Nudix hydrolase 3-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 868 |
| AccB1I | GGYRCC | 3 cut(s) | 78, 868, 1184 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 534 |
| AccBSI | CCGCTC | 1 cut(s) | 297 |
| AccII | CGCG | 2 cut(s) | 56, 61 |
| AccIII | TCCGGA | 1 cut(s) | 899 |
| AciI | CCGC | 6 cut(s) | 59, 295, 491, 600, 630, 1104 |
| AcoI | YGGCCR | 2 cut(s) | 219, 536 |
| AcsI | RAATTY | 1 cut(s) | 1240 |
| AcvI | CACGTG | 1 cut(s) | 385 |
| AcyI | GRCGYC | 2 cut(s) | 79, 138 |
| AdeI | CACNNNGTG | 1 cut(s) | 245 |
| AfaI | GTAC | 2 cut(s) | 365, 870 |
| AfeI | AGCGCT | 1 cut(s) | 840 |
| AflII | CTTAAG | 2 cut(s) | 359, 1204 |
| AgsI | TTSAA | 6 cut(s) | 227, 678, 814, 1027, 1216, 1245 |
| AjiI | CACGTC | 1 cut(s) | 1254 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 8, 40 |
| AluBI | AGCT | 7 cut(s) | 24, 149, 161, 424, 433, 778, 1159 |
| AluI | AGCT | 7 cut(s) | 24, 149, 161, 424, 433, 778, 1159 |
| Alw21I | GWGCWC | 1 cut(s) | 1230 |
| Alw26I | GTCTC | 3 cut(s) | 341, 913, 1261 |
| Alw44I | GTGCAC | 1 cut(s) | 1226 |
| Aor13HI | TCCGGA | 1 cut(s) | 899 |
| Aor51HI | AGCGCT | 1 cut(s) | 840 |
| AoxI | GGCC | 5 cut(s) | 219, 277, 536, 549, 999 |
| ApaLI | GTGCAC | 1 cut(s) | 1226 |
| ApeKI | GCWGC | 3 cut(s) | 193, 858, 1031 |
| ApoI | RAATTY | 1 cut(s) | 1240 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 451, 463, 483, 495, 1238, 1270 |
| AscI | GGCGCGCC | 1 cut(s) | 54 |
| AseI | ATTAAT | 2 cut(s) | 317, 737 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 892 |
| Asp718I | GGTACC | 1 cut(s) | 868 |
| AspLEI | GCGC | 4 cut(s) | 56, 58, 81, 841 |
| AspS9I | GGNCC | 2 cut(s) | 207, 277 |
| AsuC2I | CCSGG | 1 cut(s) | 519 |
| AsuHPI | GGTGA | 3 cut(s) | 128, 1024, 1249 |
| AvaII | GGWCC | 1 cut(s) | 207 |
| BaeGI | GKGCMC | 1 cut(s) | 1230 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 860, 893 |
| BalI | TGGCCA | 1 cut(s) | 538 |
| BanI | GGYRCC | 3 cut(s) | 78, 868, 1184 |
| BanII | GRGCYC | 1 cut(s) | 524 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 658, 690 |
| BbrPI | CACGTG | 1 cut(s) | 385 |
| BbsI | GAAGAC | 3 cut(s) | 98, 126, 794 |
| Bbv12I | GWGCWC | 1 cut(s) | 1230 |
| BbvI | GCAGC | 3 cut(s) | 180, 870, 1018 |
| BccI | CCATC | 1 cut(s) | 1174 |
| BceAI | ACGGC | 4 cut(s) | 206, 1172, 1208, 1286 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 28 |
| BcnI | CCSGG | 1 cut(s) | 519 |
| BcoDI | GTCTC | 3 cut(s) | 341, 913, 1261 |
| BfaI | CTAG | 3 cut(s) | 162, 651, 969 |
