pycom12659g00070

Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012659
Physical Location & Seq
Forward (+)
208635 .. 214445
5811 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12659g00070.31

Sequence Viewer

Length: 4248 bp
ATGATTTTCGTGGGATTTTATCACCTATCACTTCTAATGTTGTTTCTCACTGTTTTTAACAGAAAATATGAAAATGTACAAAAAAAAATTTGCAAAATAGTTTTGAAAAACCCAAAAAGAGGTACCTTCCAACACAATGATGAGGATTTAGTTTTTAATTGCATGATTATTAAAGAAAGTTACAAACATGGATGGAAGTTTGATTTACTCTTTGGTTTATGCTTGGTTATAGTTATAGTTTACGAATTCACATGTAATCACGAAGAGAAAATCAGTTTTTGTAACATTTCTTGTTTTCTAAAGTTGTTGCATGATCGATCATCATTCTTTGCTTGGTTGCTACTTAGAATGCATTTCATCATTATAGTTCCAAATACTAGAACTCATGCCCATTTCATTCAAAGCATGATTTTGATTCCAAAAAGCCGATCCCTTTTGCATATGTATTGTAGGGTAACACTTTTGAGCCATTTCAAATTAGGACTTTCCATACCCTTGTTCTTAAAGGATAGTGAAAAAATAAGTGTGGGGGAAGGTAATAGGGCATGGCAAAGAAAGAAAATAAAGAAAAAAATTTGTGCAAAAAGAAAAAGAAAAGAGAAAGGTTGTAAAAAGAAAGGAAAAGAGGTCCAAAAGTTTGAATTTGACCCTAAATGTTCAAAAGTGAGTTTAAGTGTCAATTTCATTACTTTGCTTCCTATTGCTTTAAGAACCTTTGTTTATCCATTACCCTTGTTTGTTAGCCAATACCTTAGCCTCATTGCAACCCTCAACTTCTATCTTGATGTTATGTCACTGGTTCTTGTTCTAAGTCATAGCATTCCATTCATGAGATCATATACATGTCATTGTCATAATTCCAGAAAATGCTTTCCTTGTTATAACATATGTGAAGAGCATTCTAGTGAGGAATTGAGGGAATTCTCTAAGGCATGTTACTACATTCAAAATGTTCCAAAAACCGTGGGAATGATTTTCTTTGATGTGTCATGTTCATTGGAAATCTCTGAGGTACATGTTGGAAGGTCTAGAGTTTGTTTCGTTTTGTTTGTTTGTTTTGATTTGTTTTGCTCGAGGACTAGCAAAAGCCAAGTGTGGGGGAATTTGATAGGAGCATATTTAGTTCATAGTTATTTTAGTAGTTTAAGCTATTTTCGTGTGTTTATAGGTTCATATGGTCAAGGAAGCAAAAAGGTGCATTTTGGAGCATTTTGGAGAATGGACGAAATTGAAGACCTAAAGATGTTAGGATTCCTAATCAAAGAAGGATTCTTAATCAAAAGTGGAATCCTAGTTTCCTATTTTGGATCGATCTTTCCTAATCCTAAAAGACCTTATGTTCCAGCAACATTGAAGACTCTTATGCATTTTAGGACACAAACAAAGCCTTCCTTGCACCCTTATGGTCCTTGCCGTGGCATACATCACACTCTACTTCCTTGCCATGCAAGGGAAGTACCTATTTCCCATTTTATGTCACAAAATCACATTCCTCTTTCACCCCATTCTCAGCCGCATCTTACATACCTTTTCTATCCTAAATCCTGCCTAATTTCATTTCCTTCCCTTTTCCCTTTGATTTCTGATTTTAAGTCTCATTTTCCTTATGGATTTGAACCAATAGCCACACCCTTATTCAACCGTAATCACTCTCACACACAATCTGCCATCATTCACAGAAACAAGTCTTTTTGTCGCAGCCTTCAACCCATCTTTCTACCATTCTCCTACTTCCATACCTTCACCCAAACACCCATACACCATCCCCAACCTTTAAATTCATCAAAAATCACCCCTAGACTCTTGTGCCGCAGCTTTGCAAGGAAAAAGAAGAGAAGAAGAAGCCTTGGACGTTTGTACATTCAAGTTGGAGTGTTGGAACTCAATTTTCCTTTGTTTTGTTGTGAACATGAGAGGCTAAACTCGTTTTATAATTCCAGTTGTGATTTCATAAATTTTGAATGCAATTTACTTAACCTTGCATGCTTGAATTTGGTGCTAGAAATAAGGGAGTTTCACATAATCAATACAAACTTATATTCACAAGTAGTTAAGTATCATGATGTCACAGTTACAAGTGCTTTGTCAATGCTTATGATTTTCATAGAATGCCCCTTTGATTTAGTCTTATTATTTGAGTCAAAATCTGTTTTCTTTGAGTCTTTTGAGTCAATCTTTTTTATTGTTTTGTGTTGTTTTGAGTCTTTTTATAGATTAGCATCCCTTCTAATCCCCGGCCTAAAACGATCCCTACTTTCATATCAACTTTTGGCGCCGTTGCCGGAGATTAGTAAAATTGCTAATCCCTCTGTTTGTTTGTTTATTTTTCTTTTGATATTTGATTTAGTTTTATTTCTTCGATTTCAGGTACTAGAGAAGCAAGACATGGCAATTGCTAATCTTCAAGCTCAAATAGCGAATCTTACTTCTCAGTTGTCACAATATGCCAAAGGGTCCACAATGCAAAGTCAAATCAATGTCCACAAAGAAGTTGGGAGAATGTCAATACCTGGGGTTATCAAGATCATAATCAATCAAGGAAGAATTTGTTTTCCAACATGTACAATTCAGATTAGATCGATCATTCAAACTCTATGCGGTGGGAATCTCAACAAGTTCAACACGAAGGATATTGGTAGCCATATGAGGAGTTCTATTCAACGCCTATGTAGCCACCACAACCTTATATACAATATTCTTGATGAATTAATTTCTTTGGTGCAGGGCTCACAAAACCAAGCCAAGGCGGCTCAACAAGGAGAATATTGGCAGCCATATGAGGAGTTCTATACAACACCTATGCAGCCACCTCGGCCTCCCCCACAACAATACCAACTGAATTCAGGTTCGTCAATAGATTGTGCTCAAATTCTTGATATACTAACTTCTTTGACAATCAAATGGGAGAGATCGCGGAATTCATGGGGCAAATGCAAGAACAAAGTGAACTATCCGACTCAACTGTTGAAATTGCTAAAGCTATCACCTTGGAAAGTGGCATGGAGGTTGGAGATAAACCCAAGACGTCCAAACCAAGCCAAAATATGGATGAACAGCTGCTGGTCGAAGAAGAGGAGGATAACAAGGCCACAGCAAGGGAAGAACCAACCTTATGCCCTCTATGTCGTCCACTACAAACAAGGTAAGCCTAATTCAATTCTTCCTAACCCCATTCCACCAAATGTCCCTATTCCATACAGGTTCATGATTTTCAAGAAAGAAGAGAGTCAAAAAGACATCTTGGAAGCCCTTCCAAAGGTGCAAAGAAATCAAGTTCCAGAATGTGTTGAATTGTCCAAAGAACTTTGTACAACAAGAAGAATGATTCAAGAGAAAGAAGTGGCTGGGGAATGTCTAGAATTCATCAAAGAGGATATACTTGAGACAACAATTCCCAAAGAAGTTGGATTTTATGACATTGGACAAGTCATAACTCTCAAAACACCAAATCTGGTTGAATTTTCTAGTCCTACAACTTTCGAAGGGGTGTTTATTTTTGATTTCATGTCGGAGCACACATGTAAGCCACCTCCCCGAATTTCAATTTTGTTTTATACTAATATTACCGGATCATCTCAAGTATCACCTCCCATTCAAACGCGATCGATCAATTCCATGCCATGGGACCTAGGGGAGCTTAAAAGGAGGCAACCCATGCATTCAAATAAAGAAGACCTAGGAATCTCCGACACCACAAGCAGATTTGTGTTCCTAAACCCTACTCTTTATTGCTTTTACTTTGCCATGATTGTCATGTTTGTTAGTTGTGTTGTTTCATTGTTTGCATGTGAGTTTTTGTTTGAAACATTGAGGACAATGTTTGGTTTAAGTGTGTGGGGGGGGGGGGTAAGCAAGCTGTTTTTGCATGATTTTCGTGGGATTTTATCACCTATCACTTCTAAAGTTGTTATTCACTGTTTTGAAGTGTTTTTAGTGTGTTTTGAAGTGTTTTTATGTGTCTTAAAAAGAAAATCCGAAAATTTGAAAAAAAAATTAAAAAAAGAGTGTTTTAAAAACCCAAAGAAAGAGTTGTTTTTAGAGTCGTTTTTGTTTTATGATTTGGTTTTTAATTGCATGACTATTAAAGAAAGTTACAAACGTGGATGGAAGTTTGATATGCTCTTTGGTTTATACTTAGTTGTAGTTGACATTTACAAATTCACATGTAATCACAAAGGAAAAAATCAATTTTTACTTGAGCCTAAACTTTATTTGGAGAGTATTAATCTTGATGTTCTTGTTTTCTAA

Protein Analysis

1416

Amino Acids

164.34

Weight (kDa)

9.34

Isoelectric Point (pI)

48.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000120)

Species Orthologous Gene IDs
malus_domestica MD00G1178700.v1.1 MD00G1192600.v1.1 MD01G1178800.v1.1 MD08G1118400.v1.1 MD11G1121800.v1.1 MD11G1175900.v1.1 MD14G1073500.v1.1 MD16G1171800.v1.1
prunus_persica Prupe.5G057200_v2.0.a1 Prupe.7G095400_v2.0.a1 Prupe.7G095500_v2.0.a1 Prupe.8G037200_v2.0.a1
