RchiOBHm_Chr3g0483581

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
29865683 .. 29868365
2683 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44833

Sequence Viewer

Length: 1116 bp
ATGATAGGAAAGCGTAGACGAAATAAATATTCATTTAAACTTACCGCTGGGTCAACCTACTTCGAAGAATCTTCTGGTGGAACAGCTTTTGATGATAGTAGAATAAACTCAGAGTTAGCATTCTTTCATCTAAAAACAATAGCAAATGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGACAAGGAGGTTTTGGCTCCGTTTATAAGGGCATACTTTACGATGGAAAGGAAATAGCGGTAAAAAGACTATCCAAATTTTCTGACCAAGGAGTTGAAGAGTTTAAGAATGAAGTTTTTCTGATTGCAAAGCTCCAACACAGAAACCTTGTCAGGATTTTTGGTTGTTGTGTTGAAGATGAAGAGAAGATCCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAAGCGAGCACTTTTAAATTGGACAAAACGTTTCGAGATTATCTTTGGGATTGCTAGAGGGATATTATATCTTCACGAAGATTCGAGATTAAGAATTATCCATAGAGATCTAAAGGTCAGCAATGTTTTATTGGATAATTCTTTGAACCCAAAAATTGCGGATTTTGGTATGGCCAGAATATTTAGAGCGGATCAAAGTGAAGCGAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCTCCGGAATATGCAATGGAAGGACTGTTTTCAATAAAGTCTGATGTATATAGTTTTGGTGTTTTACTGCTGGAAATCATTATTGGCAAAAAGAATGCTGGTTATTACCATGAGGAGTATTCTAATTCAAATTTGGTTGGACATGTTTGGGAGTTGTGGAAAAAAGGTAGAGCTGTGGAAGTCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAGTTATAAGGTGCATTCAAATCTCACTCTTGTGTGTGCAAGAATTTGCCACTGACCGGCCAACCATGTCAGCAGTTGTTTCCATGTTAGGTAATGATGCAGCCCTTCCTTCACCAAGACGACCCGCATTTTTACTAAAGAGAACGAGTCCTAGTGGAGACCCATCCAGCAGCGAAGGAGCTAATTCAGTAAATGATGTCACATGTACAATTATAGAAGCTCGCTAA

Protein Analysis

371

Amino Acids

41.75

Weight (kDa)