| BfoI | RGCGCY | 2 cut(s) | 82, 842 |
| BfrI | CTTAAG | 2 cut(s) | 359, 1204 |
| BisI | GCNGC | 5 cut(s) | 59, 194, 492, 859, 1032 |
| BlsI | GCNGC | 5 cut(s) | 60, 195, 493, 860, 1033 |
| Bme1390I | CCNGG | 1 cut(s) | 519 |
| Bme18I | GGWCC | 1 cut(s) | 207 |
| BmgBI | CACGTC | 1 cut(s) | 1254 |
| BmgT120I | GGNCC | 2 cut(s) | 207, 277 |
| BmiI | GGNNCC | 3 cut(s) | 80, 870, 1186 |
| BmrFI | CCNGG | 1 cut(s) | 519 |
| BmrI | ACTGGG | 1 cut(s) | 657 |
| BmsI | GCATC | 8 cut(s) | 120, 444, 552, 597, 612, 641, 984, 1210 |
| BmuI | ACTGGG | 1 cut(s) | 657 |
| BpiI | GAAGAC | 3 cut(s) | 98, 126, 794 |
| Bpu10I | CCTNAGC | 2 cut(s) | 20, 38 |
| BpuEI | CTTGAG | 2 cut(s) | 323, 935 |
| BpuMI | CCSGG | 1 cut(s) | 519 |
| BsaAI | YACGTR | 1 cut(s) | 385 |
| BsaHI | GRCGYC | 2 cut(s) | 79, 138 |
| BsaJI | CCNNGG | 3 cut(s) | 991, 1188, 1233 |
| BsaWI | WCCGGW | 2 cut(s) | 899, 1166 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 856, 886 |
| Bse1I | ACTGG | 1 cut(s) | 663 |
| BseAI | TCCGGA | 1 cut(s) | 899 |
| BseDI | CCNNGG | 3 cut(s) | 991, 1188, 1233 |
| BseGI | GGATG | 4 cut(s) | 459, 524, 896, 975 |
| BseMII | CTCAG | 1 cut(s) | 924 |
| BseNI | ACTGG | 1 cut(s) | 663 |
| BsePI | GCGCGC | 1 cut(s) | 54 |
| BseSI | GKGCMC | 1 cut(s) | 1230 |
| BseXI | GCAGC | 3 cut(s) | 180, 870, 1018 |
| Bsh1236I | CGCG | 2 cut(s) | 56, 61 |
| BshFI | GGCC | 5 cut(s) | 221, 279, 538, 551, 1001 |
| BshNI | GGYRCC | 3 cut(s) | 78, 868, 1184 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1230 |
| BsiSI | CCGG | 4 cut(s) | 518, 862, 900, 1167 |
| BsmAI | GTCTC | 3 cut(s) | 341, 913, 1261 |
| BsmBI | CGTCTC | 2 cut(s) | 913, 1261 |
| BsmI | GAATGC | 1 cut(s) | 820 |
| BsnI | GGCC | 5 cut(s) | 221, 279, 538, 551, 1001 |
| Bsp1286I | GDGCHC | 2 cut(s) | 524, 1230 |
| Bsp13I | TCCGGA | 1 cut(s) | 899 |
| Bsp143I | GATC | 2 cut(s) | 348, 1075 |
| BspACI | CCGC | 6 cut(s) | 59, 295, 491, 600, 630, 1104 |
| BspANI | GGCC | 5 cut(s) | 221, 279, 538, 551, 1001 |
| BspCNI | CTCAG | 1 cut(s) | 923 |
| BspEI | TCCGGA | 1 cut(s) | 899 |
| BspFNI | CGCG | 2 cut(s) | 56, 61 |
| BspLI | GGNNCC | 3 cut(s) | 80, 870, 1186 |
| BspT107I | GGYRCC | 3 cut(s) | 78, 868, 1184 |
| BspTI | CTTAAG | 2 cut(s) | 359, 1204 |
| BsrBI | CCGCTC | 1 cut(s) | 297 |
| BsrI | ACTGG | 1 cut(s) | 663 |
| BssECI | CCNNGG | 3 cut(s) | 991, 1188, 1233 |
| BssHII | GCGCGC | 1 cut(s) | 54 |
| BssMI | GATC | 2 cut(s) | 348, 1075 |
| BssNI | GRCGYC | 2 cut(s) | 79, 138 |
