pycom808g00590

Maspardin-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00000808
Physical Location & Seq
Forward (+)
370873 .. 373434
2562 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom808g00590.2

Sequence Viewer

Length: 1902 bp
ATGAGCGAATTGAAGAATCAAATGGGAGAAATTGCGGAATTCATAGGGCAAATGCAAGAACAAAGTGAACTATCTGACTCAACTATTGAAACTGTTGAAGCTATCACCTTGGAAAGTGGCATGGAGGTTGGAGATGAACCCAAGACGTCCAAACCAAGCCAAAAGATGGATGAACAGGAAGAACCACCCTTGTCGCAGCCACATATGCCTTCTATGCCATCCACTACAACAAAGGTAAGCCCCAAATTCAATTTGATCATGCAATCCAAGGAAGAAGAAGGTGAGAAAGGCATATTCGAAACCTTCCCAAAGAATCAAGAGCAAGATGTGCCTGGGGAATGTCTAGAATTCATTAAAGAAGATATACTTGAGACAACAATTCCCAAAGAAGTTGGATTTTATAACACGGGACAAATCATAACTCTCAAACCACCAAATCTGGCTGAATTTTGTAGTCCTACAACTTTCGAAGGGGTGTTTATTCTTGTGTTCATGTTGGAGCACACAGGTAAACCACCTCCCCGAATTTCAATTTTGCTTTATACTAATATGTTGTTGATGATTCAGGCACCCACTCAAGAATTTAAACCATTGCCGGATCATTTCAAGTATCACTTCCCATTCATAGATCAATTCCATGCCATGGGATATAGGGGAGAATCTCTAACACTTCACAACAAGATTTGCATTCTTAAACCCTACTCTTTATTGCTTTTACTTTGCCATGATTGCCATGTTTGTTATGAGGACAATGTTTGGTTTAAGTGTGGAAGGGGGGTAAACAAACTGTTTTTGCATAATTTTTGTGGGATTTTATCACCTATCACTTTTAATAGAAAATCCGAAAATTTGAAAGAAAAAAAAAACGAAAAAAGAGTGTTTAAAAAACCCAAAAAGAGTTGTTTTTGTTTTTATGTTTGTTTGTGTCTTAGGATACATTCGAACACAATGATGAAGATTTGGTTTTTAATTGCATACCTATTAAAGAAAGTTACAAACATGGATGGAAGTTTAGCGTCCCAAAGAAAGAAAGAATTAGGCATGGGAAAGGAAAAAAAAAAAATCATGAAAAAGGAAAAAGAAGAAGAAGAAGAAAAGATGAAGAAAAAGAAAAAGAAGTTGAAAATAAGTGAGAATGAACTCACAAGAGTTGATGTTGTTCTAAGTGCTTATTTCATTACTTTGCTTACTATTGCTTTAAGAACTTTTGTTTATCCTTACCTTTCTTTGTTAGCCAATACCTTAGCCCCGTTACAACCCTTAGACTTCTATCTCGATTGTTATGTGTTTCAATATATGGAGTTTAAAATTGGTTTGAGCATATGGTATCCCTGGTTCTCACGTCTAAGTAGTGGCATTCCATTCATGAGATCATATACATTATTAGTCTACATGTTTACATCAATCTTCTCACATATACTTAGTGTAGGGAGTGAATTGAGGAATTCTCTAAGGCATGTTACCACATTCAAAATCATGGTTAAGTATATGCTAAAGGGTGATGTTGCATTGGAAATCCCTGAGGTAAATGTTGGAAGGTCTAGGTTATGCTTTGTTTGTTTTGAGCATATTTATGTGACTTTGTTAGCTTGTTTCTTTGCATTTAGTAAGTTAGTTTCTATTTATTATAGTGTTTTAAGCTATTTTTGTGTGTTTGTAGGTTTAAATGACAAAGTTGGCAAGAAAGTGCAATTTGGTGCTATTTGGAGCAGTTTTGGGCTTGGAATGGATTGCATATGCATGGAGCAAGGTGGATGGATGAATTTGACGATCAAGAGAGAAGGAATATTATCCAAATTACCTTATCTTATCCAAACCTTATCCAACCTTATCTTATCTTATCCTACCCTAATCTTTTCCTACCTTAATTCCAGCTTCAAAGAGGACTCCTTTTCACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

634

Amino Acids

73.11

Weight (kDa)

8.42

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000120)

