Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000201

Physical Location & Seq

Genomic Coordinates Reverse (-)

11973842 .. 11978191

Gene Structure 4350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G196400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGACCATTCCTTGTTTCATGTTCATTGGAATTTATGTGTCTGTCTCTTTCTTCACAACCTCATATGCAGCTGATGCCATAACTCAATCCCAAACCCTTAGAGATGGCAAAACCTTGGTTTCCAAACATGGCAGCTTTCAGTTGGGTTTTTTCAGTCCAACTGCAAGTGACACCAAGAACCGCTTCTTGGGGATTTGGTGCAAGAATTCATCAGTCTCATCAGCCACAACTGTTACTTGGGTTGCAAATCAGCACAACCCCATCAATGGTTCATCAGGCCTTCTGATGATCAACAGCTCCGGAAATGTTGTCCTTCTAAGTCAAAATAGCACTGTTGTTTGGTCAATAGCTTTGTCCAAGCAAACCCCGAATCCCATTTTGCAGCTCTTGGATTCTGGCAATCTTGTCCTAAGAGAAGCCCGAGATGGGAATTCAAGGAACTACTTGTGGCAAAGCTTGCGGTGGGACGAGAAGGCCGGTCTTTACCGGAGTCTATTGGCTTCGAGTTCAAGTGACATCTGTGACAATTATGGCCGTTGTGGCCCCTATGGAATGTGTGACATTAGCAACTCAGAAGTTTGCAGCTGTTTAAAAGGGTTTCAACCCAAAGATCCTGGAAATTGGAAGTATGCAGACAACTCAGGAGGTTGTGAGCGTATTACACCATTCGTGTGCCAAAATGGAGACGGGTTTGAGAAATATGGTGGGGTGAAGCTGCCAGATACAACACATTCTTGGGTCAACCAAAGTATGAGCCTCAAAGAATGCAGGGCAAGTTGCTTGAACAGCTGTTCTTGTACGGCTTATGCAATCTCTAATGTCAAAGGGGGCAGTAGCTGCACTATCTGGTTTGGTGATCTTATCAGCCTTAGGAAGCTTCTTGATGAAGGGCAGGATCTATATGTTCGAATGCCTGCTTCGGAATCAGACACAGACCGTCCGCGTAAGACGAAGATAATAGTGATAGCTGTAGCCGCAGTGTCCATTGTTTCCGGGACGTTCTTAGCTGTCTATTGTATTCACAGAAGGAGGAGAAAGCTCAAAGAGAAACTGCGGAAAGATGGAATGATGGGTCAGAACAATGAAGGACAGAAGGAAGACCTGGAGCTACCATCCTTTAGCTTGCCAACATTAATCACAGCCACTGATAACTTTTCGTTCAACATGAAGCTTGGAGAAGGTGGTTTTGGATCCGTGTACAAGGGTAGACTAGTAGATGGGCAAGAGATTGCAGTGAAGAGGCTCTCCCAAAGTTCTAGGCAAGGAATCGCCGAATTCAAAAATGAAGTTATACTAATAGCCAAGCTTCAGCACCGAAATCTTGTAAAGCTTCTTGGCTACTGCATTCAGGGAGAAGAAAGATTGCTCATTTATGAATATATGCCCAACAAAAGCTTGGACTTCTACATTTTTGATCAAAATCAAGGTAGACTGTTAGATTGGTCTCAACGCTTCCCCATTATCTGTGGGATTGCAAGGGGTCTTCTCTATCTGCATCAAGATTCCAGACTGAGGATTATTCATAGAGATCTTAAAGCAAGCAATGTGTTACTTGATAAAGAGATGAACCCAAAAATCTCAGACTTTGGCATGGCTAGAATATTTGGAGGAGATCAGACTGAAGGAGTTACAAAGAAAGTTGTTGGAACCTATGGTTATATGGCACCAGAATACGCCATTGATGGTCAATTCTCCGTAAAATCCGATGTTTTTAGCTTTGGTGTTTTATTGTTGGAGACACTAAGTGGAAAGAGAAGTAGAGGGTTTTATGATCGAAATCACAACCTCAACCTCATTGGACATGCATGGCGATTATGGAAAGAGGGAAGGTCCTTAGAGATGATTGATAAATGCTTAAGTGATTCGTGCACTCTCTCAGAAGTCTTGCGTTGCATACATGTTAGTCTTTTATGTGTGCAACAGCTTCCTGAAGACAGGCCAACCATGTCAACTGTGGTTCTGATGTTAGGTGGTGAGAGCGCCTTGCCTCAACCCAAAAAACCAGCTTTCTTTTTAGGAAAACATCCATCCTCCGAAGCAGGTTCTTCTTCAAGTAAGAACCAAACGTCCTCAACTTTCGGTGTGAGAAACGAAACATCTTCAACTAATGAATCTTCGATAACAGTGTTGGAGCCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

