Rmu_co8162180.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8162180.1
Physical Location & Seq
Forward (+)
1 .. 449
449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8162180.1_g000001.1.cds

Sequence Viewer

Length: 366 bp
ataagtggaaagaaaagtaaagggttctatcacttgaaccacgacctgaatcttattggaaatgcatggaggttatggaacggaggccggccattagaactgatagatgaagggtttggggagtcctgcaacttaacggaggtgttgcgatgcatccatgtcagtctcttgtgtgtacaacaacagcctgacgacaggccgaccatgtcatctgtagttcagatgttatgtagtgaaagtgccttgcctcagcctaaagaaccaggattcttttcagagaaagatttggttggaggaggctttccctttcttaacaacgaagcgtcttataatggattaaccatttccctactcgaggctcgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

121

Amino Acids

13.39

Weight (kDa)

5.27

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 330
AcoI YGGCCR 1 cut(s) 89
AfaI GTAC 1 cut(s) 177
AfiI CCNNNNNNNGG 1 cut(s) 355
AgsI TTSAA 1 cut(s) 37
AjnI CCWGG 1 cut(s) 262
Alw26I GTCTC 1 cut(s) 170
Ama87I CYCGRG 1 cut(s) 353
AoxI GGCC 3 cut(s) 85, 89, 197
AvaI CYCGRG 1 cut(s) 353
BbvCI CCTCAGC 1 cut(s) 249
BciT130I CCWGG 1 cut(s) 264
BcoDI GTCTC 1 cut(s) 170
BfmI CTRYAG 1 cut(s) 213
Bme1390I CCNGG 1 cut(s) 264
BmeT110I CYCGRG 1 cut(s) 353
BmrFI CCNGG 1 cut(s) 264
BmsI GCATC 2 cut(s) 140, 162
Bpu10I CCTNAGC 1 cut(s) 249
Bsc4I CCNNNNNNNGG 1 cut(s) 355
Bse118I RCCGGY 1 cut(s) 87
BseBI CCWGG 1 cut(s) 264
BseGI GGATG 1 cut(s) 153
BseLI CCNNNNNNNGG 1 cut(s) 355
BseMII CTCAG 1 cut(s) 263
BseRI GAGGAG 1 cut(s) 309
BshFI GGCC 3 cut(s) 87, 91, 199
BsiHKCI CYCGRG 1 cut(s) 353
BsiSI CCGG 1 cut(s) 88
BslI CCNNNNNNNGG 1 cut(s) 355
BsmAI GTCTC 1 cut(s) 170
BsnI GGCC 3 cut(s) 87, 91, 199
BsoBI CYCGRG 1 cut(s) 353
Bsp1407I TGTACA 1 cut(s) 175
BspANI GGCC 3 cut(s) 87, 91, 199
BspCNI CTCAG 1 cut(s) 262
BsrFI RCCGGY 1 cut(s) 87
BsrGI TGTACA 1 cut(s) 175
BssAI RCCGGY 1 cut(s) 87
Bst2UI CCWGG 1 cut(s) 264
BstAUI TGTACA 1 cut(s) 175
BstC8I GCNNGC 1 cut(s) 89
BstDEI CTNAG 1 cut(s) 249
BstENI CCTNNNNNAGG 1 cut(s) 353
BstF5I GGATG 1 cut(s) 153
BstMAI GTCTC 1 cut(s) 170
BstNI CCWGG 1 cut(s) 264
BstSCI CCNGG 1 cut(s) 262
BstSFI CTRYAG 1 cut(s) 213
BsuRI GGCC 3 cut(s) 87, 91, 199
BtgZI GCGATG 1 cut(s) 163
BtsCI GGATG 1 cut(s) 153
Cac8I GCNNGC 1 cut(s) 89
Cfr10I RCCGGY 1 cut(s) 87
CseI GACGC 1 cut(s) 312
Csp6I GTAC 1 cut(s) 176
CviAII CATG 3 cut(s) 66, 158, 205
CviJI RGCY 7 cut(s) 87, 91, 187, 199, 253, 300, 359