| BssT1I | CCWWGG | 2 cut(s) | 991, 1233 |
| Bst4CI | ACNGT | 6 cut(s) | 104, 207, 467, 479, 868, 1132 |
| Bst6I | CTCTTC | 2 cut(s) | 410, 559 |
| BstACI | GRCGYC | 2 cut(s) | 79, 138 |
| BstAFI | CTTAAG | 2 cut(s) | 359, 1204 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 824 |
| BstBAI | YACGTR | 1 cut(s) | 385 |
| BstC8I | GCNNGC | 6 cut(s) | 56, 287, 291, 295, 390, 489 |
| BstDEI | CTNAG | 5 cut(s) | 20, 38, 242, 797, 910 |
| BstDSI | CCRYGG | 1 cut(s) | 1188 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1207 |
| BstF5I | GGATG | 4 cut(s) | 459, 524, 896, 975 |
| BstFNI | CGCG | 2 cut(s) | 56, 61 |
| BstH2I | RGCGCY | 2 cut(s) | 82, 842 |
| BstHHI | GCGC | 4 cut(s) | 56, 58, 81, 841 |
| BstKTI | GATC | 2 cut(s) | 351, 1078 |
| BstMAI | GTCTC | 3 cut(s) | 341, 913, 1261 |
| BstMBI | GATC | 2 cut(s) | 348, 1075 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 146, 430, 528, 824 |
| BstSCI | CCNGG | 1 cut(s) | 517 |
| BstSLI | GKGCMC | 1 cut(s) | 1230 |
| BstUI | CGCG | 2 cut(s) | 56, 61 |
| BstV1I | GCAGC | 3 cut(s) | 180, 870, 1018 |
| BstV2I | GAAGAC | 3 cut(s) | 98, 126, 794 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1169 |
| BsuRI | GGCC | 5 cut(s) | 221, 279, 538, 551, 1001 |
| BtgI | CCRYGG | 1 cut(s) | 1188 |
| BtrI | CACGTC | 1 cut(s) | 1254 |
| BtsCI | GGATG | 4 cut(s) | 459, 524, 896, 975 |
| BtsI | GCAGTG | 1 cut(s) | 49 |
| BtsIMutI | CAGTG | 3 cut(s) | 49, 257, 1047 |
| Cac8I | GCNNGC | 6 cut(s) | 56, 287, 291, 295, 390, 489 |
| CfoI | GCGC | 4 cut(s) | 56, 58, 81, 841 |
| Cfr13I | GGNCC | 2 cut(s) | 207, 277 |
| CpoI | CGGWCCG | 1 cut(s) | 207 |
| CseI | GACGC | 2 cut(s) | 50, 146 |
| Csp6I | GTAC | 2 cut(s) | 364, 869 |
| CspI | CGGWCCG | 1 cut(s) | 207 |
| CviAII | CATG | 4 cut(s) | 274, 592, 819, 1035 |
| CviQI | GTAC | 2 cut(s) | 364, 869 |
| DdeI | CTNAG | 5 cut(s) | 20, 38, 242, 797, 910 |
| DinI | GGCGCC | 1 cut(s) | 80 |
| DpnI | GATC | 2 cut(s) | 350, 1077 |
| DpnII | GATC | 2 cut(s) | 348, 1075 |
| DraI | TTTAAA | 1 cut(s) | 693 |
| DraIII | CACNNNGTG | 1 cut(s) | 245 |
| EaeI | YGGCCR | 2 cut(s) | 219, 536 |
| Eam1104I | CTCTTC | 2 cut(s) | 410, 559 |
| EarI | CTCTTC | 2 cut(s) | 410, 559 |
| EciI | GGCGGA | 1 cut(s) | 589 |
| Eco130I | CCWWGG | 2 cut(s) | 991, 1233 |
| Eco147I | AGGCCT | 1 cut(s) | 551 |
| Eco24I | GRGCYC | 1 cut(s) | 524 |
| Eco47I | GGWCC | 1 cut(s) | 207 |
| Eco47III | AGCGCT | 1 cut(s) | 840 |