714

Amino Acids

79.1

Weight (kDa)

8.81

Isoelectric Point (pI)

45.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21366
fragaria_vesca	FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica	MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica	Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis	pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis	RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata	RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora	Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii	Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa	Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha	Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana	Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2030
AccB1I	GGYRCC	1 cut(s)	1663
AccI	GTMKAC	2 cut(s)	1207, 1429
AccII	CGCG	1 cut(s)	943
AccIII	TCCGGA	1 cut(s)	299
AciI	CCGC	5 cut(s)	181, 460, 941, 975, 1054
AclWI	GGATC	4 cut(s)	605, 903, 1185, 1198
AcoI	YGGCCR	1 cut(s)	532
AcsI	RAATTY	4 cut(s)	30, 205, 430, 1274
AcuI	CTGAAG	3 cut(s)	1292, 1641, 1950
AdeI	CACNNNGTG	1 cut(s)	1745
AfaI	GTAC	2 cut(s)	799, 1199
AfiI	CCNNNNNNNGG	4 cut(s)	187, 266, 426, 1512
AflII	CTTAAG	1 cut(s)	1855
AflIII	ACRYGT	1 cut(s)	1897
AgsI	TTSAA	8 cut(s)	435, 510, 602, 784, 1162, 1279, 2052, 2103
AhlI	ACTAGT	1 cut(s)	1210
AjnI	CCWGG	2 cut(s)	613, 1101
AjuI	GAANNNNNNNTTGG	6 cut(s)	167, 170, 199, 202, 1170, 1202
AloI	GAACNNNNNNTCC	2 cut(s)	2051, 2083
Alw21I	GWGCWC	1 cut(s)	1871
Alw26I	GTCTC	5 cut(s)	49, 220, 678, 1449, 1730
Alw44I	GTGCAC	1 cut(s)	1867
AlwI	GGATC	4 cut(s)	605, 903, 1185, 1198
AlwNI	CAGNNNCTG	2 cut(s)	837, 1145
Ama87I	CYCGRG	1 cut(s)	420
Aor13HI	TCCGGA	1 cut(s)	299
AoxI	GGCC	5 cut(s)	277, 474, 532, 541, 1937
ApaLI	GTGCAC	1 cut(s)	1867
ApeKI	GCWGC	6 cut(s)	68, 132, 382, 582, 715, 837
ApoI	RAATTY	4 cut(s)	30, 205, 430, 1274
AseI	ATTAAT	1 cut(s)	1133
Asp700I	GAANNNNTTC	1 cut(s)	182
AspLEI	GCGC	1 cut(s)	1982
AspS9I	GGNCC	2 cut(s)	542, 1830
AsuC2I	CCSGG	1 cut(s)	994