Species Orthologous Gene IDs
malus_domestica MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 402
AatII GACGTC 1 cut(s) 149
AccB1I GGYRCC 1 cut(s) 568
AccB7I CCANNNNNTGG 2 cut(s) 166, 643
AccI GTMKAC 1 cut(s) 1389
AciI CCGC 1 cut(s) 35
AclWI GGATC 1 cut(s) 606
AcsI RAATTY 9 cut(s) 38, 245, 347, 446, 525, 581, 847, 1444, 1762
AcyI GRCGYC 1 cut(s) 146
AfiI CCNNNNNNNGG 2 cut(s) 166, 643
AflIII ACRYGT 1 cut(s) 1392
AjiI CACGTC 1 cut(s) 1343
AjnI CCWGG 2 cut(s) 331, 1331
AluBI AGCT 4 cut(s) 101, 1589, 1641, 1875
AluI AGCT 4 cut(s) 101, 1589, 1641, 1875
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 1 cut(s) 365
AlwI GGATC 1 cut(s) 606
ApeKI GCWGC 1 cut(s) 196
ApoI RAATTY 9 cut(s) 38, 245, 347, 446, 525, 581, 847, 1444, 1762
AsuHPI GGTGA 4 cut(s) 97, 293, 810, 1511
AsuII TTCGAA 3 cut(s) 297, 468, 941
AxyI CCTNAGG 1 cut(s) 1521
BanI GGYRCC 1 cut(s) 568
Bbv12I GWGCWC 1 cut(s) 504
BbvI GCAGC 1 cut(s) 208
BccI CCATC 4 cut(s) 160, 226, 998, 1749
BciT130I CCWGG 2 cut(s) 333, 1333
BciVI GTATCC 2 cut(s) 927, 1338
BclI TGATCA 1 cut(s) 255
BcoDI GTCTC 1 cut(s) 365
BfaI CTAG 2 cut(s) 344, 1542
BfuI GTATCC 2 cut(s) 927, 1338
BisI GCNGC 1 cut(s) 197
BlsI GCNGC 1 cut(s) 198
Bme1390I CCNGG 2 cut(s) 333, 1333
BmgBI CACGTC 1 cut(s) 1343
BmiI GGNNCC 1 cut(s) 570
BmrFI CCNGG 2 cut(s) 333, 1333
BplI GAGNNNNNCTC 2 cut(s) 1432, 1464
Bpu10I CCTNAGC 1 cut(s) 1243
Bpu14I TTCGAA 3 cut(s) 297, 468, 941
BpuEI CTTGAG 2 cut(s) 389, 561
BsaHI GRCGYC 1 cut(s) 146
BsaJI CCNNGG 5 cut(s) 108, 267, 332, 642, 1331
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 643
Bse21I CCTNAGG 1 cut(s) 1521
Bse3DI GCAATG 1 cut(s) 590
BseBI CCWGG 2 cut(s) 333, 1333
BseDI CCNNGG 5 cut(s) 108, 267, 332, 642, 1331
BseGI GGATG 5 cut(s) 175, 218, 1009, 1760, 1764
BseLI CCNNNNNNNGG 2 cut(s) 166, 643
BseMI GCAATG 1 cut(s) 590
BseMII CTCAG 1 cut(s) 1512
BseXI GCAGC 1 cut(s) 208
BshNI GGYRCC 1 cut(s) 568
BsiHKAI GWGCWC 1 cut(s) 504
BsiSI CCGG 1 cut(s) 596
BslFI GGGAC 2 cut(s) 423, 1003
BslI CCNNNNNNNGG 2 cut(s) 166, 643
BsmAI GTCTC 1 cut(s) 365
BsmFI GGGAC 2 cut(s) 423, 1003
BsmI GAATGC 2 cut(s) 687, 1356
Bsp119I TTCGAA 3 cut(s) 297, 468, 941
Bsp1286I GDGCHC 1 cut(s) 504
Bsp143I GATC 5 cut(s) 255, 598, 628, 1370, 1770
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 1 cut(s) 35
BspCNI CTCAG 1 cut(s) 1513
BspHI TCATGA 2 cut(s) 1065, 1365
BspLI GGNNCC 1 cut(s) 570
BspPI GGATC 1 cut(s) 606
BspT104I TTCGAA 3 cut(s) 297, 468, 941