CviKI_1 RGCY 7 cut(s) 87, 91, 187, 199, 253, 300, 359
CviQI GTAC 1 cut(s) 176
DdeI CTNAG 1 cut(s) 249
EaeI YGGCCR 1 cut(s) 89
Eco88I CYCGRG 1 cut(s) 353
EcoNI CCTNNNNNAGG 1 cut(s) 353
EcoRII CCWGG 1 cut(s) 262
EcoT22I ATGCAT 2 cut(s) 67, 155
FaeI CATG 3 cut(s) 69, 161, 208
FaiI YATR 6 cut(s) 67, 76, 159, 206, 229, 330
FatI CATG 3 cut(s) 65, 157, 204
FokI GGATG 1 cut(s) 140
FseI GGCCGGCC 1 cut(s) 91
HaeIII GGCC 3 cut(s) 87, 91, 199
HapII CCGG 1 cut(s) 88
HgaI GACGC 1 cut(s) 312
Hin1II CATG 3 cut(s) 69, 161, 208
HinfI GANTC 3 cut(s) 49, 122, 267
HpaII CCGG 1 cut(s) 88
Hpy166II GTNNAC 1 cut(s) 176
Hpy188I TCNGA 2 cut(s) 222, 277
Hpy8I GTNNAC 1 cut(s) 176
HpyAV CCTTC 1 cut(s) 104
HpyCH4V TGCA 3 cut(s) 65, 129, 153
HpyF3I CTNAG 1 cut(s) 249
Hsp92II CATG 3 cut(s) 69, 161, 208
KroI GCCGGC 1 cut(s) 87
KroNI GCCGGC 1 cut(s) 89
LpnPI CCDG 7 cut(s) 59, 101, 139, 181, 201, 249, 276
LweI GCATC 2 cut(s) 140, 162
MlyI GAGTC 1 cut(s) 131
MmeI TCCRAC 1 cut(s) 271
MnlI CCTC 7 cut(s) 63, 77, 133, 258, 287, 290, 349
Mph1103I ATGCAT 2 cut(s) 67, 155
MroNI GCCGGC 1 cut(s) 87
MseI TTAA 4 cut(s) 134, 312, 338, 364
MspI CCGG 1 cut(s) 88
MspR9I CCNGG 1 cut(s) 264
MvaI CCWGG 1 cut(s) 264
NaeI GCCGGC 1 cut(s) 89
NgoMIV GCCGGC 1 cut(s) 87
NlaIII CATG 3 cut(s) 69, 161, 208
NsiI ATGCAT 2 cut(s) 67, 155
PaeR7I CTCGAG 1 cut(s) 353
PdiI GCCGGC 1 cut(s) 89
PfeI GAWTC 2 cut(s) 49, 267
PflFI GACNNNGTC 1 cut(s) 205
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
PsiI TTATAA 1 cut(s) 330
Psp6I CCWGG 1 cut(s) 262
PspGI CCWGG 1 cut(s) 262
PspXI VCTCGAGB 1 cut(s) 353
PsyI GACNNNGTC 1 cut(s) 205
RigI GGCCGGCC 1 cut(s) 91
RsaI GTAC 1 cut(s) 177
RsaNI GTAC 1 cut(s) 176
SaqAI TTAA 4 cut(s) 134, 312, 338, 364
SchI GAGTC 1 cut(s) 131
ScrFI CCNGG 1 cut(s) 264
SetI ASST 3 cut(s) 48, 74, 144
SfaNI GCATC 2 cut(s) 140, 162
SfcI CTRYAG 1 cut(s) 213
Sfr274I CTCGAG 1 cut(s) 353
SlaI CTCGAG 1 cut(s) 353
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
StyD4I CCNGG 1 cut(s) 262
TaqI TCGA 1 cut(s) 354
TatI WGTACW 1 cut(s) 175
TfiI GAWTC 2 cut(s) 49, 267
Tru1I TTAA 4 cut(s) 134, 312, 338, 364
Tru9I TTAA 4 cut(s) 134, 312, 338, 364
TspDTI ATGAA 1 cut(s) 123
TspGWI ACGGA 2 cut(s) 96, 152
Tth111I GACNNNGTC 1 cut(s) 205
XagI CCTNNNNNAGG 1 cut(s) 353
XhoI CTCGAG 1 cut(s) 353
Zsp2I ATGCAT 2 cut(s) 67, 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.