AsuHPI	GGTGA	3 cut(s)	721, 866, 1985
AsuII	TTCGAA	1 cut(s)	907
AvaI	CYCGRG	1 cut(s)	420
AvaII	GGWCC	1 cut(s)	1830
AxyI	CCTNAGG	1 cut(s)	869
BaeGI	GKGCMC	1 cut(s)	1871
BamHI	GGATCC	1 cut(s)	1190
BanI	GGYRCC	1 cut(s)	1663
BbsI	GAAGAC	3 cut(s)	1104, 1475, 1938
Bbv12I	GWGCWC	1 cut(s)	1871
BbvI	GCAGC	6 cut(s)	80, 144, 394, 594, 702, 824
BccI	CCATC	9 cut(s)	98, 269, 419, 1055, 1063, 1120, 1211, 1676, 2035
BceAI	ACGGC	2 cut(s)	519, 816
BciT130I	CCWGG	2 cut(s)	615, 1103
BclI	TGATCA	2 cut(s)	288, 1414
BcnI	CCSGG	1 cut(s)	994
BcoDI	GTCTC	5 cut(s)	49, 220, 678, 1449, 1730
BcuI	ACTAGT	1 cut(s)	1210
BfaI	CTAG	3 cut(s)	1211, 1257, 1596
BfmI	CTRYAG	1 cut(s)	969
BfoI	RGCGCY	1 cut(s)	1983
BfrI	CTTAAG	1 cut(s)	1855
BfuAI	ACCTGC	1 cut(s)	2030
BglI	GCCNNNNNGGC	1 cut(s)	540
BglII	AGATCT	1 cut(s)	1528
BisI	GCNGC	7 cut(s)	69, 133, 383, 583, 716, 838, 975
BlsI	GCNGC	7 cut(s)	70, 134, 384, 584, 717, 839, 976
Bme1390I	CCNGG	3 cut(s)	615, 994, 1103
Bme18I	GGWCC	1 cut(s)	1830
BmeT110I	CYCGRG	1 cut(s)	420
BmgT120I	GGNCC	2 cut(s)	542, 1830
BmiI	GGNNCC	5 cut(s)	544, 1192, 1648, 1665, 2133
BmrFI	CCNGG	3 cut(s)	615, 994, 1103
BmsI	GCATC	2 cut(s)	64, 1504
BpiI	GAAGAC	3 cut(s)	1104, 1475, 1938
BpmI	CTGGAG	1 cut(s)	1124
Bpu14I	TTCGAA	1 cut(s)	907
BpuMI	CCSGG	1 cut(s)	994
BsaBI	GATNNNNATC	2 cut(s)	1419, 1776
BsaI	GGTCTC	1 cut(s)	1449
BsaJI	CCNNGG	1 cut(s)	114
BsaWI	WCCGGW	2 cut(s)	299, 486
Bsc4I	CCNNNNNNNGG	4 cut(s)	187, 266, 426, 1512
Bse118I	RCCGGY	1 cut(s)	476
Bse21I	CCTNAGG	1 cut(s)	869
Bse3DI	GCAATG	1 cut(s)	1549
Bse8I	GATNNNNATC	2 cut(s)	1419, 1776
BseAI	TCCGGA	1 cut(s)	299
BseBI	CCWGG	2 cut(s)	615, 1103
BseDI	CCNNGG	1 cut(s)	114
BseGI	GGATG	3 cut(s)	1112, 2023, 2027
BseJI	GATNNNNATC	2 cut(s)	1419, 1776
BseLI	CCNNNNNNNGG	4 cut(s)	187, 266, 426, 1512
BseMI	GCAATG	1 cut(s)	1549
BseMII	CTCAG	5 cut(s)	585, 654, 1502, 1593, 1890
BseRI	GAGGAG	2 cut(s)	1045, 1623
BseSI	GKGCMC	1 cut(s)	1871
BseXI	GCAGC	6 cut(s)	80, 144, 394, 594, 702, 824
BsgI	GTGCAG	1 cut(s)	823
Bsh1236I	CGCG	1 cut(s)	943
BshFI	GGCC	5 cut(s)	279, 476, 534, 543, 1939
BshNI	GGYRCC	1 cut(s)	1663
BsiHKAI	GWGCWC	1 cut(s)	1871
BsiHKCI	CYCGRG	1 cut(s)	420
BsiSI	CCGG	4 cut(s)	300, 477, 487, 993
BslFI	GGGAC	2 cut(s)	479, 1009
BslI	CCNNNNNNNGG	4 cut(s)	187, 266, 426, 1512