pyrus_communis pycom01g00040 pycom01g00270 pycom01g00550 pycom01g00730 pycom01g00740 pycom01g00820 pycom01g00960 pycom01g01060 pycom01g01180 pycom01g01580 pycom01g01700 pycom01g01770 pycom01g01970 pycom01g02520 pycom01g03120 pycom01g03510 pycom01g07770 pycom01g07800 pycom01g11420 pycom02g06240 pycom02g13440 pycom02g16920 pycom02g17900 pycom02g18220 pycom02g21560 pycom03g10720 pycom03g11710 pycom03g11930 pycom04g05770 pycom04g07600 pycom04g07920 pycom04g07980 pycom04g08250 pycom04g09780 pycom04g12720 pycom04g13700 pycom05g00180 pycom05g01110 pycom05g05940 pycom05g06250 pycom05g06870 pycom05g08470 pycom05g08920 pycom05g09050 pycom05g09420 pycom05g14090 pycom06g05150 pycom06g05430 pycom06g06950 pycom06g09990 pycom06g15520 pycom07g08780 pycom07g11240 pycom07g11990 pycom07g14400 pycom07g27820 pycom08g07740 pycom08g10980 pycom08g12370 pycom09g03580 pycom09g09700 pycom09g13450 pycom09g14910 pycom10g01230 pycom10g02170 pycom10g06850 pycom10g08040 pycom10g08250 pycom10g10100 pycom10g15420 pycom1125g00010 pycom11g04190 pycom11g14150 pycom11g15090 pycom11g15720 pycom11g16230 pycom11g17180 pycom11g20110 pycom1236g00020 pycom12426g00290 pycom12426g00350 pycom12426g00660 pycom12426g00700 pycom12462g00070 pycom12463g00060 pycom12473g00010 pycom12503g00010 pycom12517g00150 pycom1256g00180 pycom1256g00220 pycom12575g00030 pycom12581g00010 pycom12596g00090 pycom12612g00020 pycom12621g00090 pycom12633g00040 pycom12637g00020 pycom12658g00010 pycom12658g00020 pycom12659g00070 pycom12668g00040 pycom12668g00050 pycom12674g00040 pycom12681g00050 pycom12681g00060 pycom12690g00020 pycom12695g00020 pycom12g08040 pycom12g08660 pycom12g09550 pycom12g09560 pycom13g03230 pycom13g18200 pycom13g19230 pycom13g20140 pycom13g20700 pycom13g22210 pycom13g23170 pycom13g25290 pycom13g25590 pycom13g25980 pycom13g26010 pycom13g26280 pycom13g26350 pycom13g27560 pycom13g27570 pycom13g27680 pycom13g27780 pycom13g28070 pycom13g28140 pycom13g28230 pycom13g28280 pycom13g29100 pycom1498g00010 pycom14g01730 pycom14g08250 pycom14g08660 pycom14g09260 pycom14g18640 pycom15g28640 pycom15g30060 pycom15g35030 pycom15g37780 pycom1604g00160 pycom1609g00100 pycom1681g00030 pycom1683g00020 pycom16g13500 pycom16g17920 pycom16g18140 pycom16g19340 pycom16g20200 pycom16g21370 pycom16g22140 pycom16g23170 pycom16g23450 pycom16g25040 pycom16g25790 pycom1729g00130 pycom1729g00180 pycom1739g00060 pycom1774g00010 pycom17g06230 pycom17g15230 pycom17g16620 pycom17g17340 pycom17g17660 pycom17g17810 pycom17g18150 pycom17g19280 pycom17g25050 pycom17g25100 pycom17g25680 pycom17g25690 pycom1880g00030 pycom1912g00020 pycom2002g00120 pycom2002g00160 pycom2177g00180 pycom2185g00070 pycom2189g00010 pycom2218g00030 pycom2320g00010 pycom2328g00040 pycom2339g00100 pycom2424g00030 pycom2466g00010 pycom2552g00010 pycom2599g00010 pycom2627g00040 