Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0000120

Physical Location & Seq

Genomic Coordinates Forward (+)

11065990 .. 11067814

Gene Structure 1825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g08470.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGTGGTATGGCAAAAGGCTGTTGAGGCTTCTTGATTTCTTCAATTGGAGCAATGATGCCGAGCTTGGATTTGACTTAGGCTCTTCCCTTTTGTATAGCAGAAATGGTGTGCAACCTTTGCATTTAAATGGTCATTCAGAGCACTACTTCTCAATCGTACCAACTGTTCTGAGGTATTTGCCGAAGGAATTCATGACCTTGACAACAGTTAAGGATGAGTACTCGAGAGCAATGCTAGGCAAGCAACCAGGCAAAGGTTCCGGGCAATCAGTTATAGATCGGAAGTTTGATTTCAGGTTCCGACTGATTGCATTCTTTCTCCTTATCCTGCAGGTAAGAGCAAGGGCAAAGGAAAAGACAGGGAAAAAGCATGATATGGGATACTCTTCATGGGTATTATCGAAGGAGAAGAAAACAGAGTATTTCGAGAGGCTAGATTGGGAGTGCCATTTCGAATGTGAGGAAGTGTTGAGCATTTTTTATTTATTTAGCAGGTCTGCTTGGCTATGGAGGATGGAGGTCGACATATATAGGAATTGTCCCAACAACGAGTGTGGTCGCTGCAAGGTTCACAAAGCTGATGTTACGTGTGAGGATTGTGGACAAATTTTATTCAATGAAATCCGACTTCTCGAAGTTCGGGGAGCGGTGCCTCTTCGATTTCTAAGCAGGCAATCTTGTTGGGGATATGGTTCTCGAGATTCGGATAGCGGTGCCTCTTCGATTTCTGGGCAAGCAATCTTGTTGGAATCTGCTTTGCCACGGAGCACAGAGGTTAACACATATAAGGATTTTCCAATAATCAAGCAGTGGTACTATTCTTTTATCCTTGTGGGTAATAGTAGGGTAACTGGGCCTTCAACATTTACCTGTCTTAACTTTGTCAGAGTTTTTTGGCAAAGTTGTCTTTGGAAATCCGCTTCTCGAAATTTGGAGAGTGGTGCCTCTTCGATTTTTGAACAAGTAGCCCTATTGAATCGATCTGGCTCTTTCTTTTATAGGAGCACCATTTTTCCATATCTTTGTACTTCTGAGACTTATTGTACTTCATTTATTTCTTCATCTTTTATGAGAATGTTTGGCCTGTCCGACCGTCGTTTGGACTTGAATGTTGTAGGAGAGGTAGCCATGTCTCCTCAGGATAACATATGGCGCCCATCATTCTTATCTCCTACTGGTCCCCTTACTATTGGGGACTCTGTGATGAAGAATGATATGATCGCTACGGTGGTGGCCAAGAATCTTCTCACTCCCAAAGACAACAGACTACTTTCCAAACGATCCGATGAGTTGGCTGTTAAGGATTCTCTGGCCTTCAGTGTTCAGTGTGCAGGTTCTGTGTCTAATATGGCCCAACGCCTATTTGCTCGAACTCGCCAAGTTGAATCATTGGCGGCTGAAGTGATAAGTTTCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009787 GO:0009789 GO:0009873 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010118 GO:0010185 GO:0010186 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032870 GO:0035556 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0080090 GO:0080134 GO:0090332 GO:0097159 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:1905957 GO:1905959 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

473

Amino Acids

54.01

Weight (kDa)

8.99

Isoelectric Point (pI)

49.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000120)