BsmAI	GTCTC	5 cut(s)	49, 220, 678, 1449, 1730
BsmBI	CGTCTC	1 cut(s)	678
BsmFI	GGGAC	2 cut(s)	479, 1009
BsmI	GAATGC	3 cut(s)	770, 915, 1344
BsnI	GGCC	5 cut(s)	279, 476, 534, 543, 1939
Bso31I	GGTCTC	1 cut(s)	1449
BsoBI	CYCGRG	1 cut(s)	420
Bsp119I	TTCGAA	1 cut(s)	907
Bsp1286I	GDGCHC	1 cut(s)	1871
Bsp13I	TCCGGA	1 cut(s)	299
Bsp1407I	TGTACA	1 cut(s)	1197
Bsp143I	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
BspACI	CCGC	5 cut(s)	181, 460, 941, 975, 1054
BspANI	GGCC	5 cut(s)	279, 476, 534, 543, 1939
BspCNI	CTCAG	5 cut(s)	584, 653, 1503, 1592, 1889
BspEI	TCCGGA	1 cut(s)	299
BspFNI	CGCG	1 cut(s)	943
BspLI	GGNNCC	5 cut(s)	544, 1192, 1648, 1665, 2133
BspMI	ACCTGC	1 cut(s)	2030
BspPI	GGATC	4 cut(s)	605, 903, 1185, 1198
BspT104I	TTCGAA	1 cut(s)	907
BspT107I	GGYRCC	1 cut(s)	1663
BspTI	CTTAAG	1 cut(s)	1855
BspTNI	GGTCTC	1 cut(s)	1449
BsrDI	GCAATG	1 cut(s)	1549
BsrFI	RCCGGY	1 cut(s)	476
BsrGI	TGTACA	1 cut(s)	1197
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	1 cut(s)	114
BssMI	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
BssT1I	CCWWGG	1 cut(s)	114
Bst2UI	CCWGG	2 cut(s)	615, 1103
Bst4CI	ACNGT	6 cut(s)	232, 334, 938, 1434, 1954, 2125
Bst6I	CTCTTC	1 cut(s)	1232
BstAFI	CTTAAG	1 cut(s)	1855
BstAPI	GCANNNNNTGC	3 cut(s)	74, 457, 837
BstAUI	TGTACA	1 cut(s)	1197
BstBI	TTCGAA	1 cut(s)	907
BstC8I	GCNNGC	4 cut(s)	458, 915, 1124, 1540
BstF5I	GGATG	3 cut(s)	1112, 2023, 2027
BstFNI	CGCG	1 cut(s)	943
BstH2I	RGCGCY	1 cut(s)	1983
BstHHI	GCGC	1 cut(s)	1982
BstKTI	GATC	9 cut(s)	291, 613, 859, 898, 1193, 1417, 1531, 1615, 1774
BstMAI	GTCTC	5 cut(s)	49, 220, 678, 1449, 1730
BstMBI	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
BstMWI	GCNNNNNNNGC	6 cut(s)	74, 457, 540, 786, 837, 974
BstNI	CCWGG	2 cut(s)	615, 1103
BstNSI	RCATGY	2 cut(s)	1805, 1901
BstSCI	CCNGG	3 cut(s)	613, 992, 1101
BstSFI	CTRYAG	1 cut(s)	969
BstSLI	GKGCMC	1 cut(s)	1871
BstUI	CGCG	1 cut(s)	943
BstV1I	GCAGC	6 cut(s)	80, 144, 394, 594, 702, 824
BstV2I	GAAGAC	3 cut(s)	1104, 1475, 1938
BstX2I	RGATCY	4 cut(s)	610, 895, 1190, 1528
BstYI	RGATCY	4 cut(s)	610, 895, 1190, 1528
Bsu36I	CCTNAGG	1 cut(s)	869
BsuRI	GGCC	5 cut(s)	279, 476, 534, 543, 1939
BtsCI	GGATG	3 cut(s)	1112, 2023, 2027
BtsI	GCAGTG	2 cut(s)	984, 1239
