Rmu_sc0000593.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000593.1
Physical Location & Seq
Forward (+)
1 .. 1398
1398 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000593.1_g000001.1.cds

Sequence Viewer

Length: 450 bp
ggagtgctttcttgtggaacagaaatagctgtgaaaagactaagcaaaaattctggccagggaaatgaagagttcaaaaatgaagttgtgctgattgcaaaacttcaacacaggaaccttgtgagaatcttaggctattgcgttcaagatgaagagaagatgctaatctatgaatacctgcctaacaaaagcctggactccatcattttcaatgaaatgaaaaggacatctctggattggacaagacgcttggagattatctttggcattgctagagggatcttgtatcttcatcaagattcgagattaagaatcatccacagagacctaaaggccagcaatattctactggattatgatatgaaccctaaaattgcagattttggtgtggctagaatattcggagcaaaccaaattgaagcaaatacaaatcgcgtggttggaacatag

Protein Analysis

149

Amino Acids

17.06

Weight (kDa)

8.93

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 186
AccII CGCG 1 cut(s) 435
AclWI GGATC 1 cut(s) 287
AcoI YGGCCR 1 cut(s) 55
AcsI RAATTY 1 cut(s) 49
AgsI TTSAA 5 cut(s) 76, 107, 146, 211, 419
AjnI CCWGG 2 cut(s) 57, 192
AluBI AGCT 1 cut(s) 29
AluI AGCT 1 cut(s) 29
Alw26I GTCTC 1 cut(s) 318
AlwI GGATC 1 cut(s) 287
AoxI GGCC 2 cut(s) 55, 333
ApoI RAATTY 1 cut(s) 49
BalI TGGCCA 1 cut(s) 57
BccI CCATC 1 cut(s) 209
BciT130I CCWGG 2 cut(s) 59, 194
BcoDI GTCTC 1 cut(s) 318
BfaI CTAG 2 cut(s) 273, 393
BfuAI ACCTGC 1 cut(s) 186
Bme1390I CCNGG 2 cut(s) 59, 194
BmiI GGNNCC 1 cut(s) 116
BmrFI CCNGG 2 cut(s) 59, 194
BmsI GCATC 1 cut(s) 150
BsaBI GATNNNNATC 1 cut(s) 164
BsaI GGTCTC 1 cut(s) 318
BsaJI CCNNGG 1 cut(s) 58
Bse1I ACTGG 1 cut(s) 354
Bse3DI GCAATG 1 cut(s) 267
Bse8I GATNNNNATC 1 cut(s) 164
BseBI CCWGG 2 cut(s) 59, 194
BseDI CCNNGG 1 cut(s) 58
BseGI GGATG 1 cut(s) 315
BseJI GATNNNNATC 1 cut(s) 164
BseMI GCAATG 1 cut(s) 267
BseNI ACTGG 1 cut(s) 354
Bsh1236I CGCG 1 cut(s) 435
BshFI GGCC 2 cut(s) 57, 335
BsmAI GTCTC 1 cut(s) 318
BsnI GGCC 2 cut(s) 57, 335
Bso31I GGTCTC 1 cut(s) 318
Bsp143I GATC 1 cut(s) 279
BspANI GGCC 2 cut(s) 57, 335
BspFNI CGCG 1 cut(s) 435
BspLI GGNNCC 1 cut(s) 116
BspMI ACCTGC 1 cut(s) 186
BspPI GGATC 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 318
BsrDI GCAATG 1 cut(s) 267
BsrI ACTGG 1 cut(s) 354
BssECI CCNNGG 1 cut(s) 58
BssMI GATC 1 cut(s) 279
Bst2UI CCWGG 2 cut(s) 59, 194
Bst6I CTCTTC 2 cut(s) 63, 147
BstC8I GCNNGC 1 cut(s) 337
BstDEI CTNAG 2 cut(s) 41, 130
BstF5I GGATG 1 cut(s) 315
BstFNI CGCG 1 cut(s) 435
BstKTI GATC 1 cut(s) 282
BstMAI GTCTC 1 cut(s) 318