Species	Orthologous Gene IDs
malus_domestica	MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica	Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis	pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	322, 483, 1322
AccB1I	GGYRCC	4 cut(s)	649, 713, 941, 1152
AccBSI	CCGCTC	1 cut(s)	647
AccI	GTMKAC	1 cut(s)	522
AciI	CCGC	4 cut(s)	647, 711, 918, 1394
AclWI	GGATC	1 cut(s)	1275
AcoI	YGGCCR	1 cut(s)	1233
AcsI	RAATTY	3 cut(s)	188, 606, 928
AcuI	CTGAAG	2 cut(s)	1300, 1419
AcyI	GRCGYC	1 cut(s)	1153
AfaI	GTAC	5 cut(s)	159, 221, 815, 1027, 1045
AfiI	CCNNNNNNNGG	2 cut(s)	254, 1099
AflIII	ACRYGT	1 cut(s)	587
AgsI	TTSAA	8 cut(s)	43, 616, 861, 959, 976, 1108, 1385, 1414
AjnI	CCWGG	1 cut(s)	247
AluBI	AGCT	2 cut(s)	64, 578
AluI	AGCT	2 cut(s)	64, 578
Alw21I	GWGCWC	3 cut(s)	144, 770, 1007
Alw26I	GTCTC	2 cut(s)	1028, 1137
AlwI	GGATC	1 cut(s)	1275
AlwNI	CAGNNNCTG	1 cut(s)	1337
Ama87I	CYCGRG	2 cut(s)	223, 696
AoxI	GGCC	5 cut(s)	854, 1081, 1233, 1311, 1350
ApeKI	GCWGC	1 cut(s)	561
ApoI	RAATTY	3 cut(s)	188, 606, 928
Asp700I	GAANNNNTTC	1 cut(s)	188
AspLEI	GCGC	1 cut(s)	1155
AspS9I	GGNCC	3 cut(s)	854, 1178, 1351
AsuC2I	CCSGG	1 cut(s)	262
AsuII	TTCGAA	1 cut(s)	453
AvaI	CYCGRG	2 cut(s)	223, 696
AvaII	GGWCC	1 cut(s)	1178
AxyI	CCTNAGG	1 cut(s)	1137
BalI	TGGCCA	1 cut(s)	1235
BanI	GGYRCC	4 cut(s)	649, 713, 941, 1152
Bbv12I	GWGCWC	3 cut(s)	144, 770, 1007
BbvI	GCAGC	1 cut(s)	548
BccI	CCATC	2 cut(s)	508, 1165
BcgI	CGANNNNNNTGC	2 cut(s)	214, 248
BciT130I	CCWGG	1 cut(s)	249
BciVI	GTATCC	1 cut(s)	374
BcnI	CCSGG	1 cut(s)	262
BcoDI	GTCTC	2 cut(s)	1028, 1137
BfaI	CTAG	2 cut(s)	236, 434
BfmI	CTRYAG	1 cut(s)	329
BfoI	RGCGCY	1 cut(s)	1156
BfuAI	ACCTGC	3 cut(s)	322, 483, 1322
BfuI	GTATCC	1 cut(s)	374
BisI	GCNGC	2 cut(s)	562, 1395
BlsI	GCNGC	2 cut(s)	563, 1396
BmcAI	AGTACT	1 cut(s)	221
Bme1390I	CCNGG	2 cut(s)	249, 262
Bme18I	GGWCC	1 cut(s)	1178
BmeT110I	CYCGRG	2 cut(s)	223, 696
BmgT120I	GGNCC	3 cut(s)	854, 1178, 1351
BmiI	GGNNCC	7 cut(s)	259, 299, 651, 715, 943, 1154, 1180
BmrFI	CCNGG	2 cut(s)	249, 262
BmrI	ACTGGG	1 cut(s)	861
BmsI	GCATC	1 cut(s)	46
BmuI	ACTGGG	1 cut(s)	861
Bpu14I	TTCGAA	1 cut(s)	453
BpuMI	CCSGG	1 cut(s)	262
Bsa29I	ATCGAT	1 cut(s)	979