pycom2749g00080 pycom2789g00010 pycom3027g00010 pycom394g00080 pycom436g00190 pycom436g00310 pycom436g00350 pycom436g00410 pycom436g00420 pycom436g00430 pycom443g00010 pycom505g00030 pycom520g00140 pycom520g00220 pycom520g00620 pycom520g00650 pycom555g00010 pycom57g00030 pycom608g00020 pycom723g00040 pycom775g00040 pycom808g00350 pycom808g00590 pycom808g00640 pycom889g00030 pycom908g00040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 882, 1932
AatII GACGTC 1 cut(s) 3028
Acc65I GGTACC 1 cut(s) 122
AccB1I GGYRCC 2 cut(s) 122, 2272
AccB7I CCANNNNNTGG 2 cut(s) 3045, 3621
AccII CGCG 2 cut(s) 2914, 3601
AciI CCGC 5 cut(s) 1514, 1810, 2598, 2747, 2914
AclWI GGATC 4 cut(s) 423, 1315, 2241, 3577
AcyI GRCGYC 2 cut(s) 2273, 3025
AfaI GTAC 8 cut(s) 78, 124, 1014, 1458, 1859, 2370, 2563, 3310
AfiI CCNNNNNNNGG 9 cut(s) 119, 1096, 1415, 1450, 2743, 3045, 3095, 3256, 3621
AflIII ACRYGT 6 cut(s) 251, 842, 1015, 2558, 3518, 4163
AjnI CCWGG 1 cut(s) 2509
AluBI AGCT 7 cut(s) 1149, 1815, 2408, 2980, 3057, 3637, 3856
AluI AGCT 7 cut(s) 1149, 1815, 2408, 2980, 3057, 3637, 3856
Alw21I GWGCWC 2 cut(s) 2866, 3516
Alw26I GTCTC 2 cut(s) 1599, 3377
AlwI GGATC 4 cut(s) 423, 1315, 2241, 3577
AlwNI CAGNNNCTG 1 cut(s) 3060
Ama87I CYCGRG 1 cut(s) 1072
AoxI GGCC 3 cut(s) 2236, 2813, 3086
ApeKI GCWGC 5 cut(s) 1698, 1812, 2770, 2803, 3057
AseI ATTAAT 2 cut(s) 2708, 4224
Asp700I GAANNNNTTC 1 cut(s) 3249
Asp718I GGTACC 1 cut(s) 122
AspA2I CCTAGG 2 cut(s) 3628, 3676
AspLEI GCGC 1 cut(s) 2275
AspS9I GGNCC 4 cut(s) 628, 1406, 2454, 3625
AsuC2I CCSGG 1 cut(s) 2235
AsuHPI GGTGA 7 cut(s) 14, 1491, 1735, 1783, 2976, 3576, 3879
AsuII TTCGAA 1 cut(s) 3480
AvaI CYCGRG 1 cut(s) 1072
AvaII GGWCC 4 cut(s) 628, 1406, 2454, 3625
AvrII CCTAGG 2 cut(s) 3628, 3676
BanI GGYRCC 2 cut(s) 122, 2272
BanII GRGCYC 1 cut(s) 2729
BbsI GAAGAC 3 cut(s) 1239, 1361, 3678
Bbv12I GWGCWC 2 cut(s) 2866, 3516
BbvI GCAGC 5 cut(s) 1710, 1824, 2782, 2815, 3044
BccI CCATC 5 cut(s) 186, 1676, 1718, 1770, 4098
BceAI ACGGC 2 cut(s) 1398, 2260
BcgI CGANNNNNNTGC 4 cut(s) 2792, 2826, 3854, 3888
BciT130I CCWGG 1 cut(s) 2511
BcnI CCSGG 1 cut(s) 2235
BcoDI GTCTC 2 cut(s) 1599, 3377
BfoI RGCGCY 1 cut(s) 2276
BglI GCCNNNNNGGC 2 cut(s) 2747, 2812
BisI GCNGC 8 cut(s) 1514, 1699, 1810, 1813, 2748, 2771, 2804, 3058
BlnI CCTAGG 2 cut(s) 3628, 3676
BlsI GCNGC 8 cut(s) 1515, 1700, 1811, 1814, 2749, 2772, 2805, 3059
Bme1390I CCNGG 2 cut(s) 2235, 2511
Bme18I GGWCC 4 cut(s) 628, 1406, 2454, 3625
BmeT110I CYCGRG 1 cut(s) 1072
BmgT120I GGNCC 4 cut(s) 628, 1406, 2454, 3625
BmiI GGNNCC 4 cut(s) 124, 2274, 2455, 3626
