RLG00000032829

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19513676 .. 19516586
2911 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032829

Sequence Viewer

Length: 429 bp
ATGAACAACACATTGAAAATCACAACCCAAAAAGGTGGTGATCCACCTATAGTGCTTCACTCGGCTCTGAAAAGTATTAGCATTGTAGCTACCCTTTTGGATTCTGGTAATTTTGTCCTACAAGAAGTGAACTCTAAGAAGGGAAAACTGGTGATGGAAGAAGAAATAGCTGTGAAGAAGCTTTCAAAATCTTCAGGGCAAGGCGTTGGTTACAGGCCTCCGGAGTATGTCAAGGAGGGAATTTTTTCTATAAAAACTGATGTCTACAGTTTTGGAGTATTACTGCTTGTGATCATAAGTGGGAGGAAAAGCAATAGCTTCTACAATGATGATCATGTGCTCAATATAGGAGGATATGCATGCATGGAGATTATGGTGAGAAGGTACCTGGCTAGAACTAAAGGATCCAACACTAGGCGATTCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

15.72

Weight (kDa)

9.68

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 64 - 104 9.5e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 384
AccB1I GGYRCC 1 cut(s) 384
AccI GTMKAC 1 cut(s) 264
AccIII TCCGGA 1 cut(s) 220
AclWI GGATC 3 cut(s) 35, 399, 412
AcsI RAATTY 1 cut(s) 240
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 1 cut(s) 386
AfiI CCNNNNNNNGG 1 cut(s) 414
AgsI TTSAA 2 cut(s) 16, 186
AjnI CCWGG 1 cut(s) 387
AluBI AGCT 4 cut(s) 89, 170, 181, 318
AluI AGCT 4 cut(s) 89, 170, 181, 318
Alw21I GWGCWC 1 cut(s) 342
AlwI GGATC 3 cut(s) 35, 399, 412
Aor13HI TCCGGA 1 cut(s) 220
AoxI GGCC 1 cut(s) 215
ApoI RAATTY 1 cut(s) 240
Asp700I GAANNNNTTC 1 cut(s) 244
Asp718I GGTACC 1 cut(s) 384
AsuHPI GGTGA 3 cut(s) 50, 163, 388
BamHI GGATCC 1 cut(s) 404
BanI GGYRCC 1 cut(s) 384
Bbv12I GWGCWC 1 cut(s) 342
BccI CCATC 1 cut(s) 148
BciT130I CCWGG 1 cut(s) 389
BclI TGATCA 2 cut(s) 291, 331
BfaI CTAG 2 cut(s) 393, 414
BfmI CTRYAG 2 cut(s) 48, 265
Bme1390I CCNGG 1 cut(s) 389
BmiI GGNNCC 2 cut(s) 386, 406
BmrFI CCNGG 1 cut(s) 389
BsaWI WCCGGW 1 cut(s) 220
Bsc4I CCNNNNNNNGG 1 cut(s) 414
Bse1I ACTGG 1 cut(s) 153
BseAI TCCGGA 1 cut(s) 220
BseBI CCWGG 1 cut(s) 389
BseLI CCNNNNNNNGG 1 cut(s) 414
BseNI ACTGG 1 cut(s) 153
BshFI GGCC 1 cut(s) 217
BshNI GGYRCC 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 342
BsiSI CCGG 1 cut(s) 221
BslI CCNNNNNNNGG 1 cut(s) 414
BsnI GGCC 1 cut(s) 217
Bsp1286I GDGCHC 1 cut(s) 342
Bsp13I TCCGGA 1 cut(s) 220
Bsp143I GATC 4 cut(s) 40, 291, 331, 404
BspANI GGCC 1 cut(s) 217
BspEI TCCGGA 1 cut(s) 220
BspLI GGNNCC 2 cut(s) 386, 406
BspPI GGATC 3 cut(s) 35, 399, 412
BspT107I GGYRCC 1 cut(s) 384
BsrI ACTGG 1 cut(s) 153
BssMI GATC 4 cut(s) 40, 291, 331, 404
Bst2UI CCWGG 1 cut(s) 389
Bst4CI ACNGT 1 cut(s) 269
BstC8I GCNNGC 1 cut(s) 361
BstDEI CTNAG 1 cut(s) 135
BstKTI GATC 4 cut(s) 43, 294, 334, 407
BstMBI GATC 4 cut(s) 40, 291, 331, 404
BstNI CCWGG 1 cut(s) 389
BstNSI RCATGY 1 cut(s) 363
BstSCI CCNGG 1 cut(s) 387
BstSFI CTRYAG 2 cut(s) 48, 265
BstX2I RGATCY 1 cut(s) 404
BstXI CCANNNNNNTGG 1 cut(s) 35
BstYI RGATCY 1 cut(s) 404
BsuRI GGCC 1 cut(s) 217
Cac8I GCNNGC 1 cut(s) 361
Csp6I GTAC 1 cut(s) 385
