RchiOBHm_Chr5g0036851

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000201
Physical Location & Seq
Reverse (-)
31098123 .. 31101015
2893 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31564

Sequence Viewer

Length: 1425 bp
ATGTGCCAAAGTAAGGATGATGGGTTTGTGAAATATGCCGGGGTCAAAGTGCCGGCGAGCATAGACTCTAGGGTGAACCAGAGCACGAGTCTCGAGGAATGCAAGGAGAGTTGCTTTAACAACTGTTCTTGTATGGCTTATGCAAGCTCTGATGTCAATGGCTGCACCATCTGGTTTGGTGATCTTTTCAACATTAGAAAGCTTCCACATGGAGGGAAGGATCTGTATGTTCGAGTGCCTACTTCCGAATTGAGCACGAAGCATCGATCTAAGTTGAAGATAATTATAGCGACAGTTGCATCTGGTGTTTGCATTGTTTTTGGGCTGCTCTTAGCCTTCTATTGCATTAGCAGAAAGAGGAGGAAACAGAGAGAGAAAATGGACAGAACGAACGATGGACAGAATGAAGACCTAGAGCTACCACTATATAGTCTGTCGACAATTATAGATGCCACCGATAGCTTTTCATTCAACAACAAGCTCGGGGAAGGTGGTTTTGGACCTGTATACAAGGGTAGACTAACAGATGGTCAAGAGATTGCCGTGAAGAGGCTCTCACAAACGTCTGGACAAGGTGCCTCAGAGTTCAAAAATGAAGTGATACTTATAGCGAAACTTCAGCATCGAAATCTTGTAAAGCTCCTTGGTTGTTGCATTGAAGGGGAAGAGAAATTGCTGATCTATGAATATATGCCCAACAGAAGCTTGGACTGCTACATTTTCGATCAAACACATGGTAGGCAGTTGGATTGGTCTCAGCGCTTCCACATTATTGAAGGTATAGCAAGGGGTCTTCTCTACTTGCATCAGGATTCCAGATTGAGGATTATTCATAGAGATCTTAAAGCAAGCAATGTGTTACTTGATGATGAGATGAAACCAAAAATCTCAGACTTTGGCATGGCTAGGCTTTTTGGAGGAGATGAGACTGAAGGAGTCACAAAAAGAGTAGTTGGAACCTACGGCTACATGGCACCAGAATATGCCATTGATGGTCAATTCTCTGTAAAATCCGACGTTTTTAGCTTTGGCATTTTATTGCTGGAGACATTGACCGGAAAGAGGAGTAGAGGGTTTCATGATCAGAAACACAACCTCAATCTAGTTGGACATGTGTGGAGAATGTGGAAAGAAGGAAGGTCTTTTGAGGCGATTGACGAATGCTTAAGGGAATCATGCACTCTATCAGAAGCAATGCATTGCATACATGTTGGTCTTCTATGTGTCCAAGAGCTTCCTGAAGATAGGCCGACCATGTCAGCGGTGGTTCTGATGCTAGGTGGTGAGAGTGCCTTGCCTCAACCCAAAAGGCCAGGTTTATATGTAGGAAAATATTCATCATCTGAAGTAGATTCATCTTCAAGTAAGAACGAAACATTTTCGAGTACTAATGAATGTTCAATAACTGTGGCGGAGGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

474

Amino Acids

53.08

Weight (kDa)

6.86

Isoelectric Point (pI)