BmrFI CCNGG 2 cut(s) 2235, 2511
BmsI GCATC 2 cut(s) 1525, 2228
BpiI GAAGAC 3 cut(s) 1239, 1361, 3678
Bpu10I CCTNAGC 1 cut(s) 752
Bpu14I TTCGAA 1 cut(s) 3480
BpuEI CTTGAG 3 cut(s) 3401, 3561, 4217
BpuMI CCSGG 1 cut(s) 2235
Bsa29I ATCGAT 4 cut(s) 316, 1310, 2579, 3605
BsaBI GATNNNNATC 2 cut(s) 2218, 2528
BsaHI GRCGYC 2 cut(s) 2273, 3025
BsaWI WCCGGW 1 cut(s) 3566
Bsc4I CCNNNNNNNGG 9 cut(s) 119, 1096, 1415, 1450, 2743, 3045, 3095, 3256, 3621
Bse1I ACTGG 2 cut(s) 801, 1938
Bse3DI GCAATG 1 cut(s) 759
Bse8I GATNNNNATC 2 cut(s) 2218, 2528
BseBI CCWGG 1 cut(s) 2511
BseCI ATCGAT 4 cut(s) 316, 1310, 2579, 3605
BseGI GGATG 5 cut(s) 197, 1762, 2219, 3054, 4109
BseJI GATNNNNATC 2 cut(s) 2218, 2528
BseLI CCNNNNNNNGG 9 cut(s) 119, 1096, 1415, 1450, 2743, 3045, 3095, 3256, 3621
BseMI GCAATG 1 cut(s) 759
BseMII CTCAG 3 cut(s) 999, 1523, 2444
BseNI ACTGG 2 cut(s) 801, 1938
BseRI GAGGAG 3 cut(s) 2662, 2795, 3088
BseXI GCAGC 5 cut(s) 1710, 1824, 2782, 2815, 3044
BseYI CCCAGC 1 cut(s) 3344
BsgI GTGCAG 1 cut(s) 2741
Bsh1236I CGCG 2 cut(s) 2914, 3601
Bsh1285I CGRYCG 1 cut(s) 3605
BshFI GGCC 3 cut(s) 2238, 2815, 3088
BshNI GGYRCC 2 cut(s) 122, 2272
BshVI ATCGAT 4 cut(s) 316, 1310, 2579, 3605
BsiEI CGRYCG 1 cut(s) 3605
BsiHKAI GWGCWC 2 cut(s) 2866, 3516
BsiHKCI CYCGRG 1 cut(s) 1072
BsiSI CCGG 3 cut(s) 2235, 2282, 3567
BslFI GGGAC 2 cut(s) 3170, 3638
BslI CCNNNNNNNGG 9 cut(s) 119, 1096, 1415, 1450, 2743, 3045, 3095, 3256, 3621
BsmAI GTCTC 2 cut(s) 1599, 3377
BsmFI GGGAC 2 cut(s) 3170, 3638
BsmI GAATGC 6 cut(s) 354, 819, 898, 1967, 2114, 3658
BsnI GGCC 3 cut(s) 2238, 2815, 3088
BsoBI CYCGRG 1 cut(s) 1072
Bsp119I TTCGAA 1 cut(s) 3480
Bsp1286I GDGCHC 3 cut(s) 2729, 2866, 3516
Bsp1407I TGTACA 4 cut(s) 76, 1857, 2561, 3308
Bsp19I CCATGG 1 cut(s) 3620
BspACI CCGC 5 cut(s) 1514, 1810, 2598, 2747, 2914
BspANI GGCC 3 cut(s) 2238, 2815, 3088
BspCNI CTCAG 3 cut(s) 1000, 1522, 2443
BspDI ATCGAT 4 cut(s) 316, 1310, 2579, 3605
BspFNI CGCG 2 cut(s) 2914, 3601
BspHI TCATGA 3 cut(s) 828, 2059, 3204
BspLI GGNNCC 4 cut(s) 124, 2274, 2455, 3626
BspPI GGATC 4 cut(s) 423, 1315, 2241, 3577
BspQI GCTCTTC 1 cut(s) 888
BspT104I TTCGAA 1 cut(s) 3480
BspT107I GGYRCC 2 cut(s) 122, 2272
BsrDI GCAATG 1 cut(s) 759
BsrGI TGTACA 4 cut(s) 76, 1857, 2561, 3308
BsrI ACTGG 2 cut(s) 801, 1938
BssNI GRCGYC 2 cut(s) 2273, 3025
BssT1I CCWWGG 6 cut(s) 1846, 2742, 2987, 3620, 3628, 3676
Bst2UI CCWGG 1 cut(s) 2511
Bst4CI ACNGT 6 cut(s) 52, 964, 1643, 2071, 2964, 3917
Bst6I CTCTTC 5 cut(s) 258, 888, 1826, 3065, 3216
BstACI GRCGYC 2 cut(s) 2273, 3025
BstAPI GCANNNNNTGC 1 cut(s) 3655
BstAUI TGTACA 4 cut(s) 76, 1857, 2561, 3308
