cut(s)	127, 260, 959, 1575, 1619, 2089, 2413, 2461
BslI	CCNNNNNNNGG	8 cut(s)	93, 94, 110, 128, 941, 2015, 2072, 2414
BsmAI	GTCTC	4 cut(s)	289, 1439, 1826, 2087
BsmFI	GGGAC	8 cut(s)	127, 260, 959, 1575, 1619, 2089, 2413, 2461
BsnI	GGCC	8 cut(s)	21, 1297, 1494, 1646, 1763, 1963, 2377, 2386
BsoBI	CYCGRG	4 cut(s)	87, 703, 1139, 2413
Bsp119I	TTCGAA	1 cut(s)	1932
Bsp1286I	GDGCHC	2 cut(s)	627, 2373
Bsp1407I	TGTACA	2 cut(s)	1026, 2309
Bsp143I	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
BspACI	CCGC	7 cut(s)	1132, 1154, 1370, 1632, 1637, 1786, 1805
BspANI	GGCC	8 cut(s)	21, 1297, 1494, 1646, 1763, 1963, 2377, 2386
BspCNI	CTCAG	4 cut(s)	1215, 1435, 1473, 2026
BspDI	ATCGAT	1 cut(s)	2234
BspHI	TCATGA	1 cut(s)	672
BspMI	ACCTGC	2 cut(s)	917, 1733
BspPI	GGATC	1 cut(s)	511
BspT104I	TTCGAA	1 cut(s)	1932
BspT107I	GGYRCC	2 cut(s)	1563, 2059
BspTI	CTTAAG	1 cut(s)	1844
BsrBI	CCGCTC	2 cut(s)	1132, 1154
BsrDI	GCAATG	3 cut(s)	656, 717, 1029
BsrGI	TGTACA	2 cut(s)	1026, 2309
BsrI	ACTGG	4 cut(s)	76, 1297, 1398, 2028
BssECI	CCNNGG	5 cut(s)	104, 1246, 1360, 1887, 2496
BssMI	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
BssNAI	GTATAC	1 cut(s)	2115
BssNI	GRCGYC	1 cut(s)	1564
BssSI	CACGAG	1 cut(s)	1850
Bst1107I	GTATAC	1 cut(s)	2115
Bst2BI	CACGAG	1 cut(s)	1850
Bst2UI	CCWGG	5 cut(s)	26, 206, 936, 1362, 2383
Bst4CI	ACNGT	6 cut(s)	59, 688, 1454, 1505, 1692, 1863
Bst6I	CTCTTC	2 cut(s)	576, 1524
BstACI	GRCGYC	1 cut(s)	1564
BstAFI	CTTAAG	1 cut(s)	1844
BstAPI	GCANNNNNTGC	2 cut(s)	601, 1945
BstAUI	TGTACA	2 cut(s)	1026, 2309
BstBAI	YACGTR	3 cut(s)	418, 2120, 2354
BstBI	TTCGAA	1 cut(s)	1932
BstC8I	GCNNGC	3 cut(s)	455, 722, 1178
BstDEI	CTNAG	7 cut(s)	288, 1202, 1443, 1481, 2034, 2189, 2204
BstDSI	CCRYGG	2 cut(s)	1246, 2496
BstF5I	GGATG	9 cut(s)	201, 519, 643, 700, 896, 953, 1256, 2299, 2337
BstH2I	RGCGCY	1 cut(s)	1567
BstHHI	GCGC	2 cut(s)	595, 1566
BstKTI	GATC	9 cut(s)	301, 331, 519, 569, 760, 1836, 1909, 1993, 2107
BstMAI	GTCTC	4 cut(s)	289, 1439, 1826, 2087
BstMBI	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
BstMWI	GCNNNNNNNGC	8 cut(s)	548, 557, 601, 721, 1069, 1643, 1945, 2383
BstNI	CCWGG	5 cut(s)	26, 206, 936, 1362, 2383
BstSCI	CCNGG	7 cut(s)	24, 204, 740, 934, 1360, 2381, 2478
BstSLI	GKGCMC	1 cut(s)	2373
BstV1I	GCAGC	1 cut(s)	1621
BstV2I	GAAGAC	1 cut(s)	2265
BstX2I	RGATCY	1 cut(s)	298
BstYI	RGATCY	1 cut(s)	298
BstZ17I	GTATAC	1 cut(s)	2115
Bsu15I	ATCGAT	1 cut(s)	2234
BsuI	GTATCC	3 cut(s)	526, 799, 1063
