RchiOBHm_Chr5g0035631

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
29665191 .. 29666838
1648 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31447

Sequence Viewer

Length: 1113 bp
ATGAAATATCATCTCATGCAAAATAAATATCCATTTGAACTTACTGCTGGGTTAACCTACTTTGAAGAAGCTACTGGTGGATTAGCTCTTGATGATAGTAGAATAAACTCAGAGTTACTATTATTTCATCTAAACACCGTAGCCACAGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTACGATGGAAAGGAAATAGCTGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGAAGAAGAGAAGATTCTAATATATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAACCAAGAAGAGCACTTTTAAGTTGGAAAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGGCTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCGAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAACACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGAAAGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGCATAAAGAATGCCGGTTCCTATGAGAAGCATCCATATTCAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCTGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATAATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCGGCAGTCGTTTCAATGTTAAGTAATGATGCAGCTCTTCCTTCACCAAGACGACCCACACTTTTACTGACAACAATGAGTCCTAGTGGAGACCCATCCAGCAACAAAGGAGGTAGTTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA

Protein Analysis

370

Amino Acids

41.44

Weight (kDa)

6.22

Isoelectric Point (pI)

46.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 55 - 324 1.2e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 55 - 322 8.8e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AcoI YGGCCR 2 cut(s) 265, 944
AcsI RAATTY 2 cut(s) 796, 929
AcuI CTGAAG 1 cut(s) 648
AfaI GTAC 1 cut(s) 1093
AflIII ACRYGT 2 cut(s) 808, 1088
AjuI GAANNNNNNNTTGG 4 cut(s) 162, 177, 194, 209
AleI CACNNNNGTG 1 cut(s) 916
AluBI AGCT 7 cut(s) 71, 86, 178, 239, 839, 989, 1106
AluI AGCT 7 cut(s) 71, 86, 178, 239, 839, 989, 1106
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 1 cut(s) 1038
AoxI GGCC 3 cut(s) 265, 543, 944
ApeKI GCWGC 1 cut(s) 986
ApoI RAATTY 2 cut(s) 796, 929
Asp700I GAANNNNTTC 1 cut(s) 297
AsuHPI GGTGA 3 cut(s) 663, 878, 990
BalI TGGCCA 1 cut(s) 267
Bbv12I GWGCWC 1 cut(s) 439
BbvI GCAGC 1 cut(s) 998
BccI CCATC 2 cut(s) 218, 1057
BcgI CGANNNNNNTGC 2 cut(s) 889, 923
BciVI GTATCC 1 cut(s) 207
BcoDI GTCTC 1 cut(s) 1038
BfaI CTAG 4 cut(s) 483, 603, 740, 1038
BfmI CTRYAG 1 cut(s) 861
BfuI GTATCC 1 cut(s) 207
BglII AGATCT 1 cut(s) 535
BisI GCNGC 1 cut(s) 987
BlsI GCNGC 1 cut(s) 988
BmiI GGNNCC 2 cut(s) 199, 772
BmsI GCATC 2 cut(s) 793, 973
BsaI GGTCTC 1 cut(s) 1038
BsaJI CCNNGG 1 cut(s) 268
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bse118I RCCGGY 2 cut(s) 767, 942
Bse1I ACTGG 2 cut(s) 79, 757
Bse3DI GCAATG 2 cut(s) 556, 690
BseDI CCNNGG 1 cut(s) 268
