MD11G1231000.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000201
Physical Location & Seq
Reverse (-)
33593917 .. 33597372
3456 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1231000.v1.1.491

Sequence Viewer

Length: 2136 bp
ATGTTAATGTATCTACCTAACTCACAGAGCTTCTGCAACTTGAAAGCAATGGAAAATCATATTGTTTTTTCTTTCATTTTTTTTGGAATTCAGTTGTCCCTCTCCTTCTTCAAACCCTCACTTGCAGCTGATGCCATTACTCAAAAATCCCAACCCCTCATAGATGGCAGCACCTTGATTTCCAAAGACGGCAGCTTTCAAATGGGGTTTTTCGGTCCCCCAGGTTTTGGCTTTTCCCAGAAGCGCTTCTTGGGAATTTGGCACAACAGTTCGGTCCCATCAGTCCCAAATGTTATTTGGGTTGCAAACCAGCACAACCCCATCAATGGTTCATCTGGTTTTTTGATGATAAACACCTCAGACAGTGTTGTCCTTCTAAGTCAGGACAACACTGTTGCCTGGTCGATATCTTTATCCAAATATCCCCGGAATCCGGTCTTGCAGCTCTTGGATTCCGGCAATCTTGTCCTGAGAGAAGCAAAAGATGGAAACCCAAGAAACTACATGTGGCAAAGTTTTGACTATCAGCCTGATAGGAGTCTATTGACATCAACTTCGAGAGATTACTGCGACGATAACCGACGTTGCGGCTCCAATGGACTATGTTTTATCACTAAATCCCCAGTTTGCAGTTGCTTCCAAGGATACGAGCCGAGAGCACCAGATAAATGGAGCTATGGAGACTTCCAAGAAGGTTGCGTGCGGGCTCAACCCTTGAGCTGCCTAAAGAAACATGGGTTTGTGAAATATAGTGGGGTGAAATTGCCAGATAACACAAATTCCCTGACCAACCAAAGTTCGGGTCGCGCGGAATGCGGGGACAATTGCTTGAGCAATTGTTCTTGTGTGGCTTACGCAGTTAGCTCCAATGCCGCAGGAGGAGGAAGTGGCTGCACCACCTGGTTTGGTGACCTTCTCAACAGCAAAGAGCTTTTGGATGGCGGGGAGGATCTGTACATCCGAACTGCTTCGGAATCAAAATCGAATTCGCCGAAGACAAAGTTAGCAGTGATACTTGTGTCAGTTGCTGTCGTTGTTGCCGGGACACTCTTGGCTGTTTATTTCATTCACAGAAAGAGAAGAAAGTTCAAAGATAGAATGAGGAACAACAACGAAGGACAAGACAACCTGGAGCTACCGCTATTCAGTCTCTCCACACTAGTCACCGCCACTGATAACTTTGCATTCAACAGGAAGCTTGGAGAAGGTGGGTTTGGATCTGTGTACAAGGGTAGACTAGAAGATGGGCAAGAAATTGCTGTGAAGAGGCTCTCAGAAGTATCGGGGCAAGGATCGAATGAGTTCAAAAATGAGGTATCACTGATCGCTAAACTTCAGCACCGGAATCTTGTAAGGCTTCTCGGTTGTTGCGTTGAAGGAGAAGAGAGATTGTTGATTTATGAATACTTGCCTAACAAAAGCTTGGACCTCTACATTTTCGATGAGACTCAAAGTAAACTGTTGGAATGGCCGCAACGCTTTCGCATTATCTGTGGGATCGGCAGGGGTCTTCTCTATCTGCACCAAGATTCCAGATTGAGGATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTTGATATGGAGATGAACCCAAAAATCTCAGACTTCGGCTTGGCTAGAATGTTCGGAGGAGACCAGACTGAAGGCGTGACAAGAAAAGTGGTCGGAACCTATGGTTACATGGCACCAGAATACGCAATTGATGGTCAATTCTCTGTAAAATCAGACGTGTTCAGCTTTGGAATTTTGTTGATGGAGCTAGTCAGCGGGAAGAGAAGTAGAGGGTTTTATGATCCGGACGACAACCTCAACCTCATTGGATATGCATGGAGGCTGTGGAAAACCGGGAGATATCTAGAGTTGATCGACGAATCCTTAAGGGACTCACTCACTCTGTCGGAAGTCGTGCGTTGCATACATGTTGGTCTTTTATGCGTGCAGCAGCTTCCTGAGGACAGACCAACCATGTCATCTGTGATTCTGATGTTGGGCAACGACTCCCGCTTGCCGGAACCCAAACAACCAGGCTTCTTTGGTGGAAAAAATTTACCTGAAGCATATTCATCTTCGAGTAAGACCGAATCATCTGCTACCTACGACTCAACCGTAACAGTCCCGGAGGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

