Rmu_sc0004371.1_g000019

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004371.1
Physical Location & Seq
Reverse (-)
79685 .. 80596
912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004371.1_g000019.1.cds

Sequence Viewer

Length: 324 bp
atggcttggatttacggccagcagaggaatgtctcggctcagttgctgcgtctctttttccatgactgcttcattgaggcatggaagctgttcatagaaggcaggtccatcgaacttcttgatccatcggtagaggactccagcactctacatgaagttgtgcgatatattgattcatcattgagcggtgaaggtgcattgcctcaacctcagaagcctgatttttataatggaagaaatctgacagatcttgaagattctacagatgaggctacaaaatgttcagctaatgaactcactgttacactattgggggctcgatga

Protein Analysis

107

Amino Acids

12.08

Weight (kDa)

4.54

Isoelectric Point (pI)

49.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 228
Acc36I ACCTGC 1 cut(s) 93
AccBSI CCGCTC 1 cut(s) 186
AciI CCGC 1 cut(s) 186
AclWI GGATC 1 cut(s) 116
AcoI YGGCCR 1 cut(s) 16
AgsI TTSAA 1 cut(s) 254
AluBI AGCT 2 cut(s) 88, 287
AluI AGCT 2 cut(s) 88, 287
Alw26I GTCTC 2 cut(s) 37, 56
AlwI GGATC 1 cut(s) 116
AlwNI CAGNNNCTG 1 cut(s) 46
AoxI GGCC 1 cut(s) 16
ApeKI GCWGC 1 cut(s) 46
Asp700I GAANNNNTTC 1 cut(s) 89
AspS9I GGNCC 1 cut(s) 105
AsuHPI GGTGA 1 cut(s) 200
AvaII GGWCC 1 cut(s) 105
BanII GRGCYC 1 cut(s) 319
BbvI GCAGC 1 cut(s) 33
BccI CCATC 2 cut(s) 116, 133
BceAI ACGGC 1 cut(s) 31
BcgI CGANNNNNNTGC 2 cut(s) 91, 125
BcoDI GTCTC 2 cut(s) 37, 56
BfmI CTRYAG 1 cut(s) 261
BfuAI ACCTGC 1 cut(s) 93
BglII AGATCT 1 cut(s) 247
BisI GCNGC 1 cut(s) 47
BlsI GCNGC 1 cut(s) 48
Bme18I GGWCC 1 cut(s) 105
BmgT120I GGNCC 1 cut(s) 105
BpmI CTGGAG 1 cut(s) 124
Bse3DI GCAATG 1 cut(s) 197
BseMI GCAATG 1 cut(s) 197
BseMII CTCAG 2 cut(s) 53, 224
BseXI GCAGC 1 cut(s) 33
BshFI GGCC 1 cut(s) 18
BsmAI GTCTC 2 cut(s) 37, 56
BsmBI CGTCTC 1 cut(s) 56
BsnI GGCC 1 cut(s) 18
Bsp1286I GDGCHC 1 cut(s) 319
Bsp143I GATC 2 cut(s) 121, 247
BspACI CCGC 1 cut(s) 186
BspANI GGCC 1 cut(s) 18
BspCNI CTCAG 2 cut(s) 52, 223
BspMI ACCTGC 1 cut(s) 93
BspPI GGATC 1 cut(s) 116
BsrBI CCGCTC 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 197
BssMI GATC 2 cut(s) 121, 247
Bst4CI ACNGT 1 cut(s) 301
BstC8I GCNNGC 1 cut(s) 20
BstDEI CTNAG 2 cut(s) 39, 210
BstKTI GATC 2 cut(s) 124, 250
BstMAI GTCTC 2 cut(s) 37, 56
BstMBI GATC 2 cut(s) 121, 247
BstSFI CTRYAG 1 cut(s) 261
BstV1I GCAGC 1 cut(s) 33
BstX2I RGATCY 1 cut(s) 247
BstYI RGATCY 1 cut(s) 247
BsuRI GGCC 1 cut(s) 18
BtsIMutI CAGTG 1 cut(s) 297