BtsIMutI	CAGTG	5 cut(s)	330, 984, 1143, 1239, 2130
BveI	ACCTGC	1 cut(s)	2030
Cac8I	GCNNGC	4 cut(s)	458, 915, 1124, 1540
CaiI	CAGNNNCTG	2 cut(s)	837, 1145
CfoI	GCGC	1 cut(s)	1982
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	2 cut(s)	542, 1830
Csp6I	GTAC	2 cut(s)	798, 1198
CviAII	CATG	8 cut(s)	19, 128, 1165, 1591, 1802, 1806, 1898, 1945
CviQI	GTAC	2 cut(s)	798, 1198
DpnI	GATC	9 cut(s)	290, 612, 858, 897, 1192, 1416, 1530, 1614, 1773
DpnII	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
DraI	TTTAAA	1 cut(s)	591
DraIII	CACNNNGTG	1 cut(s)	1745
EaeI	YGGCCR	1 cut(s)	532
Eam1104I	CTCTTC	1 cut(s)	1232
EarI	CTCTTC	1 cut(s)	1232
Eco130I	CCWWGG	1 cut(s)	114
Eco147I	AGGCCT	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	1449
Eco47I	GGWCC	1 cut(s)	1830
Eco57I	CTGAAG	3 cut(s)	1292, 1641, 1950
Eco81I	CCTNAGG	1 cut(s)	869
Eco88I	CYCGRG	1 cut(s)	420
EcoO109I	RGGNCCY	1 cut(s)	1830
EcoRI	GAATTC	3 cut(s)	205, 430, 1274
EcoRII	CCWGG	2 cut(s)	613, 1101
EcoT14I	CCWWGG	1 cut(s)	114
EcoT22I	ATGCAT	1 cut(s)	1807
ErhI	CCWWGG	1 cut(s)	114
Esp3I	CGTCTC	1 cut(s)	678
FaeI	CATG	8 cut(s)	22, 131, 1168, 1594, 1805, 1809, 1901, 1948
FalI	AAGNNNNNCTT	2 cut(s)	167, 199
FaqI	GGGAC	2 cut(s)	479, 1009
FatI	CATG	8 cut(s)	18, 127, 1164, 1590, 1801, 1805, 1897, 1944
FauNDI	CATATG	1 cut(s)	64
FbaI	TGATCA	2 cut(s)	288, 1414
FblI	GTMKAC	2 cut(s)	1207, 1429
Fnu4HI	GCNGC	7 cut(s)	69, 133, 383, 583, 716, 838, 975
FokI	GGATG	3 cut(s)	1099, 2010, 2014
Fsp4HI	GCNGC	7 cut(s)	69, 133, 383, 583, 716, 838, 975
FspBI	CTAG	3 cut(s)	1211, 1257, 1596
GlaI	GCGC	1 cut(s)	1981
GluI	GCNGC	7 cut(s)	69, 133, 383, 583, 716, 838, 975
GsuI	CTGGAG	1 cut(s)	1124
HaeII	RGCGCY	1 cut(s)	1983
HaeIII	GGCC	5 cut(s)	279, 476, 534, 543, 1939
HapII	CCGG	4 cut(s)	300, 477, 487, 993
HhaI	GCGC	1 cut(s)	1982
Hin1II	CATG	8 cut(s)	22, 131, 1168, 1594, 1805, 1809, 1901, 1948
Hin6I	GCGC	1 cut(s)	1980
HinP1I	GCGC	1 cut(s)	1980
HincII	GTYRAC	2 cut(s)	742, 1950
HindII	GTYRAC	2 cut(s)	742, 1950
HindIII	AAGCTT	6 cut(s)	454, 875, 1169, 1304, 1328, 1393
HinfI	GANTC	8 cut(s)	370, 392, 490, 923, 1266, 1502, 1862, 2111
HpaII	CCGG	4 cut(s)	300, 477, 487, 993
HphI	GGTGA	3 cut(s)	721, 866, 1985
Hpy166II	GTNNAC	6 cut(s)	742, 1198, 1208, 1430, 1869, 1950
Hpy188III	TCNNGA	6 cut(s)	300, 642, 881, 1499, 1506, 1928
