pycom05g30520

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
30608762 .. 30610336
1575 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g30520.3

Sequence Viewer

Length: 918 bp
ATGAAATCCATCAAAGGTGTGCTTGATAATGGAAAGGAGATAGCAGTGAAAAGACTAGCCAAGAATTCTGGCCAAGGAATTGGAGAGTTTAAGAATGAAGTTGTGCTGCTTTCAAAGCTCCAACACAGGAACCTTGTGAGGATCATAGGTTGCTGCGTTCAAGATGAAGAGAAGATGCTGATCTATGAATACTTGTCAAACAAAAGTCTTGACTTTTTCATTTTCGCAAAAGAGGCGTTGTTGGATTGGACAAGACGCTTTGAGATAATCTGTGGGATTGCTAGAGGGATCTTATATCTTCATCAGGATTCGAGATTAAGAATCATCCATAGAGATCTAAAGGTCAGCAATGTTCTGTTGGATTCTGCTATGAACCCCAAGATTTCAGATTTTGGTATGGCTAGGATATTTGGAGCTGAACAAATTGAAGCAAATACAAACCGTGTGGTTGGGACATACGGTTATATGTCACCAGAGTACGCAATGGAAGGATTTTTTTCAGTAAAGTCTGACGTATATAGCTTCGGCGTTTTACTACTAGAAATTGTTACTGGCAGAAAGAACATTGGCTACTACCACGATAGTCCTTACTCAAATTTAGTTGGACATGTTTGGGACTTGTGGAAGGAAAATAGAGCCTTGGAAATCATTGATTCATCTCTCGGAGAATCATACCCTGTCAACAAAGTTCTAAGATGTATTCACATTGCCCTCTTATGCGTGCAAGAGCAAGCGAAGGATCGTCCACTCATGTCAGCAGTGGTTTCCATGTTGGGTAATGATGCAGCAATTCCTTCACCAAAGCAACCTGGATTTTTGTTGAACAGAGGTTATCATACTGGTGGAAACCCATCATCCAATATTGATGGAGCTTACTCTGTAAATGACATGACCTATACAGAAGCAGAAGGTCGCTAA

Protein Analysis

306

Amino Acids

34.25

Weight (kDa)

