Prupe.4G195600_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
11938981 .. 11940859
1879 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G195600.1

Sequence Viewer

Length: 1041 bp
ATGAACAATGAAAGGGAACCAGAGGAGGATCTGGAGCTTCCGCTCTTTGACCTGCCCACAGTAGCTAGTGCCACAGATAACTTTTCAAGCAATAACAAGCTCGGAGAAGGTGGATTTGGACCCGTTTACAGGGGGACACTACTAGATGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCTGGCCAAGGATTGAATGAGTTCAAGAATGAAGTTATACTGATTGCAAAGCTTCAGCATCGAAATCTTGTAAAGCTTCTTGGATTCTGCGTTCAAGGAGAGGAGAAAATGCTGATTTATGAATACATGCCCAACAGAAGCCTGGACTCCTTTATTTTTGATAGTGTGAGAGGAGAACTACTGTTAGATTGGCCTAAACGTTTCCATATTATTTGCGGAGTTGCTCGGGGTCTCCTCTATCTCCATCAGGATTCCAGGCTAAGGATTATTCATCGAGATCTCAAAGCAAGTAATGTTTTACTTGATAATGAAATGAATCCAAAAATTTCAGACTTTGGCTTGGCTAGAACATTAATTGGAGGAGATCAGTCTGGTGGAAATACAAACAGAGTAGTTGGAACATACGGTTATATGGCACCTGAATATGCTATTGATGGGCTGTTTTCTGTCAAATCGGATGTATTTAGCTTTGGTATTTTGGTGCTGGAGGTCATAAGTGGACGGAAAAATAAGGGATTCTACCATCCAAACCACAGTCATAACCTTATTGGACATGCATGGAGAATGTGGATTCAAGGAAGGCCTTTAGAACTGATTGATACGTGTTTAGAAAGCTCATGTACTCTATCGGAAGTGTTACGTTGCGTCCATATTAGTCTCTTATGCGTGCAACATCATCCCGAGGATAGACCAAGCATGGCATCTGTGGTTATCATGCTGGGAAGTGAGATTGCATTGGCTCAGCCCAAACAACCTGGTTTCTTTATAGAAAAGGAATCGCATGAAGTAGGCTCTTCTTCAGGTAATCAAAAATCTTCAACAAACGAAATATCGATTACACTTTTGGAGGGCCGTTAA

Protein Analysis

347

Amino Acids

38.63

Weight (kDa)

5.96

Isoelectric Point (pI)