712

Amino Acids

79.07

Weight (kDa)

7.76

Isoelectric Point (pI)

42.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 98 - 181 1.1e-20 D-mannose binding lectin
S_locus_glycop PF00954 178 - 219 4.9e-07 S-locus glycoprotein domain
PAN_2 PF08276 241 - 307 1.7e-16 PAN-like domain
Pkinase PF00069 395 - 595 6.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 396 - 662 1.4e-47 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 667 - 711 8.8e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 368
AccB1I GGYRCC 1 cut(s) 1690
AccB7I CCANNNNNTGG 1 cut(s) 227
AccI GTMKAC 1 cut(s) 1234
AccII CGCG 2 cut(s) 807, 809
AccIII TCCGGA 1 cut(s) 1801
AclWI GGATC 5 cut(s) 957, 1225, 1300, 1505, 1793
AcoI YGGCCR 1 cut(s) 1469
AcsI RAATTY 6 cut(s) 87, 255, 778, 985, 1749, 2050
AcuI CTGAAG 3 cut(s) 1319, 1668, 2079
AfaI GTAC 2 cut(s) 956, 1226
AfeI AGCGCT 1 cut(s) 245
AfiI CCNNNNNNNGG 6 cut(s) 227, 326, 433, 799, 1539, 2014
AflII CTTAAG 1 cut(s) 1882
AflIII ACRYGT 3 cut(s) 504, 1734, 1924
AgsI TTSAA 7 cut(s) 43, 112, 200, 1090, 1189, 1306, 1376
AhlI ACTAGT 1 cut(s) 1159
AjiI CACGTC 1 cut(s) 1735
AjnI CCWGG 5 cut(s) 220, 398, 899, 1128, 2029
AjuI GAANNNNNNNTTGG 4 cut(s) 233, 265, 1197, 1229
Alw21I GWGCWC 1 cut(s) 661
Alw26I GTCTC 4 cut(s) 675, 1154, 1439, 1632
AlwI GGATC 5 cut(s) 957, 1225, 1300, 1505, 1793
AlwNI CAGNNNCTG 1 cut(s) 1028
Aor13HI TCCGGA 1 cut(s) 1801
Aor51HI AGCGCT 1 cut(s) 245
AoxI GGCC 1 cut(s) 1469
ApeKI GCWGC 8 cut(s) 125, 168, 192, 442, 720, 891, 1945, 1948
ApoI RAATTY 6 cut(s) 87, 255, 778, 985, 1749, 2050
ArsI GACNNNNNNTTYG 4 cut(s) 538, 570, 787, 819
Asp700I GAANNNNTTC 3 cut(s) 245, 967, 1301
AspLEI GCGC 2 cut(s) 246, 809
AspS9I GGNCC 3 cut(s) 215, 274, 1426
AsuC2I CCSGG 4 cut(s) 427, 1042, 1852, 2123
AsuHPI GGTGA 3 cut(s) 769, 920, 1156
AvaII GGWCC 3 cut(s) 215, 274, 1426
AxyI CCTNAGG 1 cut(s) 1956
BaeI ACNNNNGTAYC 2 cut(s) 1004, 1037
BanI GGYRCC 1 cut(s) 1690
BanII GRGCYC 1 cut(s) 709