BstBI TTCGAA 1 cut(s) 3480
BstC8I GCNNGC 2 cut(s) 1984, 3854
BstDEI CTNAG 8 cut(s) 344, 752, 809, 927, 1008, 1509, 2430, 4135
BstDSI CCRYGG 3 cut(s) 963, 1414, 3620
BstENI CCTNNNNNAGG 1 cut(s) 3254
BstF5I GGATG 5 cut(s) 197, 1762, 2219, 3054, 4109
BstFNI CGCG 2 cut(s) 2914, 3601
BstH2I RGCGCY 1 cut(s) 2276
BstHHI GCGC 1 cut(s) 2275
BstMAI GTCTC 2 cut(s) 1599, 3377
BstMCI CGRYCG 1 cut(s) 3605
BstMWI GCNNNNNNNGC 7 cut(s) 1393, 2414, 2670, 2747, 2812, 3655, 3862
BstNI CCWGG 1 cut(s) 2511
BstNSI RCATGY 9 cut(s) 255, 846, 936, 1019, 1986, 2562, 3522, 3789, 4167
BstSCI CCNGG 2 cut(s) 2233, 2509
BstUI CGCG 2 cut(s) 2914, 3601
BstV1I GCAGC 5 cut(s) 1710, 1824, 2782, 2815, 3044
BstV2I GAAGAC 3 cut(s) 1239, 1361, 3678
Bsu15I ATCGAT 4 cut(s) 316, 1310, 2579, 3605
BsuRI GGCC 3 cut(s) 2238, 2815, 3088
BsuTUI ATCGAT 4 cut(s) 316, 1310, 2579, 3605
BtgI CCRYGG 3 cut(s) 963, 1414, 3620
BtsCI GGATG 5 cut(s) 197, 1762, 2219, 3054, 4109
BtsIMutI CAGTG 3 cut(s) 48, 794, 3913
Cac8I GCNNGC 2 cut(s) 1984, 3854
CaiI CAGNNNCTG 1 cut(s) 3060
CciI TCATGA 3 cut(s) 828, 2059, 3204
CfoI GCGC 1 cut(s) 2275
Cfr13I GGNCC 4 cut(s) 628, 1406, 2454, 3625
ClaI ATCGAT 4 cut(s) 316, 1310, 2579, 3605
Csp6I GTAC 8 cut(s) 77, 123, 1013, 1457, 1858, 2369, 2562, 3309
CspCI CAANNNNNGTGG 2 cut(s) 945, 980
CviQI GTAC 8 cut(s) 77, 123, 1013, 1457, 1858, 2369, 2562, 3309
DdeI CTNAG 8 cut(s) 344, 752, 809, 927, 1008, 1509, 2430, 4135
DinI GGCGCC 1 cut(s) 2274
DraI TTTAAA 2 cut(s) 1776, 4012
Eam1104I CTCTTC 5 cut(s) 258, 888, 1826, 3065, 3216
EarI CTCTTC 5 cut(s) 258, 888, 1826, 3065, 3216
Eco130I CCWWGG 6 cut(s) 1846, 2742, 2987, 3620, 3628, 3676
Eco24I GRGCYC 1 cut(s) 2729
Eco47I GGWCC 4 cut(s) 628, 1406, 2454, 3625
Eco88I CYCGRG 1 cut(s) 1072
EcoNI CCTNNNNNAGG 1 cut(s) 3254
EcoO109I RGGNCCY 1 cut(s) 3625
EcoRI GAATTC 5 cut(s) 245, 920, 2839, 2917, 3359
EcoRII CCWGG 1 cut(s) 2509
EcoT14I CCWWGG 6 cut(s) 1846, 2742, 2987, 3620, 3628, 3676
EcoT22I ATGCAT 3 cut(s) 354, 1368, 3660
EcoT38I GRGCYC 1 cut(s) 2729
EgeI GGCGCC 1 cut(s) 2274
EheI GGCGCC 1 cut(s) 2274
ErhI CCWWGG 6 cut(s) 1846, 2742, 2987, 3620, 3628, 3676
FalI AAGNNNNNCTT 2 cut(s) 1376, 1408
FaqI GGGAC 2 cut(s) 3170, 3638
FauNDI CATATG 5 cut(s) 441, 887, 1174, 2643, 2776
Fnu4HI GCNGC 8 cut(s) 1514, 1699, 1810, 1813, 2748, 2771, 2804, 3058
FokI GGATG 5 cut(s) 204, 1749, 2206, 3061, 4116
FriOI GRGCYC 1 cut(s) 2729
Fsp4HI GCNGC 8 cut(s) 1514, 1699, 1810, 1813, 2748, 2771, 2804, 3058
GlaI GCGC 1 cut(s) 2274
GluI GCNGC 8 cut(s) 1514, 1699, 1810, 1813, 2748, 2771, 2804, 3058
GsaI CCCAGC 1 cut(s) 3348
HaeII RGCGCY 1 cut(s) 2276