BseGI GGATG 2 cut(s) 784, 1049
BseMI GCAATG 2 cut(s) 556, 690
BseMII CTCAG 1 cut(s) 123
BseNI ACTGG 2 cut(s) 79, 757
BseXI GCAGC 1 cut(s) 998
BseYI CCCAGC 1 cut(s) 47
BshFI GGCC 3 cut(s) 267, 545, 946
BsiHKAI GWGCWC 1 cut(s) 439
BsiSI CCGG 2 cut(s) 768, 943
BsmAI GTCTC 1 cut(s) 1038
BsmI GAATGC 2 cut(s) 769, 900
BsnI GGCC 3 cut(s) 267, 545, 946
Bso31I GGTCTC 1 cut(s) 1038
Bsp1286I GDGCHC 1 cut(s) 439
Bsp1407I TGTACA 1 cut(s) 1091
Bsp143I GATC 1 cut(s) 535
BspANI GGCC 3 cut(s) 267, 545, 946
BspCNI CTCAG 1 cut(s) 122
BspHI TCATGA 1 cut(s) 502
BspLI GGNNCC 2 cut(s) 199, 772
BspQI GCTCTTC 2 cut(s) 427, 996
BspTNI GGTCTC 1 cut(s) 1038
BsrDI GCAATG 2 cut(s) 556, 690
BsrFI RCCGGY 2 cut(s) 767, 942
BsrGI TGTACA 1 cut(s) 1091
BsrI ACTGG 2 cut(s) 79, 757
BssAI RCCGGY 2 cut(s) 767, 942
BssECI CCNNGG 1 cut(s) 268
BssMI GATC 1 cut(s) 535
BssT1I CCWWGG 1 cut(s) 268
Bst4CI ACNGT 2 cut(s) 139, 696
Bst6I CTCTTC 4 cut(s) 273, 357, 427, 996
BstAUI TGTACA 1 cut(s) 1091
BstC8I GCNNGC 2 cut(s) 547, 1108
BstDEI CTNAG 2 cut(s) 109, 518
BstF5I GGATG 2 cut(s) 784, 1049
BstKTI GATC 1 cut(s) 538
BstMAI GTCTC 1 cut(s) 1038
BstMBI GATC 1 cut(s) 535
BstNSI RCATGY 2 cut(s) 812, 1092
BstSFI CTRYAG 1 cut(s) 861
BstV1I GCAGC 1 cut(s) 998
BstX2I RGATCY 1 cut(s) 535
BstYI RGATCY 1 cut(s) 535
BsuI GTATCC 1 cut(s) 207
BsuRI GGCC 3 cut(s) 267, 545, 946
BtsCI GGATG 2 cut(s) 784, 1049
Cac8I GCNNGC 2 cut(s) 547, 1108
CciI TCATGA 1 cut(s) 502
Cfr10I RCCGGY 2 cut(s) 767, 942
CseI GACGC 1 cut(s) 465
Csp6I GTAC 1 cut(s) 1092
CspCI CAANNNNNGTGG 2 cut(s) 627, 662
CviAII CATG 5 cut(s) 16, 503, 809, 952, 1089
CviQI GTAC 1 cut(s) 1092
DdeI CTNAG 2 cut(s) 109, 518
DpnI GATC 1 cut(s) 537
DpnII GATC 1 cut(s) 535
EaeI YGGCCR 2 cut(s) 265, 944
Eam1104I CTCTTC 4 cut(s) 273, 357, 427, 996
EarI CTCTTC 4 cut(s) 273, 357, 427, 996
Eco130I CCWWGG 1 cut(s) 268
Eco31I GGTCTC 1 cut(s) 1038
Eco57I CTGAAG 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 268
ErhI CCWWGG 1 cut(s) 268
FaeI CATG 5 cut(s) 19, 506, 812, 955, 1092
FatI CATG 5 cut(s) 15, 502, 808, 951, 1088
FauNDI CATATG 1 cut(s) 658
Fnu4HI GCNGC 1 cut(s) 987
FokI GGATG 2 cut(s) 771, 1036
Fsp4HI GCNGC 1 cut(s) 987
FspBI CTAG 4 cut(s) 483, 603, 740, 1038
GluI GCNGC 1 cut(s) 987
GsaI CCCAGC 1 cut(s) 51
HaeIII GGCC 3 cut(s) 267, 545, 946
HapII CCGG 2 cut(s) 768, 943
HgaI GACGC 1 cut(s) 465
Hin1II CATG 5 cut(s) 19, 506, 812, 955, 1092
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 6 cut(s) 370, 407, 509, 854, 869, 1033
HpaI GTTAAC 1 cut(s) 54
HpaII CCGG 2 cut(s) 768, 943
HphI GGTGA 3 cut(s) 663, 878, 990
Hpy166II GTNNAC 1 cut(s) 54
Hpy188I TCNGA 3 cut(s) 112, 303, 712
Hpy188III TCNNGA 4 cut(s) 89, 463, 503, 513
Hpy8I GTNNAC 1 cut(s) 54
HpyAV CCTTC 3 cut(s) 179, 824, 1005