Hpy8I	GTNNAC	6 cut(s)	742, 1198, 1208, 1430, 1869, 1950
HpyCH4III	ACNGT	6 cut(s)	232, 334, 938, 1434, 1954, 2125
HpyCH4IV	ACGT	2 cut(s)	998, 2066
HpyF10VI	GCNNNNNNNGC	6 cut(s)	74, 457, 540, 786, 837, 974
HpySE526I	ACGT	2 cut(s)	998, 2066
Hsp92II	CATG	8 cut(s)	22, 131, 1168, 1594, 1805, 1809, 1901, 1948
HspAI	GCGC	1 cut(s)	1980
Kpn2I	TCCGGA	1 cut(s)	299
Ksp22I	TGATCA	2 cut(s)	288, 1414
Kzo9I	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
LmnI	GCTCC	3 cut(s)	302, 1105, 2131
Lsp1109I	GCAGC	6 cut(s)	80, 144, 394, 594, 702, 824
LweI	GCATC	2 cut(s)	64, 1504
MaeI	CTAG	3 cut(s)	1211, 1257, 1596
MaeII	ACGT	2 cut(s)	998, 2066
MaeIII	GTNAC	7 cut(s)	167, 232, 512, 521, 557, 1548, 1627
MalI	GATC	9 cut(s)	290, 612, 858, 897, 1192, 1416, 1530, 1614, 1773
MboI	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
MflI	RGATCY	4 cut(s)	610, 895, 1190, 1528
MhlI	GDGCHC	1 cut(s)	1871
MluCI	AATT	7 cut(s)	30, 205, 430, 526, 619, 1274, 1688
MlyI	GAGTC	1 cut(s)	499
MmeI	TCCRAC	4 cut(s)	182, 1624, 1713, 2109
Mph1103I	ATGCAT	1 cut(s)	1807
MroI	TCCGGA	1 cut(s)	299
MroXI	GAANNNNTTC	1 cut(s)	182
MseI	TTAA	4 cut(s)	590, 1133, 1533, 1856
MslI	CAYNNNNRTG	1 cut(s)	670
MspA1I	CMGCKG	3 cut(s)	71, 585, 789
MspCI	CTTAAG	1 cut(s)	1855
MspI	CCGG	4 cut(s)	300, 477, 487, 993
MspR9I	CCNGG	3 cut(s)	615, 994, 1103
Mva1269I	GAATGC	3 cut(s)	770, 915, 1344
MvaI	CCWGG	2 cut(s)	615, 1103
MvnI	CGCG	1 cut(s)	943
MwoI	GCNNNNNNNGC	6 cut(s)	74, 457, 540, 786, 837, 974
NciI	CCSGG	1 cut(s)	994
NdeI	CATATG	1 cut(s)	64
NdeII	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
NlaIII	CATG	8 cut(s)	22, 131, 1168, 1594, 1805, 1809, 1901, 1948
NlaIV	GGNNCC	5 cut(s)	544, 1192, 1648, 1665, 2133
NmuCI	GTSAC	4 cut(s)	167, 512, 521, 557
NsiI	ATGCAT	1 cut(s)	1807
NspI	RCATGY	2 cut(s)	1805, 1901
NspV	TTCGAA	1 cut(s)	907
PceI	AGGCCT	1 cut(s)	279
PciI	ACATGT	1 cut(s)	1897
PctI	GAATGC	3 cut(s)	770, 915, 1344
PdmI	GAANNNNTTC	1 cut(s)	182
PfeI	GAWTC	7 cut(s)	370, 392, 923, 1266, 1502, 1862, 2111
PfoI	TCCNGGA	2 cut(s)	613, 992
PkrI	GCNGC	7 cut(s)	70, 134, 384, 584, 717, 839, 976
PleI	GAGTC	1 cut(s)	498
PpsI	GAGTC	1 cut(s)	498
PpuMI	RGGWCCY	1 cut(s)	1830
PscI	ACATGT	1 cut(s)	1897
PshBI	ATTAAT	1 cut(s)	1133
Psp5II	RGGWCCY	1 cut(s)	1830