7.62

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 55 - 325 1.7e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 55 - 322 7e-44 Protein kinase domain
DUF3403 PF11883 328 - 371 1.8e-08 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 207, 896
AccBSI CCGCTC 1 cut(s) 617
AccI GTMKAC 1 cut(s) 16
AccIII TCCGGA 1 cut(s) 673
AciI CCGC 5 cut(s) 45, 239, 587, 617, 1014
AclI AACGTT 1 cut(s) 457
AclWI GGATC 2 cut(s) 364, 627
AcoI YGGCCR 2 cut(s) 600, 947
AcsI RAATTY 3 cut(s) 257, 799, 932
AfaI GTAC 1 cut(s) 1096
AfiI CCNNNNNNNGG 1 cut(s) 945
AflIII ACRYGT 2 cut(s) 811, 1091
AgsI TTSAA 7 cut(s) 170, 278, 356, 574, 702, 798, 908
AjuI GAANNNNNNNTTGG 4 cut(s) 162, 194, 735, 767
AleI CACNNNNGTG 1 cut(s) 919
AluBI AGCT 6 cut(s) 86, 178, 313, 842, 1070, 1109
AluI AGCT 6 cut(s) 86, 178, 313, 842, 1070, 1109
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 2 cut(s) 675, 1041
AlwI GGATC 2 cut(s) 364, 627
Aor13HI TCCGGA 1 cut(s) 673
AoxI GGCC 2 cut(s) 600, 947
ApeKI GCWGC 2 cut(s) 989, 1059
ApoI RAATTY 3 cut(s) 257, 799, 932
Asp700I GAANNNNTTC 1 cut(s) 297
AsuHPI GGTGA 2 cut(s) 881, 993
AsuII TTCGAA 1 cut(s) 63
BalI TGGCCA 1 cut(s) 602
Bbv12I GWGCWC 1 cut(s) 439
BbvI GCAGC 2 cut(s) 1001, 1071
BccI CCATC 2 cut(s) 218, 1060
BcoDI GTCTC 2 cut(s) 675, 1041
BfaI CTAG 2 cut(s) 483, 1041
BfmI CTRYAG 1 cut(s) 864
BglII AGATCT 1 cut(s) 535
BisI GCNGC 2 cut(s) 990, 1060
BlsI GCNGC 2 cut(s) 991, 1061
BmiI GGNNCC 1 cut(s) 199
BmsI GCATC 1 cut(s) 976
Bpu14I TTCGAA 1 cut(s) 63
BsaBI GATNNNNATC 1 cut(s) 374
BsaI GGTCTC 1 cut(s) 1041
BsaJI CCNNGG 1 cut(s) 268
BsaWI WCCGGW 1 cut(s) 673
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bsc4I CCNNNNNNNGG 1 cut(s) 945
Bse118I RCCGGY 1 cut(s) 945
Bse3DI GCAATG 2 cut(s) 556, 690
Bse8I GATNNNNATC 1 cut(s) 374
BseAI TCCGGA 1 cut(s) 673
BseDI CCNNGG 1 cut(s) 268
BseGI GGATG 1 cut(s) 1052
BseJI GATNNNNATC 1 cut(s) 374
BseLI CCNNNNNNNGG 1 cut(s) 945
BseMI GCAATG 2 cut(s) 556, 690
BseMII CTCAG 1 cut(s) 123
BseRI GAGGAG 1 cut(s) 797
BseXI GCAGC 2 cut(s) 1001, 1071
BseYI CCCAGC 1 cut(s) 47
BshFI GGCC 2 cut(s) 602, 949
BsiHKAI GWGCWC 1 cut(s) 439
BsiSI CCGG 2 cut(s) 674, 946
BslI CCNNNNNNNGG 1 cut(s) 945
BsmAI GTCTC 2 cut(s) 675, 1041
BsmI GAATGC 3 cut(s) 119, 769, 903
BsnI GGCC 2 cut(s) 602, 949
Bso31I GGTCTC 1 cut(s) 1041
Bsp119I TTCGAA 1 cut(s) 63
Bsp1286I GDGCHC 1 cut(s) 439
Bsp13I TCCGGA 1 cut(s) 673
Bsp1407I TGTACA 1 cut(s) 1094
Bsp143I GATC 3 cut(s) 369, 535, 619
BspACI CCGC 5 cut(s) 45, 239, 587, 617, 1014
BspANI GGCC 2 cut(s) 602, 949
BspCNI CTCAG 1 cut(s) 122
BspEI TCCGGA 1 cut(s) 673