HaeIII GGCC 3 cut(s) 2238, 2815, 3088
HapII CCGG 3 cut(s) 2235, 2282, 3567
HhaI GCGC 1 cut(s) 2275
Hin1I GRCGYC 2 cut(s) 2273, 3025
Hin6I GCGC 1 cut(s) 2273
HinP1I GCGC 1 cut(s) 2273
HincII GTYRAC 1 cut(s) 4147
HindII GTYRAC 1 cut(s) 4147
HpaII CCGG 3 cut(s) 2235, 2282, 3567
HphI GGTGA 7 cut(s) 14, 1491, 1735, 1783, 2976, 3576, 3879
Hpy166II GTNNAC 7 cut(s) 241, 1907, 2457, 2482, 2947, 3130, 4147
Hpy188I TCNGA 7 cut(s) 1009, 1585, 2571, 2955, 3511, 3688, 3976
Hpy8I GTNNAC 7 cut(s) 241, 1907, 2457, 2482, 2947, 3130, 4147
HpyCH4III ACNGT 6 cut(s) 52, 964, 1643, 2071, 2964, 3917
HpyCH4IV ACGT 3 cut(s) 1852, 3025, 4099
HpyF10VI GCNNNNNNNGC 7 cut(s) 1393, 2414, 2670, 2747, 2812, 3655, 3862
HpyF3I CTNAG 8 cut(s) 344, 752, 809, 927, 1008, 1509, 2430, 4135
HpySE526I ACGT 3 cut(s) 1852, 3025, 4099
Hsp92I GRCGYC 2 cut(s) 2273, 3025
HspAI GCGC 1 cut(s) 2273
KasI GGCGCC 1 cut(s) 2272
KpnI GGTACC 1 cut(s) 126
LguI GCTCTTC 1 cut(s) 888
LmnI GCTCC 4 cut(s) 1112, 1205, 3511, 3634
Lsp1109I GCAGC 5 cut(s) 1710, 1824, 2782, 2815, 3044
LweI GCATC 2 cut(s) 1525, 2228
MaeII ACGT 3 cut(s) 1852, 3025, 4099
MfeI CAATTG 1 cut(s) 2391
MhlI GDGCHC 3 cut(s) 2729, 2866, 3516
Mly113I GGCGCC 1 cut(s) 2273
MlyI GAGTC 9 cut(s) 1351, 1794, 2147, 2168, 2177, 2210, 2950, 3235, 4049
Mph1103I ATGCAT 3 cut(s) 354, 1368, 3660
MroXI GAANNNNTTC 1 cut(s) 3249
MslI CAYNNNNRTG 4 cut(s) 138, 841, 903, 1401
MspA1I CMGCKG 1 cut(s) 3057
MspI CCGG 3 cut(s) 2235, 2282, 3567
MspR9I CCNGG 2 cut(s) 2235, 2511
MunI CAATTG 1 cut(s) 2391
Mva1269I GAATGC 6 cut(s) 354, 819, 898, 1967, 2114, 3658
MvaI CCWGG 1 cut(s) 2511
MvnI CGCG 2 cut(s) 2914, 3601
MwoI GCNNNNNNNGC 7 cut(s) 1393, 2414, 2670, 2747, 2812, 3655, 3862
NarI GGCGCC 1 cut(s) 2273
NciI CCSGG 1 cut(s) 2235
NcoI CCATGG 1 cut(s) 3620
NdeI CATATG 5 cut(s) 441, 887, 1174, 2643, 2776
NlaIV GGNNCC 4 cut(s) 124, 2274, 2455, 3626
NmeAIII GCCGAG 1 cut(s) 2791
NmuCI GTSAC 4 cut(s) 792, 1476, 2065, 2436
NsiI ATGCAT 3 cut(s) 354, 1368, 3660
NspI RCATGY 9 cut(s) 255, 846, 936, 1019, 1986, 2562, 3522, 3789, 4167
NspV TTCGAA 1 cut(s) 3480
PaeI GCATGC 1 cut(s) 1986
PaeR7I CTCGAG 1 cut(s) 1072
PagI TCATGA 3 cut(s) 828, 2059, 3204
PciI ACATGT 6 cut(s) 251, 842, 1015, 2558, 3518, 4163
PciSI GCTCTTC 1 cut(s) 888
PctI GAATGC 6 cut(s) 354, 819, 898, 1967, 2114, 3658
PdmI GAANNNNTTC 1 cut(s) 3249
PfeI GAWTC 8 cut(s) 415, 1251, 1269, 1287, 2419, 2605, 3325, 3681
PflMI CCANNNNNTGG 2 cut(s) 3045, 3621
PkrI GCNGC 8 cut(s) 1515, 1700, 1811, 1814, 2749, 2772, 2805, 3059
Ple19I CGATCG 1 cut(s) 3605
PleI GAGTC 9 cut(s) 1351, 1794, 2146, 2167, 2176, 2209, 2950, 3234, 4048