48.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 598
AccBSI CCGCTC 1 cut(s) 43
AciI CCGC 2 cut(s) 41, 399
AclI AACGTT 1 cut(s) 382
AclWI GGATC 1 cut(s) 36
AcoI YGGCCR 1 cut(s) 187
AcsI RAATTY 1 cut(s) 507
AcuI CTGAAG 2 cut(s) 221, 966
AfaI GTAC 1 cut(s) 805
AfiI CCNNNNNNNGG 2 cut(s) 129, 444
AflIII ACRYGT 1 cut(s) 785
AgsI TTSAA 7 cut(s) 87, 177, 199, 208, 278, 758, 1002
AjnI CCWGG 3 cut(s) 324, 437, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 99, 131
AloI GAACNNNNNNTCC 2 cut(s) 258, 290
AluBI AGCT 7 cut(s) 37, 65, 100, 235, 259, 651, 798
AluI AGCT 7 cut(s) 37, 65, 100, 235, 259, 651, 798
Alw26I GTCTC 2 cut(s) 419, 845
AlwI GGATC 1 cut(s) 36
Ama87I CYCGRG 2 cut(s) 408, 863
AoxI GGCC 4 cut(s) 187, 374, 764, 1033
ApoI RAATTY 1 cut(s) 507
AseI ATTAAT 1 cut(s) 536
Asp700I GAANNNNTTC 1 cut(s) 203
AspS9I GGNCC 2 cut(s) 119, 1033
AvaI CYCGRG 2 cut(s) 408, 863
AvaII GGWCC 1 cut(s) 119
BalI TGGCCA 1 cut(s) 189
BanI GGYRCC 1 cut(s) 598
BccI CCATC 4 cut(s) 140, 435, 611, 714
BceAI ACGGC 1 cut(s) 1020
BciT130I CCWGG 3 cut(s) 326, 439, 939
BcoDI GTCTC 2 cut(s) 419, 845
BfaI CTAG 3 cut(s) 66, 143, 528
BfuAI ACCTGC 1 cut(s) 60
BglII AGATCT 1 cut(s) 460
BlpI GCTNAGC 1 cut(s) 924
Bme1390I CCNGG 3 cut(s) 326, 439, 939
Bme18I GGWCC 1 cut(s) 119
BmeT110I CYCGRG 2 cut(s) 408, 863
BmgT120I GGNCC 2 cut(s) 119, 1033
BmiI GGNNCC 3 cut(s) 18, 121, 600
BmrFI CCNGG 3 cut(s) 326, 439, 939
BmsI GCATC 2 cut(s) 250, 893
BpmI CTGGAG 2 cut(s) 53, 689
Bpu10I CCTNAGC 1 cut(s) 443
Bpu1102I GCTNAGC 1 cut(s) 924
Bsa29I ATCGAT 1 cut(s) 1016
BsaAI YACGTR 1 cut(s) 786
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 2 cut(s) 190, 864
Bsc4I CCNNNNNNNGG 2 cut(s) 129, 444
BseBI CCWGG 3 cut(s) 326, 439, 939
BseCI ATCGAT 1 cut(s) 1016
BseDI CCNNGG 2 cut(s) 190, 864
BseGI GGATG 3 cut(s) 646, 706, 859
BseLI CCNNNNNNNGG 2 cut(s) 129, 444
BseMII CTCAG 1 cut(s) 938
BseRI GAGGAG 5 cut(s) 38, 299, 369, 407, 558
BseYI CCCAGC 1 cut(s) 901
BshFI GGCC 4 cut(s) 189, 376, 766, 1035
BshNI GGYRCC 1 cut(s) 598
BshVI ATCGAT 1 cut(s) 1016
BsiHKCI CYCGRG 2 cut(s) 408, 863
BslFI GGGAC 1 cut(s) 148
BslI CCNNNNNNNGG 2 cut(s) 129, 444
BsmAI GTCTC 2 cut(s) 419, 845
BsmFI GGGAC 1 cut(s) 148
BsnI GGCC 4 cut(s) 189, 376, 766, 1035
Bso31I GGTCTC 1 cut(s) 419
BsoBI CYCGRG 2 cut(s) 408, 863
Bsp143I GATC 3 cut(s) 28, 460, 547
Bsp1720I GCTNAGC 1 cut(s) 924
BspACI CCGC 2 cut(s) 41, 399
BspANI GGCC 4 cut(s) 189, 376, 766, 1035
BspCNI CTCAG 1 cut(s) 937
BspDI ATCGAT 1 cut(s) 1016
BspLI GGNNCC 3 cut(s) 18, 121, 600