BbsI GAAGAC 2 cut(s) 1001, 1502
Bbv12I GWGCWC 1 cut(s) 661
BbvI GCAGC 8 cut(s) 137, 180, 204, 454, 707, 878, 1957, 1960
BccI CCATC 8 cut(s) 158, 286, 329, 479, 932, 1238, 1703, 1753
BceAI ACGGC 1 cut(s) 205
BcgI CGANNNNNNTGC 4 cut(s) 1463, 1497, 2075, 2109
BciT130I CCWGG 5 cut(s) 222, 400, 901, 1130, 2031
BciVI GTATCC 1 cut(s) 638
BcnI CCSGG 4 cut(s) 427, 1042, 1852, 2123
BcoDI GTCTC 4 cut(s) 675, 1154, 1439, 1632
BcuI ACTAGT 1 cut(s) 1159
BfaI CTAG 5 cut(s) 1160, 1238, 1623, 1766, 1862
BfoI RGCGCY 1 cut(s) 247
BfrI CTTAAG 1 cut(s) 1882
BfuI GTATCC 1 cut(s) 638
BglII AGATCT 1 cut(s) 1555
Bme1390I CCNGG 9 cut(s) 222, 400, 427, 901, 1042, 1130, 1852, 2031, 2123
Bme18I GGWCC 3 cut(s) 215, 274, 1426
BmgBI CACGTC 1 cut(s) 1735
BmgT120I GGNCC 3 cut(s) 215, 274, 1426
BmiI GGNNCC 6 cut(s) 217, 276, 592, 1675, 1692, 2019
BmrFI CCNGG 9 cut(s) 222, 400, 427, 901, 1042, 1130, 1852, 2031, 2123
BmrI ACTGGG 1 cut(s) 617
BmsI GCATC 1 cut(s) 121
BmuI ACTGGG 1 cut(s) 617
BpiI GAAGAC 2 cut(s) 1001, 1502
BpmI CTGGAG 1 cut(s) 1151
BpuEI CTTGAG 2 cut(s) 736, 850
BpuMI CCSGG 4 cut(s) 427, 1042, 1852, 2123
BsaI GGTCTC 1 cut(s) 1632
BsaJI CCNNGG 3 cut(s) 220, 425, 640
BsaWI WCCGGW 3 cut(s) 433, 1341, 1801
BsaXI ACNNNNNCTCC 2 cut(s) 938, 968
Bsc4I CCNNNNNNNGG 6 cut(s) 227, 326, 433, 799, 1539, 2014
Bse1I ACTGG 1 cut(s) 623
Bse21I CCTNAGG 1 cut(s) 1956
Bse3DI GCAATG 1 cut(s) 54
BseAI TCCGGA 1 cut(s) 1801
BseBI CCWGG 5 cut(s) 222, 400, 901, 1130, 2031
BseDI CCNNGG 3 cut(s) 220, 425, 640
BseGI GGATG 2 cut(s) 943, 957
BseLI CCNNNNNNNGG 6 cut(s) 227, 326, 433, 799, 1539, 2014
BseMI GCAATG 1 cut(s) 54
BseMII CTCAG 5 cut(s) 372, 461, 1287, 1620, 1947
BseNI ACTGG 1 cut(s) 623
BseRI GAGGAG 2 cut(s) 894, 1650
BseXI GCAGC 8 cut(s) 137, 180, 204, 454, 707, 878, 1957, 1960
BsgI GTGCAG 3 cut(s) 877, 1505, 1964
Bsh1236I CGCG 2 cut(s) 807, 809
BshFI GGCC 1 cut(s) 1471
BshNI GGYRCC 1 cut(s) 1690
BsiHKAI GWGCWC 1 cut(s) 661
BsiSI CCGG 9 cut(s) 427, 434, 456, 1041, 1342, 1802, 1851, 2015, 2123
BslFI GGGAC 8 cut(s) 82, 201, 260, 269, 833, 1057, 1901, 2105
BslI CCNNNNNNNGG 6 cut(s) 227, 326, 433, 799, 1539, 2014
BsmAI GTCTC 4 cut(s) 675, 1154, 1439, 1632
BsmFI GGGAC 8 cut(s) 82, 201, 260, 269, 833, 1057, 1901, 2105