BsaAI	YACGTR	1 cut(s)	588
BsaHI	GRCGYC	1 cut(s)	1153
BsaJI	CCNNGG	1 cut(s)	761
Bsc4I	CCNNNNNNNGG	2 cut(s)	254, 1099
Bse1I	ACTGG	2 cut(s)	856, 1180
Bse21I	CCTNAGG	1 cut(s)	1137
Bse3DI	GCAATG	2 cut(s)	58, 237
BseBI	CCWGG	1 cut(s)	249
BseCI	ATCGAT	1 cut(s)	979
BseDI	CCNNGG	1 cut(s)	761
BseGI	GGATG	2 cut(s)	220, 519
BseLI	CCNNNNNNNGG	2 cut(s)	254, 1099
BseMI	GCAATG	2 cut(s)	58, 237
BseMII	CTCAG	3 cut(s)	161, 1023, 1151
BseNI	ACTGG	2 cut(s)	856, 1180
BseRI	GAGGAG	1 cut(s)	1125
BseXI	GCAGC	1 cut(s)	548
BsgI	GTGCAG	1 cut(s)	1350
Bsh1285I	CGRYCG	1 cut(s)	1093
BshFI	GGCC	5 cut(s)	856, 1083, 1235, 1313, 1352
BshNI	GGYRCC	4 cut(s)	649, 713, 941, 1152
BshVI	ATCGAT	1 cut(s)	979
BsiEI	CGRYCG	1 cut(s)	1093
BsiHKAI	GWGCWC	3 cut(s)	144, 770, 1007
BsiHKCI	CYCGRG	2 cut(s)	223, 696
BsiSI	CCGG	1 cut(s)	261
BslFI	GGGAC	3 cut(s)	525, 1164, 1208
BslI	CCNNNNNNNGG	2 cut(s)	254, 1099
BsmAI	GTCTC	2 cut(s)	1028, 1137
BsmFI	GGGAC	3 cut(s)	525, 1164, 1208
BsmI	GAATGC	1 cut(s)	311
BsnI	GGCC	5 cut(s)	856, 1083, 1235, 1313, 1352
BsoBI	CYCGRG	2 cut(s)	223, 696
Bsp119I	TTCGAA	1 cut(s)	453
Bsp1286I	GDGCHC	3 cut(s)	144, 770, 1007
Bsp143I	GATC	4 cut(s)	277, 980, 1218, 1280
BspACI	CCGC	4 cut(s)	647, 711, 918, 1394
BspANI	GGCC	5 cut(s)	856, 1083, 1235, 1313, 1352
BspCNI	CTCAG	3 cut(s)	162, 1024, 1150
BspDI	ATCGAT	1 cut(s)	979
BspHI	TCATGA	1 cut(s)	192
BspLI	GGNNCC	7 cut(s)	259, 299, 651, 715, 943, 1154, 1180
BspMAI	CTGCAG	1 cut(s)	333
BspMI	ACCTGC	3 cut(s)	322, 483, 1322
BspPI	GGATC	1 cut(s)	1275
BspQI	GCTCTTC	1 cut(s)	88
BspT104I	TTCGAA	1 cut(s)	453
BspT107I	GGYRCC	4 cut(s)	649, 713, 941, 1152
BsrBI	CCGCTC	1 cut(s)	647
BsrDI	GCAATG	2 cut(s)	58, 237
BsrI	ACTGG	2 cut(s)	856, 1180
BssECI	CCNNGG	1 cut(s)	761
BssMI	GATC	4 cut(s)	277, 980, 1218, 1280
BssNI	GRCGYC	1 cut(s)	1153
Bst2UI	CCWGG	1 cut(s)	249
Bst4CI	ACNGT	4 cut(s)	166, 208, 1094, 1228
Bst6I	CTCTTC	5 cut(s)	88, 391, 660, 724, 952
BstACI	GRCGYC	1 cut(s)	1153
BstAPI	GCANNNNNTGC	1 cut(s)	118
BstBAI	YACGTR	1 cut(s)	588
BstBI	TTCGAA	1 cut(s)	453
BstC8I	GCNNGC	3 cut(s)	242, 671, 735
BstDEI	CTNAG	5 cut(s)	76, 170, 665, 1032, 1137
BstDSI	CCRYGG	1 cut(s)	761
BstF5I	GGATG	2 cut(s)	220, 519