7.05

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 149, 296, 747
AcoI YGGCCR 1 cut(s) 70
AcsI RAATTY 2 cut(s) 64, 595
AfaI GTAC 1 cut(s) 479
AflIII ACRYGT 1 cut(s) 607
AgsI TTSAA 4 cut(s) 114, 161, 428, 823
AjnI CCWGG 1 cut(s) 808
AluBI AGCT 4 cut(s) 118, 416, 522, 872
AluI AGCT 4 cut(s) 118, 416, 522, 872
AlwI GGATC 3 cut(s) 149, 296, 747
AoxI GGCC 1 cut(s) 70
ApeKI GCWGC 3 cut(s) 106, 153, 785
ApoI RAATTY 2 cut(s) 64, 595
AsuHPI GGTGA 2 cut(s) 462, 789
BalI TGGCCA 1 cut(s) 72
BbvI GCAGC 3 cut(s) 93, 140, 797
BccI CCATC 3 cut(s) 17, 859, 860
BciT130I CCWGG 1 cut(s) 810
BfaI CTAG 4 cut(s) 56, 282, 402, 539
BglII AGATCT 1 cut(s) 334
BisI GCNGC 3 cut(s) 107, 154, 786
BlsI GCNGC 3 cut(s) 108, 155, 787
Bme1390I CCNGG 1 cut(s) 810
BmiI GGNNCC 1 cut(s) 131
BmrFI CCNGG 1 cut(s) 810
BmsI GCATC 2 cut(s) 165, 772
BsaBI GATNNNNATC 1 cut(s) 179
BsaJI CCNNGG 2 cut(s) 73, 639
Bse1I ACTGG 2 cut(s) 556, 844
Bse3DI GCAATG 3 cut(s) 355, 489, 705
Bse8I GATNNNNATC 1 cut(s) 179
BseBI CCWGG 1 cut(s) 810
BseDI CCNNGG 2 cut(s) 73, 639
BseGI GGATG 2 cut(s) 324, 854
BseJI GATNNNNATC 1 cut(s) 179
BseMI GCAATG 3 cut(s) 355, 489, 705
BseNI ACTGG 2 cut(s) 556, 844
BseXI GCAGC 3 cut(s) 93, 140, 797
BshFI GGCC 1 cut(s) 72
BslFI GGGAC 2 cut(s) 466, 629
BsmFI GGGAC 2 cut(s) 466, 629
BsnI GGCC 1 cut(s) 72
Bsp143I GATC 5 cut(s) 141, 180, 288, 334, 739
BspANI GGCC 1 cut(s) 72
BspLI GGNNCC 1 cut(s) 131
BspPI GGATC 3 cut(s) 149, 296, 747
BsrDI GCAATG 3 cut(s) 355, 489, 705
BsrI ACTGG 2 cut(s) 556, 844
BssECI CCNNGG 2 cut(s) 73, 639
BssMI GATC 5 cut(s) 141, 180, 288, 334, 739
BssT1I CCWWGG 2 cut(s) 73, 639
Bst2UI CCWGG 1 cut(s) 810
Bst4CI ACNGT 2 cut(s) 443, 461
Bst6I CTCTTC 1 cut(s) 162
BstC8I GCNNGC 2 cut(s) 722, 732
BstDEI CTNAG 1 cut(s) 692
BstF5I GGATG 2 cut(s) 324, 854
BstKTI GATC 5 cut(s) 144, 183, 291, 337, 742
BstMBI GATC 5 cut(s) 141, 180, 288, 334, 739
BstMWI GCNNNNNNNGC 2 cut(s) 115, 233
BstNI CCWGG 1 cut(s) 810
BstNSI RCATGY 1 cut(s) 611
BstSCI CCNGG 1 cut(s) 808
BstV1I GCAGC 3 cut(s) 93, 140, 797
BstX2I RGATCY 2 cut(s) 288, 334
BstXI CCANNNNNNTGG 1 cut(s) 80
BstYI RGATCY 2 cut(s) 288, 334
BsuRI GGCC 1 cut(s) 72
BtsCI GGATG 2 cut(s) 324, 854
BtsI GCAGTG 2 cut(s) 51, 765
BtsIMutI CAGTG 2 cut(s) 51, 765
Cac8I GCNNGC 2 cut(s) 722, 732
CseI GACGC 1 cut(s) 264
Csp6I GTAC 1 cut(s) 478
CspCI CAANNNNNGTGG 2 cut(s) 426, 461
CviAII CATG 4 cut(s) 608, 751, 769, 889
CviJI RGCY 9 cut(s) 59, 72, 118, 401, 416, 522, 570, 638, 872
CviKI_1 RGCY 9 cut(s) 59, 72, 118, 401, 416, 522, 570, 638, 872
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 1 cut(s) 692
DpnI GATC 5 cut(s) 143, 182, 290, 336, 741
DpnII GATC 5 cut(s) 141, 180, 288, 334, 739
EaeI YGGCCR 1 cut(s) 70
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Eco130I CCWWGG 2 cut(s) 73, 639
EcoRI GAATTC 1 cut(s) 64
EcoRII CCWGG 1 cut(s) 808
EcoT14I CCWWGG 2 cut(s) 73, 639
ErhI CCWWGG 2 cut(s) 73, 639
FaeI CATG 4 cut(s) 611, 754, 772, 892
FalI AAGNNNNNCTT 1 cut(s) 38
FaqI GGGAC 2 cut(s) 466, 629
FatI CATG 4 cut(s) 607, 750, 768, 888
Fnu4HI GCNGC 3 cut(s) 107, 154, 786