BsmI GAATGC 2 cut(s) 818, 1184
BsnI GGCC 1 cut(s) 1471
Bso31I GGTCTC 1 cut(s) 1632
Bsp1286I GDGCHC 2 cut(s) 661, 709
Bsp13I TCCGGA 1 cut(s) 1801
Bsp1407I TGTACA 2 cut(s) 954, 1224
Bsp143I GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
BspANI GGCC 1 cut(s) 1471
BspCNI CTCAG 5 cut(s) 371, 462, 1286, 1619, 1948
BspEI TCCGGA 1 cut(s) 1801
BspFNI CGCG 2 cut(s) 807, 809
BspLI GGNNCC 6 cut(s) 217, 276, 592, 1675, 1692, 2019
BspPI GGATC 5 cut(s) 957, 1225, 1300, 1505, 1793
BspT107I GGYRCC 1 cut(s) 1690
BspTI CTTAAG 1 cut(s) 1882
BspTNI GGTCTC 1 cut(s) 1632
BsrDI GCAATG 1 cut(s) 54
BsrGI TGTACA 2 cut(s) 954, 1224
BsrI ACTGG 1 cut(s) 623
BssECI CCNNGG 3 cut(s) 220, 425, 640
BssMI GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
BssT1I CCWWGG 1 cut(s) 640
Bst2UI CCWGG 5 cut(s) 222, 400, 901, 1130, 2031
Bst4CI ACNGT 6 cut(s) 269, 365, 394, 1461, 2113, 2119
Bst6I CTCTTC 3 cut(s) 1259, 1377, 1772
BstAFI CTTAAG 1 cut(s) 1882
BstAPI GCANNNNNTGC 1 cut(s) 131
BstAUI TGTACA 2 cut(s) 954, 1224
BstC8I GCNNGC 4 cut(s) 701, 705, 1943, 2012
BstDEI CTNAG 6 cut(s) 358, 377, 470, 1273, 1606, 1956
BstEII GGTNACC 1 cut(s) 908
BstF5I GGATG 2 cut(s) 943, 957
BstFNI CGCG 2 cut(s) 807, 809
BstH2I RGCGCY 1 cut(s) 247
BstHHI GCGC 2 cut(s) 246, 809
BstKTI GATC 8 cut(s) 952, 1220, 1295, 1326, 1500, 1558, 1801, 1872
BstMAI GTCTC 4 cut(s) 675, 1154, 1439, 1632
BstMBI GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
BstMWI GCNNNNNNNGC 2 cut(s) 131, 813
BstNI CCWGG 5 cut(s) 222, 400, 901, 1130, 2031
BstNSI RCATGY 2 cut(s) 508, 1928
BstPI GGTNACC 1 cut(s) 908
BstSCI CCNGG 9 cut(s) 220, 398, 425, 899, 1040, 1128, 1850, 2029, 2121
BstUI CGCG 2 cut(s) 807, 809
BstV1I GCAGC 8 cut(s) 137, 180, 204, 454, 707, 878, 1957, 1960
BstV2I GAAGAC 2 cut(s) 1001, 1502
BstX2I RGATCY 3 cut(s) 949, 1217, 1555
BstXI CCANNNNNNTGG 1 cut(s) 669
BstYI RGATCY 3 cut(s) 949, 1217, 1555
Bsu36I CCTNAGG 1 cut(s) 1956
BsuI GTATCC 1 cut(s) 638
BsuRI GGCC 1 cut(s) 1471
BtrI CACGTC 1 cut(s) 1735
BtsCI GGATG 2 cut(s) 943, 957
BtsI GCAGTG 1 cut(s) 1014
BtsIMutI CAGTG 5 cut(s) 370, 390, 1014, 1170, 1319
Cac8I GCNNGC 4 cut(s) 701, 705, 1943, 2012
CaiI CAGNNNCTG 1 cut(s) 1028
CfoI GCGC 2 cut(s) 246, 809