Psp6I	CCWGG	2 cut(s)	613, 1101
PspGI	CCWGG	2 cut(s)	613, 1101
PspN4I	GGNNCC	5 cut(s)	544, 1192, 1648, 1665, 2133
PspPI	GGNCC	2 cut(s)	542, 1830
PspPPI	RGGWCCY	1 cut(s)	1830
PstNI	CAGNNNCTG	2 cut(s)	837, 1145
PsuI	RGATCY	4 cut(s)	610, 895, 1190, 1528
PvuII	CAGCTG	3 cut(s)	71, 585, 789
RsaI	GTAC	2 cut(s)	799, 1199
RsaNI	GTAC	2 cut(s)	798, 1198
RseI	CAYNNNNRTG	1 cut(s)	670
SaqAI	TTAA	4 cut(s)	590, 1133, 1533, 1856
SatI	GCNGC	7 cut(s)	69, 133, 383, 583, 716, 838, 975
Sau3AI	GATC	9 cut(s)	288, 610, 856, 895, 1190, 1414, 1528, 1612, 1771
Sau96I	GGNCC	2 cut(s)	542, 1830
SchI	GAGTC	1 cut(s)	499
ScrFI	CCNGG	3 cut(s)	615, 994, 1103
SduI	GDGCHC	1 cut(s)	1871
SfaNI	GCATC	2 cut(s)	64, 1504
SfcI	CTRYAG	1 cut(s)	969
SfiI	GGCCNNNNNGGCC	1 cut(s)	540
SfuI	TTCGAA	1 cut(s)	907
SinI	GGWCC	1 cut(s)	1830
SmiMI	CAYNNNNRTG	1 cut(s)	670
SmlI	CTYRAG	1 cut(s)	1855
SmoI	CTYRAG	1 cut(s)	1855
SpeI	ACTAGT	1 cut(s)	1210
Sse9I	AATT	7 cut(s)	30, 205, 430, 526, 619, 1274, 1688
SseBI	AGGCCT	1 cut(s)	279
SsiI	CCGC	5 cut(s)	181, 460, 941, 975, 1054
SspI	AATATT	1 cut(s)	1602
SspMI	CTAG	3 cut(s)	1211, 1257, 1596
StuI	AGGCCT	1 cut(s)	279
StyD4I	CCNGG	3 cut(s)	613, 992, 1101
StyI	CCWWGG	1 cut(s)	114
TaaI	ACNGT	6 cut(s)	232, 334, 938, 1434, 1954, 2125
TaiI	ACGT	2 cut(s)	1001, 2069
TaqI	TCGA	5 cut(s)	503, 907, 1774, 2117, 2137
TasI	AATT	7 cut(s)	30, 205, 430, 526, 619, 1274, 1688
TatI	WGTACW	1 cut(s)	1197
TauI	GCSGC	1 cut(s)	977
TfiI	GAWTC	7 cut(s)	370, 392, 923, 1266, 1502, 1862, 2111
Tru1I	TTAA	4 cut(s)	590, 1133, 1533, 1856
Tru9I	TTAA	4 cut(s)	590, 1133, 1533, 1856
TscAI	CASTG	5 cut(s)	337, 984, 1150, 1239, 2130
TseFI	GTSAC	4 cut(s)	167, 512, 521, 557
TseI	GCWGC	6 cut(s)	68, 132, 382, 582, 715, 837
Tsp45I	GTSAC	4 cut(s)	167, 512, 521, 557
TspGWI	ACGGA	2 cut(s)	1183, 1684
TspRI	CASTG	5 cut(s)	337, 984, 1150, 1239, 2130
Vha464I	CTTAAG	1 cut(s)	1855
VneI	GTGCAC	1 cut(s)	1867
VpaK11BI	GGWCC	1 cut(s)	1830
VspI	ATTAAT	1 cut(s)	1133
XapI	RAATTY	4 cut(s)	30, 205, 430, 1274
XceI	RCATGY	2 cut(s)	1805, 1901
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1393, 1951
XmiI	GTMKAC	2 cut(s)	1207, 1429
XmnI	GAANNNNTTC	1 cut(s)	182
XspI	CTAG	3 cut(s)	1211, 1257, 1596
Zsp2I	ATGCAT	1 cut(s)	1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.