MD05G1332500.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45606284 .. 45607920
1637 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1332500.v1.1.491

Sequence Viewer

Length: 285 bp
ATGCTAGATGTTGTATTCATGCTGGGGAATGAAACGAATCTTCCACATCCAAAAAGGCAGCGTCTAGCTTCAAAACCGGCGACGTATCCTGGTCACGAGGTTTCAAGATGCATCCACATCGGGCAACTTTGCGTGCAAGAAAGTGCATCAGATAGGCCAACCATGTCCGAAGTTTTCTTCTGTTGGGTAATAAAACAACTCTTCCCTCTCCCAAGAAACTTGCTTTTATATTACAATCCAACAATCCAAACTCAGCAGTGTCAAACAGAGGAGCTTCCTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

95

Amino Acids

10.86

Weight (kDa)

6.81

Isoelectric Point (pI)

52.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 72, 105
AjnI CCWGG 1 cut(s) 88
AluBI AGCT 2 cut(s) 68, 274
AluI AGCT 2 cut(s) 68, 274
AoxI GGCC 1 cut(s) 155
ApeKI GCWGC 1 cut(s) 58
BauI CACGAG 1 cut(s) 95
BbvI GCAGC 1 cut(s) 70
BcgI CGANNNNNNTGC 2 cut(s) 100, 134
BciT130I CCWGG 1 cut(s) 90
BciVI GTATCC 1 cut(s) 96
BfaI CTAG 2 cut(s) 5, 65
BfuI GTATCC 1 cut(s) 96
BisI GCNGC 1 cut(s) 59
BlsI GCNGC 1 cut(s) 60
Bme1390I CCNGG 1 cut(s) 90
BmrFI CCNGG 1 cut(s) 90
BmsI GCATC 3 cut(s) 98, 120, 155
Bse118I RCCGGY 1 cut(s) 76
BseBI CCWGG 1 cut(s) 90
BseGI GGATG 2 cut(s) 46, 111
BseMII CTCAG 1 cut(s) 266
BseRI GAGGAG 1 cut(s) 284
BseXI GCAGC 1 cut(s) 70
BseYI CCCAGC 1 cut(s) 22
BshFI GGCC 1 cut(s) 157
BsiSI CCGG 1 cut(s) 77
BsnI GGCC 1 cut(s) 157
BspANI GGCC 1 cut(s) 157
BspCNI CTCAG 1 cut(s) 265
BsrFI RCCGGY 1 cut(s) 76
BssAI RCCGGY 1 cut(s) 76
BssSI CACGAG 1 cut(s) 95
Bst2BI CACGAG 1 cut(s) 95
Bst2UI CCWGG 1 cut(s) 90
Bst6I CTCTTC 1 cut(s) 206
BstC8I GCNNGC 1 cut(s) 134
BstDEI CTNAG 1 cut(s) 252
BstF5I GGATG 2 cut(s) 46, 111
BstNI CCWGG 1 cut(s) 90
BstSCI CCNGG 1 cut(s) 88
BstV1I GCAGC 1 cut(s) 70
BsuI GTATCC 1 cut(s) 96
BsuRI GGCC 1 cut(s) 157
BtsCI GGATG 2 cut(s) 46, 111
BtsI GCAGTG 1 cut(s) 263
BtsIMutI CAGTG 1 cut(s) 263
Cac8I GCNNGC 1 cut(s) 134
Cfr10I RCCGGY 1 cut(s) 76
CseI GACGC 1 cut(s) 50
CviAII CATG 2 cut(s) 19, 163
CviJI RGCY 3 cut(s) 68, 157, 274
CviKI_1 RGCY 3 cut(s) 68, 157, 274
DdeI CTNAG 1 cut(s) 252
Eam1104I CTCTTC 1 cut(s) 206
EarI CTCTTC 1 cut(s) 206
EcoRII CCWGG 1 cut(s) 88
EcoT22I ATGCAT 1 cut(s) 113
FaeI CATG 2 cut(s) 22, 166
FaiI YATR 3 cut(s) 20, 164, 229
FatI CATG 2 cut(s) 18, 162
Fnu4HI GCNGC 1 cut(s) 59
FokI GGATG 2 cut(s) 33, 98
Fsp4HI GCNGC 1 cut(s) 59
FspBI CTAG 2 cut(s) 5, 65
GluI GCNGC 1 cut(s) 59
GsaI CCCAGC 1 cut(s) 26
HaeIII GGCC 1 cut(s) 157
HapII CCGG 1 cut(s) 77
HgaI GACGC 1 cut(s) 50
Hin1II CATG 2 cut(s) 22, 166
HinfI GANTC 1 cut(s) 37
HpaII CCGG 1 cut(s) 77
Hpy188I TCNGA 2 cut(s) 151, 169
Hpy188III TCNNGA 2 cut(s) 95, 105
Hpy99I CGWCG 1 cut(s) 85
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 3 cut(s) 111, 136, 146
HpyF3I CTNAG 1 cut(s) 252
HpySE526I ACGT 1 cut(s) 83
Hsp92II CATG 2 cut(s) 22, 166
LmnI GCTCC 1 cut(s) 271
LpnPI CCDG 4 cut(s) 8, 75, 90, 102
Lsp1109I GCAGC 1 cut(s) 70
LweI GCATC 3 cut(s) 98, 120, 155
MaeI CTAG 2 cut(s) 5, 65
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 1 cut(s) 92
MboII GAAGA 3 cut(s) 32, 169, 193
MmeI TCCRAC 1 cut(s) 263
MnlI CCTC 3 cut(s) 91, 216, 262
Mph1103I ATGCAT 1 cut(s) 113
MspI CCGG 1 cut(s) 77
MspR9I CCNGG 1 cut(s) 90
MvaI CCWGG 1 cut(s) 90
NlaIII CATG 2 cut(s) 22, 166
NmuCI GTSAC 1 cut(s) 92
NsiI ATGCAT 1 cut(s) 113
PfeI GAWTC 1 cut(s) 37
PkrI GCNGC 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 22
PspGI CCWGG 1 cut(s) 88
SatI GCNGC 1 cut(s) 59
ScrFI CCNGG 1 cut(s) 90
SetI ASST 4 cut(s) 70, 86, 102, 276
SfaNI GCATC 3 cut(s) 98, 120, 155
SspMI CTAG 2 cut(s) 5, 65
StyD4I CCNGG 1 cut(s) 88
TaiI ACGT 1 cut(s) 86
TfiI GAWTC 1 cut(s) 37
TscAI CASTG 1 cut(s) 263
TseFI GTSAC 1 cut(s) 92
TseI GCWGC 1 cut(s) 58
Tsp45I GTSAC 1 cut(s) 92
TspDTI ATGAA 2 cut(s) 7, 45
TspRI CASTG 1 cut(s) 263
XspI CTAG 2 cut(s) 5, 65
Zsp2I ATGCAT 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.