56.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAN_2 PF08276 2 - 65 9.3e-18 PAN-like domain
PK_Tyr_Ser-Thr PF07714 156 - 424 9.8e-50 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 156 - 422 2.8e-45 Protein kinase domain
DUF3403 PF11883 429 - 474 1.2e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 575, 973
AccI GTMKAC 3 cut(s) 437, 507, 517
AciI CCGC 2 cut(s) 1262, 1412
AclWI GGATC 1 cut(s) 228
AcuI CTGAAG 4 cut(s) 602, 951, 1260, 1365
AfaI GTAC 1 cut(s) 1387
AfeI AGCGCT 1 cut(s) 761
AfiI CCNNNNNNNGG 5 cut(s) 13, 212, 549, 822, 1062
AflII CTTAAG 1 cut(s) 1165
AflIII ACRYGT 2 cut(s) 1111, 1207
AgsI TTSAA 8 cut(s) 190, 277, 472, 589, 659, 776, 1362, 1401
AjnI CCWGG 1 cut(s) 1312
AjuI GAANNNNNNNTTGG 2 cut(s) 480, 512
AluBI AGCT 9 cut(s) 147, 202, 418, 462, 481, 640, 705, 1026, 1234
AluI AGCT 9 cut(s) 147, 202, 418, 462, 481, 640, 705, 1026, 1234
Alw21I GWGCWC 2 cut(s) 86, 257
Alw26I GTCTC 4 cut(s) 95, 759, 920, 1040
AlwI GGATC 1 cut(s) 228
Ama87I CYCGRG 2 cut(s) 92, 482
Aor51HI AGCGCT 1 cut(s) 761
AoxI GGCC 2 cut(s) 1247, 1310
ApeKI GCWGC 2 cut(s) 162, 325
Asp700I GAANNNNTTC 1 cut(s) 1333
AspLEI GCGC 1 cut(s) 762
AspS9I GGNCC 1 cut(s) 500
AsuC2I CCSGG 1 cut(s) 40
AsuHPI GGTGA 3 cut(s) 85, 191, 1295
AvaI CYCGRG 2 cut(s) 92, 482
AvaII GGWCC 1 cut(s) 500
BanI GGYRCC 2 cut(s) 575, 973
BauI CACGAG 1 cut(s) 85
BbsI GAAGAC 3 cut(s) 414, 785, 1208
Bbv12I GWGCWC 2 cut(s) 86, 257
BbvI GCAGC 2 cut(s) 149, 312
BccI CCATC 5 cut(s) 14, 176, 389, 521, 986
BceAI ACGGC 2 cut(s) 527, 979
BcgI CGANNNNNNTGC 2 cut(s) 73, 107
BciT130I CCWGG 1 cut(s) 1314
BclI TGATCA 1 cut(s) 1081
BcnI CCSGG 1 cut(s) 40
BcoDI GTCTC 4 cut(s) 95, 759, 920, 1040
BfaI CTAG 5 cut(s) 69, 413, 906, 1103, 1277
BfoI RGCGCY 1 cut(s) 763
BfrI CTTAAG 1 cut(s) 1165
BglII AGATCT 1 cut(s) 838
BisI GCNGC 2 cut(s) 163, 326
BlsI GCNGC 2 cut(s) 164, 327
BmcAI AGTACT 1 cut(s) 1387
Bme1390I CCNGG 2 cut(s) 40, 1314
Bme18I GGWCC 1 cut(s) 500
BmeT110I CYCGRG 2 cut(s) 92, 482
BmgT120I GGNCC 1 cut(s) 500
BmiI GGNNCC 3 cut(s) 577, 958, 975
BmrFI CCNGG 2 cut(s) 40, 1314
BmsI GCATC 6 cut(s) 271, 308, 439, 631, 814, 1263
BpiI GAAGAC 3 cut(s) 414, 785, 1208
BpmI CTGGAG 1 cut(s) 1064
BpuMI CCSGG 1 cut(s) 40
Bsa29I ATCGAT 1 cut(s) 265
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 2 cut(s) 39, 643
BsaWI WCCGGW 1 cut(s) 1055
Bsc4I CCNNNNNNNGG 5 cut(s) 13, 212, 549, 822, 1062
Bse118I RCCGGY 1 cut(s) 52
Bse3DI GCAATG 3 cut(s) 859, 1198, 1200
BseBI CCWGG 1 cut(s) 1314
BseCI ATCGAT 1 cut(s) 265
BseDI CCNNGG 2 cut(s) 39, 643
BseGI GGATG 1 cut(s) 22
BseLI CCNNNNNNNGG 5 cut(s) 13, 212, 549, 822, 1062