BspMI ACCTGC 1 cut(s) 60
BspPI GGATC 1 cut(s) 36
BspQI GCTCTTC 1 cut(s) 982
BspT107I GGYRCC 1 cut(s) 598
BspTNI GGTCTC 1 cut(s) 419
BsrBI CCGCTC 1 cut(s) 43
BssECI CCNNGG 2 cut(s) 190, 864
BssMI GATC 3 cut(s) 28, 460, 547
BssT1I CCWWGG 1 cut(s) 190
Bst2UI CCWGG 3 cut(s) 326, 439, 939
Bst4CI ACNGT 4 cut(s) 61, 366, 590, 719
Bst6I CTCTTC 2 cut(s) 161, 982
BstBAI YACGTR 1 cut(s) 786
BstC8I GCNNGC 1 cut(s) 851
BstDEI CTNAG 2 cut(s) 443, 924
BstF5I GGATG 3 cut(s) 646, 706, 859
BstKTI GATC 3 cut(s) 31, 463, 550
BstMAI GTCTC 2 cut(s) 419, 845
BstMBI GATC 3 cut(s) 28, 460, 547
BstNI CCWGG 3 cut(s) 326, 439, 939
BstNSI RCATGY 2 cut(s) 313, 740
BstSCI CCNGG 3 cut(s) 324, 437, 937
BstX2I RGATCY 2 cut(s) 28, 460
BstYI RGATCY 2 cut(s) 28, 460
Bsu15I ATCGAT 1 cut(s) 1016
BsuRI GGCC 4 cut(s) 189, 376, 766, 1035
BsuTUI ATCGAT 1 cut(s) 1016
BtsCI GGATG 3 cut(s) 646, 706, 859
BveI ACCTGC 1 cut(s) 60
Cac8I GCNNGC 1 cut(s) 851
Cfr13I GGNCC 2 cut(s) 119, 1033
ClaI ATCGAT 1 cut(s) 1016
CseI GACGC 1 cut(s) 817
CsiI ACCWGGT 1 cut(s) 937
Csp6I GTAC 1 cut(s) 804
CviAII CATG 7 cut(s) 310, 737, 741, 801, 880, 898, 965
CviQI GTAC 1 cut(s) 804
DdeI CTNAG 2 cut(s) 443, 924
DpnI GATC 3 cut(s) 30, 462, 549
DpnII GATC 3 cut(s) 28, 460, 547
EaeI YGGCCR 1 cut(s) 187
Eam1104I CTCTTC 2 cut(s) 161, 982
EarI CTCTTC 2 cut(s) 161, 982
Eco130I CCWWGG 1 cut(s) 190
Eco147I AGGCCT 1 cut(s) 766
Eco31I GGTCTC 1 cut(s) 419
Eco47I GGWCC 1 cut(s) 119
Eco57I CTGAAG 2 cut(s) 221, 966
Eco88I CYCGRG 2 cut(s) 408, 863
EcoRII CCWGG 3 cut(s) 324, 437, 937
EcoT14I CCWWGG 1 cut(s) 190
EcoT22I ATGCAT 1 cut(s) 742
ErhI CCWWGG 1 cut(s) 190
FaeI CATG 7 cut(s) 313, 740, 744, 804, 883, 901, 968
FaqI GGGAC 1 cut(s) 148
FatI CATG 7 cut(s) 309, 736, 740, 800, 879, 897, 964
FokI GGATG 3 cut(s) 653, 693, 846
FspBI CTAG 3 cut(s) 66, 143, 528
GsaI CCCAGC 1 cut(s) 905
GsuI CTGGAG 2 cut(s) 53, 689
HaeIII GGCC 4 cut(s) 189, 376, 766, 1035
HgaI GACGC 1 cut(s) 817
Hin1II CATG 7 cut(s) 313, 740, 744, 804, 883, 901, 968
HindIII AAGCTT 2 cut(s) 233, 257
HinfI GANTC 7 cut(s) 267, 329, 434, 499, 699, 754, 959
Hpy166II GTNNAC 2 cut(s) 127, 683
Hpy188I TCNGA 4 cut(s) 104, 514, 640, 814
Hpy188III TCNNGA 6 cut(s) 32, 177, 208, 431, 458, 863
Hpy8I GTNNAC 2 cut(s) 127, 683
HpyAV CCTTC 2 cut(s) 101, 756
HpyCH4III ACNGT 4 cut(s) 61, 366, 590, 719
HpyCH4IV ACGT 3 cut(s) 382, 785, 823
HpyCH4V TGCA 4 cut(s) 230, 740, 853, 917
HpyF3I CTNAG 2 cut(s) 443, 924
HpySE526I ACGT 3 cut(s) 382, 785, 823
Hsp92II CATG 7 cut(s) 313, 740, 744, 804, 883, 901, 968
Kzo9I GATC 3 cut(s) 28, 460, 547