FokI GGATG 2 cut(s) 311, 841
Fsp4HI GCNGC 3 cut(s) 107, 154, 786
FspBI CTAG 4 cut(s) 56, 282, 402, 539
GluI GCNGC 3 cut(s) 107, 154, 786
HaeIII GGCC 1 cut(s) 72
HgaI GACGC 1 cut(s) 264
Hin1II CATG 4 cut(s) 611, 754, 772, 892
HincII GTYRAC 1 cut(s) 682
HindII GTYRAC 1 cut(s) 682
HinfI GANTC 5 cut(s) 308, 321, 362, 653, 668
HphI GGTGA 2 cut(s) 462, 789
Hpy166II GTNNAC 2 cut(s) 682, 746
Hpy188I TCNGA 3 cut(s) 388, 511, 665
Hpy188III TCNNGA 4 cut(s) 161, 209, 305, 312
Hpy8I GTNNAC 2 cut(s) 682, 746
HpyAV CCTTC 5 cut(s) 482, 619, 730, 804, 902
HpyCH4III ACNGT 2 cut(s) 443, 461
HpyCH4IV ACGT 1 cut(s) 513
HpyCH4V TGCA 2 cut(s) 724, 785
HpyF10VI GCNNNNNNNGC 2 cut(s) 115, 233
HpyF3I CTNAG 1 cut(s) 692
HpySE526I ACGT 1 cut(s) 513
Hsp92II CATG 4 cut(s) 611, 754, 772, 892
Kzo9I GATC 5 cut(s) 141, 180, 288, 334, 739
LmnI GCTCC 3 cut(s) 123, 413, 869
LpnPI CCDG 9 cut(s) 54, 112, 290, 486, 537, 690, 795, 822, 825
Lsp1109I GCAGC 3 cut(s) 93, 140, 797
LweI GCATC 2 cut(s) 165, 772
MaeI CTAG 4 cut(s) 56, 282, 402, 539
MaeII ACGT 1 cut(s) 513
MaeIII GTNAC 2 cut(s) 468, 547
MalI GATC 5 cut(s) 143, 182, 290, 336, 741
MboI GATC 5 cut(s) 141, 180, 288, 334, 739
MboII GAAGA 3 cut(s) 179, 184, 290
MflI RGATCY 2 cut(s) 288, 334
MlsI TGGCCA 1 cut(s) 72
MluCI AATT 6 cut(s) 64, 78, 423, 543, 595, 789
MluNI TGGCCA 1 cut(s) 72
MmeI TCCRAC 4 cut(s) 145, 222, 339, 583
MnlI CCTC 5 cut(s) 132, 226, 278, 722, 821
Mox20I TGGCCA 1 cut(s) 72
MscI TGGCCA 1 cut(s) 72
MseI TTAA 2 cut(s) 90, 317
MslI CAYNNNNRTG 1 cut(s) 840
Msp20I TGGCCA 1 cut(s) 72
MspR9I CCNGG 1 cut(s) 810
MvaI CCWGG 1 cut(s) 810
MwoI GCNNNNNNNGC 2 cut(s) 115, 233
NdeII GATC 5 cut(s) 141, 180, 288, 334, 739
NlaIII CATG 4 cut(s) 611, 754, 772, 892
NlaIV GGNNCC 1 cut(s) 131
NmuCI GTSAC 1 cut(s) 468
NspI RCATGY 1 cut(s) 611
PciI ACATGT 1 cut(s) 607
PfeI GAWTC 5 cut(s) 308, 321, 362, 653, 668
PkrI GCNGC 3 cut(s) 108, 155, 787
PscI ACATGT 1 cut(s) 607
Psp6I CCWGG 1 cut(s) 808
PspGI CCWGG 1 cut(s) 808
PspN4I GGNNCC 1 cut(s) 131
PsrI GAACNNNNNNTAC 2 cut(s) 554, 586
PsuI RGATCY 2 cut(s) 288, 334
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
RseI CAYNNNNRTG 1 cut(s) 840
SaqAI TTAA 2 cut(s) 90, 317
SatI GCNGC 3 cut(s) 107, 154, 786
Sau3AI GATC 5 cut(s) 141, 180, 288, 334, 739
ScrFI CCNGG 1 cut(s) 810
SfaNI GCATC 2 cut(s) 165, 772
SmiMI CAYNNNNRTG 1 cut(s) 840
Sse9I AATT 6 cut(s) 64, 78, 423, 543, 595, 789
SspI AATATT 1 cut(s) 862
SspMI CTAG 4 cut(s) 56, 282, 402, 539
StyD4I CCNGG 1 cut(s) 808
StyI CCWWGG 2 cut(s) 73, 639
TaaI ACNGT 2 cut(s) 443, 461
TaiI ACGT 1 cut(s) 516
TaqI TCGA 1 cut(s) 311
TasI AATT 6 cut(s) 64, 78, 423, 543, 595, 789
TfiI GAWTC 5 cut(s) 308, 321, 362, 653, 668
Tru1I TTAA 2 cut(s) 90, 317
Tru9I TTAA 2 cut(s) 90, 317
TscAI CASTG 2 cut(s) 51, 765
TseFI GTSAC 1 cut(s) 468
TseI GCWGC 3 cut(s) 106, 153, 785
Tsp45I GTSAC 1 cut(s) 468
TspDTI ATGAA 8 cut(s) 17, 111, 180, 201, 208, 290, 386, 645
TspRI CASTG 2 cut(s) 51, 765
XapI RAATTY 2 cut(s) 64, 595
XceI RCATGY 1 cut(s) 611
XspI CTAG 4 cut(s) 56, 282, 402, 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.