CviAII CATG 4 cut(s) 335, 360, 364, 424
CviJI RGCY 7 cut(s) 65, 89, 170, 181, 217, 318, 392
CviKI_1 RGCY 7 cut(s) 65, 89, 170, 181, 217, 318, 392
CviQI GTAC 1 cut(s) 385
DdeI CTNAG 1 cut(s) 135
DpnI GATC 4 cut(s) 42, 293, 333, 406
DpnII GATC 4 cut(s) 40, 291, 331, 404
Eco147I AGGCCT 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 177
EcoRII CCWGG 1 cut(s) 387
EcoT22I ATGCAT 2 cut(s) 361, 365
FaeI CATG 4 cut(s) 338, 363, 367, 427
FatI CATG 4 cut(s) 334, 359, 363, 423
FbaI TGATCA 2 cut(s) 291, 331
FblI GTMKAC 1 cut(s) 264
FspBI CTAG 2 cut(s) 393, 414
HaeIII GGCC 1 cut(s) 217
HapII CCGG 1 cut(s) 221
Hin1II CATG 4 cut(s) 338, 363, 367, 427
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 2 cut(s) 101, 420
HpaII CCGG 1 cut(s) 221
HphI GGTGA 3 cut(s) 50, 163, 388
Hpy166II GTNNAC 2 cut(s) 130, 265
Hpy188I TCNGA 1 cut(s) 69
Hpy188III TCNNGA 1 cut(s) 221
Hpy8I GTNNAC 2 cut(s) 130, 265
HpyAV CCTTC 2 cut(s) 133, 375
HpyCH4III ACNGT 1 cut(s) 269
HpyCH4V TGCA 2 cut(s) 359, 363
HpyF3I CTNAG 1 cut(s) 135
Hsp92II CATG 4 cut(s) 338, 363, 367, 427
Kpn2I TCCGGA 1 cut(s) 220
KpnI GGTACC 1 cut(s) 388
Ksp22I TGATCA 2 cut(s) 291, 331
Kzo9I GATC 4 cut(s) 40, 291, 331, 404
LpnPI CCDG 7 cut(s) 90, 134, 180, 199, 234, 374, 401
MaeI CTAG 2 cut(s) 393, 414
MaeIII GTNAC 1 cut(s) 209
MalI GATC 4 cut(s) 42, 293, 333, 406
MboI GATC 4 cut(s) 40, 291, 331, 404
MboII GAAGA 4 cut(s) 170, 173, 183, 187
MflI RGATCY 1 cut(s) 404
MhlI GDGCHC 1 cut(s) 342
MluCI AATT 2 cut(s) 109, 240
MnlI CCTC 4 cut(s) 228, 229, 297, 344
Mph1103I ATGCAT 2 cut(s) 361, 365
MroI TCCGGA 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 244
MspI CCGG 1 cut(s) 221
MspR9I CCNGG 1 cut(s) 389
MvaI CCWGG 1 cut(s) 389
NdeII GATC 4 cut(s) 40, 291, 331, 404
NlaIII CATG 4 cut(s) 338, 363, 367, 427
NlaIV GGNNCC 2 cut(s) 386, 406
NmeAIII GCCGAG 1 cut(s) 41
NsiI ATGCAT 2 cut(s) 361, 365
NspI RCATGY 1 cut(s) 363
PaeI GCATGC 1 cut(s) 363
PceI AGGCCT 1 cut(s) 217
PdmI GAANNNNTTC 1 cut(s) 244
PfeI GAWTC 2 cut(s) 101, 420
Psp6I CCWGG 1 cut(s) 387
PspGI CCWGG 1 cut(s) 387
PspN4I GGNNCC 2 cut(s) 386, 406
PsuI RGATCY 1 cut(s) 404
RsaI GTAC 1 cut(s) 386
RsaNI GTAC 1 cut(s) 385
Sau3AI GATC 4 cut(s) 40, 291, 331, 404
ScrFI CCNGG 1 cut(s) 389
SduI GDGCHC 1 cut(s) 342
SetI ASST 8 cut(s) 37, 49, 91, 172, 183, 320, 386, 390
SfcI CTRYAG 2 cut(s) 48, 265
SphI GCATGC 1 cut(s) 363
Sse9I AATT 2 cut(s) 109, 240
SseBI AGGCCT 1 cut(s) 217
SspMI CTAG 2 cut(s) 393, 414
StuI AGGCCT 1 cut(s) 217
StyD4I CCNGG 1 cut(s) 387
TaaI ACNGT 1 cut(s) 269
TasI AATT 2 cut(s) 109, 240
TfiI GAWTC 2 cut(s) 101, 420
TspDTI ATGAA 2 cut(s) 17, 412
XapI RAATTY 1 cut(s) 240
XceI RCATGY 1 cut(s) 363
XmiI GTMKAC 1 cut(s) 264
XmnI GAANNNNTTC 1 cut(s) 244
XspI CTAG 2 cut(s) 393, 414
Zsp2I ATGCAT 2 cut(s) 361, 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.