Cfr13I GGNCC 3 cut(s) 215, 274, 1426
CsiI ACCWGGT 1 cut(s) 899
Csp6I GTAC 2 cut(s) 955, 1225
CspCI CAANNNNNGTGG 4 cut(s) 886, 921, 1647, 1682
CviAII CATG 6 cut(s) 505, 734, 1687, 1833, 1925, 1972
CviQI GTAC 2 cut(s) 955, 1225
DdeI CTNAG 6 cut(s) 358, 377, 470, 1273, 1606, 1956
DpnI GATC 8 cut(s) 951, 1219, 1294, 1325, 1499, 1557, 1800, 1871
DpnII GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
DrdI GACNNNNNNGTC 1 cut(s) 368
DseDI GACNNNNNNGTC 1 cut(s) 368
EaeI YGGCCR 1 cut(s) 1469
Eam1104I CTCTTC 3 cut(s) 1259, 1377, 1772
EarI CTCTTC 3 cut(s) 1259, 1377, 1772
Eco130I CCWWGG 1 cut(s) 640
Eco24I GRGCYC 1 cut(s) 709
Eco31I GGTCTC 1 cut(s) 1632
Eco32I GATATC 2 cut(s) 408, 1859
Eco47I GGWCC 3 cut(s) 215, 274, 1426
Eco47III AGCGCT 1 cut(s) 245
Eco57I CTGAAG 3 cut(s) 1319, 1668, 2079
Eco81I CCTNAGG 1 cut(s) 1956
Eco91I GGTNACC 1 cut(s) 908
EcoO65I GGTNACC 1 cut(s) 908
EcoRI GAATTC 2 cut(s) 87, 985
EcoRII CCWGG 5 cut(s) 220, 398, 899, 1128, 2029
EcoRV GATATC 2 cut(s) 408, 1859
EcoT14I CCWWGG 1 cut(s) 640
EcoT22I ATGCAT 1 cut(s) 1834
EcoT38I GRGCYC 1 cut(s) 709
ErhI CCWWGG 1 cut(s) 640
FaeI CATG 6 cut(s) 508, 737, 1690, 1836, 1928, 1975
FalI AAGNNNNNCTT 2 cut(s) 233, 265
FaqI GGGAC 8 cut(s) 82, 201, 260, 269, 833, 1057, 1901, 2105
FatI CATG 6 cut(s) 504, 733, 1686, 1832, 1924, 1971
FauI CCCGC 5 cut(s) 696, 809, 935, 1766, 2015
FblI GTMKAC 1 cut(s) 1234
FokI GGATG 2 cut(s) 944, 950
FriOI GRGCYC 1 cut(s) 709
FspBI CTAG 5 cut(s) 1160, 1238, 1623, 1766, 1862
GlaI GCGC 2 cut(s) 245, 808
GsuI CTGGAG 1 cut(s) 1151
HaeII RGCGCY 1 cut(s) 247
HaeIII GGCC 1 cut(s) 1471
HapII CCGG 9 cut(s) 427, 434, 456, 1041, 1342, 1802, 1851, 2015, 2123
HhaI GCGC 2 cut(s) 246, 809
Hin1II CATG 6 cut(s) 508, 737, 1690, 1836, 1928, 1975
Hin6I GCGC 2 cut(s) 244, 807
HinP1I GCGC 2 cut(s) 244, 807
HindIII AAGCTT 2 cut(s) 1196, 1420
HpaII CCGG 9 cut(s) 427, 434, 456, 1041, 1342, 1802, 1851, 2015, 2123
HphI GGTGA 3 cut(s) 769, 920, 1156
Hpy166II GTNNAC 3 cut(s) 1225, 1235, 1457
Hpy188III TCNNGA 7 cut(s) 383, 469, 558, 1533, 1802, 1862, 1955
Hpy8I GTNNAC 3 cut(s) 1225, 1235, 1457
Hpy99I CGWCG 3 cut(s) 575, 585, 1877
HpyAV CCTTC 8 cut(s) 115, 383, 686, 923, 1109, 1199, 1370, 1643