BsuRI	GGCC	8 cut(s)	21, 1297, 1494, 1646, 1763, 1963, 2377, 2386
BsuTUI	ATCGAT	1 cut(s)	2234
BtgI	CCRYGG	2 cut(s)	1246, 2496
BtsCI	GGATG	9 cut(s)	201, 519, 643, 700, 896, 953, 1256, 2299, 2337
BveI	ACCTGC	2 cut(s)	917, 1733
Cac8I	GCNNGC	3 cut(s)	455, 722, 1178
CaiI	CAGNNNCTG	1 cut(s)	1748
CciI	TCATGA	1 cut(s)	672
CfoI	GCGC	2 cut(s)	595, 1566
ClaI	ATCGAT	1 cut(s)	2234
CpoI	CGGWCCG	1 cut(s)	1692
CspI	CGGWCCG	1 cut(s)	1692
CviAII	CATG	4 cut(s)	648, 673, 796, 2108
DdeI	CTNAG	7 cut(s)	288, 1202, 1443, 1481, 2034, 2189, 2204
DinI	GGCGCC	1 cut(s)	1565
DpnI	GATC	9 cut(s)	300, 330, 518, 568, 759, 1835, 1908, 1992, 2106
DpnII	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
DraI	TTTAAA	3 cut(s)	609, 1902, 2421
EaeI	YGGCCR	1 cut(s)	1644
Eam1104I	CTCTTC	2 cut(s)	576, 1524
EarI	CTCTTC	2 cut(s)	576, 1524
Eco147I	AGGCCT	1 cut(s)	2386
Eco32I	GATATC	1 cut(s)	2142
Eco47I	GGWCC	9 cut(s)	49, 614, 1589, 1692, 2400, 2405, 2471, 2493, 2501
Eco57I	CTGAAG	3 cut(s)	603, 1830, 1998
Eco72I	CACGTG	2 cut(s)	418, 2354
Eco88I	CYCGRG	4 cut(s)	87, 703, 1139, 2413
EcoO109I	RGGNCCY	2 cut(s)	49, 2501
EcoRI	GAATTC	1 cut(s)	668
EcoRII	CCWGG	5 cut(s)	24, 204, 934, 1360, 2381
EcoRV	GATATC	1 cut(s)	2142
EgeI	GGCGCC	1 cut(s)	1565
EheI	GGCGCC	1 cut(s)	1565
FaeI	CATG	4 cut(s)	651, 676, 799, 2111
FalI	AAGNNNNNCTT	2 cut(s)	2144, 2176
FaqI	GGGAC	8 cut(s)	127, 260, 959, 1575, 1619, 2089, 2413, 2461
FatI	CATG	4 cut(s)	647, 672, 795, 2107
FauI	CCCGC	2 cut(s)	1125, 1793
FauNDI	CATATG	1 cut(s)	1559
FbaI	TGATCA	3 cut(s)	1906, 1990, 2104
FblI	GTMKAC	2 cut(s)	956, 2114
Fnu4HI	GCNGC	2 cut(s)	1635, 1806
FokI	GGATG	9 cut(s)	188, 526, 630, 707, 903, 960, 1263, 2306, 2344
Fsp4HI	GCNGC	2 cut(s)	1635, 1806
FspBI	CTAG	9 cut(s)	498, 510, 716, 755, 869, 1172, 2000, 2361, 2439
FspI	TGCGCA	1 cut(s)	594
GlaI	GCGC	2 cut(s)	594, 1565
GluI	GCNGC	2 cut(s)	1635, 1806
GsaI	CCCAGC	1 cut(s)	2370
GsuI	CTGGAG	1 cut(s)	447
HaeII	RGCGCY	1 cut(s)	1567
HaeIII	GGCC	8 cut(s)	21, 1297, 1494, 1646, 1763, 1963, 2377, 2386
HapII	CCGG	4 cut(s)	741, 2057, 2403, 2480
HhaI	GCGC	2 cut(s)	595, 1566
Hin1I	GRCGYC	1 cut(s)	1564
Hin1II	CATG	4 cut(s)	651, 676, 799, 2111
Hin6I	GCGC	2 cut(s)	593, 1564
HinP1I	GCGC	2 cut(s)	593, 1564
HincII	GTYRAC	2 cut(s)	69, 957
HindII	GTYRAC	2 cut(s)	69, 957
HpaII	CCGG	4 cut(s)	741, 2057, 2403, 2480
HphI	GGTGA	2 cut(s)	325, 2042
Hpy166II	GTNNAC	6 cut(s)	69, 957, 1029, 1087, 2115, 2496
Hpy8I	GTNNAC	6 cut(s)	69, 957, 1029, 1087, 2115, 2496
HpyCH4III	ACNGT	6 cut(s)	59, 688, 1454, 1505, 1692, 1863
