Prupe.4G142700_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
8185880 .. 8186543
664 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G142700.1

Sequence Viewer

Length: 438 bp
ATGTCTCCCGAATATGCAGTAGATGGAATTTTCTCGATGAAATCTGATGTGTTTAGCTTTGGAGTTATACTGCTGGAGATGTTGAGTAGGAAGAAGAATAGGGGATTTTCTCATCCAGATCACCACCTTAACCTTCTTGGACATGCATGGATACTATGGATTGAAGATAAAGCTTCGGAACTGACTGATAAGACATTACATGATTCGTGCACCATATCAGAAGTGTTAAGGTGTCTTCATGTGGCGCTGTTATGTGTGCAAAGAGTTCCTGAAGATAGACCAAGCATGTCATCTGTGGTTCTAATGTTGAGCAGTGATGTTACCTTGCCTCCACCGAATCAGCCTGGTTTTTACACTGAACGAAGTGTCTCTGGATCACCATTAAGGACACACCCGTGTTCAGCGAATAATTCCATTTCAATAATAGAGGCTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

146

Amino Acids

16.16

Weight (kDa)

6.13

Isoelectric Point (pI)

63.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 382
AcsI RAATTY 1 cut(s) 27
AcuI CTGAAG 1 cut(s) 291
AgsI TTSAA 2 cut(s) 164, 420
AjnI CCWGG 1 cut(s) 343
AleI CACNNNNGTG 1 cut(s) 394
AluBI AGCT 2 cut(s) 57, 173
AluI AGCT 2 cut(s) 57, 173
Alw21I GWGCWC 1 cut(s) 212
Alw26I GTCTC 2 cut(s) 9, 373
Alw44I GTGCAC 1 cut(s) 208
AlwI GGATC 1 cut(s) 382
ApaLI GTGCAC 1 cut(s) 208
ApoI RAATTY 1 cut(s) 27
AspLEI GCGC 1 cut(s) 247
AsuHPI GGTGA 2 cut(s) 113, 369
BaeGI GKGCMC 1 cut(s) 212
BbsI GAAGAC 1 cut(s) 227
Bbv12I GWGCWC 1 cut(s) 212
BccI CCATC 1 cut(s) 17
BciT130I CCWGG 1 cut(s) 345
BciVI GTATCC 1 cut(s) 144
BcoDI GTCTC 2 cut(s) 9, 373
BfoI RGCGCY 1 cut(s) 248
BfuI GTATCC 1 cut(s) 144
Bme1390I CCNGG 1 cut(s) 345
BmrFI CCNGG 1 cut(s) 345
BpiI GAAGAC 1 cut(s) 227
BpmI CTGGAG 1 cut(s) 95
BsaXI ACNNNNNCTCC 2 cut(s) 313, 343
BseBI CCWGG 1 cut(s) 345
BseGI GGATG 1 cut(s) 112
BseSI GKGCMC 1 cut(s) 212
BsiHKAI GWGCWC 1 cut(s) 212
BsmAI GTCTC 2 cut(s) 9, 373
Bsp1286I GDGCHC 1 cut(s) 212
Bsp143I GATC 2 cut(s) 118, 374
BspPI GGATC 1 cut(s) 382
BssMI GATC 2 cut(s) 118, 374
Bst2UI CCWGG 1 cut(s) 345
BstF5I GGATG 1 cut(s) 112
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 1 cut(s) 247
BstKTI GATC 2 cut(s) 121, 377
BstMAI GTCTC 2 cut(s) 9, 373
BstMBI GATC 2 cut(s) 118, 374
BstNI CCWGG 1 cut(s) 345
BstNSI RCATGY 2 cut(s) 146, 289
BstSCI CCNGG 1 cut(s) 343
BstSLI GKGCMC 1 cut(s) 212
BstV2I GAAGAC 1 cut(s) 227
BsuI GTATCC 1 cut(s) 144
BtsCI GGATG 1 cut(s) 112
BtsI GCAGTG 1 cut(s) 319
BtsIMutI CAGTG 2 cut(s) 319, 354