BspT107I GGYRCC 1 cut(s) 568
BsrDI GCAATG 1 cut(s) 590
BssECI CCNNGG 5 cut(s) 108, 267, 332, 642, 1331
BssMI GATC 5 cut(s) 255, 598, 628, 1370, 1770
BssNI GRCGYC 1 cut(s) 146
BssT1I CCWWGG 3 cut(s) 108, 267, 642
Bst2UI CCWGG 2 cut(s) 333, 1333
Bst4CI ACNGT 2 cut(s) 94, 789
BstACI GRCGYC 1 cut(s) 146
BstAPI GCANNNNNTGC 1 cut(s) 328
BstBI TTCGAA 3 cut(s) 297, 468, 941
BstDEI CTNAG 8 cut(s) 929, 1163, 1243, 1261, 1346, 1421, 1451, 1521
BstDSI CCRYGG 1 cut(s) 642
BstF5I GGATG 5 cut(s) 175, 218, 1009, 1760, 1764
BstKTI GATC 5 cut(s) 258, 601, 631, 1373, 1773
BstMAI GTCTC 1 cut(s) 365
BstMBI GATC 5 cut(s) 255, 598, 628, 1370, 1770
BstMWI GCNNNNNNNGC 4 cut(s) 205, 214, 328, 729
BstNI CCWGG 2 cut(s) 333, 1333
BstNSI RCATGY 2 cut(s) 1396, 1460
BstSCI CCNGG 2 cut(s) 331, 1331
BstV1I GCAGC 1 cut(s) 208
Bsu36I CCTNAGG 1 cut(s) 1521
BsuI GTATCC 2 cut(s) 927, 1338
BtgI CCRYGG 1 cut(s) 642
BtrI CACGTC 1 cut(s) 1343
BtsCI GGATG 5 cut(s) 175, 218, 1009, 1760, 1764
CciI TCATGA 2 cut(s) 1065, 1365
CseI GACGC 1 cut(s) 1005
DdeI CTNAG 8 cut(s) 929, 1163, 1243, 1261, 1346, 1421, 1451, 1521
DpnI GATC 5 cut(s) 257, 600, 630, 1372, 1772
DpnII GATC 5 cut(s) 255, 598, 628, 1370, 1770
DraI TTTAAA 4 cut(s) 586, 883, 1306, 1665
Eco130I CCWWGG 3 cut(s) 108, 267, 642
Eco81I CCTNAGG 1 cut(s) 1521
EcoRI GAATTC 3 cut(s) 38, 347, 1444
EcoRII CCWGG 2 cut(s) 331, 1331
EcoT14I CCWWGG 3 cut(s) 108, 267, 642
EcoT22I ATGCAT 1 cut(s) 1742
ErhI CCWWGG 3 cut(s) 108, 267, 642
FalI AAGNNNNNCTT 4 cut(s) 351, 383, 599, 631
FaqI GGGAC 2 cut(s) 423, 1003
FauNDI CATATG 3 cut(s) 204, 1322, 1736
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 1 cut(s) 1389
Fnu4HI GCNGC 1 cut(s) 197
FokI GGATG 5 cut(s) 182, 205, 1016, 1767, 1771
Fsp4HI GCNGC 1 cut(s) 197
FspBI CTAG 2 cut(s) 344, 1542
GluI GCNGC 1 cut(s) 197
HapII CCGG 1 cut(s) 596
HgaI GACGC 1 cut(s) 1005
Hin1I GRCGYC 1 cut(s) 146
HinfI GANTC 6 cut(s) 16, 77, 313, 562, 659, 1886
HpaII CCGG 1 cut(s) 596
HphI GGTGA 4 cut(s) 97, 293, 810, 1511
Hpy166II GTNNAC 5 cut(s) 68, 512, 781, 1390, 1398
Hpy188I TCNGA 2 cut(s) 76, 844
Hpy188III TCNNGA 7 cut(s) 317, 344, 578, 1066, 1274, 1366, 1774
Hpy8I GTNNAC 5 cut(s) 68, 512, 781, 1390, 1398
HpyAV CCTTC 7 cut(s) 219, 272, 313, 464, 765, 1530, 1775
HpyCH4III ACNGT 2 cut(s) 94, 789
HpyCH4IV ACGT 2 cut(s) 146, 1342
HpyF10VI GCNNNNNNNGC 4 cut(s) 205, 214, 328, 729
HpyF3I CTNAG 8 cut(s) 929, 1163, 1243, 1261, 1346, 1421, 1451, 1521
HpySE526I ACGT 2 cut(s) 146, 1342