| Eco72I | CACGTG | 1 cut(s) | 385 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1207 |
| EcoRI | GAATTC | 1 cut(s) | 1240 |
| EcoT14I | CCWWGG | 2 cut(s) | 991, 1233 |
| EcoT22I | ATGCAT | 1 cut(s) | 820 |
| EcoT38I | GRGCYC | 1 cut(s) | 524 |
| EgeI | GGCGCC | 1 cut(s) | 80 |
| EheI | GGCGCC | 1 cut(s) | 80 |
| ErhI | CCWWGG | 2 cut(s) | 991, 1233 |
| Esp3I | CGTCTC | 2 cut(s) | 913, 1261 |
| FaeI | CATG | 4 cut(s) | 277, 595, 822, 1038 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 790, 822, 825, 857 |
| FatI | CATG | 4 cut(s) | 273, 591, 818, 1034 |
| FauI | CCCGC | 1 cut(s) | 302 |
| Fnu4HI | GCNGC | 5 cut(s) | 59, 194, 492, 859, 1032 |
| FokI | GGATG | 4 cut(s) | 466, 511, 883, 962 |
| FriOI | GRGCYC | 1 cut(s) | 524 |
| Fsp4HI | GCNGC | 5 cut(s) | 59, 194, 492, 859, 1032 |
| FspBI | CTAG | 3 cut(s) | 162, 651, 969 |
| GlaI | GCGC | 4 cut(s) | 55, 57, 80, 840 |
| GluI | GCNGC | 5 cut(s) | 59, 194, 492, 859, 1032 |
| HaeII | RGCGCY | 2 cut(s) | 82, 842 |
| HaeIII | GGCC | 5 cut(s) | 221, 279, 538, 551, 1001 |
| HapII | CCGG | 4 cut(s) | 518, 862, 900, 1167 |
| HgaI | GACGC | 2 cut(s) | 50, 146 |
| HhaI | GCGC | 4 cut(s) | 56, 58, 81, 841 |
| Hin1I | GRCGYC | 2 cut(s) | 79, 138 |
| Hin1II | CATG | 4 cut(s) | 277, 595, 822, 1038 |
| Hin6I | GCGC | 4 cut(s) | 54, 56, 79, 839 |
| HinP1I | GCGC | 4 cut(s) | 54, 56, 79, 839 |
| HincII | GTYRAC | 1 cut(s) | 1195 |
| HindII | GTYRAC | 1 cut(s) | 1195 |
| HindIII | AAGCTT | 1 cut(s) | 422 |
| HinfI | GANTC | 6 cut(s) | 122, 230, 311, 440, 726, 926 |
| HpaI | GTTAAC | 1 cut(s) | 1195 |
| HpaII | CCGG | 4 cut(s) | 518, 862, 900, 1167 |
| HphI | GGTGA | 3 cut(s) | 128, 1024, 1249 |
| Hpy166II | GTNNAC | 3 cut(s) | 683, 1195, 1228 |
| Hpy188I | TCNGA | 4 cut(s) | 211, 576, 621, 913 |
| Hpy188III | TCNNGA | 5 cut(s) | 201, 227, 502, 651, 900 |
| Hpy8I | GTNNAC | 3 cut(s) | 683, 1195, 1228 |
| Hpy99I | CGWCG | 1 cut(s) | 409 |
| HpyAV | CCTTC | 5 cut(s) | 93, 591, 606, 621, 636 |
| HpyCH4III | ACNGT | 6 cut(s) | 104, 207, 467, 479, 868, 1132 |
| HpyCH4IV | ACGT | 6 cut(s) | 72, 384, 851, 906, 1248, 1253 |
| HpyCH4V | TGCA | 9 cut(s) | 133, 257, 382, 457, 818, 858, 1034, 1228, 1286 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 146, 430, 528, 824 |
| HpyF3I | CTNAG | 5 cut(s) | 20, 38, 242, 797, 910 |
| HpySE526I | ACGT | 6 cut(s) | 72, 384, 851, 906, 1248, 1253 |
| Hsp92I | GRCGYC | 2 cut(s) | 79, 138 |
| Hsp92II | CATG | 4 cut(s) | 277, 595, 822, 1038 |
| HspAI | GCGC | 4 cut(s) | 54, 56, 79, 839 |