HpyCH4IV	ACGT	5 cut(s)	417, 1768, 2119, 2170, 2353
HpyCH4V	TGCA	4 cut(s)	604, 1232, 1742, 1867
HpyF10VI	GCNNNNNNNGC	8 cut(s)	548, 557, 601, 721, 1069, 1643, 1945, 2383
HpyF3I	CTNAG	7 cut(s)	288, 1202, 1443, 1481, 2034, 2189, 2204
HpySE526I	ACGT	5 cut(s)	417, 1768, 2119, 2170, 2353
Hsp92I	GRCGYC	1 cut(s)	1564
Hsp92II	CATG	4 cut(s)	651, 676, 799, 2111
HspAI	GCGC	2 cut(s)	593, 1564
KasI	GGCGCC	1 cut(s)	1563
Ksp22I	TGATCA	3 cut(s)	1906, 1990, 2104
Kzo9I	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
LmnI	GCTCC	5 cut(s)	106, 1129, 1412, 1987, 2044
Lsp1109I	GCAGC	1 cut(s)	1621
MaeI	CTAG	9 cut(s)	498, 510, 716, 755, 869, 1172, 2000, 2361, 2439
MaeII	ACGT	5 cut(s)	417, 1768, 2119, 2170, 2353
MaeIII	GTNAC	3 cut(s)	170, 313, 1288
MalI	GATC	9 cut(s)	300, 330, 518, 568, 759, 1835, 1908, 1992, 2106
MbiI	CCGCTC	2 cut(s)	1132, 1154
MboI	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
MflI	RGATCY	1 cut(s)	298
MhlI	GDGCHC	2 cut(s)	627, 2373
MlsI	TGGCCA	1 cut(s)	1646
MluNI	TGGCCA	1 cut(s)	1646
Mly113I	GGCGCC	1 cut(s)	1564
MlyI	GAGTC	5 cut(s)	282, 454, 634, 1601, 2405
MmeI	TCCRAC	3 cut(s)	10, 1134, 1524
Mox20I	TGGCCA	1 cut(s)	1646
MroXI	GAANNNNTTC	2 cut(s)	668, 2219
MscI	TGGCCA	1 cut(s)	1646
MseI	TTAA	9 cut(s)	608, 1317, 1356, 1710, 1845, 1901, 2180, 2286, 2420
MslI	CAYNNNNRTG	1 cut(s)	609
Msp20I	TGGCCA	1 cut(s)	1646
MspA1I	CMGCKG	1 cut(s)	1634
MspCI	CTTAAG	1 cut(s)	1844
MspI	CCGG	4 cut(s)	741, 2057, 2403, 2480
MspR9I	CCNGG	7 cut(s)	26, 206, 742, 936, 1362, 2383, 2480
MvaI	CCWGG	5 cut(s)	26, 206, 936, 1362, 2383
MwoI	GCNNNNNNNGC	8 cut(s)	548, 557, 601, 721, 1069, 1643, 1945, 2383
NarI	GGCGCC	1 cut(s)	1564
NciI	CCSGG	2 cut(s)	742, 2480
NdeI	CATATG	1 cut(s)	1559
NdeII	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
NlaIII	CATG	4 cut(s)	651, 676, 799, 2111
NmeAIII	GCCGAG	1 cut(s)	2109
NmuCI	GTSAC	2 cut(s)	170, 313
NsbI	TGCGCA	1 cut(s)	594
NspV	TTCGAA	1 cut(s)	1932
PaeR7I	CTCGAG	2 cut(s)	703, 1139
PagI	TCATGA	1 cut(s)	672
PceI	AGGCCT	1 cut(s)	2386
PdmI	GAANNNNTTC	2 cut(s)	668, 2219
PfeI	GAWTC	6 cut(s)	1144, 1651, 1715, 1796, 1883, 2466
PfoI	TCCNGGA	1 cut(s)	204
PkrI	GCNGC	2 cut(s)	1636, 1807
PleI	GAGTC	5 cut(s)	281, 454, 634, 1601, 2405
PluTI	GGCGCC	1 cut(s)	1567
PmaCI	CACGTG	2 cut(s)	418, 2354
PmlI	CACGTG	2 cut(s)	418, 2354
PpsI	GAGTC	5 cut(s)	281, 454, 634, 1601, 2405
Ppu21I	YACGTR	3 cut(s)	418, 2120, 2354
PpuMI	RGGWCCY	2 cut(s)	49, 2501
Psp5II	RGGWCCY	2 cut(s)	49, 2501