LguI GCTCTTC 1 cut(s) 982
LmnI GCTCC 1 cut(s) 34
LweI GCATC 2 cut(s) 250, 893
MabI ACCWGGT 1 cut(s) 937
MaeI CTAG 3 cut(s) 66, 143, 528
MaeII ACGT 3 cut(s) 382, 785, 823
MaeIII GTNAC 1 cut(s) 819
MalI GATC 3 cut(s) 30, 462, 549
MbiI CCGCTC 1 cut(s) 43
MboI GATC 3 cut(s) 28, 460, 547
MboII GAAGA 4 cut(s) 178, 969, 972, 990
MflI RGATCY 2 cut(s) 28, 460
MlsI TGGCCA 1 cut(s) 189
MluCI AATT 3 cut(s) 156, 507, 537
MluNI TGGCCA 1 cut(s) 189
MlyI GAGTC 1 cut(s) 323
MmeI TCCRAC 1 cut(s) 559
Mox20I TGGCCA 1 cut(s) 189
Mph1103I ATGCAT 1 cut(s) 742
MroXI GAANNNNTTC 1 cut(s) 203
MscI TGGCCA 1 cut(s) 189
MseI TTAA 2 cut(s) 536, 1039
Msp20I TGGCCA 1 cut(s) 189
MspR9I CCNGG 3 cut(s) 326, 439, 939
MvaI CCWGG 3 cut(s) 326, 439, 939
NdeII GATC 3 cut(s) 28, 460, 547
NlaIII CATG 7 cut(s) 313, 740, 744, 804, 883, 901, 968
NlaIV GGNNCC 3 cut(s) 18, 121, 600
NsiI ATGCAT 1 cut(s) 742
NspI RCATGY 2 cut(s) 313, 740
PceI AGGCCT 1 cut(s) 766
PciSI GCTCTTC 1 cut(s) 982
PdmI GAANNNNTTC 1 cut(s) 203
PfeI GAWTC 6 cut(s) 267, 434, 499, 699, 754, 959
PleI GAGTC 1 cut(s) 323
PpsI GAGTC 1 cut(s) 323
Ppu21I YACGTR 1 cut(s) 786
PshBI ATTAAT 1 cut(s) 536
Psp1406I AACGTT 1 cut(s) 382
Psp6I CCWGG 3 cut(s) 324, 437, 937
PspFI CCCAGC 1 cut(s) 901
PspGI CCWGG 3 cut(s) 324, 437, 937
PspN4I GGNNCC 3 cut(s) 18, 121, 600
PspPI GGNCC 2 cut(s) 119, 1033
PsuI RGATCY 2 cut(s) 28, 460
RsaI GTAC 1 cut(s) 805
RsaNI GTAC 1 cut(s) 804
SapI GCTCTTC 1 cut(s) 982
SaqAI TTAA 2 cut(s) 536, 1039
Sau3AI GATC 3 cut(s) 28, 460, 547
Sau96I GGNCC 2 cut(s) 119, 1033
SchI GAGTC 1 cut(s) 323
ScrFI CCNGG 3 cut(s) 326, 439, 939
SexAI ACCWGGT 1 cut(s) 937
SfaNI GCATC 2 cut(s) 250, 893
SinI GGWCC 1 cut(s) 119
Sse9I AATT 3 cut(s) 156, 507, 537
SseBI AGGCCT 1 cut(s) 766
SsiI CCGC 2 cut(s) 41, 399
SspMI CTAG 3 cut(s) 66, 143, 528
StuI AGGCCT 1 cut(s) 766
StyD4I CCNGG 3 cut(s) 324, 437, 937
StyI CCWWGG 1 cut(s) 190
TaaI ACNGT 4 cut(s) 61, 366, 590, 719
TaiI ACGT 3 cut(s) 385, 788, 826
TaqI TCGA 3 cut(s) 244, 457, 1016
TasI AATT 3 cut(s) 156, 507, 537
TatI WGTACW 1 cut(s) 803
TfiI GAWTC 6 cut(s) 267, 434, 499, 699, 754, 959
Tru1I TTAA 2 cut(s) 536, 1039
Tru9I TTAA 2 cut(s) 536, 1039
TspDTI ATGAA 8 cut(s) 17, 24, 228, 318, 443, 507, 512, 981
TspGWI ACGGA 1 cut(s) 700
VpaK11BI GGWCC 1 cut(s) 119
VspI ATTAAT 1 cut(s) 536
XapI RAATTY 1 cut(s) 507
XceI RCATGY 2 cut(s) 313, 740
XcmI CCANNNNNNNNNTGG 1 cut(s) 322
XmnI GAANNNNTTC 1 cut(s) 203
XspI CTAG 3 cut(s) 66, 143, 528
Zsp2I ATGCAT 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.