BspLI GGNNCC 1 cut(s) 199
BspPI GGATC 2 cut(s) 364, 627
BspT104I TTCGAA 1 cut(s) 63
BspTNI GGTCTC 1 cut(s) 1041
BsrBI CCGCTC 1 cut(s) 617
BsrDI GCAATG 2 cut(s) 556, 690
BsrFI RCCGGY 1 cut(s) 945
BsrGI TGTACA 1 cut(s) 1094
BssAI RCCGGY 1 cut(s) 945
BssECI CCNNGG 1 cut(s) 268
BssMI GATC 3 cut(s) 369, 535, 619
BssT1I CCWWGG 1 cut(s) 268
Bst4CI ACNGT 1 cut(s) 696
Bst6I CTCTTC 2 cut(s) 273, 357
BstAUI TGTACA 1 cut(s) 1094
BstBI TTCGAA 1 cut(s) 63
BstC8I GCNNGC 2 cut(s) 435, 1111
BstDEI CTNAG 1 cut(s) 109
BstF5I GGATG 1 cut(s) 1052
BstKTI GATC 3 cut(s) 372, 538, 622
BstMAI GTCTC 2 cut(s) 675, 1041
BstMBI GATC 3 cut(s) 369, 535, 619
BstNSI RCATGY 2 cut(s) 815, 1095
BstSFI CTRYAG 1 cut(s) 864
BstV1I GCAGC 2 cut(s) 1001, 1071
BstX2I RGATCY 2 cut(s) 369, 535
BstXI CCANNNNNNTGG 1 cut(s) 646
BstYI RGATCY 2 cut(s) 369, 535
BsuRI GGCC 2 cut(s) 602, 949
BtsCI GGATG 1 cut(s) 1052
BtsIMutI CAGTG 1 cut(s) 939
Cac8I GCNNGC 2 cut(s) 435, 1111
Cfr10I RCCGGY 1 cut(s) 945
Csp6I GTAC 1 cut(s) 1095
CviAII CATG 5 cut(s) 779, 812, 955, 973, 1092
CviQI GTAC 1 cut(s) 1095
DdeI CTNAG 1 cut(s) 109
DpnI GATC 3 cut(s) 371, 537, 621
DpnII GATC 3 cut(s) 369, 535, 619
DraI TTTAAA 2 cut(s) 37, 444
EaeI YGGCCR 2 cut(s) 600, 947
Eam1104I CTCTTC 2 cut(s) 273, 357
EarI CTCTTC 2 cut(s) 273, 357
Eco130I CCWWGG 1 cut(s) 268
Eco31I GGTCTC 1 cut(s) 1041
EcoT14I CCWWGG 1 cut(s) 268
ErhI CCWWGG 1 cut(s) 268
FaeI CATG 5 cut(s) 782, 815, 958, 976, 1095
FatI CATG 5 cut(s) 778, 811, 954, 972, 1091
FauI CCCGC 1 cut(s) 1021
FauNDI CATATG 1 cut(s) 658
FblI GTMKAC 1 cut(s) 16
Fnu4HI GCNGC 2 cut(s) 990, 1060
FokI GGATG 1 cut(s) 1039
Fsp4HI GCNGC 2 cut(s) 990, 1060
FspBI CTAG 2 cut(s) 483, 1041
GluI GCNGC 2 cut(s) 990, 1060
GsaI CCCAGC 1 cut(s) 51
HaeIII GGCC 2 cut(s) 602, 949
HapII CCGG 2 cut(s) 674, 946
Hin1II CATG 5 cut(s) 782, 815, 958, 976, 1095
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 6 cut(s) 68, 407, 509, 857, 872, 1036
HpaII CCGG 2 cut(s) 674, 946
HphI GGTGA 2 cut(s) 881, 993
Hpy166II GTNNAC 2 cut(s) 17, 54
Hpy188I TCNGA 4 cut(s) 112, 265, 303, 712
Hpy188III TCNNGA 5 cut(s) 334, 463, 503, 513, 674
Hpy8I GTNNAC 2 cut(s) 17, 54
HpyAV CCTTC 4 cut(s) 683, 1004, 1008, 1058
HpyCH4III ACNGT 1 cut(s) 696
HpyCH4IV ACGT 1 cut(s) 457
HpyCH4V TGCA 5 cut(s) 308, 683, 903, 928, 989
HpyF3I CTNAG 1 cut(s) 109
HpySE526I ACGT 1 cut(s) 457
Hsp92II CATG 5 cut(s) 782, 815, 958, 976, 1095
Kpn2I TCCGGA 1 cut(s) 673
Kzo9I GATC 3 cut(s) 369, 535, 619
LmnI GCTCC 3 cut(s) 203, 318, 1067
LpnPI CCDG 9 cut(s) 33, 60, 319, 616, 687, 725, 753, 959, 1069
