AT4G21366

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000201
Physical Location & Seq
Forward (+)
11383541 .. 11383955
415 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G21366.1

Sequence Viewer

Length: 339 bp
ATGTCTCCCGAATACGCAATGGAGGGGATATTCTCGGTAAAATCGGATGTTTTCAGCTTCGGGGTTTTGGTTCTTGAGATTGTCAGTGGAAAGAGGAACAGAGGATTCCACAACTCCGGCCAAGACAATAATCTTCTCGGCTACACGTGGGAGAATTGGAAAGAAGGAAAAGGGCTAGAGATCGTCGATTCGATAATTGTAGATTCCTCATCATCAATGTCATTGTTCCAACCACATGAAGTCTTAAGATGCATACAGATTGGTCTTTTATGTGTTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTGATTGTCCCGTTTTGTACTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 DUF3660 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

112

Amino Acids

12.59

Weight (kDa)

5.31

Isoelectric Point (pI)

53.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 106 2.2e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 118
AcvI CACGTG 1 cut(s) 147
AfaI GTAC 1 cut(s) 331
AflII CTTAAG 1 cut(s) 244
AflIII ACRYGT 1 cut(s) 144
AgsI TTSAA 1 cut(s) 278
AluBI AGCT 1 cut(s) 57
AluI AGCT 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 9
AoxI GGCC 1 cut(s) 118
ArsI GACNNNNNNTTYG 2 cut(s) 293, 325
AsuHPI GGTGA 1 cut(s) 325
BbrPI CACGTG 1 cut(s) 147
BcoDI GTCTC 1 cut(s) 9
BfaI CTAG 1 cut(s) 176
BfrI CTTAAG 1 cut(s) 244
BmsI GCATC 1 cut(s) 239
BpuEI CTTGAG 1 cut(s) 95
BsaAI YACGTR 1 cut(s) 147
Bse3DI GCAATG 1 cut(s) 24
BseGI GGATG 1 cut(s) 52
BseMI GCAATG 1 cut(s) 24
BsgI GTGCAG 1 cut(s) 306
BshFI GGCC 1 cut(s) 120
BsiSI CCGG 1 cut(s) 117
BslFI GGGAC 1 cut(s) 305
BsmAI GTCTC 1 cut(s) 9
BsmFI GGGAC 1 cut(s) 305
BsnI GGCC 1 cut(s) 120
Bsp143I GATC 1 cut(s) 180
BspANI GGCC 1 cut(s) 120
BspTI CTTAAG 1 cut(s) 244
BsrDI GCAATG 1 cut(s) 24
BssMI GATC 1 cut(s) 180
BstAFI CTTAAG 1 cut(s) 244
BstBAI YACGTR 1 cut(s) 147
BstF5I GGATG 1 cut(s) 52
BstKTI GATC 1 cut(s) 183
BstMAI GTCTC 1 cut(s) 9
BstMBI GATC 1 cut(s) 180
BsuRI GGCC 1 cut(s) 120
BtsCI GGATG 1 cut(s) 52
BtsIMutI CAGTG 1 cut(s) 91
Csp6I GTAC 1 cut(s) 330
CviAII CATG 1 cut(s) 236
CviJI RGCY 4 cut(s) 57, 120, 141, 175
CviKI_1 RGCY 4 cut(s) 57, 120, 141, 175
CviQI GTAC 1 cut(s) 330
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
EaeI YGGCCR 1 cut(s) 118
Eco72I CACGTG 1 cut(s) 147
EcoT22I ATGCAT 1 cut(s) 254
FaeI CATG 1 cut(s) 239
FaiI YATR 3 cut(s) 237, 254, 271
FaqI GGGAC 1 cut(s) 305
FatI CATG 1 cut(s) 235
FokI GGATG 1 cut(s) 59
FspBI CTAG 1 cut(s) 176
HaeIII GGCC 1 cut(s) 120
HapII CCGG 1 cut(s) 117
Hin1II CATG 1 cut(s) 239
HinfI GANTC 3 cut(s) 105, 188, 203
HpaII CCGG 1 cut(s) 117
HphI GGTGA 1 cut(s) 325
Hpy188I TCNGA 1 cut(s) 46
Hpy188III TCNNGA 3 cut(s) 8, 74, 278
Hpy99I CGWCG 2 cut(s) 188, 313
HpyAV CCTTC 1 cut(s) 158
HpyCH4IV ACGT 2 cut(s) 146, 283
HpyCH4V TGCA 2 cut(s) 252, 287
HpySE526I ACGT 2 cut(s) 146, 283
Hsp92II CATG 1 cut(s) 239
Kzo9I GATC 1 cut(s) 180
LpnPI CCDG 1 cut(s) 130
LweI GCATC 1 cut(s) 239
MaeI CTAG 1 cut(s) 176
MaeII ACGT 2 cut(s) 146, 283
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 1 cut(s) 125
MluCI AATT 2 cut(s) 154, 195
MmeI TCCRAC 1 cut(s) 253
MnlI CCTC 5 cut(s) 16, 87, 95, 217, 283
Mph1103I ATGCAT 1 cut(s) 254
MseI TTAA 1 cut(s) 245
MspCI CTTAAG 1 cut(s) 244
MspI CCGG 1 cut(s) 117
NdeII GATC 1 cut(s) 180
NlaIII CATG 1 cut(s) 239
NmeAIII GCCGAG 1 cut(s) 117
NsiI ATGCAT 1 cut(s) 254
PfeI GAWTC 3 cut(s) 105, 188, 203
PmaCI CACGTG 1 cut(s) 147
PmlI CACGTG 1 cut(s) 147
Ppu21I YACGTR 1 cut(s) 147
PspCI CACGTG 1 cut(s) 147
RsaI GTAC 1 cut(s) 331
RsaNI GTAC 1 cut(s) 330
SaqAI TTAA 1 cut(s) 245
Sau3AI GATC 1 cut(s) 180
SetI ASST 3 cut(s) 59, 149, 286
SfaNI GCATC 1 cut(s) 239
SmlI CTYRAG 2 cut(s) 74, 244
SmoI CTYRAG 2 cut(s) 74, 244
Sse9I AATT 2 cut(s) 154, 195
SspMI CTAG 1 cut(s) 176
TaiI ACGT 2 cut(s) 149, 286
TaqI TCGA 3 cut(s) 186, 191, 334
TasI AATT 2 cut(s) 154, 195
TatI WGTACW 1 cut(s) 329
TfiI GAWTC 3 cut(s) 105, 188, 203
Tru1I TTAA 1 cut(s) 245
Tru9I TTAA 1 cut(s) 245
TscAI CASTG 1 cut(s) 91
TspDTI ATGAA 1 cut(s) 252
TspRI CASTG 1 cut(s) 91
Vha464I CTTAAG 1 cut(s) 244
XspI CTAG 1 cut(s) 176
Zsp2I ATGCAT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.