HpyCH4III ACNGT 6 cut(s) 269, 365, 394, 1461, 2113, 2119
HpyCH4IV ACGT 2 cut(s) 583, 1734
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 813
HpyF3I CTNAG 6 cut(s) 358, 377, 470, 1273, 1606, 1956
HpySE526I ACGT 2 cut(s) 583, 1734
Hsp92II CATG 6 cut(s) 508, 737, 1690, 1836, 1928, 1975
HspAI GCGC 2 cut(s) 244, 807
Kpn2I TCCGGA 1 cut(s) 1801
Kzo9I GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
LmnI GCTCC 5 cut(s) 596, 672, 869, 1132, 1762
Lsp1109I GCAGC 8 cut(s) 137, 180, 204, 454, 707, 878, 1957, 1960
LweI GCATC 1 cut(s) 121
MabI ACCWGGT 1 cut(s) 899
MaeI CTAG 5 cut(s) 1160, 1238, 1623, 1766, 1862
MaeII ACGT 2 cut(s) 583, 1734
MaeIII GTNAC 5 cut(s) 908, 1162, 1654, 1682, 2113
MalI GATC 8 cut(s) 951, 1219, 1294, 1325, 1499, 1557, 1800, 1871
MboI GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
MboII GAAGA 9 cut(s) 100, 1006, 1092, 1253, 1276, 1394, 1502, 1789, 2064
MfeI CAATTG 3 cut(s) 823, 835, 1704
MflI RGATCY 3 cut(s) 949, 1217, 1555
MhlI GDGCHC 2 cut(s) 661, 709
MlyI GAGTC 5 cut(s) 547, 1441, 1883, 1997, 2099
MmeI TCCRAC 3 cut(s) 1443, 1651, 1884
Mph1103I ATGCAT 1 cut(s) 1834
MroI TCCGGA 1 cut(s) 1801
MroXI GAANNNNTTC 3 cut(s) 245, 967, 1301
MseI TTAA 3 cut(s) 5, 1560, 1883
MspA1I CMGCKG 2 cut(s) 128, 1773
MspCI CTTAAG 1 cut(s) 1882
MspI CCGG 9 cut(s) 427, 434, 456, 1041, 1342, 1802, 1851, 2015, 2123
MspR9I CCNGG 9 cut(s) 222, 400, 427, 901, 1042, 1130, 1852, 2031, 2123
MunI CAATTG 3 cut(s) 823, 835, 1704
Mva1269I GAATGC 2 cut(s) 818, 1184
MvaI CCWGG 5 cut(s) 222, 400, 901, 1130, 2031
MvnI CGCG 2 cut(s) 807, 809
MwoI GCNNNNNNNGC 2 cut(s) 131, 813
NciI CCSGG 4 cut(s) 427, 1042, 1852, 2123
NdeII GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
NlaIII CATG 6 cut(s) 508, 737, 1690, 1836, 1928, 1975
NlaIV GGNNCC 6 cut(s) 217, 276, 592, 1675, 1692, 2019
NmeAIII GCCGAG 1 cut(s) 678
NmuCI GTSAC 3 cut(s) 908, 1162, 1654
NsiI ATGCAT 1 cut(s) 1834
NspI RCATGY 2 cut(s) 508, 1928
PciI ACATGT 2 cut(s) 504, 1924
PcsI WCGNNNNNNNCGW 3 cut(s) 989, 1368, 2109
PctI GAATGC 2 cut(s) 818, 1184
PdmI GAANNNNTTC 3 cut(s) 245, 967, 1301
PfeI GAWTC 8 cut(s) 430, 452, 974, 1345, 1529, 1877, 1984, 2087
PflMI CCANNNNNTGG 1 cut(s) 227
PfoI TCCNGGA 1 cut(s) 2121