Psp6I	CCWGG	5 cut(s)	24, 204, 934, 1360, 2381
PspCI	CACGTG	2 cut(s)	418, 2354
PspFI	CCCAGC	1 cut(s)	2366
PspGI	CCWGG	5 cut(s)	24, 204, 934, 1360, 2381
PspPPI	RGGWCCY	2 cut(s)	49, 2501
PstNI	CAGNNNCTG	1 cut(s)	1748
PsuI	RGATCY	1 cut(s)	298
RseI	CAYNNNNRTG	1 cut(s)	609
Rsr2I	CGGWCCG	1 cut(s)	1692
RsrII	CGGWCCG	1 cut(s)	1692
SalI	GTCGAC	1 cut(s)	955
SaqAI	TTAA	9 cut(s)	608, 1317, 1356, 1710, 1845, 1901, 2180, 2286, 2420
SatI	GCNGC	2 cut(s)	1635, 1806
Sau3AI	GATC	9 cut(s)	298, 328, 516, 566, 757, 1833, 1906, 1990, 2104
ScaI	AGTACT	5 cut(s)	191, 701, 1392, 1680, 2032
SchI	GAGTC	5 cut(s)	282, 454, 634, 1601, 2405
ScrFI	CCNGG	7 cut(s)	26, 206, 742, 936, 1362, 2383, 2480
SduI	GDGCHC	2 cut(s)	627, 2373
SfiI	GGCCNNNNNGGCC	1 cut(s)	2383
SfoI	GGCGCC	1 cut(s)	1565
Sfr274I	CTCGAG	2 cut(s)	703, 1139
SfuI	TTCGAA	1 cut(s)	1932
SinI	GGWCC	9 cut(s)	49, 614, 1589, 1692, 2400, 2405, 2471, 2493, 2501
SlaI	CTCGAG	2 cut(s)	703, 1139
SmiI	ATTTAAAT	1 cut(s)	609
SmiMI	CAYNNNNRTG	1 cut(s)	609
SmlI	CTYRAG	4 cut(s)	703, 1139, 1548, 1844
SmoI	CTYRAG	4 cut(s)	703, 1139, 1548, 1844
SseBI	AGGCCT	1 cut(s)	2386
SsiI	CCGC	7 cut(s)	1132, 1154, 1370, 1632, 1637, 1786, 1805
SspDI	GGCGCC	1 cut(s)	1563
SspMI	CTAG	9 cut(s)	498, 510, 716, 755, 869, 1172, 2000, 2361, 2439
StuI	AGGCCT	1 cut(s)	2386
StyD4I	CCNGG	7 cut(s)	24, 204, 740, 934, 1360, 2381, 2478
SwaI	ATTTAAAT	1 cut(s)	609
TaaI	ACNGT	6 cut(s)	59, 688, 1454, 1505, 1692, 1863
TaiI	ACGT	5 cut(s)	420, 1771, 2122, 2173, 2356
TatI	WGTACW	9 cut(s)	189, 349, 699, 1026, 1390, 1454, 1678, 2030, 2309
TauI	GCSGC	1 cut(s)	1808
TfiI	GAWTC	6 cut(s)	1144, 1651, 1715, 1796, 1883, 2466
Tru1I	TTAA	9 cut(s)	608, 1317, 1356, 1710, 1845, 1901, 2180, 2286, 2420
Tru9I	TTAA	9 cut(s)	608, 1317, 1356, 1710, 1845, 1901, 2180, 2286, 2420
TseFI	GTSAC	2 cut(s)	170, 313
TseI	GCWGC	1 cut(s)	1634
Tsp45I	GTSAC	2 cut(s)	170, 313
TspDTI	ATGAA	9 cut(s)	190, 661, 1118, 1424, 1449, 1461, 1631, 2152, 2229
TspGWI	ACGGA	2 cut(s)	478, 1263
Vha464I	CTTAAG	1 cut(s)	1844
VpaK11BI	GGWCC	9 cut(s)	49, 614, 1589, 1692, 2400, 2405, 2471, 2493, 2501
XapI	RAATTY	7 cut(s)	467, 668, 1091, 1351, 1380, 1418, 2215
XbaI	TCTAGA	1 cut(s)	754
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2481
XhoI	CTCGAG	2 cut(s)	703, 1139
XmiI	GTMKAC	2 cut(s)	956, 2114
XmnI	GAANNNNTTC	2 cut(s)	668, 2219
XspI	CTAG	9 cut(s)	498, 510, 716, 755, 869, 1172, 2000, 2361, 2439
ZrmI	AGTACT	5 cut(s)	191, 701, 1392, 1680, 2032

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.