BstH2I	RGCGCY	1 cut(s)	1156
BstHHI	GCGC	1 cut(s)	1155
BstKTI	GATC	4 cut(s)	280, 983, 1221, 1283
BstMAI	GTCTC	2 cut(s)	1028, 1137
BstMBI	GATC	4 cut(s)	277, 980, 1218, 1280
BstMCI	CGRYCG	1 cut(s)	1093
BstMWI	GCNNNNNNNGC	3 cut(s)	25, 118, 241
BstNI	CCWGG	1 cut(s)	249
BstSCI	CCNGG	2 cut(s)	247, 260
BstSFI	CTRYAG	1 cut(s)	329
BstV1I	GCAGC	1 cut(s)	548
Bsu15I	ATCGAT	1 cut(s)	979
Bsu36I	CCTNAGG	1 cut(s)	1137
BsuI	GTATCC	1 cut(s)	374
BsuRI	GGCC	5 cut(s)	856, 1083, 1235, 1313, 1352
BsuTUI	ATCGAT	1 cut(s)	979
BtgI	CCRYGG	1 cut(s)	761
BtsCI	GGATG	2 cut(s)	220, 519
BtsI	GCAGTG	1 cut(s)	815
BtsIMutI	CAGTG	3 cut(s)	815, 1324, 1331
BveI	ACCTGC	3 cut(s)	322, 483, 1322
Cac8I	GCNNGC	3 cut(s)	242, 671, 735
CaiI	CAGNNNCTG	1 cut(s)	1337
CciI	TCATGA	1 cut(s)	192
CfoI	GCGC	1 cut(s)	1155
Cfr13I	GGNCC	3 cut(s)	854, 1178, 1351
ClaI	ATCGAT	1 cut(s)	979
Csp6I	GTAC	5 cut(s)	158, 220, 814, 1026, 1044
CspCI	CAANNNNNGTGG	2 cut(s)	535, 570
CviAII	CATG	4 cut(s)	193, 371, 390, 1129
CviQI	GTAC	5 cut(s)	158, 220, 814, 1026, 1044
DdeI	CTNAG	5 cut(s)	76, 170, 665, 1032, 1137
DinI	GGCGCC	1 cut(s)	1154
DpnI	GATC	4 cut(s)	279, 982, 1220, 1282
DpnII	GATC	4 cut(s)	277, 980, 1218, 1280
DraI	TTTAAA	1 cut(s)	126
EaeI	YGGCCR	1 cut(s)	1233
Eam1104I	CTCTTC	5 cut(s)	88, 391, 660, 724, 952
EarI	CTCTTC	5 cut(s)	88, 391, 660, 724, 952
Eco47I	GGWCC	1 cut(s)	1178
Eco57I	CTGAAG	2 cut(s)	1300, 1419
Eco81I	CCTNAGG	1 cut(s)	1137
Eco88I	CYCGRG	2 cut(s)	223, 696
EcoRI	GAATTC	1 cut(s)	188
EcoRII	CCWGG	1 cut(s)	247
EgeI	GGCGCC	1 cut(s)	1154
EheI	GGCGCC	1 cut(s)	1154
FaeI	CATG	4 cut(s)	196, 374, 393, 1132
FaqI	GGGAC	3 cut(s)	525, 1164, 1208
FatI	CATG	4 cut(s)	192, 370, 389, 1128
FauNDI	CATATG	1 cut(s)	1148
FblI	GTMKAC	1 cut(s)	522
Fnu4HI	GCNGC	2 cut(s)	562, 1395
FokI	GGATG	2 cut(s)	227, 526
Fsp4HI	GCNGC	2 cut(s)	562, 1395
FspBI	CTAG	2 cut(s)	236, 434
GlaI	GCGC	1 cut(s)	1154
GluI	GCNGC	2 cut(s)	562, 1395
HaeII	RGCGCY	1 cut(s)	1156
HaeIII	GGCC	5 cut(s)	856, 1083, 1235, 1313, 1352
HapII	CCGG	1 cut(s)	261
HhaI	GCGC	1 cut(s)	1155
Hin1I	GRCGYC	1 cut(s)	1153
Hin1II	CATG	4 cut(s)	196, 374, 393, 1132
Hin6I	GCGC	1 cut(s)	1153
HinP1I	GCGC	1 cut(s)	1153
HincII	GTYRAC	2 cut(s)	523, 778