| KasI | GGCGCC | 1 cut(s) | 78 |
| Kpn2I | TCCGGA | 1 cut(s) | 899 |
| KpnI | GGTACC | 1 cut(s) | 872 |
| KspAI | GTTAAC | 1 cut(s) | 1195 |
| Kzo9I | GATC | 2 cut(s) | 348, 1075 |
| LmnI | GCTCC | 5 cut(s) | 302, 577, 622, 972, 1164 |
| Lsp1109I | GCAGC | 3 cut(s) | 180, 870, 1018 |
| LweI | GCATC | 8 cut(s) | 120, 444, 552, 597, 612, 641, 984, 1210 |
| MaeI | CTAG | 3 cut(s) | 162, 651, 969 |
| MaeII | ACGT | 6 cut(s) | 72, 384, 851, 906, 1248, 1253 |
| MaeIII | GTNAC | 5 cut(s) | 68, 461, 713, 1126, 1249 |
| MalI | GATC | 2 cut(s) | 350, 1077 |
| MbiI | CCGCTC | 1 cut(s) | 297 |
| MboI | GATC | 2 cut(s) | 348, 1075 |
| MboII | GAAGA | 8 cut(s) | 87, 98, 131, 427, 546, 794, 921, 924 |
| MhlI | GDGCHC | 2 cut(s) | 524, 1230 |
| MlsI | TGGCCA | 1 cut(s) | 538 |
| MluCI | AATT | 5 cut(s) | 29, 734, 782, 1050, 1240 |
| MluNI | TGGCCA | 1 cut(s) | 538 |
| Mly113I | GGCGCC | 1 cut(s) | 79 |
| MlyI | GAGTC | 2 cut(s) | 116, 720 |
| MmeI | TCCRAC | 2 cut(s) | 294, 1003 |
| Mox20I | TGGCCA | 1 cut(s) | 538 |
| Mph1103I | ATGCAT | 1 cut(s) | 820 |
| MroI | TCCGGA | 1 cut(s) | 899 |
| MroXI | GAANNNNTTC | 1 cut(s) | 892 |
| MscI | TGGCCA | 1 cut(s) | 538 |
| MseI | TTAA | 7 cut(s) | 317, 360, 692, 737, 879, 1194, 1205 |
| Msp20I | TGGCCA | 1 cut(s) | 538 |
| MspCI | CTTAAG | 2 cut(s) | 359, 1204 |
| MspI | CCGG | 4 cut(s) | 518, 862, 900, 1167 |
| MspR9I | CCNGG | 1 cut(s) | 519 |
| Mva1269I | GAATGC | 1 cut(s) | 820 |
| MvnI | CGCG | 2 cut(s) | 56, 61 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 146, 430, 528, 824 |
| NarI | GGCGCC | 1 cut(s) | 79 |
| NciI | CCSGG | 1 cut(s) | 519 |
| NdeII | GATC | 2 cut(s) | 348, 1075 |
| NlaIII | CATG | 4 cut(s) | 277, 595, 822, 1038 |
| NlaIV | GGNNCC | 3 cut(s) | 80, 870, 1186 |
| NmuCI | GTSAC | 3 cut(s) | 461, 1126, 1249 |
| NsiI | ATGCAT | 1 cut(s) | 820 |
| PalAI | GGCGCGCC | 1 cut(s) | 54 |
| PauI | GCGCGC | 1 cut(s) | 54 |
| PceI | AGGCCT | 1 cut(s) | 551 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 872 |
| PctI | GAATGC | 1 cut(s) | 820 |
| PdmI | GAANNNNTTC | 1 cut(s) | 892 |
| PfeI | GAWTC | 4 cut(s) | 230, 311, 440, 926 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 534 |
| PkrI | GCNGC | 5 cut(s) | 60, 195, 493, 860, 1033 |
| PleI | GAGTC | 2 cut(s) | 116, 720 |
| PluTI | GGCGCC | 1 cut(s) | 82 |
| PmaCI | CACGTG | 1 cut(s) | 385 |
| PmlI | CACGTG | 1 cut(s) | 385 |
| PpsI | GAGTC | 2 cut(s) | 116, 720 |
| Ppu21I | YACGTR | 1 cut(s) | 385 |
| PshBI | ATTAAT | 2 cut(s) | 317, 737 |