PluTI GGCGCC 1 cut(s) 2276
PpsI GAGTC 9 cut(s) 1351, 1794, 2146, 2167, 2176, 2209, 2950, 3234, 4048
PpuMI RGGWCCY 1 cut(s) 3625
PscI ACATGT 6 cut(s) 251, 842, 1015, 2558, 3518, 4163
PshBI ATTAAT 2 cut(s) 2708, 4224
PsiI TTATAA 2 cut(s) 882, 1932
Psp5II RGGWCCY 1 cut(s) 3625
Psp6I CCWGG 1 cut(s) 2509
PspFI CCCAGC 1 cut(s) 3344
PspGI CCWGG 1 cut(s) 2509
PspN4I GGNNCC 4 cut(s) 124, 2274, 2455, 3626
PspPI GGNCC 4 cut(s) 628, 1406, 2454, 3625
PspPPI RGGWCCY 1 cut(s) 3625
PspXI VCTCGAGB 1 cut(s) 1072
PstNI CAGNNNCTG 1 cut(s) 3060
PvuI CGATCG 1 cut(s) 3605
PvuII CAGCTG 1 cut(s) 3057
RsaI GTAC 8 cut(s) 78, 124, 1014, 1458, 1859, 2370, 2563, 3310
RsaNI GTAC 8 cut(s) 77, 123, 1013, 1457, 1858, 2369, 2562, 3309
RseI CAYNNNNRTG 4 cut(s) 138, 841, 903, 1401
SapI GCTCTTC 1 cut(s) 888
SatI GCNGC 8 cut(s) 1514, 1699, 1810, 1813, 2748, 2771, 2804, 3058
Sau96I GGNCC 4 cut(s) 628, 1406, 2454, 3625
SchI GAGTC 9 cut(s) 1351, 1794, 2147, 2168, 2177, 2210, 2950, 3235, 4049
ScrFI CCNGG 2 cut(s) 2235, 2511
SduI GDGCHC 3 cut(s) 2729, 2866, 3516
SfaNI GCATC 2 cut(s) 1525, 2228
SfoI GGCGCC 1 cut(s) 2274
Sfr274I CTCGAG 1 cut(s) 1072
SfuI TTCGAA 1 cut(s) 3480
SinI GGWCC 4 cut(s) 628, 1406, 2454, 3625
SlaI CTCGAG 1 cut(s) 1072
SmiMI CAYNNNNRTG 4 cut(s) 138, 841, 903, 1401
SmlI CTYRAG 4 cut(s) 1072, 3380, 3576, 4196
SmoI CTYRAG 4 cut(s) 1072, 3380, 3576, 4196
SphI GCATGC 1 cut(s) 1986
SsiI CCGC 5 cut(s) 1514, 1810, 2598, 2747, 2914
SspDI GGCGCC 1 cut(s) 2272
SspI AATATT 3 cut(s) 2695, 2765, 3562
StyD4I CCNGG 2 cut(s) 2233, 2509
StyI CCWWGG 6 cut(s) 1846, 2742, 2987, 3620, 3628, 3676
TaaI ACNGT 6 cut(s) 52, 964, 1643, 2071, 2964, 3917
TaiI ACGT 3 cut(s) 1855, 3028, 4102
TaqI TCGA 8 cut(s) 316, 1073, 1310, 2359, 2579, 3065, 3480, 3605
TatI WGTACW 4 cut(s) 76, 1857, 2561, 3308
TauI GCSGC 3 cut(s) 1516, 1812, 2750
TfiI GAWTC 8 cut(s) 415, 1251, 1269, 1287, 2419, 2605, 3325, 3681
TscAI CASTG 3 cut(s) 55, 801, 3920
TseFI GTSAC 4 cut(s) 792, 1476, 2065, 2436
TseI GCWGC 5 cut(s) 1698, 1812, 2770, 2803, 3057
Tsp45I GTSAC 4 cut(s) 792, 1476, 2065, 2436
TspRI CASTG 3 cut(s) 55, 801, 3920
Van91I CCANNNNNTGG 2 cut(s) 3045, 3621
VpaK11BI GGWCC 4 cut(s) 628, 1406, 2454, 3625
VspI ATTAAT 2 cut(s) 2708, 4224
XagI CCTNNNNNAGG 1 cut(s) 3254
XbaI TCTAGA 2 cut(s) 1028, 3355
XceI RCATGY 9 cut(s) 255, 846, 936, 1019, 1986, 2562, 3522, 3789, 4167
XcmI CCANNNNNNNNNTGG 1 cut(s) 2489
XhoI CTCGAG 1 cut(s) 1072
XmaJI CCTAGG 2 cut(s) 3628, 3676
XmnI GAANNNNTTC 1 cut(s) 3249
ZraI GACGTC 1 cut(s) 3026
Zsp2I ATGCAT 3 cut(s) 354, 1368, 3660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.