HindII	GTYRAC	2 cut(s)	523, 778
HinfI	GANTC	7 cut(s)	701, 749, 976, 1196, 1240, 1304, 1385
HpaI	GTTAAC	1 cut(s)	778
HpaII	CCGG	1 cut(s)	261
Hpy166II	GTNNAC	4 cut(s)	523, 571, 602, 778
Hpy188III	TCNNGA	9 cut(s)	32, 193, 225, 427, 632, 696, 698, 924, 1139
Hpy8I	GTNNAC	4 cut(s)	523, 571, 602, 778
Hpy99I	CGWCG	1 cut(s)	1098
HpyAV	CCTTC	4 cut(s)	178, 397, 867, 1324
HpyCH4III	ACNGT	4 cut(s)	166, 208, 1094, 1228
HpyCH4IV	ACGT	1 cut(s)	587
HpyCH4V	TGCA	6 cut(s)	112, 121, 311, 331, 564, 1331
HpyF10VI	GCNNNNNNNGC	3 cut(s)	25, 118, 241
HpyF3I	CTNAG	5 cut(s)	76, 170, 665, 1032, 1137
HpySE526I	ACGT	1 cut(s)	587
Hsp92I	GRCGYC	1 cut(s)	1153
Hsp92II	CATG	4 cut(s)	196, 374, 393, 1132
HspAI	GCGC	1 cut(s)	1153
KasI	GGCGCC	1 cut(s)	1152
KspAI	GTTAAC	1 cut(s)	778
Kzo9I	GATC	4 cut(s)	277, 980, 1218, 1280
LguI	GCTCTTC	1 cut(s)	88
LmnI	GCTCC	4 cut(s)	48, 644, 765, 1002
Lsp1109I	GCAGC	1 cut(s)	548
LweI	GCATC	1 cut(s)	46
MaeI	CTAG	2 cut(s)	236, 434
MaeII	ACGT	1 cut(s)	587
MaeIII	GTNAC	2 cut(s)	583, 847
MalI	GATC	4 cut(s)	279, 982, 1220, 1282
MbiI	CCGCTC	1 cut(s)	647
MboI	GATC	4 cut(s)	277, 980, 1218, 1280
MfeI	CAATTG	1 cut(s)	43
MhlI	GDGCHC	3 cut(s)	144, 770, 1007
MlsI	TGGCCA	1 cut(s)	1235
MluCI	AATT	5 cut(s)	43, 188, 535, 606, 928
MluNI	TGGCCA	1 cut(s)	1235
Mly113I	GGCGCC	1 cut(s)	1153
MlyI	GAGTC	1 cut(s)	1190
MmeI	TCCRAC	4 cut(s)	325, 649, 726, 1113
Mox20I	TGGCCA	1 cut(s)	1235
MroXI	GAANNNNTTC	1 cut(s)	188
MscI	TGGCCA	1 cut(s)	1235
MseI	TTAA	5 cut(s)	125, 210, 777, 876, 1299
MslI	CAYNNNNRTG	1 cut(s)	126
Msp20I	TGGCCA	1 cut(s)	1235
MspI	CCGG	1 cut(s)	261
MspR9I	CCNGG	2 cut(s)	249, 262
MunI	CAATTG	1 cut(s)	43
Mva1269I	GAATGC	1 cut(s)	311
MvaI	CCWGG	1 cut(s)	249
MwoI	GCNNNNNNNGC	3 cut(s)	25, 118, 241
NarI	GGCGCC	1 cut(s)	1153
NciI	CCSGG	1 cut(s)	262
NdeI	CATATG	1 cut(s)	1148
NdeII	GATC	4 cut(s)	277, 980, 1218, 1280
NlaIII	CATG	4 cut(s)	196, 374, 393, 1132
NlaIV	GGNNCC	7 cut(s)	259, 299, 651, 715, 943, 1154, 1180
NmeAIII	GCCGAG	1 cut(s)	85
NspV	TTCGAA	1 cut(s)	453
PaeR7I	CTCGAG	2 cut(s)	223, 696
PagI	TCATGA	1 cut(s)	192
PciSI	GCTCTTC	1 cut(s)	88
PctI	GAATGC	1 cut(s)	311
PdmI	GAANNNNTTC	1 cut(s)	188
PfeI	GAWTC	6 cut(s)	701, 749, 976, 1240, 1304, 1385