CfoI GCGC 1 cut(s) 247
CviAII CATG 5 cut(s) 143, 147, 200, 239, 286
CviJI RGCY 4 cut(s) 57, 173, 343, 431
CviKI_1 RGCY 4 cut(s) 57, 173, 343, 431
DpnI GATC 2 cut(s) 120, 376
DpnII GATC 2 cut(s) 118, 374
Eco57I CTGAAG 1 cut(s) 291
EcoRII CCWGG 1 cut(s) 343
EcoT22I ATGCAT 1 cut(s) 148
FaeI CATG 5 cut(s) 146, 150, 203, 242, 289
FatI CATG 5 cut(s) 142, 146, 199, 238, 285
FokI GGATG 1 cut(s) 99
GlaI GCGC 1 cut(s) 246
GsuI CTGGAG 1 cut(s) 95
HaeII RGCGCY 1 cut(s) 248
HhaI GCGC 1 cut(s) 247
Hin1II CATG 5 cut(s) 146, 150, 203, 242, 289
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HindIII AAGCTT 1 cut(s) 171
HinfI GANTC 2 cut(s) 203, 337
HphI GGTGA 2 cut(s) 113, 369
Hpy166II GTNNAC 1 cut(s) 210
Hpy188I TCNGA 3 cut(s) 46, 178, 220
Hpy188III TCNNGA 5 cut(s) 8, 34, 116, 269, 372
Hpy8I GTNNAC 1 cut(s) 210
HpyAV CCTTC 1 cut(s) 143
HpyCH4V TGCA 4 cut(s) 17, 146, 210, 259
Hsp92II CATG 5 cut(s) 146, 150, 203, 242, 289
HspAI GCGC 1 cut(s) 245
Kzo9I GATC 2 cut(s) 118, 374
LpnPI CCDG 6 cut(s) 59, 129, 282, 330, 357, 357
MaeIII GTNAC 1 cut(s) 319
MalI GATC 2 cut(s) 120, 376
MboI GATC 2 cut(s) 118, 374
MboII GAAGA 5 cut(s) 103, 106, 176, 227, 284
MhlI GDGCHC 1 cut(s) 212
MluCI AATT 2 cut(s) 27, 409
MnlI CCTC 2 cut(s) 339, 421
Mph1103I ATGCAT 1 cut(s) 148
MseI TTAA 3 cut(s) 129, 227, 383
MslI CAYNNNNRTG 1 cut(s) 394
MspR9I CCNGG 1 cut(s) 345
MvaI CCWGG 1 cut(s) 345
NdeII GATC 2 cut(s) 118, 374
NlaIII CATG 5 cut(s) 146, 150, 203, 242, 289
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 2 cut(s) 146, 289
OliI CACNNNNGTG 1 cut(s) 394
PfeI GAWTC 2 cut(s) 203, 337
Psp6I CCWGG 1 cut(s) 343
PspGI CCWGG 1 cut(s) 343
RseI CAYNNNNRTG 1 cut(s) 394
SaqAI TTAA 3 cut(s) 129, 227, 383
Sau3AI GATC 2 cut(s) 118, 374
ScrFI CCNGG 1 cut(s) 345
SduI GDGCHC 1 cut(s) 212
SetI ASST 6 cut(s) 59, 129, 135, 175, 233, 326
SmiMI CAYNNNNRTG 1 cut(s) 394
Sse9I AATT 2 cut(s) 27, 409
StyD4I CCNGG 1 cut(s) 343
TaqI TCGA 1 cut(s) 35
TasI AATT 2 cut(s) 27, 409
TfiI GAWTC 2 cut(s) 203, 337
Tru1I TTAA 3 cut(s) 129, 227, 383
Tru9I TTAA 3 cut(s) 129, 227, 383
TscAI CASTG 2 cut(s) 319, 361
TspDTI ATGAA 2 cut(s) 53, 227
TspRI CASTG 2 cut(s) 319, 361
VneI GTGCAC 1 cut(s) 208
XapI RAATTY 1 cut(s) 27
XceI RCATGY 2 cut(s) 146, 289
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.