BseMI GCAATG 3 cut(s) 859, 1198, 1200
BseMII CTCAG 3 cut(s) 594, 770, 903
BseRI GAGGAG 3 cut(s) 373, 933, 1078
BseXI GCAGC 2 cut(s) 149, 312
BsgI GTGCAG 1 cut(s) 148
BshFI GGCC 2 cut(s) 1249, 1312
BshNI GGYRCC 2 cut(s) 575, 973
BshVI ATCGAT 1 cut(s) 265
BsiHKAI GWGCWC 2 cut(s) 86, 257
BsiHKCI CYCGRG 2 cut(s) 92, 482
BsiSI CCGG 3 cut(s) 39, 53, 1056
BslI CCNNNNNNNGG 5 cut(s) 13, 212, 549, 822, 1062
BsmAI GTCTC 4 cut(s) 95, 759, 920, 1040
BsmI GAATGC 2 cut(s) 104, 1166
BsnI GGCC 2 cut(s) 1249, 1312
Bso31I GGTCTC 1 cut(s) 759
BsoBI CYCGRG 2 cut(s) 92, 482
Bsp1286I GDGCHC 2 cut(s) 86, 257
Bsp143I GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
BspACI CCGC 2 cut(s) 1262, 1412
BspANI GGCC 2 cut(s) 1249, 1312
BspCNI CTCAG 3 cut(s) 593, 769, 902
BspDI ATCGAT 1 cut(s) 265
BspHI TCATGA 1 cut(s) 1078
BspLI GGNNCC 3 cut(s) 577, 958, 975
BspPI GGATC 1 cut(s) 228
BspT107I GGYRCC 2 cut(s) 575, 973
BspTI CTTAAG 1 cut(s) 1165
BspTNI GGTCTC 1 cut(s) 759
BsrDI GCAATG 3 cut(s) 859, 1198, 1200
BsrFI RCCGGY 1 cut(s) 52
BssAI RCCGGY 1 cut(s) 52
BssECI CCNNGG 2 cut(s) 39, 643
BssMI GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
BssNAI GTATAC 1 cut(s) 508
BssSI CACGAG 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 643
Bst1107I GTATAC 1 cut(s) 508
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 1 cut(s) 1314
Bst4CI ACNGT 3 cut(s) 125, 295, 1408
Bst6I CTCTTC 2 cut(s) 542, 660
BstAFI CTTAAG 1 cut(s) 1165
BstC8I GCNNGC 4 cut(s) 54, 58, 145, 850
BstDEI CTNAG 5 cut(s) 270, 331, 580, 756, 889
BstF5I GGATG 1 cut(s) 22
BstH2I RGCGCY 1 cut(s) 763
BstHHI GCGC 1 cut(s) 762
BstKTI GATC 7 cut(s) 184, 223, 269, 681, 727, 841, 1084
BstMAI GTCTC 4 cut(s) 95, 759, 920, 1040
BstMBI GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
BstMWI GCNNNNNNNGC 2 cut(s) 296, 711
BstNI CCWGG 1 cut(s) 1314
BstNSI RCATGY 2 cut(s) 1115, 1211
BstSCI CCNGG 2 cut(s) 38, 1312
BstV1I GCAGC 2 cut(s) 149, 312
BstV2I GAAGAC 3 cut(s) 414, 785, 1208
BstX2I RGATCY 2 cut(s) 220, 838
BstYI RGATCY 2 cut(s) 220, 838
BstZ17I GTATAC 1 cut(s) 508
Bsu15I ATCGAT 1 cut(s) 265
BsuRI GGCC 2 cut(s) 1249, 1312
BsuTUI ATCGAT 1 cut(s) 265
BtsCI GGATG 1 cut(s) 22
Cac8I GCNNGC 4 cut(s) 54, 58, 145, 850
CciI TCATGA 1 cut(s) 1078
CfoI GCGC 1 cut(s) 762
Cfr10I RCCGGY 1 cut(s) 52
Cfr13I GGNCC 1 cut(s) 500
ClaI ATCGAT 1 cut(s) 265
Csp6I GTAC 1 cut(s) 1386
CspCI CAANNNNNGTGG 2 cut(s) 1389, 1424
CviAII CATG 9 cut(s) 209, 734, 901, 970, 1079, 1112, 1176, 1208, 1255
CviQI GTAC 1 cut(s) 1386
DdeI CTNAG 5 cut(s) 270, 331, 580, 756, 889
DpnI GATC 7 cut(s) 183, 222, 268, 680, 726, 840, 1083
DpnII GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