PkrI	GCNGC	2 cut(s)	563, 1396
PleI	GAGTC	1 cut(s)	1190
PluTI	GGCGCC	1 cut(s)	1156
PpsI	GAGTC	1 cut(s)	1190
Ppu21I	YACGTR	1 cut(s)	588
Psp6I	CCWGG	1 cut(s)	247
PspGI	CCWGG	1 cut(s)	247
PspN4I	GGNNCC	7 cut(s)	259, 299, 651, 715, 943, 1154, 1180
PspPI	GGNCC	3 cut(s)	854, 1178, 1351
PsrI	GAACNNNNNNTAC	2 cut(s)	150, 182
PstI	CTGCAG	1 cut(s)	333
PstNI	CAGNNNCTG	1 cut(s)	1337
RsaI	GTAC	5 cut(s)	159, 221, 815, 1027, 1045
RsaNI	GTAC	5 cut(s)	158, 220, 814, 1026, 1044
RseI	CAYNNNNRTG	1 cut(s)	126
SalI	GTCGAC	1 cut(s)	521
SapI	GCTCTTC	1 cut(s)	88
SaqAI	TTAA	5 cut(s)	125, 210, 777, 876, 1299
SatI	GCNGC	2 cut(s)	562, 1395
Sau3AI	GATC	4 cut(s)	277, 980, 1218, 1280
Sau96I	GGNCC	3 cut(s)	854, 1178, 1351
SbfI	CCTGCAGG	1 cut(s)	333
ScaI	AGTACT	1 cut(s)	221
SchI	GAGTC	1 cut(s)	1190
ScrFI	CCNGG	2 cut(s)	249, 262
SdaI	CCTGCAGG	1 cut(s)	333
SduI	GDGCHC	3 cut(s)	144, 770, 1007
SfaNI	GCATC	1 cut(s)	46
SfcI	CTRYAG	1 cut(s)	329
SfoI	GGCGCC	1 cut(s)	1154
Sfr274I	CTCGAG	2 cut(s)	223, 696
SfuI	TTCGAA	1 cut(s)	453
SinI	GGWCC	1 cut(s)	1178
SlaI	CTCGAG	2 cut(s)	223, 696
SmiI	ATTTAAAT	1 cut(s)	126
SmiMI	CAYNNNNRTG	1 cut(s)	126
SmlI	CTYRAG	2 cut(s)	223, 696
SmoI	CTYRAG	2 cut(s)	223, 696
Sse8387I	CCTGCAGG	1 cut(s)	333
Sse9I	AATT	5 cut(s)	43, 188, 535, 606, 928
SsiI	CCGC	4 cut(s)	647, 711, 918, 1394
SspDI	GGCGCC	1 cut(s)	1152
SspMI	CTAG	2 cut(s)	236, 434
StyD4I	CCNGG	2 cut(s)	247, 260
SwaI	ATTTAAAT	1 cut(s)	126
TaaI	ACNGT	4 cut(s)	166, 208, 1094, 1228
TaiI	ACGT	1 cut(s)	590
TasI	AATT	5 cut(s)	43, 188, 535, 606, 928
TatI	WGTACW	3 cut(s)	219, 1025, 1043
TauI	GCSGC	1 cut(s)	1397
TfiI	GAWTC	6 cut(s)	701, 749, 976, 1240, 1304, 1385
Tru1I	TTAA	5 cut(s)	125, 210, 777, 876, 1299
Tru9I	TTAA	5 cut(s)	125, 210, 777, 876, 1299
TscAI	CASTG	3 cut(s)	815, 1324, 1331
TseI	GCWGC	1 cut(s)	561
TspDTI	ATGAA	6 cut(s)	181, 378, 633, 1038, 1050, 1220
TspGWI	ACGGA	1 cut(s)	778
TspRI	CASTG	3 cut(s)	815, 1324, 1331
VpaK11BI	GGWCC	1 cut(s)	1178
XapI	RAATTY	3 cut(s)	188, 606, 928
XhoI	CTCGAG	2 cut(s)	223, 696
XmiI	GTMKAC	1 cut(s)	522
XmnI	GAANNNNTTC	1 cut(s)	188
XspI	CTAG	2 cut(s)	236, 434
ZrmI	AGTACT	1 cut(s)	221

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.