HpyCH4III ACNGT 2 cut(s) 139, 696
HpyCH4V TGCA 7 cut(s) 19, 308, 587, 683, 900, 925, 986
HpyF3I CTNAG 2 cut(s) 109, 518
Hsp92II CATG 5 cut(s) 19, 506, 812, 955, 1092
KspAI GTTAAC 1 cut(s) 54
Kzo9I GATC 1 cut(s) 535
LguI GCTCTTC 2 cut(s) 427, 996
LmnI GCTCC 2 cut(s) 203, 619
Lsp1109I GCAGC 1 cut(s) 998
LweI GCATC 2 cut(s) 793, 973
MaeI CTAG 4 cut(s) 483, 603, 740, 1038
MaeIII GTNAC 3 cut(s) 114, 669, 1084
MalI GATC 1 cut(s) 537
MboI GATC 1 cut(s) 535
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 1 cut(s) 439
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 6 cut(s) 157, 522, 565, 796, 929, 1095
MluNI TGGCCA 1 cut(s) 267
MlyI GAGTC 2 cut(s) 401, 1042
MmeI TCCRAC 3 cut(s) 340, 428, 631
MnlI CCTC 4 cut(s) 182, 479, 608, 1058
Mox20I TGGCCA 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 297
MscI TGGCCA 1 cut(s) 267
MseI TTAA 6 cut(s) 53, 285, 333, 420, 443, 974
MslI CAYNNNNRTG 1 cut(s) 916
Msp20I TGGCCA 1 cut(s) 267
MspI CCGG 2 cut(s) 768, 943
MunI CAATTG 1 cut(s) 1095
Mva1269I GAATGC 2 cut(s) 769, 900
NdeI CATATG 1 cut(s) 658
NdeII GATC 1 cut(s) 535
NlaIII CATG 5 cut(s) 19, 506, 812, 955, 1092
NlaIV GGNNCC 2 cut(s) 199, 772
NmuCI GTSAC 2 cut(s) 669, 1084
NspI RCATGY 2 cut(s) 812, 1092
OliI CACNNNNGTG 1 cut(s) 916
PagI TCATGA 1 cut(s) 502
PciI ACATGT 2 cut(s) 808, 1088
PciSI GCTCTTC 2 cut(s) 427, 996
PctI GAATGC 2 cut(s) 769, 900
PdmI GAANNNNTTC 1 cut(s) 297
PfeI GAWTC 4 cut(s) 370, 509, 854, 869
PkrI GCNGC 1 cut(s) 988
PleI GAGTC 2 cut(s) 401, 1041
PpsI GAGTC 2 cut(s) 401, 1041
PscI ACATGT 2 cut(s) 808, 1088
PsiI TTATAA 1 cut(s) 207
PspFI CCCAGC 1 cut(s) 47
PspN4I GGNNCC 2 cut(s) 199, 772
PsuI RGATCY 1 cut(s) 535
RsaI GTAC 1 cut(s) 1093
RsaNI GTAC 1 cut(s) 1092
RseI CAYNNNNRTG 1 cut(s) 916
SapI GCTCTTC 2 cut(s) 427, 996
SaqAI TTAA 6 cut(s) 53, 285, 333, 420, 443, 974
SatI GCNGC 1 cut(s) 987
Sau3AI GATC 1 cut(s) 535
SchI GAGTC 2 cut(s) 401, 1042
SduI GDGCHC 1 cut(s) 439
SfaNI GCATC 2 cut(s) 793, 973
SfcI CTRYAG 1 cut(s) 861
SmiMI CAYNNNNRTG 1 cut(s) 916
Sse9I AATT 6 cut(s) 157, 522, 565, 796, 929, 1095
SspI AATATT 1 cut(s) 609
SspMI CTAG 4 cut(s) 483, 603, 740, 1038
StyI CCWWGG 1 cut(s) 268
TaaI ACNGT 2 cut(s) 139, 696
TaqI TCGA 1 cut(s) 462
TasI AATT 6 cut(s) 157, 522, 565, 796, 929, 1095
TatI WGTACW 1 cut(s) 1091
TfiI GAWTC 4 cut(s) 370, 509, 854, 869
Tru1I TTAA 6 cut(s) 53, 285, 333, 420, 443, 974
Tru9I TTAA 6 cut(s) 53, 285, 333, 420, 443, 974
TseFI GTSAC 2 cut(s) 669, 1084
TseI GCWGC 1 cut(s) 986
Tsp45I GTSAC 2 cut(s) 669, 1084
TspGWI ACGGA 1 cut(s) 190
XapI RAATTY 2 cut(s) 796, 929
XceI RCATGY 2 cut(s) 812, 1092
XmnI GAANNNNTTC 1 cut(s) 297
XspI CTAG 4 cut(s) 483, 603, 740, 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.