Eam1104I CTCTTC 2 cut(s) 542, 660
EarI CTCTTC 2 cut(s) 542, 660
Eco130I CCWWGG 1 cut(s) 643
Eco31I GGTCTC 1 cut(s) 759
Eco47I GGWCC 1 cut(s) 500
Eco47III AGCGCT 1 cut(s) 761
Eco57I CTGAAG 4 cut(s) 602, 951, 1260, 1365
Eco88I CYCGRG 2 cut(s) 92, 482
EcoRII CCWGG 1 cut(s) 1312
EcoT14I CCWWGG 1 cut(s) 643
EcoT22I ATGCAT 1 cut(s) 1200
ErhI CCWWGG 1 cut(s) 643
FaeI CATG 9 cut(s) 212, 737, 904, 973, 1082, 1115, 1179, 1211, 1258
FalI AAGNNNNNCTT 2 cut(s) 588, 620
FatI CATG 9 cut(s) 208, 733, 900, 969, 1078, 1111, 1175, 1207, 1254
FbaI TGATCA 1 cut(s) 1081
FblI GTMKAC 3 cut(s) 437, 507, 517
Fnu4HI GCNGC 2 cut(s) 163, 326
FokI GGATG 1 cut(s) 29
Fsp4HI GCNGC 2 cut(s) 163, 326
FspBI CTAG 5 cut(s) 69, 413, 906, 1103, 1277
GlaI GCGC 1 cut(s) 761
GluI GCNGC 2 cut(s) 163, 326
GsuI CTGGAG 1 cut(s) 1064
HaeII RGCGCY 1 cut(s) 763
HaeIII GGCC 2 cut(s) 1249, 1312
HapII CCGG 3 cut(s) 39, 53, 1056
HhaI GCGC 1 cut(s) 762
Hin1II CATG 9 cut(s) 212, 737, 904, 973, 1082, 1115, 1179, 1211, 1258
Hin6I GCGC 1 cut(s) 760
HinP1I GCGC 1 cut(s) 760
HincII GTYRAC 1 cut(s) 438
HindII GTYRAC 1 cut(s) 438
HindIII AAGCTT 2 cut(s) 200, 703
HinfI GANTC 6 cut(s) 65, 88, 812, 936, 1172, 1352
HpaII CCGG 3 cut(s) 39, 53, 1056
HphI GGTGA 3 cut(s) 85, 191, 1295
Hpy166II GTNNAC 4 cut(s) 76, 438, 508, 518
Hpy188I TCNGA 9 cut(s) 151, 247, 583, 892, 1015, 1086, 1189, 1272, 1345
Hpy188III TCNNGA 7 cut(s) 92, 533, 567, 809, 816, 1079, 1238
Hpy8I GTNNAC 4 cut(s) 76, 438, 508, 518
Hpy99I CGWCG 1 cut(s) 1019
HpyAV CCTTC 8 cut(s) 211, 346, 482, 653, 770, 926, 1127, 1131
HpyCH4III ACNGT 3 cut(s) 125, 295, 1408
HpyCH4IV ACGT 2 cut(s) 563, 1017
HpyF10VI GCNNNNNNNGC 2 cut(s) 296, 711
HpyF3I CTNAG 5 cut(s) 270, 331, 580, 756, 889
HpySE526I ACGT 2 cut(s) 563, 1017
Hsp92II CATG 9 cut(s) 212, 737, 904, 973, 1082, 1115, 1179, 1211, 1258
HspAI GCGC 1 cut(s) 760
KroI GCCGGC 1 cut(s) 52
KroNI GCCGGC 1 cut(s) 54
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
LmnI GCTCC 1 cut(s) 645
Lsp1109I GCAGC 2 cut(s) 149, 312
LweI GCATC 6 cut(s) 271, 308, 439, 631, 814, 1263
MaeI CTAG 5 cut(s) 69, 413, 906, 1103, 1277
MaeII ACGT 2 cut(s) 563, 1017
MaeIII GTNAC 2 cut(s) 858, 937
MalI GATC 7 cut(s) 183, 222, 268, 680, 726, 840, 1083
MboI GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
MboII GAAGA 8 cut(s) 289, 419, 559, 677, 785, 1208, 1253, 1350
MflI RGATCY 2 cut(s) 220, 838
MhlI GDGCHC 2 cut(s) 86, 257
MluCI AATT 5 cut(s) 248, 282, 441, 671, 998
MlyI GAGTC 3 cut(s) 59, 97, 945
MmeI TCCRAC 4 cut(s) 726, 934, 1038, 1087
Mph1103I ATGCAT 1 cut(s) 1200
MroNI GCCGGC 1 cut(s) 52
MroXI GAANNNNTTC 1 cut(s) 1333