BstMBI GATC 1 cut(s) 279
BstNI CCWGG 2 cut(s) 59, 194
BstSCI CCNGG 2 cut(s) 57, 192
BstUI CGCG 1 cut(s) 435
BstX2I RGATCY 1 cut(s) 279
BstYI RGATCY 1 cut(s) 279
BsuRI GGCC 2 cut(s) 57, 335
BtsCI GGATG 1 cut(s) 315
BveI ACCTGC 1 cut(s) 186
Cac8I GCNNGC 1 cut(s) 337
CseI GACGC 1 cut(s) 255
CspCI CAANNNNNGTGG 1 cut(s) 417
CviJI RGCY 6 cut(s) 29, 57, 135, 192, 335, 392
CviKI_1 RGCY 6 cut(s) 29, 57, 135, 192, 335, 392
DdeI CTNAG 2 cut(s) 41, 130
DpnI GATC 1 cut(s) 281
DpnII GATC 1 cut(s) 279
EaeI YGGCCR 1 cut(s) 55
Eam1104I CTCTTC 2 cut(s) 63, 147
EarI CTCTTC 2 cut(s) 63, 147
Eco31I GGTCTC 1 cut(s) 318
EcoRII CCWGG 2 cut(s) 57, 192
FaiI YATR 4 cut(s) 171, 357, 362, 448
FokI GGATG 1 cut(s) 302
FspBI CTAG 2 cut(s) 273, 393
HaeIII GGCC 2 cut(s) 57, 335
HgaI GACGC 1 cut(s) 255
HinfI GANTC 4 cut(s) 126, 197, 299, 312
Hpy188I TCNGA 1 cut(s) 404
Hpy188III TCNNGA 4 cut(s) 146, 233, 296, 303
HpyCH4V TGCA 2 cut(s) 98, 377
HpyF3I CTNAG 2 cut(s) 41, 130
Kzo9I GATC 1 cut(s) 279
LmnI GCTCC 1 cut(s) 404
LweI GCATC 1 cut(s) 150
MaeI CTAG 2 cut(s) 273, 393
MalI GATC 1 cut(s) 281
MboI GATC 1 cut(s) 279
MboII GAAGA 4 cut(s) 80, 164, 169, 281
MflI RGATCY 1 cut(s) 279
MlsI TGGCCA 1 cut(s) 57
MluCI AATT 3 cut(s) 49, 372, 414
MluNI TGGCCA 1 cut(s) 57
MlyI GAGTC 1 cut(s) 191
MmeI TCCRAC 1 cut(s) 421
MnlI CCTC 1 cut(s) 269
Mox20I TGGCCA 1 cut(s) 57
MscI TGGCCA 1 cut(s) 57
MseI TTAA 1 cut(s) 308
Msp20I TGGCCA 1 cut(s) 57
MspR9I CCNGG 2 cut(s) 59, 194
MvaI CCWGG 2 cut(s) 59, 194
MvnI CGCG 1 cut(s) 435
NdeII GATC 1 cut(s) 279
NlaIV GGNNCC 1 cut(s) 116
PfeI GAWTC 3 cut(s) 126, 299, 312
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
Psp6I CCWGG 2 cut(s) 57, 192
PspGI CCWGG 2 cut(s) 57, 192
PspN4I GGNNCC 1 cut(s) 116
PsuI RGATCY 1 cut(s) 279
SaqAI TTAA 1 cut(s) 308
Sau3AI GATC 1 cut(s) 279
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 2 cut(s) 59, 194
SetI ASST 4 cut(s) 31, 120, 180, 330
SfaNI GCATC 1 cut(s) 150
Sse9I AATT 3 cut(s) 49, 372, 414
SspI AATATT 2 cut(s) 343, 399
SspMI CTAG 2 cut(s) 273, 393
StyD4I CCNGG 2 cut(s) 57, 192
TaqI TCGA 1 cut(s) 302
TasI AATT 3 cut(s) 49, 372, 414
TfiI GAWTC 3 cut(s) 126, 299, 312
Tru1I TTAA 1 cut(s) 308
Tru9I TTAA 1 cut(s) 308
TspDTI ATGAA 8 cut(s) 81, 96, 165, 186, 228, 233, 281, 377
XapI RAATTY 1 cut(s) 49
XspI CTAG 2 cut(s) 273, 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.