BveI ACCTGC 1 cut(s) 93
Cac8I GCNNGC 1 cut(s) 20
CaiI CAGNNNCTG 1 cut(s) 46
Cfr13I GGNCC 1 cut(s) 105
CseI GACGC 1 cut(s) 38
CviAII CATG 3 cut(s) 62, 81, 152
CviJI RGCY 8 cut(s) 5, 18, 38, 88, 217, 272, 287, 317
CviKI_1 RGCY 8 cut(s) 5, 18, 38, 88, 217, 272, 287, 317
DdeI CTNAG 2 cut(s) 39, 210
DpnI GATC 2 cut(s) 123, 249
DpnII GATC 2 cut(s) 121, 247
EaeI YGGCCR 1 cut(s) 16
Eco24I GRGCYC 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 105
EcoT38I GRGCYC 1 cut(s) 319
Esp3I CGTCTC 1 cut(s) 56
FaeI CATG 3 cut(s) 65, 84, 155
FaiI YATR 6 cut(s) 63, 82, 95, 153, 168, 228
FatI CATG 3 cut(s) 61, 80, 151
Fnu4HI GCNGC 1 cut(s) 47
FriOI GRGCYC 1 cut(s) 319
Fsp4HI GCNGC 1 cut(s) 47
GluI GCNGC 1 cut(s) 47
GsuI CTGGAG 1 cut(s) 124
HaeIII GGCC 1 cut(s) 18
HgaI GACGC 1 cut(s) 38
Hin1II CATG 3 cut(s) 65, 84, 155
HinfI GANTC 3 cut(s) 137, 173, 257
HphI GGTGA 1 cut(s) 200
Hpy188I TCNGA 2 cut(s) 213, 243
Hpy188III TCNNGA 2 cut(s) 119, 251
HpyAV CCTTC 2 cut(s) 92, 185
HpyCH4III ACNGT 1 cut(s) 301
HpyCH4V TGCA 1 cut(s) 197
HpyF3I CTNAG 2 cut(s) 39, 210
Hsp92II CATG 3 cut(s) 65, 84, 155
Kzo9I GATC 2 cut(s) 121, 247
LpnPI CCDG 4 cut(s) 32, 88, 154, 231
Lsp1109I GCAGC 1 cut(s) 33
MaeIII GTNAC 1 cut(s) 301
MalI GATC 2 cut(s) 123, 249
MbiI CCGCTC 1 cut(s) 186
MboI GATC 2 cut(s) 121, 247
MboII GAAGA 2 cut(s) 246, 266
MflI RGATCY 1 cut(s) 247
MhlI GDGCHC 1 cut(s) 319
MlyI GAGTC 1 cut(s) 131
MnlI CCTC 6 cut(s) 18, 70, 127, 213, 219, 262
MroXI GAANNNNTTC 1 cut(s) 89
NdeII GATC 2 cut(s) 121, 247
NlaIII CATG 3 cut(s) 65, 84, 155
NmeAIII GCCGAG 1 cut(s) 14
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 2 cut(s) 173, 257
PkrI GCNGC 1 cut(s) 48
PleI GAGTC 1 cut(s) 131
PpsI GAGTC 1 cut(s) 131
PsiI TTATAA 1 cut(s) 228
PspPI GGNCC 1 cut(s) 105
PstNI CAGNNNCTG 1 cut(s) 46
PsuI RGATCY 1 cut(s) 247
SatI GCNGC 1 cut(s) 47
Sau3AI GATC 2 cut(s) 121, 247
Sau96I GGNCC 1 cut(s) 105
SchI GAGTC 1 cut(s) 131
SduI GDGCHC 1 cut(s) 319
SetI ASST 5 cut(s) 90, 107, 196, 211, 289
SfcI CTRYAG 1 cut(s) 261
SinI GGWCC 1 cut(s) 105
SsiI CCGC 1 cut(s) 186
TaaI ACNGT 1 cut(s) 301
TaqI TCGA 2 cut(s) 111, 319
TfiI GAWTC 2 cut(s) 173, 257
TscAI CASTG 1 cut(s) 304
TseI GCWGC 1 cut(s) 46
TspDTI ATGAA 5 cut(s) 61, 82, 165, 168, 306
TspRI CASTG 1 cut(s) 304
VpaK11BI GGWCC 1 cut(s) 105
XmnI GAANNNNTTC 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.