MseI TTAA 3 cut(s) 117, 843, 1166
MspA1I CMGCKG 1 cut(s) 1262
MspCI CTTAAG 1 cut(s) 1165
MspI CCGG 3 cut(s) 39, 53, 1056
MspR9I CCNGG 2 cut(s) 40, 1314
Mva1269I GAATGC 2 cut(s) 104, 1166
MvaI CCWGG 1 cut(s) 1314
MwoI GCNNNNNNNGC 2 cut(s) 296, 711
NaeI GCCGGC 1 cut(s) 54
NciI CCSGG 1 cut(s) 40
NdeII GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
NgoMIV GCCGGC 1 cut(s) 52
NlaIII CATG 9 cut(s) 212, 737, 904, 973, 1082, 1115, 1179, 1211, 1258
NlaIV GGNNCC 3 cut(s) 577, 958, 975
NmuCI GTSAC 1 cut(s) 937
NsiI ATGCAT 1 cut(s) 1200
NspI RCATGY 2 cut(s) 1115, 1211
PaeR7I CTCGAG 1 cut(s) 92
PagI TCATGA 1 cut(s) 1078
PciI ACATGT 2 cut(s) 1111, 1207
PctI GAATGC 2 cut(s) 104, 1166
PdiI GCCGGC 1 cut(s) 54
PdmI GAANNNNTTC 1 cut(s) 1333
PfeI GAWTC 3 cut(s) 812, 1172, 1352
PflFI GACNNNGTC 1 cut(s) 1255
PkrI GCNGC 2 cut(s) 164, 327
PleI GAGTC 3 cut(s) 59, 96, 944
PpsI GAGTC 3 cut(s) 59, 96, 944
PscI ACATGT 2 cut(s) 1111, 1207
Psp6I CCWGG 1 cut(s) 1312
PspGI CCWGG 1 cut(s) 1312
PspN4I GGNNCC 3 cut(s) 577, 958, 975
PspPI GGNCC 1 cut(s) 500
PsuI RGATCY 2 cut(s) 220, 838
PsyI GACNNNGTC 1 cut(s) 1255
RsaI GTAC 1 cut(s) 1387
RsaNI GTAC 1 cut(s) 1386
SalI GTCGAC 1 cut(s) 436
SaqAI TTAA 3 cut(s) 117, 843, 1166
SatI GCNGC 2 cut(s) 163, 326
Sau3AI GATC 7 cut(s) 181, 220, 266, 678, 724, 838, 1081
Sau96I GGNCC 1 cut(s) 500
ScaI AGTACT 1 cut(s) 1387
SchI GAGTC 3 cut(s) 59, 97, 945
ScrFI CCNGG 2 cut(s) 40, 1314
SduI GDGCHC 2 cut(s) 86, 257
SfaNI GCATC 6 cut(s) 271, 308, 439, 631, 814, 1263
Sfr274I CTCGAG 1 cut(s) 92
SinI GGWCC 1 cut(s) 500
SlaI CTCGAG 1 cut(s) 92
SmlI CTYRAG 2 cut(s) 92, 1165
SmoI CTYRAG 2 cut(s) 92, 1165
Sse9I AATT 5 cut(s) 248, 282, 441, 671, 998
SsiI CCGC 2 cut(s) 1262, 1412
SspI AATATT 1 cut(s) 1334
SspMI CTAG 5 cut(s) 69, 413, 906, 1103, 1277
StyD4I CCNGG 2 cut(s) 38, 1312
StyI CCWWGG 1 cut(s) 643
TaaI ACNGT 3 cut(s) 125, 295, 1408
TaiI ACGT 2 cut(s) 566, 1020
TaqI TCGA 8 cut(s) 93, 232, 265, 437, 625, 723, 1382, 1420
TasI AATT 5 cut(s) 248, 282, 441, 671, 998
TatI WGTACW 1 cut(s) 1385
TfiI GAWTC 3 cut(s) 812, 1172, 1352
Tru1I TTAA 3 cut(s) 117, 843, 1166
Tru9I TTAA 3 cut(s) 117, 843, 1166
TseFI GTSAC 1 cut(s) 937
TseI GCWGC 2 cut(s) 162, 325
Tsp45I GTSAC 1 cut(s) 937
Tth111I GACNNNGTC 1 cut(s) 1255
Vha464I CTTAAG 1 cut(s) 1165
VpaK11BI GGWCC 1 cut(s) 500
XceI RCATGY 2 cut(s) 1115, 1211
XcmI CCANNNNNNNNNTGG 2 cut(s) 703, 1261
XhoI CTCGAG 1 cut(s) 92
XmiI GTMKAC 3 cut(s) 437, 507, 517
XmnI GAANNNNTTC 1 cut(s) 1333
XspI CTAG 5 cut(s) 69, 413, 906, 1103, 1277
ZrmI AGTACT 1 cut(s) 1387
Zsp2I ATGCAT 1 cut(s) 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.