| PspCI | CACGTG | 1 cut(s) | 385 |
| PspN4I | GGNNCC | 3 cut(s) | 80, 870, 1186 |
| PspPI | GGNCC | 2 cut(s) | 207, 277 |
| PteI | GCGCGC | 1 cut(s) | 54 |
| RsaI | GTAC | 2 cut(s) | 365, 870 |
| RsaNI | GTAC | 2 cut(s) | 364, 869 |
| Rsr2I | CGGWCCG | 1 cut(s) | 207 |
| RsrII | CGGWCCG | 1 cut(s) | 207 |
| SaqAI | TTAA | 7 cut(s) | 317, 360, 692, 737, 879, 1194, 1205 |
| SatI | GCNGC | 5 cut(s) | 59, 194, 492, 859, 1032 |
| Sau3AI | GATC | 2 cut(s) | 348, 1075 |
| Sau96I | GGNCC | 2 cut(s) | 207, 277 |
| SchI | GAGTC | 2 cut(s) | 116, 720 |
| ScrFI | CCNGG | 1 cut(s) | 519 |
| SduI | GDGCHC | 2 cut(s) | 524, 1230 |
| SfaNI | GCATC | 8 cut(s) | 120, 444, 552, 597, 612, 641, 984, 1210 |
| SfoI | GGCGCC | 1 cut(s) | 80 |
| SgsI | GGCGCGCC | 1 cut(s) | 54 |
| SinI | GGWCC | 1 cut(s) | 207 |
| SmlI | CTYRAG | 4 cut(s) | 338, 359, 950, 1204 |
| SmoI | CTYRAG | 4 cut(s) | 338, 359, 950, 1204 |
| Sse9I | AATT | 5 cut(s) | 29, 734, 782, 1050, 1240 |
| SseBI | AGGCCT | 1 cut(s) | 551 |
| SsiI | CCGC | 6 cut(s) | 59, 295, 491, 600, 630, 1104 |
| SspDI | GGCGCC | 1 cut(s) | 78 |
| SspMI | CTAG | 3 cut(s) | 162, 651, 969 |
| StuI | AGGCCT | 1 cut(s) | 551 |
| StyD4I | CCNGG | 1 cut(s) | 517 |
| StyI | CCWWGG | 2 cut(s) | 991, 1233 |
| TaaI | ACNGT | 6 cut(s) | 104, 207, 467, 479, 868, 1132 |
| TaiI | ACGT | 6 cut(s) | 75, 387, 854, 909, 1251, 1256 |
| TaqI | TCGA | 4 cut(s) | 14, 351, 404, 605 |
| TasI | AATT | 5 cut(s) | 29, 734, 782, 1050, 1240 |
| TauI | GCSGC | 2 cut(s) | 61, 494 |
| TfiI | GAWTC | 4 cut(s) | 230, 311, 440, 926 |
| Tru1I | TTAA | 7 cut(s) | 317, 360, 692, 737, 879, 1194, 1205 |
| Tru9I | TTAA | 7 cut(s) | 317, 360, 692, 737, 879, 1194, 1205 |
| TscAI | CASTG | 3 cut(s) | 49, 257, 1047 |
| TseFI | GTSAC | 3 cut(s) | 461, 1126, 1249 |
| TseI | GCWGC | 3 cut(s) | 193, 858, 1031 |
| Tsp45I | GTSAC | 3 cut(s) | 461, 1126, 1249 |
| TspDTI | ATGAA | 2 cut(s) | 428, 885 |
| TspGWI | ACGGA | 2 cut(s) | 115, 864 |
| TspRI | CASTG | 3 cut(s) | 49, 257, 1047 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 534 |
| Vha464I | CTTAAG | 2 cut(s) | 359, 1204 |
| VneI | GTGCAC | 1 cut(s) | 1226 |
| VpaK11BI | GGWCC | 1 cut(s) | 207 |
| VspI | ATTAAT | 2 cut(s) | 317, 737 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1207 |
| XapI | RAATTY | 1 cut(s) | 1240 |
| XbaI | TCTAGA | 1 cut(s) | 650 |
| XmnI | GAANNNNTTC | 1 cut(s) | 892 |
| XspI | CTAG | 3 cut(s) | 162, 651, 969 |
| Zsp2I | ATGCAT | 1 cut(s) | 820 |