Lsp1109I GCAGC 2 cut(s) 1001, 1071
LweI GCATC 1 cut(s) 976
MaeI CTAG 2 cut(s) 483, 1041
MaeII ACGT 1 cut(s) 457
MaeIII GTNAC 1 cut(s) 1087
MalI GATC 3 cut(s) 371, 537, 621
MbiI CCGCTC 1 cut(s) 617
MboI GATC 3 cut(s) 369, 535, 619
MboII GAAGA 8 cut(s) 63, 77, 290, 368, 374, 379, 491, 518
MflI RGATCY 2 cut(s) 369, 535
MhlI GDGCHC 1 cut(s) 439
MlsI TGGCCA 1 cut(s) 602
MluNI TGGCCA 1 cut(s) 602
MlyI GAGTC 2 cut(s) 401, 1045
MmeI TCCRAC 3 cut(s) 340, 631, 787
MnlI CCTC 3 cut(s) 182, 479, 775
Mox20I TGGCCA 1 cut(s) 602
MroI TCCGGA 1 cut(s) 673
MroXI GAANNNNTTC 1 cut(s) 297
MscI TGGCCA 1 cut(s) 602
MseI TTAA 5 cut(s) 36, 285, 420, 443, 518
MslI CAYNNNNRTG 1 cut(s) 919
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 1 cut(s) 47
MspI CCGG 2 cut(s) 674, 946
Mva1269I GAATGC 3 cut(s) 119, 769, 903
NdeI CATATG 1 cut(s) 658
NdeII GATC 3 cut(s) 369, 535, 619
NlaIII CATG 5 cut(s) 782, 815, 958, 976, 1095
NlaIV GGNNCC 1 cut(s) 199
NmuCI GTSAC 1 cut(s) 1087
NspI RCATGY 2 cut(s) 815, 1095
NspV TTCGAA 1 cut(s) 63
OliI CACNNNNGTG 1 cut(s) 919
PciI ACATGT 2 cut(s) 811, 1091
PctI GAATGC 3 cut(s) 119, 769, 903
PdmI GAANNNNTTC 1 cut(s) 297
PfeI GAWTC 4 cut(s) 68, 509, 857, 872
PkrI GCNGC 2 cut(s) 991, 1061
PleI GAGTC 2 cut(s) 401, 1044
PpsI GAGTC 2 cut(s) 401, 1044
PscI ACATGT 2 cut(s) 811, 1091
PsiI TTATAA 2 cut(s) 207, 896
Psp1406I AACGTT 1 cut(s) 457
PspFI CCCAGC 1 cut(s) 47
PspN4I GGNNCC 1 cut(s) 199
PsuI RGATCY 2 cut(s) 369, 535
RsaI GTAC 1 cut(s) 1096
RsaNI GTAC 1 cut(s) 1095
RseI CAYNNNNRTG 1 cut(s) 919
SaqAI TTAA 5 cut(s) 36, 285, 420, 443, 518
SatI GCNGC 2 cut(s) 990, 1060
Sau3AI GATC 3 cut(s) 369, 535, 619
SchI GAGTC 2 cut(s) 401, 1045
SduI GDGCHC 1 cut(s) 439
SfaNI GCATC 1 cut(s) 976
SfcI CTRYAG 1 cut(s) 864
SfuI TTCGAA 1 cut(s) 63
SmiMI CAYNNNNRTG 1 cut(s) 919
SsiI CCGC 5 cut(s) 45, 239, 587, 617, 1014
SspI AATATT 2 cut(s) 29, 609
SspMI CTAG 2 cut(s) 483, 1041
StyI CCWWGG 1 cut(s) 268
TaaI ACNGT 1 cut(s) 696
TaiI ACGT 1 cut(s) 460
TaqI TCGA 3 cut(s) 63, 462, 512
TatI WGTACW 1 cut(s) 1094
TfiI GAWTC 4 cut(s) 68, 509, 857, 872
Tru1I TTAA 5 cut(s) 36, 285, 420, 443, 518
Tru9I TTAA 5 cut(s) 36, 285, 420, 443, 518
TscAI CASTG 1 cut(s) 946
TseFI GTSAC 1 cut(s) 1087
TseI GCWGC 2 cut(s) 989, 1059
Tsp45I GTSAC 1 cut(s) 1087
TspDTI ATGAA 8 cut(s) 21, 116, 306, 375, 396, 403, 438, 849
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 1 cut(s) 946
XapI RAATTY 3 cut(s) 257, 799, 932
XceI RCATGY 2 cut(s) 815, 1095
XmiI GTMKAC 1 cut(s) 16
XmnI GAANNNNTTC 1 cut(s) 297
XspI CTAG 2 cut(s) 483, 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.