Hsp92I GRCGYC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 5 cut(s) 255, 598, 628, 1370, 1770
LmnI GCTCC 3 cut(s) 499, 1707, 1744
Lsp1109I GCAGC 1 cut(s) 208
MaeI CTAG 2 cut(s) 344, 1542
MaeII ACGT 2 cut(s) 146, 1342
MaeIII GTNAC 4 cut(s) 991, 1251, 1459, 1576
MalI GATC 5 cut(s) 257, 600, 630, 1372, 1772
MboI GATC 5 cut(s) 255, 598, 628, 1370, 1770
MhlI GDGCHC 1 cut(s) 504
MlyI GAGTC 2 cut(s) 71, 1880
MmeI TCCRAC 5 cut(s) 109, 373, 477, 1513, 1848
MnlI CCTC 6 cut(s) 118, 528, 739, 1434, 1516, 1876
Mph1103I ATGCAT 1 cut(s) 1742
MslI CAYNNNNRTG 3 cut(s) 950, 1572, 1739
MspI CCGG 1 cut(s) 596
MspR9I CCNGG 2 cut(s) 333, 1333
Mva1269I GAATGC 2 cut(s) 687, 1356
MvaI CCWGG 2 cut(s) 333, 1333
MwoI GCNNNNNNNGC 4 cut(s) 205, 214, 328, 729
NcoI CCATGG 1 cut(s) 642
NdeI CATATG 3 cut(s) 204, 1322, 1736
NdeII GATC 5 cut(s) 255, 598, 628, 1370, 1770
NlaIV GGNNCC 1 cut(s) 570
NmuCI GTSAC 1 cut(s) 1576
NsiI ATGCAT 1 cut(s) 1742
NspI RCATGY 2 cut(s) 1396, 1460
NspV TTCGAA 3 cut(s) 297, 468, 941
PagI TCATGA 2 cut(s) 1065, 1365
PciI ACATGT 1 cut(s) 1392
PctI GAATGC 2 cut(s) 687, 1356
PfeI GAWTC 4 cut(s) 16, 313, 562, 659
PflMI CCANNNNNTGG 2 cut(s) 166, 643
PkrI GCNGC 1 cut(s) 198
PleI GAGTC 2 cut(s) 71, 1880
PpsI GAGTC 2 cut(s) 71, 1880
PscI ACATGT 1 cut(s) 1392
PsiI TTATAA 1 cut(s) 402
Psp6I CCWGG 2 cut(s) 331, 1331
PspGI CCWGG 2 cut(s) 331, 1331
PspN4I GGNNCC 1 cut(s) 570
PsrI GAACNNNNNNTAC 2 cut(s) 1319, 1351
RseI CAYNNNNRTG 3 cut(s) 950, 1572, 1739
SatI GCNGC 1 cut(s) 197
Sau3AI GATC 5 cut(s) 255, 598, 628, 1370, 1770
SchI GAGTC 2 cut(s) 71, 1880
ScrFI CCNGG 2 cut(s) 333, 1333
SduI GDGCHC 1 cut(s) 504
SfuI TTCGAA 3 cut(s) 297, 468, 941
SmiMI CAYNNNNRTG 3 cut(s) 950, 1572, 1739
SmlI CTYRAG 2 cut(s) 368, 576
SmoI CTYRAG 2 cut(s) 368, 576
SsiI CCGC 1 cut(s) 35
SspI AATATT 1 cut(s) 1788
SspMI CTAG 2 cut(s) 344, 1542
StyD4I CCNGG 2 cut(s) 331, 1331
StyI CCWWGG 3 cut(s) 108, 267, 642
TaaI ACNGT 2 cut(s) 94, 789
TaiI ACGT 2 cut(s) 149, 1345
TaqI TCGA 4 cut(s) 297, 468, 941, 1275
TfiI GAWTC 4 cut(s) 16, 313, 562, 659
TseFI GTSAC 1 cut(s) 1576
TseI GCWGC 1 cut(s) 196
Tsp45I GTSAC 1 cut(s) 1576
Van91I CCANNNNNTGG 2 cut(s) 166, 643
XapI RAATTY 9 cut(s) 38, 245, 347, 446, 525, 581, 847, 1444, 1762
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 2 cut(s) 1396, 1460
XmiI GTMKAC 1 cut(s) 1389
XspI CTAG 2 cut(s) 344, 1542
ZraI GACGTC 1 cut(s) 147
Zsp2I ATGCAT 1 cut(s) 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.