PleI GAGTC 5 cut(s) 546, 1441, 1883, 1997, 2099
PpsI GAGTC 5 cut(s) 546, 1441, 1883, 1997, 2099
PscI ACATGT 2 cut(s) 504, 1924
Psp6I CCWGG 5 cut(s) 220, 398, 899, 1128, 2029
PspEI GGTNACC 1 cut(s) 908
PspGI CCWGG 5 cut(s) 220, 398, 899, 1128, 2029
PspN4I GGNNCC 6 cut(s) 217, 276, 592, 1675, 1692, 2019
PspPI GGNCC 3 cut(s) 215, 274, 1426
PstNI CAGNNNCTG 1 cut(s) 1028
PsuI RGATCY 3 cut(s) 949, 1217, 1555
PvuII CAGCTG 1 cut(s) 128
RsaI GTAC 2 cut(s) 956, 1226
RsaNI GTAC 2 cut(s) 955, 1225
SaqAI TTAA 3 cut(s) 5, 1560, 1883
Sau3AI GATC 8 cut(s) 949, 1217, 1292, 1323, 1497, 1555, 1798, 1869
Sau96I GGNCC 3 cut(s) 215, 274, 1426
SchI GAGTC 5 cut(s) 547, 1441, 1883, 1997, 2099
ScrFI CCNGG 9 cut(s) 222, 400, 427, 901, 1042, 1130, 1852, 2031, 2123
SduI GDGCHC 2 cut(s) 661, 709
SexAI ACCWGGT 1 cut(s) 899
SfaNI GCATC 1 cut(s) 121
SinI GGWCC 3 cut(s) 215, 274, 1426
SmlI CTYRAG 3 cut(s) 715, 829, 1882
SmoI CTYRAG 3 cut(s) 715, 829, 1882
SpeI ACTAGT 1 cut(s) 1159
SspMI CTAG 5 cut(s) 1160, 1238, 1623, 1766, 1862
StyD4I CCNGG 9 cut(s) 220, 398, 425, 899, 1040, 1128, 1850, 2029, 2121
StyI CCWWGG 1 cut(s) 640
TaaI ACNGT 6 cut(s) 269, 365, 394, 1461, 2113, 2119
TaiI ACGT 2 cut(s) 586, 1737
TaqI TCGA 8 cut(s) 404, 557, 983, 1295, 1440, 1872, 2075, 2131
TaqII GACCGA 3 cut(s) 203, 262, 2099
TatI WGTACW 2 cut(s) 954, 1224
TauI GCSGC 3 cut(s) 591, 875, 1474
TfiI GAWTC 8 cut(s) 430, 452, 974, 1345, 1529, 1877, 1984, 2087
Tru1I TTAA 3 cut(s) 5, 1560, 1883
Tru9I TTAA 3 cut(s) 5, 1560, 1883
TscAI CASTG 5 cut(s) 370, 397, 1014, 1177, 1326
TseFI GTSAC 3 cut(s) 908, 1162, 1654
TseI GCWGC 8 cut(s) 125, 168, 192, 442, 720, 891, 1945, 1948
Tsp45I GTSAC 3 cut(s) 908, 1162, 1654
TspDTI ATGAA 7 cut(s) 64, 321, 1054, 1416, 1538, 1607, 2058
TspRI CASTG 5 cut(s) 370, 397, 1014, 1177, 1326
Van91I CCANNNNNTGG 1 cut(s) 227
Vha464I CTTAAG 1 cut(s) 1882
VpaK11BI GGWCC 3 cut(s) 215, 274, 1426
XapI RAATTY 6 cut(s) 87, 255, 778, 985, 1749, 2050
XbaI TCTAGA 1 cut(s) 1861
XceI RCATGY 2 cut(s) 508, 1928
XcmI CCANNNNNNNNNTGG 1 cut(s) 294
XmiI GTMKAC 1 cut(s) 1234
XmnI GAANNNNTTC 3 cut(s) 245, 967, 1301
XspI CTAG 5 cut(s) 1160, 1238, 1623, 1766, 1862
Zsp2I ATGCAT 1 cut(s) 1834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.